EBG00000313325 - n.1381C>T
Drug resistance types
126 Sensitive
42 RR-TB
47 HR-TB
56 MDR-TB
34 Pre-XDR-TB
1 XDR-TB
407 Other
lineage Counts
| lineage | Count |
|---|---|
| La3 | 2 |
| lineage4 | 22 |
| lineage4.1.1.3 | 8 |
| lineage4.9 | 278 |
| lineage4.1.2.1 | 21 |
| lineage2.2.1.1 | 6 |
| lineage1.1.3.1 | 2 |
| lineage4.3.4.2.1 | 21 |
| lineage3 | 25 |
| lineage2.2.1 | 69 |
| lineage4.3.2.1;lineage2.2.1 | 1 |
| La1.8.1 | 27 |
| lineage4.9;lineage4.2.1 | 1 |
| lineage1.2.2.2 | 3 |
| lineage3.1.2 | 3 |
| lineage3.1.2.2 | 1 |
| lineage4;lineage3 | 1 |
| 12 | |
| lineage4.4.1.1 | 4 |
| lineage4.1.2 | 11 |
| lineage1.2.1.2.1 | 5 |
| lineage4.1.1 | 2 |
| lineage4.2.1.1 | 3 |
| lineage4.7 | 4 |
| lineage4.4.1.2 | 2 |
| lineage5.1.1 | 2 |
| lineage4.1.1.2 | 2 |
| lineage2.2 | 5 |
| lineage4.3.2.1 | 7 |
| lineage2.2.2 | 8 |
| lineage4.8 | 22 |
| lineage4.9;lineage4.3.4.1 | 2 |
| lineage4.5 | 3 |
| lineage4.9;La1.8.1 | 1 |
| lineage4.3.3 | 10 |
| lineage4.6 | 1 |
| lineage4.6.1.1 | 4 |
| lineage4.6.1.2 | 4 |
| La1.8.2 | 6 |
| lineage4.2.1 | 4 |
| lineage4.3.4.2 | 5 |
| lineage4.3.4.1;lineage1.1.2 | 1 |
| lineage3.1.1 | 8 |
| lineage4.6.2.2 | 3 |
| lineage6.2.3;lineage1.1.2 | 1 |
| lineage1.1.2 | 12 |
| La1.3 | 2 |
| La1 | 1 |
| La1.2 | 14 |
| lineage4.6.4 | 1 |
| lineage1.1.1 | 4 |
| lineage4.2.2.2 | 1 |
| lineage1.1.3.2 | 4 |
| lineage1.1.1.1 | 1 |
| lineage4.1.2.1.1 | 1 |
| lineage4.4.1.1.1 | 2 |
| lineage6.1.1 | 1 |
| lineage4.8;lineage4.3.3 | 4 |
| lineage4.9;lineage2.2.1 | 2 |
| La1.6 | 2 |
| lineage2 | 1 |
| lineage1.1.3 | 2 |
| lineage4.9;lineage4.4.2 | 1 |
| La1.7.1 | 7 |
| lineage3.1.2.1 | 3 |
| lineage4.4.2 | 2 |
| lineage4.3.4.1 | 5 |
| lineage4.9.1 | 2 |
| lineage4.3.4 | 1 |
| lineage4.4.1 | 1 |
| lineage2.2.1.2 | 1 |
| lineage1.2.2.1 | 1 |
| lineage4.3.2.1;lineage3.1.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 713 |
Geographic prevalence
Country level data for this variant is available for 17 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR4820194 | Other | La3 | None | SRR5341467 | Other | lineage4 | None | ERR2660499 | Sensitive | lineage4.1.1.3 | None | ERR2693238 | HR-TB | lineage4.9 | None | ERR4820968 | Other | lineage4.1.2.1 | gb | SRR5341469 | Other | lineage4 | None | SRR5526841 | MDR-TB | lineage2.2.1.1 | None | ERR2660441 | Sensitive | lineage1.1.3.1 | None | ERR2660498 | Sensitive | lineage4.3.4.2.1 | None | ERR4821276 | Other | lineage3 | None | ERR2660536 | Sensitive | lineage2.2.1 | None | ERR2660542 | Sensitive | lineage4.3.2.1;lineage2.2.1 | None | ERR2747678 | Other | La1.8.1 | None | SRR6045604 | Sensitive | La3 | None | ERR4821747 | MDR-TB | lineage4.9;lineage4.2.1 | None | SRR6045635 | Other | lineage1.2.2.2 | gb | SRR6045683 | Other | lineage3.1.2 | None | SRR5818670 | Other | lineage4.1.2.1 | None | SRR6045158 | Other | lineage4.9 | None | SRR6044925 | Sensitive | lineage4.9 | None | SRR6045017 | Other | lineage3.1.2.2 | None | SRR6045992 | Other | lineage3 | None | SRR6046015 | Other | lineage4.9 | None | SRR6044830 | Other | lineage4.9 | None | SRR6045036 | Other | lineage4;lineage3 | None | SRR6045124 | Other | lineage4.9 | None | ERR2843536 | Other | lineage2.2.1 | None | SRR6046208 | Other | lineage4 | None | SRR6045379 | Other | None | SRR6046291 | Other | lineage3 | None | ERR2851371 | Other | lineage4.9 | None | SRR6045289 | Other | None | SRR6046246 | Other | lineage3 | None | ERR4828391 | Sensitive | lineage4.9 | None | SRR6046463 | Other | lineage4.4.1.1 | None | SRR6046607 | Other | lineage3 | None | SRR6046815 | Other | lineage3 | None | SRR6046851 | Other | lineage4 | None | SRR6397441 | Other | lineage4 | None | SRR6397389 | Sensitive | lineage4.1.2.1 | None | SRR6389899 | Other | lineage4.1.2 | None | SRR6397396 | HR-TB | lineage1.2.1.2.1 | None | SRR6397406 | Other | lineage4.1.2.1 | None | SRR6397575 | Other | lineage4.3.4.2.1 | None | SRR6152886 | HR-TB | lineage3 | None | SRR6397568 | Other | lineage4.1.1 | None | SRR6397727 | Other | lineage4.2.1.1 | None | SRR6152979 | Other | lineage4.7 | None | SRR6397638 | Other | lineage4.2.1.1 | None | SRR6153042 | Other | lineage4.4.1.1 | None | SRR6397642 | RR-TB | None | SRR6153036 | Other | None | SRR6484909 | Sensitive | lineage2.2.1 | None | SRR6397770 | Other | lineage4.7 | None | SRR6153231 | Sensitive | lineage4.4.1.2 | None | ERR502480 | Other | lineage5.1.1 | None | SRR6856094 | Other | lineage2.2.1 | None | ERR4872322 | Pre-XDR-TB | lineage2.2.1 | None | SRR6982088 | Other | lineage4.1.1.2 | None | SRR6982099 | Sensitive | lineage4.3.4.2.1 | None | SRR6832359 | Sensitive | lineage2.2.1 | None | SRR6982140 | Other | lineage2.2 | None | SRR6982194 | Other | lineage2.2.1 | None | SRR6982213 | Sensitive | lineage4.3.2.1 | None | SRR6982494 | Other | lineage2.2.2 | None | SRR6832504 | MDR-TB | lineage2.2.1 | None | SRR6832507 | Other | lineage4.8 | None | SRR6982275 | Other | lineage2.2.1 | None | SRR6824501 | Pre-XDR-TB | lineage2.2.1 | None | SRR6982349 | Sensitive | lineage2.2.1 | None | SRR6981966 | Other | lineage2.2.1 | None | SRR6824473 | MDR-TB | lineage2.2.1 | cn | SRR6982383 | Other | lineage4.3.2.1 | None | SRR6982053 | Sensitive | lineage4.9;lineage4.3.4.1 | None | SRR6824550 | Sensitive | lineage4.5 | None | SRR6982400 | Other | lineage2.2.1 | None | SRR6982066 | Other | lineage4.3.2.1 | None | ERR323036 | HR-TB | None | ERR5087846 | Other | La1.8.1 | None | ERR5087486 | Other | La1.8.1 | None | ERR5087500 | Other | La1.8.1 | None | ERR5087606 | Other | La1.8.1 | None | ERR5311076 | Other | La1.8.1 | None | ERR5087719 | Other | La1.8.1 | None | ERR5311088 | Other | La1.8.1 | None | ERR5311086 | Sensitive | lineage4.9;La1.8.1 | None | SRR7131047 | MDR-TB | lineage4.3.3 | None | SRR7131156 | Other | lineage4.6 | None | SRR8073606 | Other | La1.8.1 | None | SRR7131169 | Other | lineage4.1.2.1 | None | SRR7131185 | Other | lineage4.1.2.1 | None | SRR8346061 | Pre-XDR-TB | lineage2.2.1 | None | SRR7535053 | Sensitive | lineage3 | None | SRR7535073 | Sensitive | lineage4.6.1.1 | None | SRR7535077 | MDR-TB | lineage4.6.1.2 | None | SRR7535074 | Sensitive | lineage3 | None | SRR7535082 | Sensitive | lineage4 | None | SRR7535079 | Sensitive | lineage4.6.1.1 | None | SRR7535081 | Sensitive | lineage4.6.1.1 | None | SRR8600049 | Other | La1.8.1 | None | SRR7535080 | HR-TB | lineage4.8 | None | SRR7851307 | Other | La1.8.2 | None | SRR7645900 | Sensitive | lineage4.8 | None | SRR7645936 | Sensitive | lineage2.2.1 | None | SRR7755643 | Pre-XDR-TB | lineage4.2.1 | None | SRR7585435 | Other | lineage4.9 | None | SRR7645827 | Other | lineage4.2.1.1 | None | SRR7645828 | MDR-TB | lineage4.2.1 | None | SRR7645834 | Other | lineage2.2.1 | None | SRR7645879 | MDR-TB | lineage4.2.1 | None | ERR323048 | Pre-XDR-TB | lineage4.9 | None | DRR184644 | HR-TB | lineage2.2.1 | None | ERR323068 | Sensitive | lineage4.9 | None | ERR024351 | MDR-TB | lineage2.2.1 | None | DRR184982 | RR-TB | lineage2.2.1 | None | DRR185048 | Other | lineage2.2.1 | None | ERR036194 | Other | lineage4.6.1.2 | None | ERR036215 | Other | lineage4.8 | None | ERR036198 | Other | lineage4.3.4.2 | None | ERR036207 | Other | lineage4.9 | None | ERR036225 | Other | lineage4.3.4.2.1 | None | ERR036232 | Sensitive | lineage4.3.4.2.1 | mw | ERR036233 | Sensitive | lineage4.3.4.1;lineage1.1.2 | None | ERR037235 | Sensitive | lineage4.9 | None | ERR036242 | Sensitive | lineage4.3.4.2.1 | None | ERR037234 | Sensitive | lineage4.9 | None | ERR1034638 | Pre-XDR-TB | lineage2.2.1 | None | ERR038289 | Other | lineage4.3.3 | None | ERR1023527 | RR-TB | lineage4 | None | ERR037501 | Sensitive | lineage4.3.4.2.1 | None | ERR037529 | Other | lineage4.3.4.2.1 | None | ERR1034722 | Other | lineage4.9 | None | ERR1034692 | Other | lineage1.2.1.2.1 | None | ERR10762317 | Pre-XDR-TB | lineage4.2.1 | None | ERR1063873 | Sensitive | lineage4.3.4.2.1 | None | ERR1063890 | Sensitive | lineage3.1.1 | None | ERR1063847 | Sensitive | lineage3.1.1 | None | ERR1063882 | Sensitive | lineage4.3.4.2 | None | ERR1082121 | Sensitive | lineage4.9 | None | ERR108424 | Sensitive | lineage4.8 | None | ERR1082134 | Sensitive | lineage5.1.1 | None | ERR1203071 | Sensitive | lineage4.8 | None | ERR108444 | Other | lineage4.1.2 | ru | ERR108476 | Sensitive | lineage4.1.2.1 | None | ERR1144990 | Other | lineage4.8 | None | ERR126614 | Sensitive | lineage4.3.4.2.1 | None | ERR1203078 | Sensitive | lineage4.6.2.2 | None | ERR3324368 | RR-TB | lineage6.2.3;lineage1.1.2 | None | ERR133816 | MDR-TB | lineage2.2.1 | None | ERR3283013 | MDR-TB | lineage4 | None | ERR3283051 | Other | lineage4.9 | None | ERR3324325 | MDR-TB | lineage4.6.2.2 | None | ERR3804154 | Sensitive | lineage4.1.2.1 | None | ERR3439225 | Other | La1.8.1 | None | ERR3470663 | Sensitive | lineage3 | None | ERR3797043 | HR-TB | None | ERR4025018 | Other | lineage4.1.2.1 | None | ERR3806453 | Other | lineage4.3.4.2 | None | ERR4132447 | HR-TB | lineage4 | None | ERR4188213 | HR-TB | La1.8.1 | None | ERR4187800 | Other | La1.8.1 | None | ERR4187993 | Other | La1.8.1 | None | ERR4188021 | Other | La1.8.1 | None | ERR4187645 | Other | La1.8.1 | None | ERR4188403 | Other | La1.8.1 | None | ERR4596906 | Sensitive | lineage1.1.2 | None | ERR4627369 | Other | La1.8.1 | None | ERR4769429 | Other | lineage4.9 | None | ERR473303 | Sensitive | lineage4.9 | None | ERR473367 | Sensitive | lineage4.9 | None | ERR473278 | Sensitive | lineage4.9 | None | ERR473337 | Other | lineage4.1.2 | None | ERR4769424 | Sensitive | lineage4.9 | None | ERR4769462 | Other | La1.3 | None | ERR5864889 | MDR-TB | lineage2.2.1 | None | ERR4769482 | Sensitive | La1 | None | ERR4812328 | Other | lineage4.3.3 | pe | ERR5863930 | Pre-XDR-TB | lineage2.2.1 | None | ERR4769478 | Other | La1.2 | None | ERR4769506 | Sensitive | La1.3 | None | ERR4769537 | Sensitive | lineage4.9 | None | ERR4772210 | Other | La1.2 | None | ERR5863929 | Pre-XDR-TB | lineage2.2.1 | None | ERR5917985 | MDR-TB | lineage2.2.1 | None | ERR5865343 | MDR-TB | lineage2.2.1 | None | ERR5865950 | MDR-TB | lineage2.2.1 | None | ERR6052085 | Pre-XDR-TB | lineage2.2.2 | None | ERR5987219 | Pre-XDR-TB | lineage2.2.2 | None | ERR6149870 | Other | La1.8.2 | None | ERR6140667 | Other | La1.8.2 | None | ERR6052110 | Pre-XDR-TB | lineage2.2.2 | None | ERR6149868 | Other | La1.8.2 | None | ERR6149876 | Other | La1.8.2 | None | ERR6149874 | Other | La1.8.2 | None | ERR6197026 | RR-TB | lineage4.9 | None | ERR6197024 | RR-TB | lineage4.9 | None | ERR6201802 | Other | La1.2 | None | ERR6197044 | RR-TB | lineage4.9 | None | ERR6198389 | Other | La1.2 | None | ERR6198391 | Other | La1.2 | None | ERR6198394 | Other | La1.2 | None | ERR6201798 | Other | La1.2 | None | ERR6201814 | Other | La1.2 | None | ERR6201843 | Other | La1.2 | None | ERR6338288 | Other | La1.2 | None | ERR6201910 | Other | La1.2 | None | ERR6201832 | Other | La1.2 | None | ERR6201937 | Other | La1.2 | None | ERR6362858 | Pre-XDR-TB | lineage2.2.2 | None | ERR6362363 | RR-TB | lineage4.8 | None | ERR736808 | Sensitive | lineage2.2.1 | None | ERR6865587 | Other | lineage4.1.2.1 | None | ERR702437 | HR-TB | lineage4.6.4 | None | ERR718268 | Sensitive | lineage1.1.1 | None | ERR6397161 | Other | lineage4.2.2.2 | None | ERR736805 | Sensitive | lineage2.2.1 | None | ERR751865 | Other | lineage1.1.1 | None | ERR736822 | Sensitive | lineage4.4.1.2 | None | ERR736879 | Sensitive | lineage1.1.3.2 | None | ERR751729 | Other | lineage1.1.1 | None | ERR779662 | Sensitive | lineage3.1.1 | None | ERR752012 | HR-TB | lineage1.1.1.1 | None | ERR760877 | MDR-TB | lineage4.1.2.1.1 | None | ERR7801178 | Other | lineage4.3.4.2.1 | None | ERR7821134 | Sensitive | lineage4.3.2.1 | None | ERR7801177 | Other | lineage4.3.4.2.1 | None | ERR8975044 | Other | lineage4.1.1.2 | None | ERR7821131 | MDR-TB | lineage4.4.1.1.1 | None | ERR9117681 | Other | lineage4.3.3 | None | ERR9786844 | Other | lineage4.3.4.2 | None | ERR9117714 | Other | lineage3.1.2 | None | ERR970449 | RR-TB | lineage4.1.1.3 | None | ERR9786164 | RR-TB | lineage4.1.1.3 | None | ERR9786447 | Sensitive | lineage4.1.2.1 | None | ERR9786558 | Sensitive | lineage4.3.4.2 | None | ERR9787323 | Sensitive | lineage6.1.1 | None | ERR987704 | HR-TB | lineage4.6.1.2 | None | SRR1013530 | HR-TB | lineage4.9 | None | ERR987707 | MDR-TB | lineage4.7 | None | ERR987719 | HR-TB | lineage3 | None | SRR1011488 | Other | lineage2.2.1 | None | SRR1013527 | RR-TB | lineage2.2 | None | SRR1013531 | MDR-TB | lineage4.9 | None | ERR987733 | RR-TB | lineage4.6.1.1 | None | ERR9992879 | XDR-TB | lineage4.3.3 | None | SRR1011480 | MDR-TB | lineage4.8 | None | SRR1013528 | Pre-XDR-TB | lineage2.2 | None | SRR10315641 | MDR-TB | lineage4.4.1.1.1 | None | SRR10315603 | MDR-TB | lineage4.8 | None | SRR1049677 | MDR-TB | lineage4.8;lineage4.3.3 | None | SRR1049676 | MDR-TB | lineage4.8;lineage4.3.3 | None | SRR1062864 | Sensitive | lineage4.9;lineage2.2.1 | None | SRR1062820 | Pre-XDR-TB | lineage2.2.1 | None | SRR1062851 | MDR-TB | lineage4.8 | None | SRR1062859 | Sensitive | lineage2.2.1 | None | SRR1062869 | Pre-XDR-TB | lineage4.9 | None | SRR1062865 | HR-TB | lineage2.2.2 | None | SRR1062867 | RR-TB | lineage4.9;lineage2.2.1 | None | SRR1062868 | HR-TB | lineage4.9 | None | SRR1062920 | MDR-TB | lineage4.8;lineage4.3.3 | None | SRR10869302 | MDR-TB | lineage4.3.2.1 | None | SRR10869254 | Pre-XDR-TB | lineage2.2.1 | None | SRR10869241 | Pre-XDR-TB | lineage2.2.1 | None | SRR10993953 | Other | La1.6 | None | SRR1106670 | Other | lineage4.9 | None | SRR10993957 | Other | La1.6 | None | SRR1140574 | MDR-TB | lineage4.8;lineage4.3.3 | None | SRR11349188 | MDR-TB | lineage4.1.2.1 | None | SRR1141261 | MDR-TB | lineage4.9 | None | SRR1159158 | Other | lineage2.2.1 | None | SRR1172808 | Other | lineage4.9 | None | SRR1162501 | Other | lineage2.2.1 | None | SRR1172911 | Sensitive | lineage3 | None | SRR1172938 | MDR-TB | lineage3 | None | SRR1173055 | MDR-TB | lineage2.2.1 | None | SRR1173025 | Other | lineage4.9 | None | SRR1173185 | HR-TB | lineage4.9 | None | SRR1173450 | RR-TB | lineage4.9 | None | SRR1173416 | Other | lineage4.9 | None | SRR1173384 | Other | lineage4 | None | SRR1173706 | Other | lineage4.9 | None | SRR1173566 | Other | lineage1.1.2 | None | SRR1173720 | Other | lineage4.9 | None | SRR1175132 | HR-TB | lineage3 | None | SRR1174291 | HR-TB | lineage1.1.2 | None | SRR1175491 | MDR-TB | lineage4 | None | SRR1175151 | MDR-TB | lineage3 | None | SRR1175474 | HR-TB | lineage4.9 | None | SRR1175472 | MDR-TB | lineage4 | None | SRR1175473 | Other | lineage4.9 | None | SRR1180252 | Other | lineage4.9 | None | SRR1180237 | Sensitive | lineage4.1.2 | None | SRR1181161 | Other | lineage4.9 | None | SRR1180982 | Other | lineage2.2.1 | None | SRR1181085 | Sensitive | lineage4.1.2 | None | SRR1181242 | Sensitive | lineage4.1.2 | None | SRR1181368 | Other | lineage4.9 | None | SRR1181250 | Other | lineage4.9 | None | SRR1182994 | Sensitive | lineage4.1.2 | None | SRR1183080 | RR-TB | lineage4.9 | None | SRR1183958 | Other | lineage2.2.1 | None | SRR11871419 | Pre-XDR-TB | lineage2.2.1 | None | SRR1184329 | MDR-TB | lineage4.9 | None | SRR1184383 | Other | lineage4.9 | None | SRR11972264 | Pre-XDR-TB | lineage2.2.1.1 | None | SRR1196478 | MDR-TB | lineage4.9 | None | SRR11972212 | MDR-TB | lineage2.2.1.1 | None | SRR1196582 | Other | lineage4.9 | None | SRR11972274 | RR-TB | lineage1.2.1.2.1 | None | SRR11972378 | MDR-TB | lineage1.1.2 | None | SRR11972420 | MDR-TB | lineage2.2.1 | None | SRR11972390 | MDR-TB | lineage2.2.1 | None | SRR11972438 | HR-TB | lineage1.1.1 | None | SRR11972425 | Pre-XDR-TB | lineage2.2.1 | None | SRR124452 | HR-TB | lineage2 | None | SRR12199410 | Sensitive | lineage1.1.3 | None | SRR12199465 | Sensitive | lineage2.2.1.1 | None | SRR12199461 | Sensitive | lineage1.1.3.1 | None | SRR12199468 | Sensitive | lineage4.9;lineage4.4.2 | None | SRR124451 | HR-TB | None | SRR13199738 | Other | La1.7.1 | None | SRR124453 | HR-TB | None | SRR12634609 | MDR-TB | lineage3.1.1 | None | SRR12882631 | Other | lineage3.1.2.1 | None | SRR12882020 | Other | lineage3.1.1 | None | SRR12882699 | Sensitive | lineage1.1.2 | None | SRR13199726 | Other | La1.2 | None | SRR13199746 | Other | La1.7.1 | None | SRR13591410 | Other | lineage4.9;lineage4.3.4.1 | None | SRR13861141 | HR-TB | lineage4.9 | None | SRR13861144 | Other | lineage4.9 | None | SRR13861147 | Other | lineage4.9 | None | SRR13861142 | Other | lineage4.9 | None | SRR13861143 | Other | lineage4.9 | None | SRR13861158 | Other | lineage4.9 | None | SRR13861150 | Other | lineage4.9 | None | SRR13861159 | Other | lineage4.9 | None | SRR13861156 | Other | lineage4.9 | None | SRR13861157 | Other | lineage4.9 | None | SRR13861164 | Other | lineage4.9 | None | SRR13861162 | Other | lineage4.9 | None | SRR13861161 | Other | lineage4.9 | None | SRR13861183 | Other | lineage4.9 | None | SRR13861174 | Other | lineage4.9 | None | SRR13861180 | Other | lineage4.9 | None | SRR13861175 | Other | lineage4.9 | None | SRR13861179 | Other | lineage4.9 | None | SRR13861182 | RR-TB | lineage4.9 | None | SRR13861186 | Other | lineage4.9 | None | SRR13861188 | Other | lineage4.9 | None | SRR13861195 | Other | lineage4.9 | None | SRR13861200 | Other | lineage4.9 | None | SRR13861187 | Other | lineage4.9 | None | SRR13861201 | Other | lineage4.9 | None | SRR13861232 | RR-TB | lineage4.9 | None | SRR13861206 | Other | lineage4.9 | None | SRR13861219 | Other | lineage4.9 | None | SRR13861231 | Other | lineage4.9 | None | SRR13861207 | Other | lineage4.9 | None | SRR13861213 | Other | lineage4.9 | None | SRR13861217 | Other | lineage4.9 | None | SRR13861227 | Other | lineage4.9 | None | SRR13861230 | Other | lineage4.9 | None | SRR13861243 | HR-TB | lineage4.9 | None | SRR13861240 | HR-TB | lineage4.9 | None | SRR13861236 | RR-TB | lineage4.9 | None | SRR13861246 | Other | lineage4.9 | None | SRR13861244 | Other | lineage4.9 | None | SRR13861258 | Other | lineage4.9 | None | SRR13861248 | HR-TB | lineage4.9 | None | SRR13861254 | Other | lineage4.9 | None | SRR13861264 | HR-TB | lineage4.9 | None | SRR13861263 | Other | lineage4.9 | None | SRR13861267 | Other | lineage4.9 | None | SRR13861256 | Other | lineage4.9 | None | SRR13861282 | RR-TB | lineage4.9 | None | SRR13861268 | Other | lineage4.9 | None | SRR13861278 | Other | lineage4.9 | None | SRR13861274 | RR-TB | lineage4.9 | None | SRR13861281 | Other | lineage4.9 | None | SRR13861294 | Other | lineage4.9 | None | SRR13861283 | Other | lineage4.9 | None | SRR13861286 | Other | lineage4.9 | None | SRR13861297 | Other | lineage4.9 | None | SRR13861299 | RR-TB | lineage4.9 | None | SRR13861293 | Other | lineage4.9 | None | SRR13861307 | Other | lineage4.9 | None | SRR13861309 | HR-TB | lineage4.9 | None | SRR13861303 | Other | lineage4.9 | None | SRR13861304 | Other | lineage4.9 | None | SRR13861312 | Other | lineage4.9 | None | SRR13861318 | Other | lineage4.9 | None | SRR13861324 | Other | lineage4.9 | None | SRR13861314 | Other | lineage4.9 | None | SRR13861328 | Other | lineage4.9 | None | SRR13861325 | Other | lineage4.9 | None | SRR13861322 | Other | lineage4.9 | None | SRR13861330 | Other | lineage4.9 | None | SRR13861340 | Other | lineage4.9 | None | SRR13861331 | Other | lineage4.9 | None | SRR13861345 | Other | lineage4.9 | None | SRR13861343 | Other | lineage4.9 | None | SRR13861352 | Other | lineage4.9 | None | SRR13861351 | Other | lineage4.9 | None | SRR13861348 | Other | lineage4.9 | None | SRR13861356 | Other | lineage4.9 | None | SRR13861353 | Other | lineage4.9 | None | SRR13861374 | Other | lineage4.9 | None | SRR13861369 | Other | lineage4.9 | None | SRR13861373 | Other | lineage4.9 | None | SRR13861379 | Other | lineage4.9 | None | SRR13861361 | Other | lineage4.9 | None | SRR13861372 | Other | lineage4.9 | None | SRR13861375 | Other | lineage4.9 | None | SRR13861384 | HR-TB | lineage4.9 | None | SRR13861383 | Other | lineage4.9 | None | SRR13861377 | Other | lineage4.9 | None | SRR13861389 | Other | lineage4.9 | None | SRR13861387 | Other | lineage4.9 | None | SRR13861403 | Other | lineage4.9 | None | SRR13861394 | Other | lineage4.9 | None | SRR13861406 | MDR-TB | lineage4.9 | None | SRR13861410 | MDR-TB | lineage4.9 | None | SRR13861392 | Other | lineage4.9 | None | SRR13861397 | HR-TB | lineage4.9 | None | SRR13861411 | HR-TB | lineage4.9 | None | SRR13861416 | Other | lineage4.9 | None | SRR13861415 | Other | lineage4.9 | None | SRR13861423 | Other | lineage4.9 | None | SRR13861419 | Other | lineage4.9 | None | SRR13861418 | HR-TB | lineage4.9 | None | SRR13861421 | Other | lineage4.9 | None | SRR13861426 | Other | lineage4.9 | None | SRR13861428 | Other | lineage4.9 | None | SRR13861433 | Other | lineage4.9 | None | SRR13861429 | Other | lineage4.9 | None | SRR13861443 | RR-TB | lineage4.9 | None | SRR13861431 | Other | lineage4.9 | None | SRR13861430 | Other | lineage4.9 | None | SRR13861438 | Other | lineage4.9 | None | SRR13861450 | RR-TB | lineage4.9 | None | SRR13861446 | RR-TB | lineage4.9 | None | SRR13861449 | Other | lineage4.9 | None | SRR13861440 | RR-TB | lineage4.9 | None | SRR13861447 | RR-TB | lineage4.9 | None | SRR13861454 | RR-TB | lineage4.9 | None | SRR13861453 | Other | lineage4.9 | None | SRR13861457 | Other | lineage4.9 | None | SRR13861462 | Other | lineage4.9 | None | SRR13861459 | HR-TB | lineage4.9 | None | SRR13861463 | Other | lineage4.9 | None | SRR13861461 | Other | lineage4.9 | None | SRR13861481 | RR-TB | lineage4.9 | None | SRR13861482 | Other | lineage4.9 | None | SRR13861465 | RR-TB | lineage4.9 | None | SRR13861480 | Other | lineage4.9 | None | SRR13861491 | RR-TB | lineage4.9 | None | SRR13861486 | Other | lineage4.9 | None | SRR13861487 | Other | lineage4.9 | None | SRR13861495 | MDR-TB | lineage4.9 | None | SRR13861494 | Other | lineage4.9 | None | SRR13861493 | HR-TB | lineage4.9 | None | SRR13861498 | RR-TB | lineage4.9 | None | SRR13861507 | Other | lineage4.9 | None | SRR13861497 | HR-TB | lineage4.9 | None | SRR13861503 | Other | lineage4.9 | None | SRR13861499 | Other | lineage4.9 | None | SRR13861519 | Other | lineage4.9 | None | SRR13861514 | Other | lineage4.9 | None | SRR13861521 | Other | lineage4.9 | None | SRR13861515 | Other | lineage4.9 | None | SRR13861523 | Other | lineage4.9 | None | SRR13861531 | Other | lineage4.9 | None | SRR13861522 | Other | lineage4.9 | None | SRR13861534 | Other | lineage4.9 | None | SRR13861530 | RR-TB | lineage4.9 | None | SRR13861532 | Other | lineage4.9 | None | SRR13861533 | Other | lineage4.9 | None | SRR13861537 | Other | lineage4.9 | None | SRR13861535 | Other | lineage4.9 | None | SRR13861544 | Other | lineage4.9 | None | SRR13861545 | Other | lineage4.9 | None | SRR13861554 | Other | lineage4.9 | None | SRR13861555 | Other | lineage4.9 | None | SRR13861556 | Other | lineage4.9 | None | SRR13861568 | Other | lineage4.9 | None | SRR13861573 | Other | lineage4.9 | None | SRR13861574 | Other | lineage4.9 | None | SRR13861562 | Other | lineage4.9 | None | SRR13861559 | Other | lineage4.9 | None | SRR13861566 | Other | lineage4.9 | None | SRR13861567 | Other | lineage4.9 | None | SRR13861569 | Other | lineage4.9 | None | SRR13861572 | Other | lineage4.9 | None | SRR13861579 | Other | lineage4.9 | None | SRR13861587 | RR-TB | lineage4.9 | None | SRR13861589 | RR-TB | lineage4.9 | None | SRR13861597 | Other | lineage4.9 | None | SRR13861608 | Other | lineage4.9 | None | SRR13861607 | Other | lineage4.9 | None | SRR13861617 | Other | lineage4.9 | None | SRR13861630 | Other | lineage4.9 | None | SRR13861634 | HR-TB | lineage4.9 | None | SRR13861637 | Other | lineage4.9 | None | SRR13861576 | Other | lineage4.9 | None | SRR13861580 | Other | lineage4.9 | None | SRR13861584 | Other | lineage4.9 | None | SRR13861586 | Other | lineage4.9 | None | SRR13861598 | Other | lineage4.9 | None | SRR13861600 | Other | lineage4.9 | None | SRR13861624 | Other | lineage4.9 | None | SRR13861627 | Other | lineage4.9 | None | SRR13861626 | Other | lineage4.9 | None | SRR13861631 | RR-TB | lineage4.9 | None | SRR13861639 | Other | lineage4.9 | None | SRR13861641 | Other | lineage4.9 | None | SRR13861668 | Other | lineage4.9 | None | SRR13861648 | Other | lineage4.9 | None | SRR13861651 | Other | lineage4.9 | None | SRR13861654 | Other | lineage4.9 | None | SRR13861642 | Other | lineage4.9 | None | SRR13861646 | Other | lineage4.9 | None | SRR13861653 | Other | lineage4.9 | None | SRR13861658 | Other | lineage4.9 | None | SRR13861664 | Other | lineage4.9 | None | SRR13861680 | Other | lineage4.9 | None | SRR13861673 | Other | lineage4.9 | None | SRR13861677 | HR-TB | lineage4.9 | None | SRR13861679 | Other | lineage4.9 | None | SRR13861689 | Other | lineage4.9 | None | SRR13861683 | Other | lineage4.9 | None | SRR13861685 | Other | lineage4.9 | None | SRR13861694 | Other | lineage4.9 | None | SRR13861693 | Other | lineage4.9 | None | SRR13861692 | Other | lineage4.9 | None | SRR13861702 | Other | lineage4.9 | None | SRR13861697 | Other | lineage4.9 | None | SRR13861696 | Other | lineage4.9 | None | SRR13861717 | Other | lineage4.9 | None | SRR13861707 | Other | lineage4.9 | None | SRR13861714 | Other | lineage4.9 | None | SRR13861706 | Other | lineage4.9 | None | SRR13861711 | Other | lineage4.9 | None | SRR13861720 | Other | lineage4.9 | None | SRR13861718 | Other | lineage4.9 | None | SRR13861727 | Other | lineage4.9 | None | SRR13861735 | MDR-TB | lineage4.9 | None | SRR13861725 | Other | lineage4.9 | None | SRR13861724 | RR-TB | lineage4.9 | None | SRR13861734 | Other | lineage4.9 | None | SRR14801720 | RR-TB | lineage4.8 | None | SRR14782537 | Pre-XDR-TB | lineage2.2.1 | None | SRR14334194 | Pre-XDR-TB | lineage2.2.1 | None | SRR14782096 | MDR-TB | lineage2.2.1 | None | SRR14801294 | MDR-TB | lineage2.2.1 | None | SRR1573728 | Sensitive | lineage4.4.2 | None | SRR15508556 | Other | lineage4.3.4.1 | None | SRR15316549 | RR-TB | lineage4.4.2 | None | SRR1792011 | Other | La1.8.1 | None | SRR1791940 | Other | La1.8.1 | None | SRR17406750 | Other | lineage1.1.2 | None | SRR17832798 | Other | lineage3 | None | SRR1792012 | Other | La1.8.1 | None | SRR1792022 | Other | La1.8.1 | None | SRR1792140 | Other | La1.8.1 | None | SRR1792024 | Other | La1.8.1 | None | SRR1792025 | Other | La1.8.1 | None | SRR1792265 | Other | La1.8.1 | None | SRR1792232 | Other | La1.7.1 | None | SRR1792247 | Other | La1.7.1 | None | SRR18213726 | Other | lineage3 | None | SRR18002949 | Sensitive | lineage2.2.1 | None | SRR19612366 | Other | lineage4.5 | None | SRR18213736 | MDR-TB | lineage3 | None | SRR18213800 | Other | lineage3.1.2 | None | SRR18213909 | Other | lineage4.1.2.1 | None | SRR19303773 | Other | lineage4.6.2.2 | None | SRR2100067 | Other | lineage4.3.3 | None | SRR2101643 | Other | lineage2.2.1 | None | SRR2101505 | MDR-TB | lineage4.9.1 | None | SRR2101628 | Other | lineage4.3.2.1 | None | SRR21686601 | Other | lineage1.2.1.2.1 | None | SRR2101691 | Other | lineage2.2.1 | None | SRR21469201 | Other | La1.7.1 | None | SRR21469202 | Other | La1.7.1 | None | SRR21675949 | Other | lineage4.3.3 | None | SRR21676929 | Other | lineage1.2.1.2.1 | None | SRR21685367 | MDR-TB | lineage2.2.1 | None | SRR2101684 | Other | lineage2.2.1.1 | None | SRR21240064 | Sensitive | lineage4.3.3 | None | SRR21277822 | Sensitive | lineage2.2.1.1 | None | SRR21469200 | Other | La1.7.1 | None | SRR21595948 | Sensitive | lineage4.1.2.1 | None | SRR21686597 | Sensitive | lineage4.1.2.1 | None | SRR21728710 | Other | lineage4.1.1.3 | None | SRR21728339 | Other | lineage3 | None | SRR21711124 | Other | lineage1.1.3 | None | SRR21722120 | Sensitive | lineage4.1.2.1 | None | SRR3675460 | Sensitive | lineage4.1.1.3 | None | SRR21737226 | Sensitive | lineage4.5 | None | SRR22175227 | Pre-XDR-TB | lineage3 | None | ERR161033 | HR-TB | None | ERR176771 | Sensitive | None | ERR161014 | Sensitive | lineage4.3.4.2.1 | None | ERR190332 | Sensitive | lineage4.3.4.1 | None | ERR181940 | Sensitive | lineage3.1.1 | None | ERR1873563 | Pre-XDR-TB | lineage2.2.1 | None | ERR161045 | Sensitive | lineage4.3.4.2.1 | None | ERR4815795 | Other | lineage1.1.2 | None | SRR3105762 | HR-TB | None | ERR161125 | Sensitive | lineage4.3.4 | None | SAMN02419540 | Other | lineage2.2.1 | None | SRR3601585 | Pre-XDR-TB | lineage2.2 | None | ERR161150 | Sensitive | lineage4.3.4.2.1 | None | ERR161170 | Sensitive | lineage4.3.4.1 | None | SRR3619841 | Pre-XDR-TB | lineage2.2.1 | None | ERR163970 | Sensitive | lineage4.6.1.2 | None | SRR3619764 | Pre-XDR-TB | lineage2.2 | None | SRR3618864 | Pre-XDR-TB | lineage2.2.1 | None | ERR161201 | Sensitive | lineage1.1.3.2 | None | ERR1750889 | Other | lineage4.4.1.1 | None | ERR163988 | Sensitive | lineage4.1.2 | None | ERR181750 | Sensitive | lineage1.1.3.2 | None | ERR171135 | Other | lineage2.2.1 | za | ERR1750881 | Sensitive | lineage4.1.1.3 | zw | ERR181749 | Sensitive | lineage4.3.4.2.1 | None | ERR1750905 | Sensitive | lineage4.3.3 | za | ERR176475 | Sensitive | lineage4.3.4.2.1 | None | ERR1750930 | Sensitive | lineage4.1.1.3 | za | ERR1750926 | Other | lineage4.3.2.1 | za | ERR1750938 | Other | lineage4.4.1 | None | ERR176450 | Sensitive | lineage4.1.1 | None | ERR176470 | Other | lineage4.3.4.1 | mw | ERR1750907 | RR-TB | None | ERR176619 | Sensitive | lineage4.9 | None | ERR4816982 | Other | lineage4 | None | ERR4814901 | Other | lineage2.2.1 | gb | ERR176739 | Sensitive | lineage4.4.1.1 | None | ERR2228941 | Other | lineage4.8 | None | ERR192071 | Other | La1.8.1 | None | ERR190388 | Sensitive | lineage4.9 | None | ERR1873561 | Pre-XDR-TB | lineage2.2.2 | None | ERR1873463 | MDR-TB | lineage2.2.2 | None | ERR2229033 | Other | lineage4.8 | None | ERR212003 | Sensitive | lineage4.3.4.2.1 | None | ERR216930 | Sensitive | lineage4.3.4.1 | None | ERR212114 | Other | lineage4.3.4.2.1 | None | ERR4816429 | Other | lineage1.1.2 | None | ERR212035 | Sensitive | lineage4.3.4.2.1 | None | ERR212042 | HR-TB | lineage3.1.1 | None | ERR216950 | Other | lineage1.1.3.2 | None | ERR216949 | Sensitive | lineage4 | None | ERR216986 | Sensitive | lineage4.3.4.2.1 | None | ERR2229780 | Other | lineage4.9 | None | ERR2229358 | Other | lineage4.8 | None | ERR2229336 | Other | lineage4.8 | None | ERR2229332 | RR-TB | lineage4.8 | None | ERR2229337 | Other | lineage4.8 | None | ERR221583 | Sensitive | lineage4.1.2 | None | ERR2179850 | Sensitive | lineage4 | None | ERR2229781 | Other | lineage4.9 | None | SRR4033203 | Sensitive | lineage4.9 | None | ERR1873446 | Pre-XDR-TB | lineage4.1.1.3 | None | ERR221608 | Sensitive | lineage1.2.2.2 | None | ERR2228822 | Other | lineage4.9 | None | ERR2228859 | RR-TB | lineage4 | None | ERR2228873 | Other | lineage4.8 | None | ERR2228888 | Other | lineage4.8 | None | SAMN02350437 | MDR-TB | lineage4.8 | None | SRR5065440 | Other | lineage2.2.1.2 | None | ERR2228823 | Sensitive | lineage4 | None | ERR2228874 | Other | lineage4 | None | ERR245716 | Sensitive | lineage2.2.1 | None | ERR4817917 | Other | lineage2.2.1 | None | ERR4818188 | Other | lineage4.1.2.1 | None | SRR5065527 | Other | lineage2.2.1 | None | ERR245662 | Sensitive | lineage1.2.2.1 | None | ERR245846 | Sensitive | lineage2.2.1 | None | ERR245740 | Sensitive | lineage4.1.2 | None | ERR245764 | HR-TB | lineage3.1.1 | None | ERR2513223 | Other | lineage4.1.2.1 | None | ERR245795 | Sensitive | lineage4.3.2.1;lineage3.1.1 | None | ERR245810 | Sensitive | lineage4.9.1 | None | SRR5153236 | MDR-TB | lineage2.2.1 | None | ERR2446433 | Other | lineage4.1.2.1 | None | SRR5341375 | Other | lineage4.9 | None | SRR5007155 | HR-TB | lineage4.1.2.1 | None | ERR4819087 | Other | lineage4.3.3 | None | ERR2513711 | Sensitive | lineage1.2.2.2 | gb | ERR2514652 | Other | lineage4.7 | gb | SRR5341460 | Other | lineage3 | None | SRR5341396 | Other | lineage4 | None | ERR4820369 | Other | lineage2.2.1 | None | SAMN02598978 | HR-TB | lineage1.1.2 | None | SRR5341429 | HR-TB | lineage3.1.2.1 | None | ERR4820777 | Other | lineage4.1.2.1 | None | SRR5341387 | Other | lineage4 | None | SRR5341390 | HR-TB | lineage1.1.2 | None | SAMN02350446 | Sensitive | lineage2.2.1 | None | SRR5341407 | Pre-XDR-TB | lineage3.1.2.1 | None | SRR5341417 | Pre-XDR-TB | lineage3 | None | SRR5341423 | Other | lineage1.1.2 | None | SRR5341425 | Other | lineage4 | None | SRR5341430 | Other | lineage3 | None | SAMN02599061 | MDR-TB | lineage3 | None | SRR5341300 | Other | lineage4 | None | SRR5341310 | Other | lineage1.1.2 | None | SRR5341312 | Pre-XDR-TB | lineage2.2.1 | None | ERR2514943 | Other | lineage4.8 | gb | SRR5341319 | Other | lineage3 | None | ERR2515013 | Sensitive | lineage2.2.1 | None | ERR2515191 | Other | lineage2.2.1 | za | SAMN02585942 | Sensitive | lineage4.1.2 | None |
|---|
