SRR11342651
|
MDR-TB
|
lineage4.1.1.1
|
None
|
SRR1180420
|
Sensitive
|
lineage4.9
|
None
|
SRR7240033
|
Other
|
La1.2;La1.8.1
|
None
|
SRR14801749
|
HR-TB
|
lineage4.9
|
None
|
ERR405219
|
HR-TB
|
La1.7;lineage3.1;lineage4
|
None
|
ERR3797063
|
Sensitive
|
La3;lineage4.9
|
None
|
SRR16156188
|
Sensitive
|
lineage4.9
|
None
|
ERR124636
|
Sensitive
|
lineage4.9
|
None
|
ERR502473
|
RR-TB
|
lineage4.9
|
None
|
ERR3283011
|
Other
|
La3;lineage4.9
|
None
|
SRR5341461
|
HR-TB
|
lineage4.9
|
None
|
SRR6789624
|
HR-TB
|
lineage4.1.1.3
|
None
|
ERR867541
|
MDR-TB
|
lineage4.2.1
|
None
|
SRR1180319
|
Sensitive
|
lineage4.9
|
None
|
SRR1180977
|
Sensitive
|
lineage4.9
|
None
|
ERR978767
|
RR-TB
|
lineage4.8
|
None
|
SRR5341453
|
Other
|
lineage4.9
|
None
|
ERR1035122
|
Sensitive
|
lineage4.9
|
None
|
SRR12416842
|
HR-TB
|
lineage4.9
|
None
|
ERR8479578
|
Sensitive
|
lineage1.1.3.1
|
None
|
SRR11342696
|
MDR-TB
|
lineage4.4.1.1.1
|
None
|
ERR4819640
|
RR-TB
|
lineage4.6.2.2
|
None
|
ERR323056
|
HR-TB
|
lineage4.4.1.2
|
None
|
ERR11465352
|
Sensitive
|
lineage4.3.4.1
|
None
|
SRR1180399
|
Sensitive
|
lineage4.9
|
None
|
ERR1034634
|
HR-TB
|
lineage4.9
|
None
|
SRR5341467
|
Other
|
lineage4.9
|
None
|
SRR1062928
|
Other
|
lineage4.1.2.1;lineage4.9
|
None
|
ERR4819383
|
RR-TB
|
lineage4.9
|
None
|
SRR5341298
|
Sensitive
|
lineage4.9
|
None
|
SRR9971112
|
Other
|
lineage2.2.1
|
None
|
SRR1181390
|
Sensitive
|
lineage2.2.1;lineage4.9
|
None
|
ERR867525
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR1062918
|
Other
|
lineage3
|
None
|
ERR4819863
|
RR-TB
|
lineage4.9
|
None
|
SRR11342664
|
MDR-TB
|
lineage2.2.2
|
None
|
ERR11465510
|
Sensitive
|
lineage4.3.4.2.1
|
None
|
ERR4831621
|
MDR-TB
|
lineage2.2.1.1
|
None
|
SRR20632814
|
Sensitive
|
lineage4.9
|
None
|
ERR405209
|
Sensitive
|
La1.7;lineage4.9
|
None
|
ERR3797087
|
Sensitive
|
lineage4.9
|
None
|
ERR11465562
|
Other
|
lineage4.1.2.1
|
None
|
SRR1049725
|
Other
|
lineage4.1.2.1;lineage4.4.1
|
None
|
SRR1175513
|
Sensitive
|
lineage4.9
|
None
|
SRR7236177
|
Other
|
La1.8.1
|
None
|
SRR21240055
|
Other
|
lineage4.1.2.1
|
None
|
SRR1175506
|
Sensitive
|
lineage4.9
|
None
|
ERR323066
|
Sensitive
|
lineage4.9
|
None
|
ERR1199132
|
Sensitive
|
lineage4.6.1.1
|
None
|
SRR1049675
|
HR-TB
|
lineage2.2.1
|
None
|
SRR5007161
|
RR-TB
|
lineage4.1.1.3.1;lineage4.9
|
None
|
SRR5007165
|
Other
|
lineage3
|
None
|
ERR4816866
|
Other
|
lineage2.2.1
|
None
|
SRR10993951
|
RR-TB
|
La1.6
|
None
|
SRR1181215
|
Sensitive
|
lineage4.4.1.1.1
|
None
|
ERR4819772
|
Other
|
lineage1.1.3.1
|
None
|
ERR4819948
|
Other
|
lineage4.4.1.1
|
None
|
SRR1172807
|
Sensitive
|
lineage4.9
|
None
|
ERR1063896
|
Sensitive
|
|
None
|
SRR1180300
|
Sensitive
|
lineage4.9
|
None
|
ERR502481
|
RR-TB
|
lineage4.9
|
None
|
ERR502511
|
Sensitive
|
lineage4.9
|
None
|
SRR1180444
|
Sensitive
|
lineage4.9
|
None
|
ERR4819305
|
Sensitive
|
lineage4.9
|
None
|
SRR1062919
|
HR-TB
|
lineage2.2.1
|
None
|
SRR1159378
|
Other
|
lineage4.9
|
None
|
SRR1180946
|
Sensitive
|
lineage2;lineage4.9
|
None
|
ERR5162090
|
RR-TB
|
lineage4.9
|
None
|
ERR4817204
|
Other
|
lineage4.9
|
None
|
ERR11465351
|
Sensitive
|
lineage4.1.2.1
|
None
|
ERR6866410
|
Sensitive
|
lineage4.9
|
None
|
SRR5341341
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR13285068
|
Sensitive
|
lineage4.9
|
None
|
ERR4831617
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR1184114
|
Sensitive
|
lineage2.2.1;lineage4.9
|
None
|
ERR4815550
|
Other
|
lineage2.2;lineage4.9
|
None
|
ERR323115
|
Sensitive
|
lineage4.9
|
None
|
ERR4798099
|
Other
|
lineage4.9
|
None
|
SRR5341425
|
Other
|
lineage4.9
|
None
|
ERR4814734
|
Other
|
lineage1.2.1.1
|
None
|
ERR6359066
|
HR-TB
|
lineage4.9
|
None
|
ERR9787256
|
Other
|
lineage6.1.3
|
None
|
SRR5341384
|
HR-TB
|
lineage4.9
|
None
|
ERR502510
|
Sensitive
|
lineage4.9
|
None
|
SRR5818647
|
Other
|
lineage4.3.4.2.1
|
None
|
ERR3283031
|
Sensitive
|
La3;lineage4.9
|
None
|
SRR11342686
|
MDR-TB
|
lineage4.8
|
None
|
ERR4769433
|
RR-TB
|
lineage4.9
|
None
|
SRR3675461
|
RR-TB
|
lineage4.9
|
None
|
SRR11342660
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR4797184
|
Sensitive
|
lineage4.9
|
None
|
ERR4769474
|
HR-TB
|
lineage4.9
|
None
|
ERR3283047
|
Sensitive
|
La3;lineage4.9
|
None
|
ERR6866125
|
Sensitive
|
lineage4.1.2.1
|
None
|
ERR502478
|
RR-TB
|
lineage4.9
|
None
|
SRR11342636
|
MDR-TB
|
lineage4.3.3
|
None
|
SRR6511621
|
Sensitive
|
lineage4.9
|
None
|
ERR867523
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR3273109
|
HR-TB
|
lineage4
|
None
|
ERR4820030
|
Other
|
lineage4.9
|
None
|
ERR11465509
|
Sensitive
|
lineage4.3.4.2.1
|
None
|
SRR20969475
|
Other
|
lineage1.2.1.2
|
None
|
SRR1181349
|
Sensitive
|
lineage4
|
None
|
ERR245794
|
HR-TB
|
lineage4.3.4.2.1
|
None
|
ERR978766
|
RR-TB
|
lineage4.8
|
None
|
SAMN02380982
|
MDR-TB
|
lineage4.3.4.2.1
|
None
|
ERR6866639
|
Other
|
lineage4.9
|
None
|
ERR4820410
|
RR-TB
|
lineage3.1.1
|
None
|
SRR3675246
|
Other
|
lineage4.9
|
None
|
SRR5341308
|
Sensitive
|
lineage4.9
|
None
|
SRR1175512
|
Sensitive
|
lineage4.9
|
None
|
SRR14801652
|
HR-TB
|
lineage4.3.3
|
None
|
SRR6045519
|
MDR-TB
|
M.canetti;lineage4.9
|
None
|
SRR1184329
|
Other
|
lineage4.9
|
None
|
ERR11465353
|
Sensitive
|
lineage4.3.4.1
|
None
|
SRR11342647
|
MDR-TB
|
lineage4.1.1.3
|
None
|
ERR11488822
|
Pre-XDR-TB
|
lineage2.2.1;lineage4.1.2.1
|
None
|
SRR6044835
|
Other
|
lineage4.9
|
None
|
SRR8758877
|
MDR-TB
|
lineage4.1.1.1
|
None
|
ERR779852
|
Sensitive
|
lineage4.9
|
None
|
SRR1180413
|
Sensitive
|
lineage4.9
|
None
|
ERR11465511
|
Other
|
lineage4.3.4.2.1
|
None
|
SRR1181351
|
Sensitive
|
lineage4.9
|
None
|
ERR3283057
|
Sensitive
|
La3;lineage4.9
|
None
|
SRR29096174
|
Sensitive
|
La1.7;lineage4.9
|
None
|
ERR4818110
|
Sensitive
|
lineage4.9
|
None
|
ERR2513121
|
Sensitive
|
lineage3.1.3
|
None
|
ERR4024991
|
Other
|
lineage4.8;lineage4.9
|
None
|
SRR5341469
|
HR-TB
|
lineage4.9
|
None
|
SRR1181402
|
Sensitive
|
lineage4.9
|
None
|
SRR1735598
|
RR-TB
|
lineage4.9
|
None
|
SRR5341387
|
Other
|
lineage4.9
|
None
|
SRR1173281
|
Other
|
lineage3
|
None
|
SRR1180355
|
Sensitive
|
lineage4.9
|
None
|
SRR19295647
|
Sensitive
|
lineage4.9
|
None
|
ERR6866022
|
Other
|
lineage4.8;lineage4.9
|
None
|
SRR1140724
|
Other
|
lineage2.2.1
|
None
|
SRR9971270
|
RR-TB
|
lineage2.2.1
|
None
|
SRR8692863
|
Other
|
lineage2.2;lineage4
|
None
|
SRR1140736
|
Other
|
lineage4.1.2.1
|
None
|
ERR4819809
|
HR-TB
|
lineage4.6.2.2
|
None
|
SRR1180410
|
Sensitive
|
lineage4.9
|
None
|
SRR7535082
|
Sensitive
|
lineage4.9
|
None
|
SRR6045010
|
Sensitive
|
lineage4.9
|
None
|
ERR323062
|
Sensitive
|
lineage4.9
|
None
|
ERR3275190
|
Other
|
lineage3
|
nl
|
SRR1049674
|
HR-TB
|
lineage2.2.1
|
None
|
SRR11342662
|
MDR-TB
|
lineage4.8.1
|
None
|
SRR1180250
|
Other
|
lineage4.9
|
None
|
ERR137286
|
Other
|
lineage4.9
|
None
|
SRR1180406
|
Sensitive
|
lineage4.9
|
None
|
ERR736872
|
HR-TB
|
lineage4.9
|
None
|
SRR11342658
|
RR-TB
|
lineage4.1.2
|
None
|
SRR9971041
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR3283028
|
Other
|
La3;lineage4
|
None
|
ERR4821143
|
Other
|
lineage4.9
|
None
|
ERR9787336
|
RR-TB
|
lineage6.1.3
|
None
|
ERR502474
|
RR-TB
|
lineage4.9
|
None
|
SRR1172717
|
Sensitive
|
lineage4.9
|
None
|
ERR9786592
|
Other
|
lineage4.3.4.2
|
None
|
ERR4818393
|
RR-TB
|
lineage3;lineage4
|
None
|
ERR4816717
|
RR-TB
|
lineage3.1.2.1
|
None
|
ERR6358979
|
Other
|
lineage4.9
|
None
|
SAMEA3501073
|
RR-TB
|
lineage4.8
|
None
|
ERR4821172
|
RR-TB
|
lineage4.9
|
None
|
ERR702405
|
Sensitive
|
lineage4.9
|
None
|
SRR1181237
|
Sensitive
|
lineage2.2.1;lineage4
|
None
|
ERR987765
|
Sensitive
|
lineage4.6.1.1
|
None
|
SRR1184021
|
Sensitive
|
lineage4.9
|
None
|
ERR4831616
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR867567
|
RR-TB
|
lineage3
|
None
|
SRR10315751
|
MDR-TB
|
lineage4.8
|
None
|
ERR3283014
|
Sensitive
|
La3;lineage4.9
|
None
|
ERR1063855
|
Other
|
lineage4.9
|
None
|
SRR3675235
|
Sensitive
|
lineage4.9
|
None
|
ERR1063883
|
HR-TB
|
lineage4.9
|
None
|
ERR4819051
|
Sensitive
|
lineage4.9
|
None
|
SRR1181283
|
Sensitive
|
lineage4.9
|
None
|
ERR4816470
|
HR-TB
|
lineage3
|
None
|
SRR10315567
|
HR-TB
|
lineage2.2.1
|
None
|
SRR9970981
|
RR-TB
|
lineage4.3.2.1
|
None
|
ERR9896153
|
RR-TB
|
lineage4.4.1.1
|
None
|
ERR751326
|
Other
|
lineage4.9
|
None
|
SRR1183054
|
Sensitive
|
lineage4.9
|
None
|
ERR4815909
|
Other
|
lineage4.8
|
None
|
ERR4820265
|
Other
|
lineage4.1.2.1
|
None
|
ERR3797064
|
Other
|
La3;lineage4.9
|
None
|
ERR978767_ERR978765_ERR978766
|
RR-TB
|
lineage4.8
|
None
|
ERR4817554
|
Other
|
lineage1.1.1
|
None
|
SRR11342644
|
MDR-TB
|
lineage4.4.1.1.1
|
None
|
SRR1173740
|
Other
|
lineage3;lineage4
|
None
|
ERR3797065
|
RR-TB
|
lineage4.9
|
None
|
ERR502470
|
RR-TB
|
lineage4.9
|
None
|
ERR4820833
|
Other
|
lineage3;lineage4.9
|
None
|
SRR16278274
|
Other
|
La1.4
|
None
|
SRR6045892
|
Sensitive
|
lineage4.9
|
None
|
SRR1196478
|
Other
|
lineage4.9
|
None
|
SRR6046737
|
Other
|
lineage4.9
|
None
|
SRR3675585
|
Sensitive
|
lineage4.9
|
None
|
SRR5341299
|
HR-TB
|
lineage4.9
|
None
|
ERR245675
|
Sensitive
|
lineage1.1.2
|
None
|
ERR4821222
|
Other
|
lineage4.3.2.1
|
None
|
ERR2851356
|
Sensitive
|
lineage4.9
|
None
|
ERR4769514
|
Other
|
La1.3
|
None
|
ERR4797264
|
Sensitive
|
lineage4.9
|
None
|
SRR1180996
|
Sensitive
|
lineage4.9
|
None
|
SRR1183965
|
Sensitive
|
lineage4.9
|
None
|
SRR1173770
|
Other
|
lineage4.9
|
None
|
ERR4797474
|
Sensitive
|
lineage4.9
|
None
|
SRR7070195
|
Sensitive
|
lineage3.1.2.1
|
None
|
SRR1180312
|
Sensitive
|
lineage4.9
|
None
|
SRR1049726
|
Other
|
lineage4.1.2.1;lineage4.4.1.1
|
None
|
SRR6046385
|
Sensitive
|
lineage4.9
|
None
|
SRR6045795
|
Sensitive
|
lineage2.2.1
|
None
|
ERR4796254
|
Sensitive
|
lineage4.9
|
None
|
ERR4815310
|
Other
|
lineage2.2.1;lineage4.9
|
None
|
ERR4815811
|
Other
|
lineage4.2.1.1
|
None
|
ERR4816745
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR1158918
|
Sensitive
|
lineage4.9
|
None
|
SRR1181325
|
Sensitive
|
lineage4.9
|
None
|
ERR867542
|
HR-TB
|
lineage4.2.1.1;lineage4.3.3
|
None
|
SRR1049673
|
Pre-XDR-TB
|
lineage3
|
None
|
SRR10315556
|
Sensitive
|
lineage2.2.1
|
None
|
SRR1180345
|
Other
|
lineage4.9
|
None
|
SRR1180375
|
Sensitive
|
lineage4.9
|
None
|
SRR1180391
|
Sensitive
|
lineage4.9
|
None
|
ERR4815225
|
Other
|
lineage1.2.2.2
|
None
|
SRR1792478
|
HR-TB
|
La1.7.1
|
None
|
SRR9970980
|
HR-TB
|
lineage4.1.2
|
None
|
ERR473277
|
HR-TB
|
La3;M.canetti;lineage4.9
|
None
|
SRR1791747
|
Other
|
La1.8.1
|
None
|
ERR3797048
|
Other
|
La3;lineage4.9
|
None
|
ERR4819307
|
Other
|
lineage4.3.2
|
None
|
SRR10315466
|
RR-TB
|
lineage2.2.1
|
None
|
SRR11342687
|
RR-TB
|
lineage4.2.2.2
|
None
|
ERR4872322
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR11342642
|
MDR-TB
|
lineage4.1.1.1
|
None
|
ERR176518
|
Sensitive
|
lineage4.3.4.2.1
|
None
|
SRR5341300
|
HR-TB
|
lineage4.9
|
None
|
ERR2446509
|
Other
|
lineage3
|
nl
|
SRR1175487
|
Sensitive
|
lineage4.9
|
None
|