Rv0668 - c.189C>T
Drug resistance types
43 Sensitive
12 RR-TB
19 HR-TB
12 MDR-TB
8 Pre-XDR-TB
0 XDR-TB
43 Other
lineage Counts
| lineage | Count |
|---|---|
| 13 | |
| lineage4.9 | 26 |
| lineage2.2.1 | 12 |
| lineage4.1 | 1 |
| lineage2.2.1.1 | 1 |
| lineage4.8 | 4 |
| lineage4 | 40 |
| lineage4.3.2.1 | 1 |
| lineage4.3.3 | 2 |
| lineage4.8.1 | 1 |
| La1.8.1 | 3 |
| lineage4.1.2 | 1 |
| lineage4.4.1.2 | 1 |
| lineage4.9.1 | 1 |
| lineage3.1.1 | 2 |
| La1.3 | 5 |
| lineage4.9;La1.3 | 1 |
| lineage4.1.2.1 | 1 |
| lineage1.1.3.1 | 2 |
| lineage3 | 3 |
| lineage4.3.4.2 | 1 |
| lineage6 | 1 |
| lineage6.1.3 | 1 |
| lineage4.4.2 | 1 |
| lineage4.9;lineage4.8.1;lineage4.1.1 | 1 |
| lineage3.1.2.1 | 1 |
| lineage2.1 | 1 |
| lineage4.3.4.2.1 | 1 |
| lineage4;lineage2 | 1 |
| lineage1.1.2 | 2 |
| lineage1.1.1 | 1 |
| lineage4.6.2.2 | 1 |
| lineage4.1.3 | 1 |
| lineage4.9;lineage2.1 | 1 |
| lineage4.2.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 137 |
Geographic prevalence
Country level data for this variant is available for 1 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR6511621 | HR-TB | None | SRR6046737 | Other | lineage4.9 | None | ERR4831617 | MDR-TB | lineage2.2.1 | None | SRR6789624 | MDR-TB | lineage4.1 | None | ERR4831620 | MDR-TB | lineage2.2.1 | None | ERR4831616 | MDR-TB | lineage2.2.1 | None | ERR4831621 | MDR-TB | lineage2.2.1.1 | None | ERR4831657 | MDR-TB | lineage2.2.1 | None | ERR4817628 | Sensitive | lineage4.8 | gb | ERR323085 | Sensitive | lineage4 | None | ERR502510 | Sensitive | lineage4 | None | SRR9970981 | RR-TB | lineage4.3.2.1 | None | SRR9971041 | MDR-TB | lineage4.3.3 | None | SRR9971112 | Other | lineage2.2.1 | None | SRR9971150 | RR-TB | lineage4.8.1 | None | ERR323048 | Pre-XDR-TB | lineage4.9 | None | ERR5311077 | RR-TB | La1.8.1 | None | SRR9970980 | Other | lineage4.1.2 | None | SRR7535082 | Sensitive | lineage4 | None | SRR9970979 | Sensitive | lineage4.8 | None | ERR323056 | HR-TB | lineage4.4.1.2 | None | ERR323066 | Sensitive | lineage4 | None | ERR11465189 | RR-TB | lineage4.9.1 | None | ERR1035122 | Sensitive | None | ERR037234 | Sensitive | lineage4.9 | None | ERR108471 | HR-TB | lineage4 | None | ERR1063855 | Other | lineage4 | None | ERR1063883 | Sensitive | lineage4 | None | ERR1063896 | Sensitive | None | ERR10796565 | RR-TB | lineage4.9 | None | ERR4769442 | HR-TB | lineage4 | None | ERR137286 | Sensitive | lineage4 | None | ERR3273109 | MDR-TB | lineage4 | None | ERR4024991 | Other | None | ERR4596904 | MDR-TB | lineage3.1.1 | None | ERR473323 | HR-TB | lineage4.9 | None | ERR4769408 | Other | La1.3 | None | ERR323115 | Sensitive | lineage4 | None | ERR3468488 | RR-TB | La1.8.1 | None | ERR4596944 | MDR-TB | lineage3.1.1 | None | ERR4769516 | Other | La1.3 | None | ERR4769444 | HR-TB | lineage4.9 | None | ERR4796472 | Pre-XDR-TB | lineage2.2.1 | None | ERR4769550 | Other | lineage4.9;La1.3 | None | ERR4769552 | Other | La1.3 | None | ERR4769554 | RR-TB | lineage4.9 | None | ERR4769555 | Other | La1.3 | None | ERR4769514 | Other | La1.3 | None | ERR4796254 | Sensitive | lineage4 | None | ERR6358979 | Other | None | ERR4797474 | Other | None | ERR4798099 | Other | None | ERR6197038 | HR-TB | lineage4.9 | None | ERR6358951 | HR-TB | lineage4 | None | ERR4797184 | Sensitive | lineage4 | None | ERR4797264 | Sensitive | None | ERR4798823 | HR-TB | lineage4 | None | ERR4799378 | Sensitive | lineage4 | None | ERR751326 | Sensitive | lineage4 | None | ERR6359066 | HR-TB | lineage4 | None | ERR6359074 | HR-TB | lineage4.9 | None | ERR6866022 | Other | None | ERR6866125 | Sensitive | lineage4.1.2.1 | None | ERR6866410 | Sensitive | None | ERR6866639 | Other | None | ERR736872 | Sensitive | lineage4 | None | ERR736834 | Sensitive | lineage4 | None | ERR736837 | Other | lineage4.9 | None | SRR10315567 | Other | lineage2.2.1 | None | ERR8479578 | Sensitive | lineage1.1.3.1 | None | ERR9786076 | Sensitive | lineage3 | None | ERR9786592 | Sensitive | lineage4.3.4.2 | None | ERR9787336 | Other | lineage6 | None | ERR9787256 | Other | lineage6.1.3 | None | SRR1180996 | HR-TB | lineage4 | None | SRR1173568 | Other | lineage4.9 | None | SRR10315751 | MDR-TB | lineage4.8 | None | SRR1158918 | Sensitive | lineage4 | None | SRR1172717 | Other | lineage4.9 | None | SRR1173777 | Other | lineage4 | None | SRR20969542 | Other | lineage4.4.2 | None | SRR1183965 | Sensitive | lineage4.9 | None | SRR19295647 | Sensitive | lineage4.9 | None | SRR1791747 | Other | La1.8.1 | None | SRR18002881 | Pre-XDR-TB | lineage2.2.1 | None | SRR5341384 | Sensitive | lineage4.9 | None | ERR779852 | Sensitive | lineage4.9;lineage4.8.1;lineage4.1.1 | None | SRR3675246 | Sensitive | lineage4 | None | ERR4815022 | Other | lineage3.1.2.1 | None | ERR4816322 | Other | lineage4.9 | None | SRR22175249 | Pre-XDR-TB | lineage2.2.1 | None | SRR22424787 | Sensitive | lineage4.9 | None | ERR4814639 | HR-TB | lineage4 | None | ERR702405 | Sensitive | lineage2.1 | None | ERR216965 | HR-TB | lineage4.9 | None | ERR245794 | HR-TB | lineage4.3.4.2.1 | None | ERR4816762 | Other | lineage4;lineage2 | None | ERR4816852 | Other | lineage4.9 | None | ERR4817667 | HR-TB | lineage4.8 | None | ERR245675 | Sensitive | lineage1.1.2 | None | ERR4818536 | Other | lineage4.9 | None | SRR5341375 | Other | lineage4.9 | None | SRR5341453 | Sensitive | None | SRR5153091 | HR-TB | lineage4.3.3 | None | SRR5341396 | Other | lineage4 | None | SRR5341387 | Other | lineage4 | None | ERR4819314 | Other | lineage1.1.1 | None | SRR5341412 | Pre-XDR-TB | lineage3 | None | SRR5341267 | Pre-XDR-TB | lineage3 | None | SRR5341425 | Other | lineage4 | None | ERR4819462 | Other | lineage4 | None | SRR5341298 | Sensitive | lineage4 | None | SRR5341455 | Sensitive | lineage4 | None | ERR4819864 | RR-TB | lineage1.1.3.1 | None | SRR5341300 | Other | lineage4 | None | SRR5341299 | Sensitive | lineage4 | None | SRR5341303 | RR-TB | lineage4 | None | ERR4819809 | HR-TB | lineage4.6.2.2 | None | SRR5341310 | Other | lineage1.1.2 | None | SRR5341308 | Sensitive | lineage4 | None | SRR5341366 | Sensitive | lineage4 | None | SRR5341341 | Pre-XDR-TB | lineage2.2.1 | None | SRR5341461 | Sensitive | lineage4 | None | SRR5341467 | Other | lineage4 | None | SRR6045892 | Sensitive | None | ERR4821128 | MDR-TB | lineage4.1.3 | None | SRR6046117 | RR-TB | lineage4.9 | None | SRR5341465 | Pre-XDR-TB | lineage2.2.1 | None | SRR5341469 | Other | lineage4 | None | ERR502511 | Sensitive | lineage4.9;lineage2.1 | None | ERR4822261 | RR-TB | lineage2.2.1 | None | SRR6045664 | Other | lineage4.2.1 | None | SRR6044875 | HR-TB | lineage4.9 | None | SRR6044841 | Other | lineage4.9 | None | SRR6045267 | RR-TB | lineage4 | None | SRR6046385 | Other | lineage4.9 | None | ERR2851356 | Sensitive | lineage4.9 | None |
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