Rv0667 - c.2460T>C


Drug resistance types
34 Sensitive 29 RR-TB 166 HR-TB 35 MDR-TB 21 Pre-XDR-TB 0 XDR-TB 181 Other
lineage Counts
lineage Count
lineage4.9 71
167
lineage4 19
lineage2.2.1 37
lineage4.3.3 9
lineage4.1.2.1 24
lineage1.1 1
lineage3.1 4
lineage4.3.4.2.1 6
lineage5.2 2
lineage2 3
lineage4.1.1.3 5
La2 1
lineage4.8 11
lineage4.3.2.1 1
lineage4.7 2
lineage4.2.1 1
La1.2 2
lineage4.3.4.1 2
lineage4.4.1.2 1
La1 2
lineage4.4.1.1;lineage1.2.2.1 1
La1.8.1 3
lineage6.1.1 2
lineage4.6.2.2 4
lineage3 12
lineage4.1.3 2
La1.3 1
lineage4.9;La1.3 1
lineage1.2.2.2 1
lineage4.8;La3 2
lineage3.1.2 1
lineage2.2 3
lineage3.1.2.1 3
lineage2.2.2 2
lineage4.6.1.1 2
lineage4.5 3
lineage4.1.2.1.1 1
lineage4.3.2 2
lineage1.1.2 2
lineage4.6.5 2
lineage1.1.3.2 1
lineage4.1.1 4
lineage6 2
lineage6.3.1 1
lineage3.1.2.2;lineage3.1.2.1 1
lineage4.1.2 1
lineage4.6.1.2 2
lineage4.4.1.1 4
lineage1.2.1.2.1 1
lineage1.1.1 1
lineage2.1 2
La1.4 1
lineage1.2.1.2 1
lineage7;lineage2.2.1.2 1
lineage9;lineage3.1 1
lineage4.9;La3 1
lineage6.3;lineage4.9;lineage2.1 1
lineage4.9;La1 1
lineage4.1.1.1 1
lineage4.2;La1.7 1
lineage4.9;lineage4.6.3 1
lineage6.3;lineage2.2.1 1
lineage3;lineage2.2.1 1
lineage4.1 2
lineage3;lineage2.1 1
lineage1.1.3.1 2
lineage5 1
lineage1.1.3 1
lineage4;lineage1.1.2 1
lineage4.1;lineage1 1
lineage4.3 1
lineage4.2.2.2 1
lineage4;lineage3.1.2.1 1
lineage4;lineage1.1 1
spoligotype Counts
spoligotype Count
None 466
Geographic prevalence
Country level data for this variant is available for 5 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR6046152 Other lineage4.9 None
SRR6044790 HR-TB None
SRR6046151 Sensitive lineage4.9 None
SRR6044780 Other lineage4.9 None
SRR6044855 Other lineage4.9 None
ERR2693232 Other lineage4.9 None
SRR6044875 HR-TB lineage4.9 None
SRR6044890 Other lineage4.9 None
SRR6045952 HR-TB None
SRR6044952 RR-TB lineage4.9 None
SRR6045010 Other lineage4 None
SRR6046066 HR-TB None
SRR6045217 Other lineage4 None
SRR6046385 Other lineage4.9 None
SRR6046253 HR-TB lineage4.9 None
SRR6046305 Other lineage4.9 None
SRR6325442 HR-TB None
SRR6046299 HR-TB None
SRR6325444 HR-TB None
SRR6046362 HR-TB None
ERR4830353 Other None
SRR6046382 HR-TB lineage2.2.1 None
SRR6046460 HR-TB None
SRR6046492 Other None
SRR6046482 HR-TB None
SRR6046514 HR-TB None
SRR6325448 HR-TB None
SRR6046540 HR-TB None
SRR6325447 HR-TB None
ERR4816569 Sensitive lineage4.3.3 gb
SRR6046737 Other lineage4.9 None
SRR6046824 HR-TB None
SRR6397654 HR-TB lineage4.1.2.1 None
SRR6458421 MDR-TB lineage2.2.1 None
SRR6458423 HR-TB lineage2.2.1 None
ERR4831117 HR-TB None
ERR3077978 Other lineage1.1 None
ERR502470 RR-TB lineage4.9 None
SRR6789626 Other None
ERR323034 HR-TB lineage3.1 None
ERR11466146 Other lineage4.3.4.2.1 None
ERR4872094 MDR-TB lineage5.2 None
ERR294248 HR-TB None
SRR6832171 Pre-XDR-TB lineage2 None
SRR6982239 HR-TB lineage4.1.1.3 None
SRR6982246 Sensitive lineage4 None
SRR6832644 Other lineage4.3.3 None
ERR323036 HR-TB None
ERR11466014 Sensitive lineage4.3.4.2.1 None
ERR323035 Sensitive lineage4.9 None
ERR502524 HR-TB La2 None
ERR502889 Other None
ERR502532 HR-TB None
SRR7535086 Other None
ERR502908 HR-TB lineage2.2.1 None
ERR5311099 HR-TB None
SRR7131023 Other lineage4.1.2.1 None
ERR323038 HR-TB None
SRR8217918 HR-TB None
ERR5311081 HR-TB None
ERR5311090 HR-TB None
SRR7496509 Other None
SRR9940980 Sensitive lineage4.9 None
ERR11466174 Other lineage4.8 None
ERR323044 HR-TB lineage4.3.4.2.1 None
SRR9970981 RR-TB lineage4.3.2.1 None
SRR7645928 RR-TB lineage4.7 None
SRR9971112 Other lineage2.2.1 None
SRR7755645 Pre-XDR-TB lineage2.2.1 None
SRR7645971 Other lineage2.2.1 None
SRR7755688 Pre-XDR-TB lineage4.2.1 None
ERR323048 Pre-XDR-TB lineage4.9 None
ERR323039 HR-TB None
ERR323043 HR-TB None
ERR323041 HR-TB None
ERR323055 HR-TB None
ERR323063 HR-TB None
ERR323053 HR-TB None
SRR7851312 Other La1.2 None
ERR323054 HR-TB lineage3.1 None
ERR11466499 Other lineage4.3.4.1 None
ERR11465025 Other lineage4.1.1.3 None
ERR067681 HR-TB None
ERR1023295 HR-TB lineage4.1.2.1 None
ERR1023502 MDR-TB lineage2.2.1 None
ERR1034634 HR-TB None
ERR10796572 Other lineage4.3.4.1 None
ERR1063862 HR-TB None
ERR1035157 Other lineage4.9 None
ERR11465024 Other lineage4.1.1.3 None
ERR108471 HR-TB lineage4 None
ERR108125 Pre-XDR-TB lineage4.9 None
ERR3283055 HR-TB None
ERR11049020 Other lineage4.8 None
ERR126597 MDR-TB lineage4.4.1.2 None
ERR3283010 Other La1 None
ERR3283013 MDR-TB lineage4 None
ERR3283024 Other None
ERR3283027 HR-TB None
ERR3283032 HR-TB None
ERR3283036 HR-TB None
ERR3283048 HR-TB lineage4.9 None
ERR3283051 Other lineage4.9 None
ERR133986 HR-TB None
ERR11465714 Other lineage4.4.1.1;lineage1.2.2.1 None
ERR3283006 RR-TB lineage4.9 None
ERR3283017 HR-TB None
ERR4821179 Other lineage4.1.2.1 gb
ERR3439432 Other None
ERR3439265 Other lineage4.9 None
ERR3445504 HR-TB None
ERR3468544 HR-TB None
ERR3797044 Other None
ERR3797016 HR-TB None
ERR3797024 Other lineage4.9 None
ERR3797023 HR-TB La1.8.1 None
ERR3797043 HR-TB None
ERR3797046 HR-TB None
ERR3797014 Other None
ERR3797017 Other None
ERR3797058 Other lineage4.9 None
ERR3797061 Other None
ERR3797062 RR-TB lineage4.9 None
ERR3797071 Other lineage4.9 None
ERR3804155 Other lineage4.1.2.1 None
ERR3797083 HR-TB None
ERR3797069 Other None
ERR3797082 Other lineage4.9 None
ERR3799304 Other lineage6.1.1 None
ERR3801503 Sensitive lineage4.6.2.2 None
ERR4407452 Sensitive lineage3 None
ERR3804169 HR-TB lineage4.1.3 None
ERR4188350 HR-TB None
ERR387051 HR-TB None
ERR403298 HR-TB lineage4 None
ERR4596910 Sensitive lineage4 None
ERR4407463 HR-TB None
ERR473334 HR-TB lineage4.9 None
ERR4796577 MDR-TB None
ERR4769417 Pre-XDR-TB lineage4.9 None
ERR4769436 Other La1.3 None
ERR4769493 Pre-XDR-TB lineage4.9;La1.3 None
ERR4769497 HR-TB La1.2 None
ERR4798406 HR-TB None
ERR4797054 Pre-XDR-TB lineage2 None
ERR4797588 MDR-TB lineage3 None
ERR4798262 HR-TB La1 None
ERR4797201 Other lineage1.2.2.2 None
ERR12015083 Other lineage4.8;La3 None
ERR4798648 HR-TB lineage3.1.2 None
ERR4799171 Pre-XDR-TB lineage4.8 None
ERR4799513 HR-TB lineage2.2 None
ERR4798493 MDR-TB lineage2.2.1 None
ERR4798504 Other lineage3 None
ERR4800102 Sensitive lineage3.1.2.1 None
ERR4800341 Other lineage3 None
ERR4800527 MDR-TB lineage2.2.1 None
ERR4811142 MDR-TB None
ERR4811105 HR-TB None
ERR4808964 RR-TB lineage2.2.1 None
ERR4809333 Pre-XDR-TB lineage2.2.2 None
ERR4810624 HR-TB lineage2.2 None
ERR4810741 HR-TB None
ERR4811022 HR-TB None
ERR6358755 Other lineage4.6.1.1 None
ERR5908228 Other lineage4.3.3 None
ERR4811493 HR-TB None
ERR5336148 Other None
ERR5987263 MDR-TB lineage2.2.1 None
ERR6359045 HR-TB None
ERR6358837 HR-TB None
ERR702406 HR-TB None
ERR6866125 Sensitive lineage4.1.2.1 None
ERR9119096 Other lineage4.3.3 None
ERR736874 HR-TB None
ERR752229 Other lineage4.5 None
ERR760733 MDR-TB lineage4.1.2.1.1 None
ERR772255 MDR-TB lineage4.3.2 None
ERR9117721 HR-TB lineage1.1.2 None
ERR736835 HR-TB None
ERR736839 Other None
ERR736865 HR-TB None
ERR736867 HR-TB None
ERR7801175 RR-TB lineage4.6.5 None
ERR7801176 RR-TB lineage4.6.5 None
ERR7821123 Other lineage1.1.3.2 None
ERR176549 Other lineage4.3.4.2.1 None
ERR8976043 HR-TB None
ERR9117709 HR-TB None
ERR9117805 Other lineage4.3.2 None
ERR9119500 MDR-TB lineage5.2 None
ERR9786444 Sensitive lineage4.8 None
ERR9786421 Other lineage4.1.2.1 None
ERR9119733 MDR-TB lineage2.2.1 None
ERR9786986 HR-TB lineage4.1.2.1 None
ERR9786604 Other None
ERR9786611 HR-TB lineage4.1.3 None
ERR9786601 Other lineage4.1.2.1 None
ERR9786569 Other lineage4.8 None
ERR9786617 Other lineage4.1.1 None
ERR9786639 Sensitive lineage4.8 None
ERR9786642 Other lineage4.1.2.1 None
ERR9786627 Other lineage4.1.2.1 None
ERR9786645 Other lineage4.6.2.2 None
ERR9786671 Other None
ERR9786656 Sensitive lineage4.1.2.1 None
ERR9786682 Other lineage4.1.2.1 None
ERR9786694 Other lineage4.1.2.1 None
ERR9786711 Sensitive lineage4.6.2.2 None
ERR9787165 Other lineage6 None
ERR9787014 Other lineage6.1.1 None
ERR9787139 Other lineage6.3.1 None
SRR069978 Pre-XDR-TB lineage2.2.2 None
ERR9787336 Other lineage6 None
ERR987729 HR-TB lineage3.1.2.2;lineage3.1.2.1 None
ERR987733 RR-TB lineage4.6.1.1 None
ERR9787197 Other None
ERR987722 HR-TB None
SRR10315556 Sensitive lineage2.2.1 None
ERR11050174 Sensitive lineage4.1.2 None
SRR10315751 MDR-TB lineage4.8 None
SRR10315567 Other lineage2.2.1 None
SRR1049675 HR-TB lineage2.2.1 None
SRR1062880 MDR-TB lineage4.6.1.2 None
SRR1049674 HR-TB lineage2.2.1 None
SRR1162740 Other lineage4.1.2.1 None
SRR1062919 HR-TB lineage2.2.1 None
SRR1140724 HR-TB lineage2.2.1 None
SRR1140712 MDR-TB lineage4.6.1.2 None
SRR1163221 HR-TB lineage4.1.2.1 None
SRR1165423 Other lineage4.1.2.1 None
SRR1167055 Other lineage4.1.2.1 None
SRR1166821 HR-TB lineage4.1.2.1 None
SRR1169194 Other None
SRR1172728 MDR-TB None
SRR1172234 Other None
SRR1172310 HR-TB None
SRR1172146 Sensitive lineage4.9 None
SRR1172214 HR-TB lineage4.9 None
SRR1172817 HR-TB None
SRR1172844 MDR-TB lineage4.4.1.1 None
SRR1173153 HR-TB None
SRR1172951 Other None
SRR1172857 MDR-TB None
SRR1172885 HR-TB lineage4.9 None
SRR1173118 Other None
SRR1173166 Other lineage4.9 None
SRR1173384 Other lineage4 None
SRR1173218 Pre-XDR-TB lineage4.3.3 None
SRR1173310 MDR-TB None
SRR1173363 HR-TB None
SRR1173400 Other None
SRR1173633 HR-TB lineage4.9 None
SRR1173562 HR-TB lineage4 None
SRR1173453 Other lineage4.4.1.1 None
SRR1173484 Other lineage4 None
SRR1173706 Other lineage4.9 None
SRR1173629 Other None
SRR1173767 HR-TB lineage4.4.1.1 None
SRR1173719 HR-TB lineage3 None
SRR1174897 HR-TB None
SRR1173778 Other None
SRR1173788 Other None
SRR1175049 RR-TB None
SRR1180270 Other lineage2.2.1 None
SRR1175052 HR-TB lineage4.9 None
SRR1175074 MDR-TB None
SRR1196566 HR-TB None
SRR1180440 Other lineage4.9 None
SRR1180446 Other lineage4.9 None
SRR1184294 HR-TB None
SRR1184298 Pre-XDR-TB lineage4.3.3 None
SRR1184346 HR-TB lineage3.1 None
SRR1184388 Other None
SRR1196474 HR-TB lineage3.1 None
SRR1196494 MDR-TB None
SRR1196546 HR-TB None
SRR1183145 Other lineage2.2.1 None
SRR1184312 HR-TB lineage2.2.1 None
SRR1184372 MDR-TB None
SRR1184381 MDR-TB None
SRR1184380 HR-TB None
SRR1196571 Pre-XDR-TB lineage4.3.3 None
SRR13423649 Sensitive lineage2.2.1 None
SRR1196677 HR-TB lineage2 None
SRR12142341 HR-TB None
SRR1196768 MDR-TB None
SRR12142339 HR-TB lineage2.2.1 None
SRR12416824 HR-TB None
SRR13837430 Other lineage4.9 None
SRR13837696 HR-TB lineage4.9 None
SRR13861500 RR-TB lineage4.9 None
SRR13861305 Other lineage4.9 None
SRR13861332 Other lineage4.9 None
SRR13861333 Sensitive lineage4.9 None
SRR13861386 HR-TB lineage4.9 None
SRR13861397 HR-TB lineage4.9 None
SRR13838004 Sensitive lineage4.9 None
SRR13861224 Sensitive lineage4.9 None
SRR13861400 Other lineage4.9 None
SRR13861549 RR-TB lineage4.9 None
SRR13861629 RR-TB lineage4.9 None
SRR13861568 Other lineage4.9 None
SRR13861606 Sensitive lineage4.9 None
SRR13861646 Other lineage4.9 None
SRR13861663 Sensitive lineage4.9 None
SRR13861666 Sensitive lineage4.9 None
SRR1510066 Other lineage1.2.1.2.1 None
SRR14334194 Pre-XDR-TB lineage2.2.1 None
SRR14066533 Sensitive lineage1.1.1 None
SRR16156188 HR-TB lineage4.9 None
SRR15368973 Other None
SRR16156804 RR-TB lineage4.9 None
SRR1710057 Other lineage2.1 None
SRR16157123 Other lineage4.9 None
SRR16278274 Other La1.4 None
SRR1640750 HR-TB None
SRR17832802 HR-TB lineage3 None
SRR1735596 RR-TB lineage4.9 None
SRR17658565 Other lineage3 None
SRR20969475 Other lineage1.2.1.2 None
SRR19303884 HR-TB None
SRR18003019 Other lineage2.2.1 None
SRR18213713 HR-TB lineage4.5 None
SRR18549032 HR-TB lineage7;lineage2.2.1.2 None
SRR19304036 HR-TB None
SRR25827418 Pre-XDR-TB lineage9;lineage3.1 None
SRR5709967 MDR-TB lineage2.2.1 None
SRR26159043 Other lineage4.9 None
SRR25827682 Other None
SRR21677886 Sensitive lineage4.9 None
SRR22175249 Pre-XDR-TB lineage2.2.1 None
ERR11138607 Pre-XDR-TB lineage2.2.1 None
SRR21732980 Other lineage4.3.3 None
SRR26399973 Other lineage4.9;La3 None
SRR25827687 MDR-TB lineage1.1.2 None
ERR11081257 Other lineage4.8 None
ERR11081258 Other lineage4.8 None
SRR23961558 Other lineage6.3;lineage4.9;lineage2.1 None
SRR23961542 Other lineage4.9;La1 None
SRR25827507 MDR-TB lineage4.1.1.1 None
SRR23961559 Other lineage4.2;La1.7 None
SRR26399255 Sensitive lineage2.2.1 None
SRR26159047 Other lineage4.9;lineage4.6.3 None
SRR6325445 HR-TB None
SRR28119811 Other lineage6.3;lineage2.2.1 None
SRR25827497 Pre-XDR-TB lineage3;lineage2.2.1 None
ERR176793 Other lineage4.1.1 None
ERR4815121 HR-TB lineage4.6.2.2 None
ERR4815604 HR-TB None
SRR3675464 HR-TB lineage4.1 None
SRR3675465 HR-TB None
ERR550636 MDR-TB lineage4.1.1.3 None
ERR4815310 Other None
ERR1035239 HR-TB None
ERR158583 HR-TB None
SRR3675502 Other None
SRR3675482 HR-TB None
SRR3675221 HR-TB None
ERR4814352 HR-TB lineage2.2.1 None
SRR3675486 HR-TB None
SRR3416776 Other lineage2.1 None
ERR4814536 MDR-TB lineage3;lineage2.1 None
ERR4814617 Other lineage1.1.3.1 None
ERR161033 HR-TB None
SRR3675488 HR-TB None
ERR161034 Other lineage4.3.4.2.1 None
SRR3675501 HR-TB None
SRR3675222 Other None
SRR3675234 Other None
SRR3675236 HR-TB None
SRR3675232 Other lineage4.1.2.1 None
ERR4815550 Other lineage4 None
ERR181824 HR-TB lineage4 None
SRR3675280 HR-TB lineage4.9 None
SRR3675284 HR-TB lineage4.9 None
SRR3675311 Other None
SRR3675456 HR-TB None
SRR3675383 HR-TB None
ERR176740 HR-TB None
ERR4815752 Other lineage4.9 None
ERR176751 HR-TB None
ERR4816967 RR-TB lineage5 None
ERR2229542 Other lineage4.8 None
ERR4816999 Other None
ERR2027233 RR-TB lineage4.1.2.1 None
ERR4816093 Other lineage1.1.3 None
ERR212001 HR-TB None
ERR2027263 Other lineage4 None
SRR3675545 HR-TB None
ERR4817037 Other lineage4.9 None
ERR4816232 Other lineage4 None
SRR3675550 Other None
ERR4817060 RR-TB None
SRR3675555 HR-TB None
SRR3675558 HR-TB None
ERR4817069 RR-TB None
SRR3675572 Other None
ERR212121 HR-TB None
ERR1034791 RR-TB None
ERR4816466 HR-TB None
ERR4816548 MDR-TB lineage4.5 None
ERR4816551 HR-TB lineage4.1.1.3 None
ERR4816585 Other lineage2.2 None
ERR4816559 MDR-TB lineage4.4.1.1 None
ERR4817735 Other lineage4.8 None
ERR502912 Other lineage2.2.1 None
ERR2229787 Sensitive lineage4 None
ERR4816717 RR-TB lineage3.1.2.1 None
ERR4816745 Pre-XDR-TB lineage2.2.1 None
ERR4816756 RR-TB None
ERR4817692 HR-TB lineage4;lineage1.1.2 None
ERR4817893 Other lineage4.8;La3 None
ERR4819068 Sensitive lineage4.1;lineage1 None
SRR7496472 Other None
ERR4817896 HR-TB lineage2.2.1 None
ERR4818021 Other La1.8.1 None
ERR4819011 Other lineage3.1.2.1 None
ERR4818128 RR-TB lineage4.1.2.1 None
ERR4818110 Sensitive lineage4.9 None
ERR2446566 Other lineage4.1 None
ERR4819051 Other lineage4 None
ERR1035162 Other None
ERR245716 Sensitive lineage2.2.1 None
ERR4818259 RR-TB lineage4.1.1 None
ERR234659 HR-TB None
ERR2229143 Other lineage4.1.1 None
ERR3275941 RR-TB lineage4.3 nl
ERR2513470 Other lineage4.2.2.2 None
ERR4818393 RR-TB lineage3 None
ERR4818394 Other lineage4.9 None
ERR3275220 Other lineage3 nl
ERR4818583 Other lineage4.3.3 None
ERR4818522 Pre-XDR-TB lineage3 None
ERR2509673 Other lineage2.2.1 None
ERR4819377 Other lineage4;lineage3.1.2.1 None
ERR4818615 Other None
SRR5007188 Other lineage4 None
ERR4819280 Sensitive lineage4 None
ERR4819322 Other lineage4;lineage1.1 None
SRR5341456 Other None
ERR4820394 Other lineage4.3.4.2.1 None
SRR5341418 Other None
ERR4820324 Other lineage4 None
ERR1035138 MDR-TB None
SAMN02414850 Other lineage4.1.2.1 None
ERR4819781 Other lineage2.2.1 None
ERR4819772 RR-TB lineage1.1.3.1 None
SRR5341333 HR-TB None
SRR5341302 HR-TB None
ERR4819932 Other lineage4.7 None
SRR5431730 Other La1.8.1 None
SRR5341470 HR-TB None
ERR4820854 Other lineage4.1.2.1 None
ERR2693238 HR-TB lineage4.9 None
ERR2693231 Other None
ERR2693239 HR-TB None
ERR4821060 Sensitive lineage4.9 None
ERR4821053 Other lineage3 None
ERR2693254 Other None
ERR2693257 Other None
ERR278594 HR-TB None
ERR4821214 RR-TB None
ERR2693227 Other lineage4.9 None
ERR2693230 Other None
ERR2446144 Other lineage3 nl