lineage | Count |
---|---|
lineage4.1.2 | 2 |
lineage4.1.1.3.1 | 3 |
lineage4.9 | 9 |
lineage4.3.4.2;lineage4.7 | 1 |
lineage4.4.1.1 | 3 |
lineage2.2.1.1 | 1 |
lineage4.2.2.2 | 1 |
lineage4.3 | 1 |
lineage4.1.1.1 | 2 |
La1.8.1 | 1 |
lineage2.2.1 | 14 |
lineage1.2.1.2 | 1 |
lineage4.4.1.1.1 | 2 |
lineage4.7 | 3 |
lineage3.1.2.1 | 1 |
lineage1.1.3.1 | 1 |
1 | |
lineage4.8 | 9 |
lineage3 | 5 |
lineage4.3.3 | 3 |
lineage4.8.2 | 1 |
lineage4.3.4.2 | 2 |
lineage3.1.2.1;lineage4.9 | 1 |
lineage4.2.1 | 3 |
lineage2.2.2 | 1 |
lineage4.8.1 | 2 |
lineage2.2.1;lineage4.9 | 1 |
lineage4.1.1.3.1;lineage4.9 | 1 |
lineage4.1.2.1 | 1 |
lineage2.2;lineage4.9 | 1 |
lineage4.3.4.2.1 | 1 |
lineage4.4 | 1 |
lineage4.8.2;lineage4.9 | 1 |
lineage4.1.1.3 | 1 |
La1.4 | 1 |
La1.2 | 1 |
spoligotype | Count |
---|---|
None | 84 |
ID | Drug resistance | Lineage | Country iso2 |
---|---|---|---|
SRR11342658 | RR-TB | lineage4.1.2 | None |
SRR5007167 | RR-TB | lineage4.1.1.3.1 | None |
SRR1735596 | RR-TB | lineage4.9 | None |
ERR6197023 | MDR-TB | lineage4.3.4.2;lineage4.7 | None |
ERR4821119 | Other | lineage4.4.1.1 | None |
SRR18909918 | Other | lineage2.2.1.1 | None |
SRR11342687 | RR-TB | lineage4.2.2.2 | None |
ERR3275941 | RR-TB | lineage4.3 | nl |
ERR4769433 | RR-TB | lineage4.9 | None |
SRR11342651 | MDR-TB | lineage4.1.1.1 | None |
ERR4188213 | Other | La1.8.1 | None |
SRR11342653 | MDR-TB | lineage2.2.1 | None |
SRR20969475 | Other | lineage1.2.1.2 | None |
SRR11342696 | MDR-TB | lineage4.4.1.1.1 | None |
ERR6197029 | Other | lineage4.7 | None |
ERR4819011 | Other | lineage3.1.2.1 | None |
ERR4819864 | RR-TB | lineage1.1.3.1 | None |
ERR4817069 | RR-TB | None | |
ERR867570 | RR-TB | lineage4.9 | None |
SRR7755657 | Other | lineage4.8 | None |
ERR4822261 | RR-TB | lineage2.2.1 | None |
SRR7070223 | HR-TB | lineage3 | None |
ERR4816610 | Other | lineage4.3.3 | None |
SRR11342649 | MDR-TB | lineage4.3.3 | None |
SRR22175249 | Pre-XDR-TB | lineage2.2.1 | None |
SAMEA3501073 | RR-TB | lineage4.8 | None |
SRR7645899 | Other | lineage2.2.1 | None |
SRR11342642 | MDR-TB | lineage4.1.1.1 | None |
ERR9029360 | MDR-TB | lineage2.2.1 | None |
SRR5007169 | RR-TB | lineage4.8.2 | None |
SRR7755645 | Pre-XDR-TB | lineage2.2.1 | None |
SRR7645927 | Other | lineage4.8 | None |
SRR16156775 | Other | lineage4.9 | None |
ERR867567 | RR-TB | lineage3 | None |
ERR4819706 | MDR-TB | lineage4.3.4.2 | None |
ERR6197035 | Sensitive | lineage4.7 | None |
ERR2512606 | HR-TB | lineage3 | None |
ERR2027290 | Other | lineage3.1.2.1;lineage4.9 | None |
SRR11342636 | MDR-TB | lineage4.3.3 | None |
SRR18003047 | MDR-TB | lineage2.2.1 | None |
SRR18002967 | HR-TB | lineage2.2.1 | None |
ERR978766 | RR-TB | lineage4.8 | None |
ERR978767_ERR978765_ERR978766 | RR-TB | lineage4.8 | None |
SRR7645972 | MDR-TB | lineage4.2.1 | None |
ERR5979454 | Pre-XDR-TB | lineage3 | None |
SRR11342664 | MDR-TB | lineage2.2.2 | None |
ERR4815556 | RR-TB | lineage3 | None |
ERR4818851 | RR-TB | lineage4.4.1.1 | None |
SRR11342693 | MDR-TB | lineage4.8.1 | None |
ERR4815310 | Other | lineage2.2.1;lineage4.9 | None |
SRR11342662 | MDR-TB | lineage4.8.1 | None |
SRR7645928 | Other | lineage4.7 | None |
SRR5007161 | RR-TB | lineage4.1.1.3.1;lineage4.9 | None |
ERR978765 | RR-TB | lineage4.8 | None |
SRR19303820 | RR-TB | lineage4.8 | None |
ERR4769554 | RR-TB | lineage4.9 | None |
SRR7755655 | Other | lineage4.1.2.1 | None |
ERR867575 | Other | lineage4.9 | None |
ERR2229234 | Sensitive | lineage4.8 | None |
ERR5917972 | MDR-TB | lineage4.4.1.1 | za |
ERR4815550 | Other | lineage2.2;lineage4.9 | None |
SRR11342682 | Other | lineage4.1.2 | None |
SRR5818647 | Other | lineage4.3.4.2.1 | None |
SRR16627752 | RR-TB | lineage4.4 | None |
SRR11342660 | MDR-TB | lineage2.2.1 | None |
SRR7645901 | MDR-TB | lineage2.2.1 | None |
ERR867523 | Pre-XDR-TB | lineage2.2.1 | None |
ERR867541 | MDR-TB | lineage4.2.1 | None |
SRR5007193 | RR-TB | lineage4.1.1.3.1 | None |
ERR978767 | RR-TB | lineage4.8 | None |
SRR5007168 | Other | lineage4.8.2;lineage4.9 | None |
SRR11342644 | MDR-TB | lineage4.4.1.1.1 | None |
SRR11342647 | MDR-TB | lineage4.1.1.3 | None |
SRR16278274 | Other | La1.4 | None |
SRR6046737 | Other | lineage4.9 | None |
SRR11342655 | MDR-TB | lineage2.2.1 | None |
SRR7070157 | Other | lineage4.1.1.3.1 | None |
SRR1735598 | RR-TB | lineage4.9 | None |
ERR4769418 | Other | La1.2 | None |
SRR7755649 | MDR-TB | lineage4.2.1 | None |
SRR11342673 | RR-TB | lineage4.3.4.2 | None |
ERR4831529 | Pre-XDR-TB | lineage2.2.1 | None |
SRR6044952 | Other | lineage4.9 | None |
SRR7645906 | Other | lineage2.2.1 | None |