Rv0667 - c.3153G>C


Drug resistance types
121 Sensitive 27 RR-TB 81 HR-TB 27 MDR-TB 12 Pre-XDR-TB 1 XDR-TB 138 Other
lineage Counts
lineage Count
lineage4.9 220
lineage4.7 1
lineage1.1.3.1 1
3
lineage1.1.2 2
La1.8.1 3
lineage4.1.1.3;lineage4.9 2
La1.7;lineage4.9 5
lineage4.2.1.1;lineage4.3.3 1
lineage2.2.1 28
lineage4.1.1.2 1
lineage3.1.3 1
lineage4.8;lineage4.9 2
lineage4.4.1.1.1 2
lineage4.2.1 2
lineage6.1.3 2
lineage2.2.1.1 2
lineage4.3.4.2 1
La3;M.canetti;lineage4.9 1
lineage4.8 9
lineage2.2.1.2 1
lineage4.3.2.1 5
lineage4.1.1.3 5
lineage4.3;lineage4.9 1
lineage4.1.2.1 10
lineage4.3.3;lineage4.8 4
lineage4.5 2
La3;lineage4.9 8
lineage1.2.2.2 1
lineage3 10
lineage4.9;lineage6.3 1
lineage4.4.1.1 1
lineage4.3.3 5
La1.7 2
La1.7;lineage4.3.4.1 1
La1.2 1
lineage1.1.2;lineage6.2.3 1
lineage1.1.1.1 1
lineage4 9
lineage2.2.1;lineage4.9 3
La3;lineage4 1
M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 1
lineage4.1.1.1 2
lineage2.2.1;lineage4 2
lineage1.2.1.1 1
lineage4.3.4.2.1 6
lineage2.2;lineage4.9 1
La1.7;lineage3.1;lineage4 1
lineage2.2.2 1
La1.2.BCG;lineage4.9 1
La1;lineage4.9 1
La1.7;M.canetti;lineage4.9 2
lineage2;lineage4.9 1
lineage2.2;lineage4 1
lineage1.1.2;lineage4.1.2.1;lineage4.1.3 1
lineage3.1.1 1
La1;lineage4.1.2 1
lineage4.1;lineage4.9 2
lineage5.1.2 1
La3;lineage2.1;lineage4.9;lineage6.3 1
lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 1
lineage1.1.1;lineage4 1
lineage2.2.1;lineage4.4.2 1
La1.6 1
lineage4.3.4.1 2
lineage4.1.2 1
lineage4.8.1 1
lineage1;lineage4.9 1
La1.7.1 1
lineage4.1.2.1;lineage4.4.1.1 1
lineage1.1.1 1
La1.2.BCG 2
lineage4.4.1.2 1
lineage3;lineage4.9 1
lineage5.1.4 1
spoligotype Counts
spoligotype Count
None 407
Geographic prevalence
Country level data for this variant is available for 3 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR3675209 Sensitive lineage4.9 None
ERR349266 Other lineage4.9 None
SRR7496523 Other lineage4.7 None
SRR5341469 HR-TB lineage4.9 None
ERR971389 Other lineage4.9 None
ERR363446 Other lineage4.9 None
ERR8479578 HR-TB lineage1.1.3.1 None
ERR1063896 HR-TB None
ERR4796577 HR-TB None
ERR245675 Sensitive lineage1.1.2 None
SRR1792022 Other La1.8.1 None
ERR3797029 Other lineage4.9 None
SRR1175500 Sensitive lineage4.1.1.3;lineage4.9 None
ERR6359074 HR-TB lineage4.9 None
ERR4797264 HR-TB lineage4.9 None
ERR736872 HR-TB lineage4.9 None
SRR3675385 Other La1.7;lineage4.9 None
ERR779852 HR-TB lineage4.9 None
ERR4821172 RR-TB lineage4.9 None
ERR867542 HR-TB lineage4.2.1.1;lineage4.3.3 None
ERR4831616 MDR-TB lineage2.2.1 None
ERR4818252 HR-TB lineage4.1.1.2 None
ERR2513121 Sensitive lineage3.1.3 None
ERR4024991 HR-TB lineage4.8;lineage4.9 None
SRR1181215 Sensitive lineage4.4.1.1.1 None
SRR6045664 Other lineage4.2.1 None
SRR5341298 Other lineage4.9 None
SRR10808668 Other lineage2.2.1 None
ERR363421 Other lineage4.9 None
ERR9787336 RR-TB lineage6.1.3 None
ERR702405 HR-TB lineage4.9 None
ERR502481 RR-TB lineage4.9 None
ERR3797079 Sensitive lineage4.9 None
SRR6046839 Other lineage4.9 None
SRR6079962 HR-TB lineage2.2.1.1 None
ERR9786592 Other lineage4.3.4.2 None
SRR11972425 Pre-XDR-TB lineage2.2.1 None
ERR4188247 HR-TB lineage4.9 None
ERR473277 HR-TB La3;M.canetti;lineage4.9 None
SRR1791747 Other La1.8.1 None
SAMEA3501073 RR-TB lineage4.8 None
SRR3675501 Other La1.7;lineage4.9 None
SRR3675492 Other La1.7;lineage4.9 None
ERR4799989 Pre-XDR-TB lineage2.2.1.2 None
ERR363474 Sensitive lineage4.9 None
ERR2513229 MDR-TB lineage2.2.1 None
SRR7535082 Other lineage4.9 None
SRR5341341 Pre-XDR-TB lineage2.2.1 None
ERR926154 Sensitive lineage4.9 None
SRR6046564 Sensitive lineage4.9 None
SRR5341300 HR-TB lineage4.9 None
ERR369163 Other lineage4.9 None
ERR323115 Sensitive lineage4.9 None
ERR369161 Sensitive lineage4.9 None
SRR12708407 HR-TB lineage4.3.2.1 None
ERR4816729 Sensitive lineage4.9 None
SRR10315751 MDR-TB lineage4.8 None
SRR12420587 MDR-TB lineage2.2.1 None
SRR1183965 Sensitive lineage4.9 None
ERR970449 RR-TB lineage4.1.1.3 None
ERR036207 Other lineage4.3;lineage4.9 None
ERR349330 Sensitive lineage4.9 None
SRR1180312 Sensitive lineage4.9 None
SRR12708414 HR-TB lineage2.2.1 None
SRR15315797 RR-TB lineage2.2.1 None
SRR7236177 Other La1.8.1 None
ERR2513438 Sensitive lineage4.1.2.1 None
SRR1062920 MDR-TB lineage4.3.3;lineage4.8 None
ERR124636 HR-TB lineage4.9 None
ERR4820043 Sensitive lineage4.1.2.1 None
ERR4816548 HR-TB lineage4.5 None
ERR5917985 MDR-TB lineage2.2.1 None
SRR3675267 Other La1.7;lineage4.9 None
SRR5341308 HR-TB lineage4.9 None
ERR3797063 Other La3;lineage4.9 None
SRR10315567 HR-TB lineage2.2.1 None
SRR3675580 Sensitive lineage4.9 None
ERR502478 RR-TB lineage4.9 None
SRR12708411 HR-TB lineage1.2.2.2 None
SRR6511621 HR-TB lineage4.9 None
ERR349264 Other lineage4.9 None
ERR2514552 Sensitive lineage3 None
SRR1175474 Other lineage4.9 None
SRR6045371 Other lineage4.9 None
ERR212121 HR-TB lineage4.9;lineage6.3 None
SRR6046376 Other lineage3 None
SRR1183054 Sensitive lineage4.9 None
SRR12708398 Sensitive lineage4.4.1.1 None
SRR1180977 Sensitive lineage4.9 None
SRR1175513 Sensitive lineage4.9 None
ERR108471 HR-TB lineage4.9 None
SRR9613550 HR-TB lineage4.1.2.1 None
SRR1172885 HR-TB lineage4.9 None
SRR12708384 Sensitive lineage4.9 None
SRR9971112 HR-TB lineage2.2.1 None
SRR12708409 HR-TB lineage4.3.3 None
SRR3675387 Other lineage4.9 None
SRR5341296 Sensitive lineage4.9 None
SRR3618864 Pre-XDR-TB lineage2.2.1 None
ERR3797064 Other La3;lineage4.9 None
ERR4830353 HR-TB La1.7 None
ERR4831621 MDR-TB lineage2.2.1.1 None
ERR11465802 Other La1.7;lineage4.3.4.1 None
SRR12708372 Sensitive lineage4.9 None
SRR5341437 Sensitive lineage4.9 None
ERR4769418 Other La1.2 None
SRR1180444 Sensitive lineage4.9 None
ERR4797313 Sensitive lineage2.2.1 None
SRR3675514 Sensitive lineage4.9 None
SRR6045050 Sensitive lineage4.3.2.1 None
ERR363453 Other lineage4.9 None
ERR3324368 RR-TB lineage1.1.2;lineage6.2.3 None
SRR5341455 Sensitive lineage4.9 None
SRR1180399 Sensitive lineage4.9 None
ERR363447 Other lineage4.9 None
SRR1158918 Other lineage4.9 None
SRR12708392 Other lineage2.2.1 None
ERR752012 HR-TB lineage1.1.1.1 None
ERR369156 Sensitive lineage4.9 None
SRR3675247 Other lineage4.9 None
ERR373947 Other lineage4.9 None
SRR5341467 Other lineage4.9 None
SRR5341425 Other lineage4.9 None
ERR502470 RR-TB lineage4.9 None
SRR6045191 Sensitive lineage4.9 None
SRR1167271 MDR-TB lineage4.1.1.3 None
ERR2517475 Other lineage4 None
ERR502510 HR-TB lineage4.9 None
ERR363500 Other lineage4.9 None
SRR6045892 Sensitive lineage4.9 None
ERR2446382 Other lineage4 None
SRR1181390 Sensitive lineage2.2.1;lineage4.9 None
SRR3675260 Sensitive lineage4.9 None
SRR6046737 Other lineage4.9 None
ERR926155 Other lineage4.9 None
ERR3283021 MDR-TB lineage4.9 None
ERR502511 HR-TB lineage4.9 None
ERR3283028 Other La3;lineage4 None
ERR108125 RR-TB lineage4.9 None
ERR11252599 Other M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 None
SRR12708416 Sensitive None
SRR6045795 Other lineage2.2.1 None
ERR349300 Other lineage4.9 None
ERR137286 Other lineage4.9 None
ERR3806850 HR-TB lineage4.1.2.1 None
ERR4816113 Sensitive lineage4.1.1.1 None
SRR9971114 Other lineage2.2.1 None
ERR4817998 Other lineage3 None
SRR1180300 Sensitive lineage4.9 None
ERR3797087 Sensitive lineage4.9 None
SRR1181403 Other lineage4.9 None
ERR4769417 Pre-XDR-TB lineage4.9 None
SRR20632814 Sensitive lineage4.9 None
SRR1180345 Other lineage4.9 None
ERR2513724 Sensitive lineage4.3.2.1 None
SRR1175496 Sensitive lineage4.9 None
ERR369157 Sensitive lineage4.9 None
ERR4798099 HR-TB lineage4.9 None
ERR3275450 Other lineage4 None
ERR363499 Other lineage4.9 None
ERR369151 Other lineage4.9 None
ERR400320 Sensitive lineage4.9 None
SRR20970043 MDR-TB lineage2.2.1 None
SRR1159378 Other lineage4.9 None
SRR3675265 Other lineage4 None
ERR502943 Sensitive lineage2.2.1;lineage4 None
ERR3797065 RR-TB lineage4.9 None
SRR16156804 Sensitive lineage4.9 None
ERR6866639 HR-TB lineage4.9 None
SRR6045832 Other lineage4.9 None
SRR10315466 RR-TB lineage2.2.1 None
ERR4821686 Sensitive lineage4.1.2.1 None
ERR4178309 Other lineage4.1.2.1 None
ERR4769433 RR-TB lineage4.9 None
ERR3283031 Other La3;lineage4.9 None
ERR4814734 Other lineage1.2.1.1 None
ERR926162 Sensitive lineage4.9 None
ERR6866125 Sensitive lineage4.1.2.1 None
ERR4831617 MDR-TB lineage2.2.1 None
ERR245794 HR-TB lineage4.3.4.2.1 None
ERR736848 Other lineage4.9 None
ERR926157 Other lineage4.9 None
SRR6046245 Other lineage4.9 None
ERR2512770 Sensitive lineage4.2.1 None
SRR1184021 Sensitive lineage4.9 None
SRR3675210 Sensitive lineage4.9 None
ERR4815550 Other lineage2.2;lineage4.9 None
ERR2446509 Other lineage3 nl
SRR5341345 Sensitive lineage4.9 None
SRR1175487 Sensitive lineage4.9 None
ERR9787256 Other lineage6.1.3 None
ERR4818904 Other lineage4.8 None
ERR736837 Pre-XDR-TB lineage4.9 None
ERR373946 Other lineage4.9 None
ERR1063883 HR-TB lineage4.9 None
ERR11466072 Sensitive lineage4.3.4.2.1 None
ERR363426 Sensitive lineage4.9 None
ERR4821655 HR-TB lineage4.9 None
SRR5341310 Other lineage1.1.2 None
SRR6046897 Sensitive lineage4.9 None
SRR1181349 Sensitive lineage4 None
SRR14801749 HR-TB lineage4.9 None
ERR405219 HR-TB La1.7;lineage3.1;lineage4 None
SRR1181283 Sensitive lineage4.9 None
ERR926158 Sensitive lineage4.9 None
ERR9119733 MDR-TB lineage2.2.1 None
SRR1175052 HR-TB lineage4.9 None
ERR4811031 Other lineage4.5 None
SRR12708370 Pre-XDR-TB lineage2.2.2 None
SRR1915481 Other La1.2.BCG;lineage4.9 None
ERR400336 Sensitive lineage4.9 None
SRR7496471 Sensitive lineage4 None
ERR502473 RR-TB lineage4.9 None
ERR4811030 Other lineage4.9 None
ERR3283011 Other La3;lineage4.9 None
SRR5341461 HR-TB lineage4.9 None
ERR349299 Other lineage4.9 None
SRR9970981 RR-TB lineage4.3.2.1 None
SRR10808805 Other La1;lineage4.9 None
SRR3675318 Other lineage4.9 None
SRR6046196 Other La1.7;M.canetti;lineage4.9 None
ERR1035122 HR-TB lineage4.9 None
SRR1180355 Sensitive lineage4.9 None
SRR3675235 HR-TB lineage4.9 None
ERR4815471 HR-TB lineage4.9 None
SRR12708413 HR-TB lineage4.1.1.3 None
ERR926159 Sensitive lineage4.9 None
SRR6045706 Other lineage4.9 None
SRR1180946 Sensitive lineage2;lineage4.9 None
ERR4796254 Other lineage4.9 None
SRR8692863 Other lineage2.2;lineage4 None
ERR502474 RR-TB lineage4.9 None
SRR10808399 Sensitive lineage4.9 None
ERR4816100 Sensitive lineage1.1.2;lineage4.1.2.1;lineage4.1.3 None
SRR5341453 Other lineage4.9 None
ERR4813263 MDR-TB lineage4.8 None
ERR978766 RR-TB lineage4.8 None
ERR6359069 HR-TB lineage4.9 None
ERR978767_ERR978765_ERR978766 RR-TB lineage4.8 None
ERR4812155 Other lineage4.9 None
ERR369160 Sensitive lineage4.9 None
ERR363445 Other lineage4.9 None
ERR2851356 Sensitive lineage4.9 None
ERR4769444 HR-TB lineage4.9 None
ERR363502 Other lineage4.9 None
ERR363509 Sensitive lineage4.9 None
SRR19295647 HR-TB lineage4.9 None
SRR6044876 Sensitive lineage4.9 None
SRR3675246 Other lineage4.9 None
ERR4178226 Sensitive lineage4 None
ERR9285979 RR-TB lineage3.1.1 None
SRR3619841 Pre-XDR-TB lineage2.2.1 None
SRR1180391 Sensitive lineage4.9 None
SRR9970978 Other La1;lineage4.1.2 None
SRR1184114 Sensitive lineage2.2.1;lineage4.9 None
SRR6044819 Sensitive lineage4.9 None
SRR6046259 Sensitive lineage4.9 None
ERR4798431 Other lineage4.1;lineage4.9 None
ERR400538 RR-TB lineage5.1.2 None
SRR8758877 MDR-TB lineage4.1.1.1 None
SRR11349186 MDR-TB lineage4.3.3 None
SRR3675517 Other La3;lineage2.1;lineage4.9;lineage6.3 None
ERR6358991 HR-TB lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 None
ERR4815310 Other lineage2.2.1;lineage4.9 None
ERR1023509 MDR-TB lineage4.9 None
ERR6865513 Other lineage4.1.2.1 None
ERR736834 HR-TB lineage4.9 None
ERR5987263 MDR-TB lineage2.2.1 None
ERR6866022 HR-TB lineage4.8;lineage4.9 None
ERR4831638 Sensitive lineage1.1.1;lineage4 None
SRR2010299 MDR-TB lineage2.2.1 None
SRR1175507 Sensitive lineage4.1.1.3;lineage4.9 None
SRR1175506 Sensitive lineage4.9 None
ERR363479 Other lineage4.9 None
SRR3675505 Other La1.7;M.canetti;lineage4.9 None
SRR6045503 Other lineage4.9 None
SRR1180410 Sensitive lineage4.9 None
ERR926161 Sensitive lineage4.9 None
ERR369159 Other lineage4.9 None
ERR736856 HR-TB lineage4.9 None
ERR4831620 MDR-TB lineage2.2.1 None
ERR4831841 HR-TB lineage2.2.1;lineage4.4.2 None
ERR363456 Sensitive lineage4.9 None
SRR28351580 Pre-XDR-TB lineage3 None
ERR6358979 HR-TB lineage4.9 None
SRR1180406 Sensitive lineage4.9 None
ERR369162 Other lineage4.9 None
ERR4797474 Other lineage4.9 None
SRR6046611 Sensitive lineage4.9 None
ERR363449 Other lineage4.9 None
SRR1140574 MDR-TB lineage4.3.3;lineage4.8 None
SRR10993951 RR-TB La1.6 None
SRR12708418 HR-TB lineage2.2.1 None
ERR373945 Other lineage4.9 None
SRR1175472 RR-TB lineage4.3.4.1 None
ERR4819357 Sensitive lineage4.9 None
SRR11349145 Pre-XDR-TB lineage4.4.1.1.1 None
ERR9786911 HR-TB lineage4.1.2.1 None
ERR369158 Other lineage4.9 None
ERR2693252 HR-TB lineage4.9 None
SRR1180375 Sensitive lineage4.9 None
ERR4816964 HR-TB lineage4.9 None
SRR1180420 Sensitive lineage4.9 None
SRR3675292 Sensitive lineage4.9 None
ERR349296 Sensitive lineage4.9 None
SRR9970980 HR-TB lineage4.1.2 None
ERR4817204 Other lineage4.9 None
SRR9971041 MDR-TB lineage4.3.3 None
ERR926165 Other lineage4.9 None
ERR3797048 Other La3;lineage4.9 None
SRR1181402 Sensitive lineage4.9 None
SRR6046141 Other lineage4.9 None
ERR6866410 HR-TB lineage4.9 None
ERR926156 Other lineage4.9 None
ERR4872322 Pre-XDR-TB lineage2.2.1 None
ERR2513259 Other lineage3 None
ERR363506 Sensitive lineage4.9 None
SRR3675455 Sensitive lineage4.9 None
SRR3675473 Sensitive lineage4.9 None
ERR176741 Other lineage4.9 None
ERR2229234 Sensitive lineage4.8 None
ERR176518 Sensitive lineage4.3.4.2.1 None
SRR1049676 MDR-TB lineage4.3.3;lineage4.8 None
SRR5341365 Pre-XDR-TB lineage3 None
SRR9971150 RR-TB lineage4.8.1 None
ERR3275709 HR-TB lineage3 nl
SRR5341384 HR-TB lineage4.9 None
SRR5818647 Other lineage4.3.4.2.1 None
ERR349265 Other lineage4.9 None
ERR1063855 Other lineage4.9 None
SRR12708415 HR-TB lineage2.2.1 None
SRR1181351 Sensitive lineage4.9 None
SRR1181237 Sensitive lineage2.2.1;lineage4 None
ERR400345 Other lineage4.9 None
ERR978765 RR-TB lineage4.8 None
ERR6865502 Sensitive lineage4 None
ERR323066 HR-TB lineage4.9 None
SRR11662694 Other lineage4.9 None
ERR6359066 HR-TB lineage4.9 None
ERR4797350 Sensitive lineage1;lineage4.9 None
SRR12708399 MDR-TB lineage4.3.4.2.1 None
ERR4816470 HR-TB lineage3 None
SRR21469200 Other La1.7.1 None
SRR1175508 Sensitive lineage4.9 None
SRR1049677 MDR-TB lineage4.3.3;lineage4.8 None
ERR926160 Other lineage4.9 None
ERR1063846 HR-TB lineage4.9 None
SRR3675477 Sensitive lineage4.9 None
ERR400326 Other lineage4.9 None
SRR1180996 Other lineage4.9 None
SRR6789624 HR-TB lineage4.1.1.3 None
SRR9971270 RR-TB lineage2.2.1 None
SRR1172807 Sensitive lineage4.9 None
SRR5341323 Sensitive lineage4.9 None
ERR323062 HR-TB lineage4.9 None
ERR3283047 Sensitive La3;lineage4.9 None
ERR3273109 HR-TB lineage4 None
ERR3275190 Other lineage3 nl
ERR363498 Other lineage4.9 None
SRR6046210 Other lineage4.9 None
SRR3675585 HR-TB lineage4.9 None
SRR3675522 Other lineage4.9 None
ERR926163 Other lineage4.9 None
SRR5341387 Other lineage4.9 None
SRR1181325 Sensitive lineage4.9 None
SRR3675488 Other La1.7;lineage4.9 None
SRR1180319 Sensitive lineage4.9 None
SRR1180250 Other lineage4.9 None
ERR4816904 Sensitive lineage4.1.2.1 None
ERR212114 Other lineage4.3.4.2.1 None
ERR176751 HR-TB lineage4.9 None
ERR978767 RR-TB lineage4.8 None
ERR4596910 Sensitive lineage4.9 None
SRR12708396 MDR-TB lineage4.3.2.1 None
SRR3675541 Sensitive lineage4.9 None
SRR3675553 Sensitive lineage4.9 None
SRR1049726 Other lineage4.1.2.1;lineage4.4.1.1 None
ERR3283014 Other La3;lineage4.9 None
ERR363490 Other lineage4.9 None
SRR12416842 HR-TB lineage4.9 None
SRR3675229 Sensitive lineage4.9 None
SRR6044875 Other lineage4.9 None
ERR926164 Other lineage4.9 None
ERR3797047 MDR-TB lineage4.9 None
ERR4817554 Other lineage1.1.1 None
SRR21677886 Sensitive lineage4.9 None
SRR3675547 Sensitive lineage4.9 None
SRR1175512 Sensitive lineage4.9 None
ERR4797184 HR-TB lineage4.9 None
SRR3675222 Other La1.7 None
SRR3675389 Other lineage4.9 None
SRR6044835 Other lineage4.9 None
SRR1915485 Other La1.2.BCG None
SRR1180413 Sensitive lineage4.9 None
ERR323056 HR-TB lineage4.4.1.2 None
ERR9992879 XDR-TB lineage4.3.3 None
ERR473323 HR-TB lineage4.9 None
SRR1175491 MDR-TB lineage4.3.4.1 None
SRR12708374 Sensitive lineage4.1;lineage4.9 None
ERR3283057 Sensitive La3;lineage4.9 None
SRR12708371 HR-TB lineage4.1.1.3 None
SRR12708419 Other lineage4.3.3 None
SRR5341396 Other lineage3;lineage4.9 None
SRR5341299 HR-TB lineage4.9 None
SRR1915487 Other La1.2.BCG None
ERR4819863 RR-TB lineage4.9 None
ERR2513283 Sensitive lineage5.1.4 None