Rv1630 - c.753G>C
Drug resistance types
60 Sensitive
53 RR-TB
43 HR-TB
37 MDR-TB
14 Pre-XDR-TB
0 XDR-TB
104 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9 | 94 |
| lineage4.3.2.1 | 4 |
| lineage4.1.2.1 | 7 |
| lineage2.2.1 | 31 |
| lineage3 | 11 |
| La3;lineage4.9 | 8 |
| lineage4.8 | 14 |
| lineage4.4.1.1.1 | 4 |
| lineage3.1.1 | 2 |
| lineage3;lineage4.9 | 1 |
| lineage1.1.3 | 1 |
| lineage4.1.2 | 3 |
| lineage4.1.1.3 | 4 |
| lineage4.6.1.2 | 4 |
| lineage4.3.4.2.1 | 7 |
| lineage4.2;lineage4.8.1;lineage4.9 | 2 |
| lineage2;lineage4 | 1 |
| lineage2.2.1.1 | 5 |
| lineage4.5 | 2 |
| lineage1.1.2 | 1 |
| lineage3.1.2.1 | 5 |
| lineage4.8.1 | 2 |
| lineage4.4.1.1 | 5 |
| lineage4.2.1.1;lineage4.3.3 | 1 |
| lineage4.3.4 | 1 |
| lineage2.2.2 | 5 |
| lineage4.6.2.2 | 2 |
| lineage3;lineage4 | 2 |
| lineage4.2.1 | 3 |
| lineage4.3.3 | 7 |
| lineage4.1.1.1 | 3 |
| La1.7;lineage3.1;lineage4 | 1 |
| M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | 1 |
| lineage2.1;lineage4.9;lineage6.3 | 1 |
| lineage1.2.1.2 | 1 |
| La1.7;lineage4.9 | 3 |
| La1.7;lineage4.9;lineage7 | 3 |
| lineage4.3.1 | 1 |
| lineage4.2;lineage4.6.3;lineage4.9.1 | 2 |
| La1.7.X-unk4 | 1 |
| lineage4.2;lineage4.6.3;lineage4.9 | 1 |
| lineage4.9;lineage7 | 1 |
| lineage4.9.1 | 2 |
| lineage2.2.1;lineage4.9 | 3 |
| lineage4.7 | 2 |
| lineage4.2;lineage4.9 | 2 |
| lineage4.1.1.3.1 | 1 |
| lineage4.3.4.2 | 2 |
| La1.7.1 | 1 |
| lineage4.6.5 | 1 |
| lineage4.2.2.2 | 1 |
| M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 | 1 |
| lineage2.2;lineage4 | 2 |
| lineage1.1.3.1 | 1 |
| lineage4.2.2.1 | 1 |
| lineage4.4.2 | 1 |
| lineage1.2.2 | 2 |
| lineage4 | 3 |
| lineage3.1.2.1;lineage4.9 | 1 |
| lineage2.2.1.2;lineage7 | 1 |
| lineage4.2.1.1 | 1 |
| lineage2;lineage4.9 | 1 |
| lineage4.3.4.1 | 1 |
| lineage4.8.2;lineage4.9 | 1 |
| lineage1.2.1.2.1 | 1 |
| lineage4.4.1.2 | 1 |
| La1.7;lineage3;lineage4.9;lineage7 | 1 |
| lineage4.1 | 1 |
| La3;lineage4 | 1 |
| lineage4.6.3;lineage4.9 | 2 |
| 4 | |
| lineage4.3.2 | 1 |
| La3;M.canetti;lineage4.9 | 1 |
| lineage2.2;lineage4.9 | 1 |
| lineage4.1.3 | 1 |
| lineage2.2.1;lineage4 | 1 |
| La1.2;La1.8.1 | 1 |
| La2 | 1 |
| lineage2.1;lineage4.1.4;lineage4.9 | 1 |
| lineage5.1.1 | 1 |
| lineage5 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 311 |
Geographic prevalence
Country level data for this variant is available for 3 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR4596910 | Sensitive | lineage4.9 | None | SRR12708396 | MDR-TB | lineage4.3.2.1 | None | ERR4818646 | Sensitive | lineage4.1.2.1 | None | ERR3797081 | Sensitive | lineage4.9 | None | SRR9971112 | HR-TB | lineage2.2.1 | None | SRR1173281 | Other | lineage3 | None | ERR3797064 | Other | La3;lineage4.9 | None | ERR4817964 | RR-TB | lineage4.1.2.1 | gb | ERR978767_ERR978765_ERR978766 | RR-TB | lineage4.8 | None | SRR11342696 | MDR-TB | lineage4.4.1.1.1 | None | SRR6044876 | Sensitive | lineage4.9 | None | ERR4820410 | RR-TB | lineage3.1.1 | None | SRR1180444 | Sensitive | lineage4.9 | None | ERR4817584 | Other | lineage3;lineage4.9 | None | SRR5341293 | Sensitive | lineage4.9 | None | ERR4816093 | Other | lineage1.1.3 | None | SRR19303820 | RR-TB | lineage4.8 | None | SRR1175512 | Sensitive | lineage4.9 | None | ERR4820075 | Other | lineage4.1.2.1 | None | ERR10796598 | Other | lineage4.9 | None | SRR1180391 | Sensitive | lineage4.9 | None | SRR11342658 | RR-TB | lineage4.1.2 | None | SRR11342647 | MDR-TB | lineage4.1.1.3 | None | SRR1062880 | MDR-TB | lineage4.6.1.2 | None | SRR1180413 | Sensitive | lineage4.9 | None | ERR323044 | HR-TB | lineage4.3.4.2.1 | None | SRR6045785 | MDR-TB | lineage4.2;lineage4.8.1;lineage4.9 | None | ERR1023502 | MDR-TB | lineage2;lineage4 | None | ERR4814896 | Other | lineage2.2.1.1 | None | ERR4820151 | Other | lineage4.8 | None | ERR9786444 | Sensitive | lineage4.8 | None | ERR752229 | Other | lineage4.5 | None | SRR21733183 | RR-TB | lineage1.1.2 | None | SRR5341373 | Other | lineage4.9 | None | ERR4819011 | Other | lineage3.1.2.1 | None | SRR11342662 | MDR-TB | lineage4.8.1 | None | SRR1180300 | Sensitive | lineage4.9 | None | ERR4819948 | Other | lineage4.4.1.1 | None | ERR4769530 | RR-TB | lineage4.9 | None | ERR4821172 | RR-TB | lineage4.9 | None | ERR867542 | HR-TB | lineage4.2.1.1;lineage4.3.3 | None | SRR6046385 | Sensitive | lineage4.9 | None | SRR17567917 | RR-TB | lineage4.4.1.1 | None | ERR736817 | HR-TB | lineage4.3.4 | None | ERR4809333 | Pre-XDR-TB | lineage2.2.2 | None | ERR4815121 | HR-TB | lineage4.6.2.2 | None | SRR16156697 | RR-TB | lineage2.2.1 | None | SRR6046839 | Other | lineage4.9 | None | ERR4769554 | RR-TB | lineage4.9 | None | SRR16156804 | Sensitive | lineage4.9 | None | SRR22175249 | Pre-XDR-TB | lineage2.2.1 | None | ERR4818393 | RR-TB | lineage3;lineage4 | None | SRR6045832 | Other | lineage4.9 | None | ERR3797048 | Other | La3;lineage4.9 | None | SAMEA3501073 | RR-TB | lineage4.8 | None | SRR3675552 | Other | lineage4.9 | None | ERR2513229 | MDR-TB | lineage2.2.1 | None | ERR4816466 | HR-TB | lineage4.9 | None | SRR6046141 | Other | lineage4.9 | None | SRR18909918 | Other | lineage2.2.1.1 | None | ERR3283031 | Other | La3;lineage4.9 | None | ERR867575 | Other | lineage4.9 | None | ERR176741 | Other | lineage4.9 | None | ERR5908124 | Other | lineage4.8 | None | ERR867524 | Pre-XDR-TB | lineage4.2.1 | None | ERR4820019 | Other | lineage4.3.4.2.1 | None | ERR4816610 | Other | lineage4.3.3 | None | SRR11342682 | Other | lineage4.1.2 | None | SRR26399239 | Sensitive | lineage4.9 | None | ERR4818726 | Other | lineage4.1.2.1 | None | ERR736837 | Pre-XDR-TB | lineage4.9 | None | ERR4815909 | Other | lineage4.8 | None | SRR11342651 | MDR-TB | lineage4.1.1.1 | None | ERR978765 | RR-TB | lineage4.8 | None | ERR2229198 | Sensitive | lineage4.8 | None | ERR405219 | HR-TB | La1.7;lineage3.1;lineage4 | None | SRR12708414 | HR-TB | lineage2.2.1 | None | SRR15315797 | RR-TB | lineage2.2.1 | None | SRR11342660 | MDR-TB | lineage2.2.1 | None | SRR6046397 | RR-TB | M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | None | ERR4816548 | HR-TB | lineage4.5 | None | ERR4816470 | HR-TB | lineage3 | None | SRR23961558 | RR-TB | lineage2.1;lineage4.9;lineage6.3 | None | ERR9119733 | MDR-TB | lineage2.2.1 | None | ERR3797085 | Other | lineage4.9 | None | ERR867570 | RR-TB | lineage4.9 | None | SRR14801652 | HR-TB | lineage4.3.3 | None | ERR867523 | Pre-XDR-TB | lineage2.2.1 | None | SRR20969475 | Other | lineage1.2.1.2 | None | ERR2446566 | Other | lineage4.9 | None | SRR6046210 | Other | lineage4.9 | None | ERR405209 | Sensitive | La1.7;lineage4.9 | None | ERR10796578 | Other | lineage2.2.1 | None | SRR12708413 | HR-TB | lineage4.1.1.3 | None | SRR6046376 | Other | lineage3 | None | SRR1180977 | Sensitive | lineage4.9 | None | ERR3276170 | Other | lineage4.1.2.1 | nl | ERR4821704 | Other | lineage4.3.3 | None | SRR5341432 | Other | La1.7;lineage4.9;lineage7 | None | ERR978767 | RR-TB | lineage4.8 | None | ERR4829039 | RR-TB | lineage4.3.1 | None | SRR1172885 | HR-TB | lineage4.9 | None | ERR3283014 | Other | La3;lineage4.9 | None | ERR978766 | RR-TB | lineage4.8 | None | SRR10315556 | Sensitive | lineage2.2.1 | None | ERR867567 | RR-TB | lineage3 | None | SRR8217918 | HR-TB | lineage4.9 | None | SRR1181091 | Other | lineage2.2.1.1 | None | ERR3290633 | Other | lineage4.2;lineage4.6.3;lineage4.9.1 | None | ERR3797062 | RR-TB | lineage4.9 | None | ERR3445487 | Other | La1.7.X-unk4 | None | ERR5311097 | Other | lineage4.2;lineage4.6.3;lineage4.9 | None | ERR473332 | Other | lineage4.9 | None | ERR4831117 | HR-TB | lineage4.9;lineage7 | None | ERR3797086 | Sensitive | lineage4.9 | None | SRR1180399 | Sensitive | lineage4.9 | None | ERR4821408 | Sensitive | lineage4.1.2 | None | ERR3797046 | HR-TB | lineage4.9 | None | ERR11465189 | RR-TB | lineage4.9.1 | None | SRR6045191 | Sensitive | lineage4.9 | None | ERR4815310 | Other | lineage2.2.1;lineage4.9 | None | SRR1181390 | Sensitive | lineage2.2.1;lineage4.9 | None | SRR6046485 | Other | lineage4.9 | None | ERR3283006 | RR-TB | lineage4.9 | None | ERR4821222 | Other | lineage4.3.2.1 | None | SRR18002947 | MDR-TB | lineage2.2.1 | None | ERR473334 | HR-TB | lineage4.9 | None | SRR7496523 | Other | lineage4.7 | None | SRR6046026 | RR-TB | lineage4.2;lineage4.9 | None | SRR5007193 | RR-TB | lineage4.1.1.3.1 | None | ERR108125 | RR-TB | lineage4.9 | None | ERR3283025 | MDR-TB | La1.7;lineage4.9 | None | SRR6045795 | Other | lineage2.2.1 | None | ERR9786639 | Sensitive | lineage4.8 | None | ERR4819051 | Sensitive | lineage4.9 | None | ERR4818710 | Sensitive | lineage4.9 | None | ERR4822261 | RR-TB | lineage2.2.1 | None | SRR11342649 | MDR-TB | lineage4.3.3 | None | SRR11342673 | RR-TB | lineage4.3.4.2 | None | SRR1180345 | Other | lineage4.9 | None | SRR6045010 | Sensitive | lineage4.9 | None | SRR1180440 | Other | lineage4.9 | None | SRR11349145 | Pre-XDR-TB | lineage4.4.1.1.1 | None | ERR6359070 | Sensitive | lineage4.9 | None | ERR4818556 | Sensitive | lineage3 | None | SRR18003004 | Pre-XDR-TB | lineage2.2.2 | None | SRR1180375 | Sensitive | lineage4.9 | None | ERR11465665 | Other | lineage4.1.1.3 | None | SRR11972425 | Pre-XDR-TB | lineage2.2.1 | None | ERR3283055 | HR-TB | lineage4.9 | None | SRR1792478 | HR-TB | La1.7.1 | None | ERR4816717 | RR-TB | lineage3.1.2.1 | None | ERR7801175 | HR-TB | lineage4.6.5 | None | SRR1181402 | Sensitive | lineage4.9 | None | SRR11342687 | RR-TB | lineage4.2.2.2 | None | ERR4820266 | Sensitive | lineage3 | None | SRR5341400 | Sensitive | lineage4.9 | None | SRR12142339 | HR-TB | lineage2.2.1 | None | SRR18911231 | Sensitive | lineage4.1.1.3 | None | SRR1735596 | RR-TB | lineage4.9 | None | ERR6359045 | Other | M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 | None | SRR16156832 | RR-TB | lineage2.2;lineage4 | None | ERR4819772 | Other | lineage1.1.3.1 | None | SRR5341365 | Pre-XDR-TB | lineage3 | None | SRR5341313 | Other | La1.7;lineage4.9;lineage7 | None | SRR14782539 | MDR-TB | lineage4.2.1 | None | ERR4769508 | RR-TB | lineage4.9 | None | ERR4818624 | Other | lineage4.3.4.2.1 | None | SRR5818647 | Other | lineage4.3.4.2.1 | None | SRR7069800 | Other | lineage3.1.2.1 | None | SRR6045002 | RR-TB | lineage4.9 | None | SRR16149126 | MDR-TB | lineage4.2.2.1 | None | SRR26399490 | Sensitive | lineage4.9 | None | SRR20969542 | Other | lineage4.4.2 | None | ERR4818126 | Other | lineage1.2.2 | None | ERR4818988 | Other | lineage1.2.2 | None | SRR1180312 | Sensitive | lineage4.9 | None | ERR4829816 | RR-TB | lineage4.4.1.1 | None | SRR6045219 | HR-TB | lineage4.9 | None | ERR4819706 | MDR-TB | lineage4.3.4.2 | None | ERR6359066 | HR-TB | lineage4.9 | None | ERR3797063 | Other | La3;lineage4.9 | None | ERR9786986 | HR-TB | lineage4.1.2.1 | None | SRR1175052 | HR-TB | lineage4.9 | None | SRR10315567 | HR-TB | lineage2.2.1 | None | SRR7496471 | Sensitive | lineage4 | None | ERR4816425 | Other | lineage2.2.2 | None | SRR9970981 | RR-TB | lineage4.3.2.1 | None | ERR2027290 | Other | lineage3.1.2.1;lineage4.9 | None | ERR4819096 | Other | lineage4.4.1.1 | None | ERR9896153 | RR-TB | lineage4.4.1.1 | None | SRR11342693 | MDR-TB | lineage4.8.1 | None | ERR736875 | HR-TB | lineage4.9 | None | ERR3283047 | Sensitive | La3;lineage4.9 | None | SRR1173740 | Other | lineage3;lineage4 | None | SRR18549032 | HR-TB | lineage2.2.1.2;lineage7 | None | ERR4815811 | Other | lineage4.2.1.1 | None | ERR4815079 | RR-TB | lineage3 | None | ERR867541 | MDR-TB | lineage4.2.1 | None | ERR4769474 | HR-TB | lineage4.9 | None | SRR1180946 | Sensitive | lineage2;lineage4.9 | None | SRR1175513 | Sensitive | lineage4.9 | None | ERR736831 | Other | lineage4.9 | None | ERR4815901 | Other | lineage2.2.2 | None | ERR4819265 | HR-TB | lineage4.3.4.1 | None | ERR9119120 | Other | lineage4.8 | None | SRR5007168 | Other | lineage4.8.2;lineage4.9 | None | ERR4819640 | RR-TB | lineage4.6.2.2 | None | ERR4818522 | Other | lineage3 | None | SRR1180147 | RR-TB | lineage2.2.1.1 | None | ERR4821679 | Other | lineage4.3.3 | None | SRR1184114 | Sensitive | lineage2.2.1;lineage4.9 | None | SRR12708392 | Other | lineage2.2.1 | None | ERR4821214 | Other | lineage1.2.1.2.1 | None | SRR6044835 | Other | lineage4.9 | None | ERR294266 | MDR-TB | lineage4.2;lineage4.8.1;lineage4.9 | None | SRR1140712 | MDR-TB | lineage4.6.1.2 | None | ERR502470 | RR-TB | lineage4.9 | None | ERR323056 | HR-TB | lineage4.4.1.2 | None | SRR5341315 | Other | La1.7;lineage3;lineage4.9;lineage7 | None | ERR4820324 | Other | lineage4 | None | SRR1180446 | Other | lineage4.9 | None | ERR3283057 | Sensitive | La3;lineage4.9 | None | SRR1180172 | RR-TB | lineage2.2.1 | None | SRR17658565 | Pre-XDR-TB | lineage3 | None | ERR4815502 | Other | lineage4.1 | None | SRR1183106 | RR-TB | lineage2.2.1.1 | None | SRR6046737 | Other | lineage4.9 | None | SRR1183144 | RR-TB | lineage2.2.1 | None | ERR5987263 | MDR-TB | lineage2.2.1 | None | ERR867525 | Pre-XDR-TB | lineage2.2.1 | None | ERR3283026 | HR-TB | lineage4.2;lineage4.6.3;lineage4.9.1 | None | ERR1034634 | HR-TB | lineage4.9 | None | SRR6046594 | Other | lineage4.9 | None | ERR4818110 | Sensitive | lineage4.9 | None | SRR1735598 | RR-TB | lineage4.9 | None | ERR4800527 | MDR-TB | lineage2.2.1 | None | SRR11342644 | MDR-TB | lineage4.4.1.1.1 | None | SRR1180410 | Sensitive | lineage4.9 | None | ERR11465510 | Sensitive | lineage4.3.4.2.1 | None | ERR3283028 | Other | La3;lineage4 | None | ERR11252664 | Other | lineage2.2.1 | None | ERR11252558 | Other | lineage4.6.3;lineage4.9 | None | ERR4817069 | RR-TB | None | ERR4796577 | HR-TB | None | ERR212001 | HR-TB | None | ERR4817060 | Other | None | ERR4818407 | Other | lineage4.3.2 | None | SRR1180406 | Sensitive | lineage4.9 | None | ERR4808964 | RR-TB | lineage2.2.1 | None | ERR3797087 | Sensitive | lineage4.9 | None | SRR1181403 | Other | lineage4.9 | None | ERR4769417 | Pre-XDR-TB | lineage4.9 | None | SRR6046295 | MDR-TB | lineage4.2;lineage4.9 | None | SRR1181215 | Sensitive | lineage4.4.1.1.1 | None | ERR4769493 | Other | lineage4.9 | None | ERR161034 | HR-TB | lineage4.3.4.2.1 | None | ERR2512986 | Other | lineage3 | None | SRR1181256 | Other | lineage4.9 | None | SRR6046492 | Other | lineage4.9 | None | SRR1049582 | MDR-TB | lineage4.6.1.2 | None | ERR4816476 | Other | lineage3.1.2.1 | None | ERR3797065 | RR-TB | lineage4.9 | None | ERR245758 | Other | lineage4.9.1 | None | ERR473277 | HR-TB | La3;M.canetti;lineage4.9 | None | SRR26937107 | MDR-TB | lineage2.2.1 | None | SRR11342642 | MDR-TB | lineage4.1.1.1 | None | SRR5153091 | HR-TB | lineage4.3.3 | None | SRR5341422 | HR-TB | La1.7;lineage4.9;lineage7 | None | SRR18003047 | MDR-TB | lineage2.2.1 | None | SRR6045555 | Other | lineage4.9 | None | ERR4815550 | Other | lineage2.2;lineage4.9 | None | ERR9119669 | MDR-TB | lineage4.9 | None | ERR867573 | Other | lineage4.9 | None | ERR4596904 | MDR-TB | lineage3.1.1 | None | SRR11342671 | RR-TB | lineage4.1.3 | None | SRR12708407 | HR-TB | lineage4.3.2.1 | None | SRR1175487 | Sensitive | lineage4.9 | None | ERR4816745 | Pre-XDR-TB | lineage2.2.1 | None | SRR11342686 | MDR-TB | lineage4.8 | None | SRR6046133 | HR-TB | lineage4.9 | None | SRR1181351 | Sensitive | lineage4.9 | None | SRR1181237 | Sensitive | lineage2.2.1;lineage4 | None | SRR1181349 | Sensitive | lineage4 | None | SRR7240033 | Other | La1.2;La1.8.1 | None | SRR11342636 | MDR-TB | lineage4.3.3 | None | ERR4799478 | Pre-XDR-TB | lineage2.2.1 | None | SRR1181283 | Sensitive | lineage4.9 | None | SRR13888750 | Other | La2 | None | SRR16156188 | Sensitive | lineage4.9 | None | ERR4815709 | Sensitive | lineage4.1.2.1 | None | SAMN02380990 | MDR-TB | lineage4.6.1.2 | None | ERR3797036 | HR-TB | lineage2.1;lineage4.1.4;lineage4.9 | None | ERR3283011 | Other | La3;lineage4.9 | None | SRR6046577 | Other | lineage4.6.3;lineage4.9 | None | ERR751345 | Other | lineage5.1.1 | None | SRR11342653 | MDR-TB | lineage2.2.1 | None | SRR9971270 | RR-TB | lineage2.2.1 | None | SRR7070195 | Sensitive | lineage3.1.2.1 | None | ERR161149 | Sensitive | lineage4.3.4.2.1 | mw | ERR4818259 | RR-TB | lineage4.1.1.1 | None | ERR485006 | HR-TB | lineage4.9 | None | SRR1181325 | Sensitive | lineage4.9 | None | SRR1180355 | Sensitive | lineage4.9 | None | SRR1180250 | Other | lineage4.9 | None | SRR14801759 | MDR-TB | La1.7;lineage4.9 | None | SRR11342664 | MDR-TB | lineage2.2.2 | None | ERR323037 | Other | lineage4.9 | None | ERR6197035 | Sensitive | lineage4.7 | None | ERR4816967 | Other | lineage5 | None | SRR8692863 | Other | lineage2.2;lineage4 | None |
|---|
