Rv0668 - c.-267G>C
Note: the variant has been searched for in a non-representative convenience
dataset of samples from the ENA. This sampleset may contain overrepresentation
in certain categories such as geographic source, drug resistance type and
lineage. Interpretation of variant frequencies should be performed cautiously
with this in mind.
Drug resistance types
97 Sensitive
33 RR-TB
26 HR-TB
20 MDR-TB
7 Pre-XDR-TB
0 XDR-TB
67 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9 | 114 |
| lineage4.1.1.3.1;lineage4.9 | 1 |
| lineage3 | 7 |
| lineage2.2.1 | 20 |
| La3;lineage4.9 | 8 |
| lineage4.8 | 8 |
| lineage4.3.2 | 1 |
| lineage3.1.3 | 1 |
| lineage4.6.2.2 | 2 |
| lineage4.1.2.1 | 6 |
| lineage4.2.1 | 1 |
| lineage4.3.4.2.1 | 7 |
| lineage4 | 2 |
| lineage4.2.2.2 | 1 |
| lineage4.1.1.1 | 3 |
| lineage4.3 | 1 |
| La1.7.1 | 1 |
| lineage3;lineage4 | 2 |
| lineage4.3.4.1 | 2 |
| M.canetti;lineage4.9 | 1 |
| lineage2.2.1;lineage4.1.2.1 | 1 |
| lineage2.2.1;lineage4.9 | 3 |
| lineage4.8;lineage4.9 | 2 |
| La1.3 | 1 |
| lineage3.1.2.1 | 2 |
| lineage4.1.2.1;lineage4.4.1 | 1 |
| lineage4.2.1.1 | 1 |
| lineage4.4.1.1.1 | 3 |
| La3;lineage4 | 1 |
| lineage4.4.1.1 | 2 |
| lineage4.3.2.1 | 2 |
| lineage4.3.4.2 | 1 |
| lineage4.6.1.1 | 2 |
| lineage4.3.3;lineage4.9 | 1 |
| lineage2.2.2 | 1 |
| lineage4.1.1.3 | 2 |
| lineage4.1.2 | 2 |
| lineage4.8.1 | 1 |
| lineage1.2.1.2 | 1 |
| lineage1.1.3.1 | 2 |
| La1.8.1 | 3 |
| lineage3;lineage4.9 | 1 |
| lineage2.2.1.1 | 1 |
| lineage2.2;lineage4 | 1 |
| 1 | |
| lineage2;lineage4.9 | 1 |
| lineage1.2.2.2 | 1 |
| La3;M.canetti;lineage4.9 | 1 |
| lineage2.2.1;lineage4 | 1 |
| lineage2.2;lineage4.9 | 1 |
| lineage4.7 | 1 |
| lineage1.2.1.1 | 1 |
| lineage1.1.1 | 1 |
| lineage1.1.2 | 1 |
| lineage4.4.1.2 | 1 |
| La1.7;lineage3.1;lineage4 | 1 |
| La1.7;lineage4.9 | 2 |
| La1.4 | 1 |
| lineage6.1.3 | 1 |
| lineage6 | 1 |
| La1.6 | 1 |
| lineage4.3.3 | 2 |
| lineage3.1.1 | 1 |
| lineage4.1.2.1;lineage4.9 | 1 |
| lineage4.1.2.1;lineage4.4.1.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 250 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR736872 | HR-TB | lineage4.9 | None | SRR5007161 | RR-TB | lineage4.1.1.3.1;lineage4.9 | None | SRR5007165 | Other | lineage3 | None | SRR1180375 | Sensitive | lineage4.9 | None | SRR1062919 | HR-TB | lineage2.2.1 | None | SRR1159378 | Other | lineage4.9 | None | SRR1172717 | Sensitive | lineage4.9 | None | ERR6358979 | Other | lineage4.9 | None | ERR3797048 | Other | La3;lineage4.9 | None | SAMEA3501073 | RR-TB | lineage4.8 | None | ERR4819307 | Other | lineage4.3.2 | None | ERR4821172 | RR-TB | lineage4.9 | None | ERR4798099 | Other | lineage4.9 | None | SRR5341425 | Other | lineage4.9 | None | ERR4831616 | MDR-TB | lineage2.2.1 | None | SRR5341384 | HR-TB | lineage4.9 | None | ERR502510 | Sensitive | lineage4.9 | None | ERR2513121 | Sensitive | lineage3.1.3 | None | ERR3283031 | Sensitive | La3;lineage4.9 | None | ERR3283014 | Sensitive | La3;lineage4.9 | None | ERR1063855 | Other | lineage4.9 | None | SRR14801749 | HR-TB | lineage4.9 | None | ERR4819051 | Sensitive | lineage4.9 | None | SRR1181283 | Sensitive | lineage4.9 | None | SRR16156188 | Sensitive | lineage4.9 | None | ERR4819809 | HR-TB | lineage4.6.2.2 | None | ERR4819640 | RR-TB | lineage4.6.2.2 | None | ERR4872322 | Pre-XDR-TB | lineage2.2.1 | None | ERR4797184 | Sensitive | lineage4.9 | None | ERR4769474 | HR-TB | lineage4.9 | None | ERR6866125 | Sensitive | lineage4.1.2.1 | None | ERR867525 | Pre-XDR-TB | lineage2.2.1 | None | ERR867541 | MDR-TB | lineage4.2.1 | None | SRR5341461 | HR-TB | lineage4.9 | None | SAMN02380982 | MDR-TB | lineage4.3.4.2.1 | None | ERR3273109 | HR-TB | lineage4 | None | ERR4820030 | Other | lineage4.9 | None | SRR11342687 | RR-TB | lineage4.2.2.2 | None | SRR11342651 | MDR-TB | lineage4.1.1.1 | None | ERR867542 | HR-TB | lineage4.3 | None | SRR1792478 | HR-TB | La1.7.1 | None | SRR5818647 | Other | lineage4.3.4.2.1 | None | ERR4799378 | Sensitive | lineage4.9 | None | SRR21240055 | Other | lineage4.1.2.1 | None | ERR3797064 | Other | La3;lineage4.9 | None | ERR978767_ERR978765_ERR978766 | RR-TB | lineage4.8 | None | SRR12416842 | HR-TB | lineage4.9 | None | SRR3675246 | Other | lineage4.9 | None | SRR9971270 | RR-TB | lineage2.2.1 | None | SRR9971080 | RR-TB | lineage2.2.1 | None | SRR9970979 | Sensitive | lineage4.8 | None | SRR1173740 | Other | lineage3;lineage4 | None | SRR1175512 | Sensitive | lineage4.9 | None | ERR11465352 | Sensitive | lineage4.3.4.1 | None | SRR6045519 | MDR-TB | M.canetti;lineage4.9 | None | ERR11488822 | Pre-XDR-TB | lineage2.2.1;lineage4.1.2.1 | None | ERR779852 | Sensitive | lineage4.9 | None | ERR323085 | Sensitive | lineage4.9 | None | SRR1181390 | Sensitive | lineage2.2.1;lineage4.9 | None | ERR3283057 | Sensitive | La3;lineage4.9 | None | SRR1196478 | Other | lineage4.9 | None | ERR4024991 | Other | lineage4.8;lineage4.9 | None | ERR4769514 | Other | La1.3 | None | SRR5341469 | HR-TB | lineage4.9 | None | SRR20632814 | Sensitive | lineage4.9 | None | SRR5341387 | Other | lineage4.9 | None | SRR7070195 | Sensitive | lineage3.1.2.1 | None | ERR11465562 | Other | lineage4.1.2.1 | None | SRR1049725 | Other | lineage4.1.2.1;lineage4.4.1 | None | ERR4815310 | Other | lineage2.2.1;lineage4.9 | None | ERR4815811 | Other | lineage4.2.1.1 | None | SRR1175513 | Sensitive | lineage4.9 | None | SRR1180410 | Sensitive | lineage4.9 | None | SRR1049674 | HR-TB | lineage2.2.1 | None | SRR1158918 | Sensitive | lineage4.9 | None | SRR1175506 | Sensitive | lineage4.9 | None | SRR1180250 | Other | lineage4.9 | None | SRR1181325 | Sensitive | lineage4.9 | None | ERR137286 | Other | lineage4.9 | None | SRR1180406 | Sensitive | lineage4.9 | None | SRR1180345 | Other | lineage4.9 | None | SRR1181215 | Sensitive | lineage4.4.1.1.1 | None | ERR3283028 | Other | La3;lineage4 | None | SRR1172807 | Sensitive | lineage4.9 | None | SRR1180444 | Sensitive | lineage4.9 | None | ERR4819305 | Sensitive | lineage4.9 | None | ERR6866410 | Sensitive | lineage4.9 | None | SRR5341341 | Pre-XDR-TB | lineage2.2.1 | None | ERR13285068 | Sensitive | lineage4.9 | None | ERR4831617 | MDR-TB | lineage2.2.1 | None | SRR1184114 | Sensitive | lineage2.2.1;lineage4.9 | None | ERR323115 | Sensitive | lineage4.9 | None | SRR1180148 | Sensitive | lineage4.9 | None | SRR5341366 | Sensitive | lineage4.9 | None | ERR4815909 | Other | lineage4.8 | None | ERR4816866 | Other | lineage2.2.1 | None | ERR3797063 | Sensitive | La3;lineage4.9 | None | ERR4816745 | Pre-XDR-TB | lineage2.2.1 | None | ERR4819948 | Other | lineage4.4.1.1 | None | ERR4821222 | Other | lineage4.3.2.1 | None | ERR4816470 | HR-TB | lineage3 | None | ERR124636 | Sensitive | lineage4.9 | None | ERR3283047 | Sensitive | La3;lineage4.9 | None | ERR502473 | RR-TB | lineage4.9 | None | ERR9786592 | Sensitive | lineage4.3.4.2 | None | ERR3283011 | Other | La3;lineage4.9 | None | ERR502478 | RR-TB | lineage4.9 | None | SRR10315567 | Other | lineage2.2.1 | None | SRR10315751 | MDR-TB | lineage4.8 | None | ERR987765 | Sensitive | lineage4.6.1.1 | None | SRR10315556 | Sensitive | lineage2.2.1 | None | SRR11342636 | MDR-TB | lineage4.3.3;lineage4.9 | None | SRR11342664 | MDR-TB | lineage2.2.2 | None | SRR11342696 | MDR-TB | lineage4.4.1.1.1 | None | SRR11342647 | MDR-TB | lineage4.1.1.3 | None | SRR11342644 | MDR-TB | lineage4.4.1.1.1 | None | SRR11342658 | RR-TB | lineage4.1.2 | None | ERR11465509 | Sensitive | lineage4.3.4.2.1 | None | SRR11342662 | MDR-TB | lineage4.8.1 | None | SRR11342686 | MDR-TB | lineage4.8 | None | ERR751326 | Other | lineage4.9 | None | ERR867523 | Pre-XDR-TB | lineage2.2.1 | None | SRR1180319 | Sensitive | lineage4.9 | None | SRR1180977 | Sensitive | lineage4.9 | None | SRR11342660 | MDR-TB | lineage2.2.1 | None | ERR978767 | RR-TB | lineage4.8 | None | SRR20969475 | Other | lineage1.2.1.2 | None | ERR978766 | RR-TB | lineage4.8 | None | ERR1035122 | Sensitive | lineage4.9 | None | ERR6866639 | Other | lineage4.9 | None | ERR8479578 | Sensitive | lineage1.1.3.1 | None | SRR5341308 | Sensitive | lineage4.9 | None | SRR9970981 | RR-TB | lineage4.3.2.1 | None | SRR7240033 | Other | La1.8.1 | None | SRR9971112 | Other | lineage2.2.1 | None | SRR9970980 | Other | lineage4.1.2 | None | ERR1034634 | HR-TB | lineage4.9 | None | ERR3797065 | RR-TB | lineage4.9 | None | SRR6044835 | Other | lineage4.9 | None | SRR8758877 | MDR-TB | lineage4.1.1.1 | None | ERR502470 | RR-TB | lineage4.9 | None | ERR4820833 | Other | lineage3;lineage4.9 | None | SRR1181351 | Sensitive | lineage4.9 | None | SRR6046737 | Other | lineage4.9 | None | SRR3675585 | Sensitive | lineage4.9 | None | SRR5341299 | HR-TB | lineage4.9 | None | ERR2851356 | Sensitive | lineage4.9 | None | SRR1062918 | Other | lineage3 | None | ERR4819863 | RR-TB | lineage4.9 | None | SRR1180996 | Sensitive | lineage4.9 | None | ERR4831621 | MDR-TB | lineage2.2.1.1 | None | SRR1735598 | RR-TB | lineage4.9 | None | SRR1173281 | Other | lineage3 | None | SRR1180355 | Sensitive | lineage4.9 | None | ERR4797474 | Sensitive | lineage4.9 | None | ERR6866022 | Other | lineage4.8;lineage4.9 | None | SRR1140724 | Other | lineage2.2.1 | None | SRR6046385 | Sensitive | lineage4.9 | None | SRR8692863 | Other | lineage2.2;lineage4 | None | ERR323062 | Sensitive | lineage4.9 | None | ERR323066 | Sensitive | lineage4.9 | None | SRR1049675 | HR-TB | lineage2.2.1 | None | SRR1049673 | Pre-XDR-TB | lineage3 | None | ERR4821143 | Other | lineage4.9 | None | ERR1063896 | Sensitive | None | SRR1180300 | Sensitive | lineage4.9 | None | SRR1180391 | Sensitive | lineage4.9 | None | ERR502481 | RR-TB | lineage4.9 | None | ERR502474 | RR-TB | lineage4.9 | None | ERR502511 | Sensitive | lineage4.9 | None | SRR1180946 | Sensitive | lineage2;lineage4.9 | None | ERR5162090 | RR-TB | lineage4.9 | None | ERR4815225 | Other | lineage1.2.2.2 | None | ERR4818393 | RR-TB | lineage3;lineage4 | None | ERR4817204 | Other | lineage4.9 | None | ERR473277 | HR-TB | La3;M.canetti;lineage4.9 | None | SRR1791747 | Other | La1.8.1 | None | ERR11465351 | Sensitive | lineage4.1.2.1 | None | ERR702405 | Sensitive | lineage4.9 | None | SRR1181237 | Sensitive | lineage2.2.1;lineage4 | None | SRR1049672 | Other | lineage3 | None | SRR1184021 | Sensitive | lineage4.9 | None | SRR5341300 | HR-TB | lineage4.9 | None | ERR4815550 | Other | lineage2.2;lineage4.9 | None | ERR987707 | MDR-TB | lineage4.7 | None | ERR4814734 | Other | lineage1.2.1.1 | None | ERR6359066 | HR-TB | lineage4.9 | None | ERR867567 | RR-TB | lineage3 | None | ERR1199132 | Sensitive | lineage4.6.1.1 | None | SRR1175487 | Sensitive | lineage4.9 | None | ERR4816717 | RR-TB | lineage3.1.2.1 | None | ERR4817554 | Other | lineage1.1.1 | None | ERR4769433 | RR-TB | lineage4.9 | None | SRR3675235 | Sensitive | lineage4.9 | None | ERR1063883 | HR-TB | lineage4.9 | None | ERR245675 | Sensitive | lineage1.1.2 | None | ERR245794 | HR-TB | lineage4.3.4.2.1 | None | SRR1180420 | Sensitive | lineage4.9 | None | ERR323056 | HR-TB | lineage4.4.1.2 | None | ERR405219 | HR-TB | La1.7;lineage3.1;lineage4 | None | SRR3675461 | RR-TB | lineage4.9 | None | ERR176518 | Sensitive | lineage4.3.4.2.1 | None | ERR502479 | RR-TB | lineage4.9 | None | SRR29096174 | Sensitive | La1.7;lineage4.9 | None | SRR6789624 | HR-TB | lineage4.1.1.3 | None | ERR4819772 | Other | lineage1.1.3.1 | None | ERR9896153 | RR-TB | lineage4.4.1.1 | None | SRR6511621 | Sensitive | lineage4.9 | None | SRR1183054 | Sensitive | lineage4.9 | None | SRR16278274 | Other | La1.4 | None | SRR5341303 | Sensitive | lineage4.9 | None | ERR9787256 | Other | lineage6.1.3 | None | ERR9787336 | RR-TB | lineage6 | None | SRR1181349 | Sensitive | lineage4 | None | SRR10315466 | RR-TB | lineage2.2.1 | None | SRR10993951 | RR-TB | La1.6 | None | SRR11342642 | MDR-TB | lineage4.1.1.1 | None | ERR4820265 | Other | lineage4.1.2.1 | None | SRR5341453 | Other | lineage4.9 | None | SRR14801652 | HR-TB | lineage4.3.3 | None | ERR4820410 | RR-TB | lineage3.1.1 | None | SRR9971041 | MDR-TB | lineage4.3.3 | None | SRR26159066 | Sensitive | lineage4.9 | None | SRR1180399 | Sensitive | lineage4.9 | None | SRR1184329 | Other | lineage4.9 | None | ERR11465353 | Sensitive | lineage4.3.4.1 | None | SRR5341467 | Other | lineage4.9 | None | SRR1062928 | Other | lineage4.1.2.1;lineage4.9 | None | ERR4819383 | RR-TB | lineage4.9 | None | SRR1180413 | Sensitive | lineage4.9 | None | ERR11465511 | Other | lineage4.3.4.2.1 | None | SRR5341298 | Sensitive | lineage4.9 | None | SRR6045892 | Sensitive | lineage4.9 | None | ERR4818110 | Sensitive | lineage4.9 | None | ERR11465510 | Sensitive | lineage4.3.4.2.1 | None | ERR4797264 | Sensitive | lineage4.9 | None | SRR1181402 | Sensitive | lineage4.9 | None | SRR1183965 | Sensitive | lineage4.9 | None | ERR405209 | Sensitive | La1.7;lineage4.9 | None | SRR1173770 | Other | lineage4.9 | None | ERR3797087 | Sensitive | lineage4.9 | None | SRR19295647 | Sensitive | lineage4.9 | None | SRR1180312 | Sensitive | lineage4.9 | None | SRR1049726 | Other | lineage4.1.2.1;lineage4.4.1.1 | None | SRR6045795 | Sensitive | lineage2.2.1 | None | ERR4796254 | Sensitive | lineage4.9 | None | SRR1140736 | Other | lineage4.1.2.1 | None | SRR7236177 | Other | La1.8.1 | None | SRR7535082 | Sensitive | lineage4.9 | None | SRR6045010 | Sensitive | lineage4.9 | None |
|---|
