lineage | Count |
---|---|
lineage3 | 3 |
lineage4.1.2 | 1 |
lineage4.3.3 | 3 |
lineage4.2.2.2 | 1 |
lineage4.9 | 13 |
lineage4.1.1.1 | 1 |
lineage4.4.1.1 | 2 |
lineage4.3.3;lineage4.9 | 1 |
lineage1.2.1.2 | 1 |
lineage2.2.1 | 2 |
lineage4.8.1 | 2 |
lineage2.2.2 | 2 |
lineage3;lineage4 | 2 |
lineage4.1.2.1 | 1 |
lineage4.3.4.2.1 | 1 |
lineage2.2.1.1 | 1 |
lineage4.1 | 1 |
lineage1.1.3 | 1 |
lineage3.1.2.1 | 1 |
spoligotype | Count |
---|---|
None | 40 |
ID | Drug resistance | Lineage | Country iso2 | ERR3275190 | Other | lineage3 | nl | SRR11342658 | RR-TB | lineage4.1.2 | None | ERR4816610 | Other | lineage4.3.3 | None | SRR11342687 | RR-TB | lineage4.2.2.2 | None | ERR176741 | Other | lineage4.9 | None | SRR11342642 | MDR-TB | lineage4.1.1.1 | None | SRR11342698 | RR-TB | lineage4.4.1.1 | None | SRR6832644 | Other | lineage4.3.3;lineage4.9 | None | ERR10796598 | Other | lineage4.9 | None | ERR4821761 | Other | lineage3 | gb | ERR4829816 | RR-TB | lineage4.4.1.1 | None | ERR2446509 | Other | lineage3 | nl | SRR16156775 | Other | lineage4.9 | None | SRR11342636 | MDR-TB | lineage4.3.3 | None | ERR485006 | HR-TB | lineage4.9 | None | SRR20969475 | Other | lineage1.2.1.2 | None | ERR323037 | Other | lineage4.9 | None | SRR14801652 | HR-TB | lineage4.3.3 | None | SRR6046141 | Other | lineage4.9 | None | ERR4816745 | Pre-XDR-TB | lineage2.2.1 | None | ERR4815813 | Sensitive | lineage4.8.1 | None | ERR11252736 | Other | lineage4.9 | None | SRR18003004 | Pre-XDR-TB | lineage2.2.2 | None | SRR10315556 | Sensitive | lineage2.2.1 | None | ERR4818393 | RR-TB | lineage3;lineage4 | None | ERR4815709 | Sensitive | lineage4.1.2.1 | None | ERR4822178 | Sensitive | lineage4.8.1 | gb | ERR6359066 | HR-TB | lineage4.9 | None | SRR5818647 | Other | lineage4.3.4.2.1 | None | ERR1063855 | Other | lineage4.9 | None | SRR3675230 | Other | lineage3;lineage4 | None | SRR6079962 | HR-TB | lineage2.2.1.1 | None | ERR4815502 | Other | lineage4.1 | None | SRR6046737 | Other | lineage4.9 | None | ERR2851356 | Sensitive | lineage4.9 | None | SRR11342664 | MDR-TB | lineage2.2.2 | None | ERR736831 | Other | lineage4.9 | None | ERR4816093 | Other | lineage1.1.3 | None | SRR7070195 | Sensitive | lineage3.1.2.1 | None | SRR6045832 | Other | lineage4.9 | None |
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