EBG00000313339 - n.2245T>C


Drug resistance types
38 Sensitive 21 RR-TB 24 HR-TB 24 MDR-TB 18 Pre-XDR-TB 0 XDR-TB 172 Other
lineage Counts
lineage Count
lineage4.8 16
lineage3 42
lineage1.2.2.2 8
lineage1.1.3.1 4
lineage2.2.1 26
lineage3.1.2.1 2
lineage4.3.4.2.1 3
lineage4.6.2.2 3
lineage4.9 41
5
lineage4.4.1.1 7
lineage4.1.2.1 27
lineage4.1.1.3 8
lineage4.2.1 3
lineage6.1.3 1
lineage4.7 3
lineage1.1.1.1 2
lineage4.3.4.2 2
lineage4.2.2.2 4
lineage4.8.2 2
lineage3.1.2.2 2
lineage4 9
lineage3.1.1 9
lineage1.1.3.3 1
lineage4.1.4 1
lineage2.2.1.1 4
La1.3 5
lineage4.3.3 6
lineage4.3.4.1 2
La1.2 4
lineage1.2.1.2.1 2
La1.8.1 3
lineage2.2.2 2
lineage4.1.1 1
lineage4.9;La1.3 1
lineage4.4.2 3
lineage4.7;lineage4.3.4.2 1
lineage5.1.1 1
lineage4.2.2.1 1
lineage6 1
lineage1.2.1.2 2
La1.4 1
lineage1.1.2 8
lineage1.1.1 3
lineage4.1 1
lineage5 1
lineage4.6.1.2 1
lineage4.5 7
lineage4.3.2 1
lineage3.1.3 1
lineage4.1.2 2
lineage1.2.2.1 1
spoligotype Counts
spoligotype Count
None 297
Geographic prevalence
Country level data for this variant is available for 78 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR4820484 Other lineage4.8 None
SRR5341267 Pre-XDR-TB lineage3 None
ERR2514576 Other lineage4.8 gb
ERR2514613 Other lineage4.8 gb
SRR5341295 Sensitive lineage1.2.2.2 in
ERR4819864 RR-TB lineage1.1.3.1 None
ERR4820492 Other lineage2.2.1 None
ERR4820798 Other lineage3.1.2.1 gb
ERR4820889 Other lineage3 gb
ERR4819876 HR-TB lineage4.3.4.2.1 None
ERR2514896 Other lineage3 gb
ERR2514926 Other lineage4.6.2.2 gb
ERR4820026 Other lineage3 None
ERR4820073 Sensitive lineage4.9 None
ERR2515022 Sensitive lineage3 None
ERR4820130 Other lineage3 None
ERR4820107 RR-TB None
ERR4820161 Other lineage3 None
ERR4821119 Other lineage4.4.1.1 None
ERR4821769 Other lineage4.1.2.1 None
ERR4821007 RR-TB lineage1.2.2.2 None
ERR4821811 RR-TB lineage4.9 None
ERR4820193 Other lineage3 None
ERR4820944 Other lineage4.1.1.3 gb
ERR4821154 Other lineage2.2.1 gb
ERR4821136 Other lineage4.2.1 gb
SRR6045496 Other lineage6.1.3 None
ERR4821962 Other lineage4.1.1.3 gb
ERR4821519 Other lineage3 gb
ERR4821288 Other lineage4.7 None
ERR4822004 Other lineage1.1.1.1 gb
ERR4821417 Other lineage1.1.3.1 None
ERR4821477 Other lineage4.8 None
ERR4822138 Other lineage4.1.2.1 None
ERR4821579 Other lineage4.3.4.2 gb
ERR4821564 Sensitive lineage4.2.2.2 None
ERR4821551 Sensitive lineage4.9 None
ERR4822182 Sensitive lineage4.9 None
SRR6045726 Other lineage3 None
ERR4821725 Other lineage4.8.2 gb
SRR6046115 Sensitive lineage3 None
SRR6045642 Other lineage3.1.2.2 None
ERR4821616 Other lineage1.1.3.1 None
ERR4821718 Other lineage4.2.2.2 gb
SRR5709926 MDR-TB lineage2.2.1 None
SRR5818464 Other lineage4.9 None
SRR5818660 Sensitive lineage4.1.1.3 dj
SRR5818647 RR-TB lineage4.3.4.2.1 None
SRR6046152 Other lineage4.9 None
SRR6044904 Other lineage3 None
SRR5818663 Sensitive lineage4.1.2.1 dj
SRR5818684 Other lineage4.2.2.2 None
SRR6045899 Other lineage4.1.2.1 gb
SRR6045124 Other lineage4.9 None
SRR6045267 RR-TB lineage4 None
SRR6045159 Other lineage3.1.1 None
SRR6046250 Other lineage4.9 None
SRR6045312 Other lineage1.1.3.3 None
SRR6046508 Sensitive lineage3.1.2.2 gb
ERR4828962 Other lineage4.1.4 it
SRR6046433 Other lineage3 None
SRR6046442 Other lineage3 None
ERR4830493 MDR-TB lineage2.2.1 None
ERR4830864 MDR-TB lineage4.4.1.1 sz
SRR6152838 Other lineage2.2.1.1 ca
SRR6046737 Other lineage4.9 None
SRR6046602 HR-TB lineage4.1.2.1 gb
SRR6046612 Other lineage1.1.1.1 None
SRR6257097 Pre-XDR-TB lineage2.2.1 ru
SRR6982239 HR-TB lineage4.1.1.3 None
ERR3077969 Other La1.3 None
ERR502470 RR-TB lineage4.9 None
ERR3275190 Other lineage3 nl
SRR6982246 Sensitive lineage4 None
ERR4831863 HR-TB lineage2.2.1.1 None
SRR6832644 Other lineage4.3.3 None
SRR7131287 Other lineage2.2.1.1 None
ERR3275996 HR-TB lineage4.3.4.1 nl
SRR7851312 Other La1.2 None
SRR7517755 HR-TB lineage1.2.1.2.1 None
SRR7517777 MDR-TB lineage2.2.1 th
SRR7755654 Pre-XDR-TB lineage4.2.1 None
ERR323048 Pre-XDR-TB lineage4.9 None
SRR8600288 Other La1.8.1 None
SRR8651616 MDR-TB lineage2.2.1 None
ERR10796590 Other lineage4.9 None
DRR184903 Sensitive lineage2.2.2 None
ERR10796597 Other lineage4 None
ERR10796615 Other lineage4 None
ERR10796632 Other lineage4.3.3 None
ERR10796623 Other lineage4.1.1 None
ERR3283033 Sensitive lineage4.9 None
ERR108125 Pre-XDR-TB lineage4.9 None
ERR3797063 HR-TB None
ERR3283046 MDR-TB lineage4.9 None
ERR3797060 Other La1.8.1 None
ERR3797065 MDR-TB lineage4 None
ERR4024892 Sensitive lineage4.1.2.1 None
ERR4178161 Other lineage4.4.1.1 None
ERR4769433 Pre-XDR-TB lineage4.9 None
ERR4596904 MDR-TB lineage3.1.1 None
ERR4596944 MDR-TB lineage3.1.1 None
ERR4627369 Other La1.8.1 None
ERR4769419 Other lineage4.9 None
ERR4769417 Pre-XDR-TB lineage4.9 None
ERR4769418 Other La1.2 None
ERR4769453 Other La1.3 None
ERR4769472 Other lineage4.9 None
ERR4769495 Other La1.3 None
ERR4769493 Pre-XDR-TB lineage4.9;La1.3 None
ERR4769516 Other La1.3 None
ERR5866570 Pre-XDR-TB lineage2.2.1 None
ERR4769518 Sensitive lineage4.9 None
ERR4772206 Other La1.2 None
ERR4796351 MDR-TB lineage4.9 None
ERR4769517 Other La1.3 None
ERR4796257 Pre-XDR-TB lineage2.2.1 in
ERR4796941 MDR-TB lineage1.2.2.2 in
ERR4811101 Other lineage4.4.2 None
ERR6197024 RR-TB lineage4.9 None
ERR5917972 MDR-TB lineage4.4.1.1 za
ERR6197021 MDR-TB lineage4.7;lineage4.3.4.2 None
ERR6197022 Other lineage4.9 None
ERR6197034 Other lineage4.9 None
ERR6197026 RR-TB lineage4.9 None
ERR6197028 Other lineage4.9 None
ERR6197036 Other lineage4 None
ERR6197033 Other lineage4.7 None
ERR6865855 Sensitive lineage4.1.2.1 None
ERR6197038 HR-TB lineage4.9 None
ERR6197044 RR-TB lineage4.9 None
ERR6197041 MDR-TB lineage4.3.4.2 None
ERR6865446 Other lineage4.4.1.1 None
ERR909753 Other lineage5.1.1 None
ERR7737736 MDR-TB lineage2.2.1 None
ERR8665619 Pre-XDR-TB lineage2.2.1 None
ERR8774355 MDR-TB lineage2.2.1 None
ERR736820 MDR-TB lineage1.2.2.2 None
ERR7737918 MDR-TB lineage4.2.2.1 None
ERR9117747 HR-TB lineage4.8 None
ERR9787033 Sensitive lineage6 None
ERR9992784 Pre-XDR-TB lineage2.2.2 None
SRR11349180 MDR-TB lineage2.2.1 None
SRR10315558 Sensitive lineage2.2.1 None
SRR10214505 Sensitive lineage1.2.1.2 None
SRR1173385 Sensitive lineage4.9 None
SRR11349211 Pre-XDR-TB lineage4.3.3 None
SRR1172987 HR-TB lineage4.9 None
SRR1173515 HR-TB lineage4.9 None
SRR1181130 Other lineage4.1.1.3 None
SRR1184308 Sensitive lineage4.9 None
SRR12006547 Sensitive lineage1.2.1.2.1 None
SRR1196545 HR-TB lineage4.9 None
SRR13199734 Other La1.2 None
SRR18003031 HR-TB lineage2.2.1 None
SRR16156188 HR-TB lineage4.9 None
SRR16278274 Other La1.4 None
SRR14334194 Pre-XDR-TB lineage2.2.1 None
SRR14801325 Pre-XDR-TB lineage4.2.1 None
SRR15522850 HR-TB lineage1.1.2 None
SRR16156775 Other lineage4.9 None
SRR16156804 RR-TB lineage4.9 None
SRR18213721 Other lineage4.8 None
ERR4815278 Other lineage4.8 None
SRR18909918 Other lineage2.2.1.1 None
SRR20969542 Other lineage4.4.2 None
SRR21240055 Other lineage4.1.2.1 None
SRR21658550 Other lineage1.1.1 None
SRR22424765 MDR-TB lineage4 None
SRR6207283 Sensitive lineage4.3.3 None
SRR18715102 MDR-TB lineage2.2.1 None
SRR20969475 Other lineage1.2.1.2 None
ERR4815143 HR-TB lineage4.2.2.2 None
ERR4815613 Other lineage3 None
ERR4814415 Other lineage3.1.1 None
ERR4815310 Other None
ERR4814362 Other lineage4.8 None
ERR4815714 Sensitive lineage4.1.2.1 gb
ERR4815783 Other lineage4.1.2.1 gb
ERR4814610 Sensitive lineage3 None
ERR4814617 Other lineage1.1.3.1 None
ERR4814623 Other lineage4.8 None
ERR4814801 Other lineage4.8 gb
ERR4812763 Other lineage2.2.1 None
SRR8003011 MDR-TB lineage4.8 in
ERR4814994 HR-TB lineage2.2.1 gb
ERR4815502 Other lineage4.1 None
ERR4814821 Other lineage2.2.1 None
ERR4815517 Other lineage1.2.2.2 None
ERR4815550 Other lineage4 None
SRR3675245 Other lineage4.1.2.1 None
ERR176580 Sensitive lineage4.3.4.2.1 None
ERR4814905 Other lineage4.8 gb
ERR4814976 Other lineage4.9 None
ERR4815022 Other lineage3.1.2.1 None
ERR4815065 Other lineage4.1.2.1 gb
ERR4815101 Other lineage3 gb
ERR4816928 HR-TB lineage1.2.2.2 None
ERR4815849 Other lineage3.1.1 None
ERR4815836 Other lineage4.8.2 None
ERR4816184 Other lineage4.1.2.1 None
ERR4816967 RR-TB lineage5 None
ERR4817464 Other lineage3.1.1 None
ERR4815898 Other lineage3 None
ERR4816982 Other lineage4 None
ERR4816988 Other lineage3 gb
ERR4816283 Other lineage4.1.2.1 None
ERR4817055 Other lineage4.1.2.1 None
ERR4816186 Sensitive lineage3 gb
ERR4816249 Other lineage1.1.2 gb
ERR4816397 Other lineage1.1.2 None
ERR4816322 Other lineage4.9 None
ERR4817070 Other lineage1.1.2 None
ERR4816310 HR-TB lineage4.6.1.2 None
ERR2446509 Other lineage3 nl
ERR4816417 Other lineage4.9 None
ERR4817110 Other lineage4.1.1.3 None
ERR4817109 Other lineage3 None
ERR4816569 Other lineage4.3.3 gb
ERR2229198 MDR-TB lineage4.8 None
ERR4817131 Pre-XDR-TB None
ERR4816548 MDR-TB lineage4.5 None
ERR2179662 Sensitive lineage4.5 cn
ERR4816571 Other lineage1.1.2 None
ERR4816779 Other lineage3 gb
ERR4816610 RR-TB lineage4.3.3 None
ERR4816677 Other lineage4.5 None
ERR4816702 RR-TB lineage4.6.2.2 None
ERR4816654 Sensitive lineage3.1.1 gb
ERR4817189 Other lineage4.7 None
ERR4816756 RR-TB None
ERR4817497 Other lineage1.1.2 None
ERR4816868 Other lineage4.4.1.1 None
ERR4817434 Other lineage3 None
ERR4816833 Other lineage4.1.1.3 None
ERR4816852 Other lineage4.9 None
ERR4816782 Other lineage4.1.2.1 None
ERR4816831 Other lineage4.1.2.1 None
ERR4818698 HR-TB lineage2.2.1 gb
ERR4816883 Other lineage4.5 None
ERR4817306 Other lineage3 gb
ERR4817735 Other lineage4.8 None
ERR4817670 Sensitive lineage4.8 gb
ERR4818646 Sensitive lineage4.1.2.1 None
ERR2512986 Other lineage3 None
ERR4817964 RR-TB lineage4.1.2.1 gb
ERR2510654 Pre-XDR-TB lineage2.2.1 it
ERR4817917 Other lineage2.2.1 None
ERR4818726 Other lineage4.1.2.1 None
ERR4817941 Other lineage4.8 gb
ERR4817948 Other lineage3 gb
ERR2512599 Other lineage3 gb
ERR2179696 Sensitive lineage4.4.2 cn
ERR4818831 Other lineage3 None
ERR4818261 Other lineage1.1.2 None
ERR4818272 Other lineage4.3.2 None
ERR2513589 Other lineage3.1.3 None
ERR3276144 Other lineage3 nl
ERR4818232 Other lineage4.1.2 gb
ERR4818265 Other lineage4.1.2.1 None
ERR4818283 Sensitive lineage4.5 gb
SRR1723899 Sensitive lineage4.5 cn
ERR2512660 Sensitive lineage3 gb
ERR4818432 HR-TB lineage4.5 gb
ERR2513273 Other lineage4.1.2.1 None
ERR4818476 HR-TB lineage4.6.2.2 gb
ERR2503533 Other lineage4.1.2.1 fi
ERR4818538 Other lineage3 gb
ERR4818507 RR-TB lineage4.1.2.1 None
ERR4818545 Other lineage4.1.2 gb
ERR4817554 Other lineage1.1.1 None
ERR2512841 HR-TB lineage2.2.1 gb
ERR4818952 Other lineage3 None
ERR2513509 Sensitive lineage3 gb
ERR4819175 Other lineage4.1.1.3 gb
ERR4817619 Other lineage4.1.2.1 gb
ERR4820230 Other lineage4.1.2.1 gb
ERR2513657 Other lineage1.2.2.2 gb
ERR4819171 Sensitive lineage1.2.2.2 gb
ERR4819203 RR-TB lineage1.2.2.1 None
SRR5153833 Other lineage2.2.1 None
ERR2513910 Other lineage3 gb
ERR4819265 HR-TB lineage4.3.4.1 None
ERR4820723 RR-TB lineage4.4.1.1 None
ERR4820290 Other lineage3 None
ERR4820410 Pre-XDR-TB lineage3.1.1 None
ERR4820746 RR-TB lineage3 None
ERR4819314 Other lineage1.1.1 None
ERR4819425 Other lineage3 gb
ERR4820335 Other lineage4.1.2.1 None
ERR2514215 Other lineage2.2.1 gb
ERR4819503 Other lineage3 None
ERR4819528 RR-TB lineage3 None
ERR4819533 Other lineage1.1.2 None
ERR4819684 Sensitive lineage3 gb
ERR2514533 Other lineage4.9 None
ERR4820787 Other lineage3.1.1 gb