EBG00000313325 - n.1446_1447insT
Drug resistance types
100 Sensitive
20 RR-TB
39 HR-TB
29 MDR-TB
22 Pre-XDR-TB
1 XDR-TB
93 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage2.2.1 | 34 |
| lineage4.9;lineage4.8.1;lineage4.1.1 | 1 |
| lineage2.2 | 3 |
| lineage4.1.2.1 | 11 |
| lineage4.9 | 69 |
| lineage4.4.1.1 | 1 |
| lineage1.2.1.1 | 1 |
| lineage4 | 48 |
| lineage2.1 | 1 |
| 29 | |
| lineage4.3.2.1 | 2 |
| lineage4.3.4.2.1 | 5 |
| lineage3 | 9 |
| lineage4.1.1 | 2 |
| lineage3.1.2.1 | 2 |
| lineage4.8 | 8 |
| lineage3.1.3 | 1 |
| lineage4.1 | 1 |
| lineage4.1.1.2 | 2 |
| lineage1.2.1.2.1 | 1 |
| lineage1.1.2 | 3 |
| lineage4.3.3 | 3 |
| lineage4.6.2.2 | 2 |
| lineage4.3.2 | 1 |
| lineage4.9;lineage2.1 | 1 |
| La1.8.1 | 9 |
| lineage4.9;lineage4.2.1 | 1 |
| lineage1.2.2.2 | 1 |
| lineage2.2.1.1 | 2 |
| lineage4.1.2;lineage3.1 | 1 |
| lineage4.1.2 | 3 |
| lineage4.7 | 2 |
| lineage4.2.1 | 5 |
| lineage4.3.4.1 | 2 |
| lineage4.2.1;lineage2.2.1 | 1 |
| lineage4.8.1 | 1 |
| lineage4.1.1.3 | 3 |
| lineage6.2.3;lineage1.1.2 | 1 |
| lineage4.9;La1.8.1 | 1 |
| lineage4;La1.3 | 1 |
| La1.2 | 2 |
| lineage4.9;La1.3 | 1 |
| lineage2.2.1.2 | 1 |
| lineage2.2.2 | 2 |
| lineage5.1.1 | 1 |
| lineage4.5 | 2 |
| lineage1.1.3.1 | 1 |
| lineage4.3.4.2 | 1 |
| lineage6.1.3 | 1 |
| lineage6 | 2 |
| lineage4.8;lineage4.3.3 | 4 |
| lineage4.4.1.1.1 | 2 |
| lineage4.9;lineage2.2 | 1 |
| lineage2 | 1 |
| lineage4.4 | 1 |
| lineage3.1.1 | 1 |
| lineage7;lineage2.2.1.2 | 1 |
| lineage4.4.2 | 1 |
| La1.7.1 | 3 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 304 |
Geographic prevalence
Country level data for this variant is available for 11 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR3619841 | Pre-XDR-TB | lineage2.2.1 | None | ERR779852 | Sensitive | lineage4.9;lineage4.8.1;lineage4.1.1 | None | SRR3601585 | Pre-XDR-TB | lineage2.2 | None | ERR4814690 | Sensitive | lineage2.2.1 | None | ERR4815783 | Other | lineage4.1.2.1 | gb | SRR3619764 | Pre-XDR-TB | lineage2.2 | None | SRR3618864 | Pre-XDR-TB | lineage2.2.1 | None | ERR4815471 | Other | lineage4.9 | None | ERR1750889 | Other | lineage4.4.1.1 | None | ERR171135 | Other | lineage2.2.1 | za | ERR4814734 | Other | lineage1.2.1.1 | None | SRR3675246 | Sensitive | lineage4 | None | ERR702405 | Sensitive | lineage2.1 | None | ERR1750907 | RR-TB | None | ERR1750926 | Other | lineage4.3.2.1 | za | ERR4816964 | Other | lineage4.9 | None | ERR176580 | Sensitive | lineage4.3.4.2.1 | None | SRR3675510 | Other | None | SRR5341384 | Sensitive | lineage4.9 | None | ERR212114 | Other | lineage4.3.4.2.1 | None | ERR4817109 | Other | lineage3 | None | ERR4816110 | Sensitive | lineage4.9 | gb | ERR4816738 | Sensitive | lineage4.9 | None | ERR4816711 | Sensitive | lineage4.1.1 | gb | ERR4816717 | RR-TB | lineage3.1.2.1 | None | ERR4817434 | Other | lineage3 | None | ERR4818710 | Sensitive | lineage4.9 | None | ERR4818233 | HR-TB | lineage4.8 | gb | ERR4817915 | RR-TB | lineage4.9 | None | ERR2513121 | Sensitive | lineage3.1.3 | None | ERR2446566 | Other | lineage4.1 | None | ERR4818110 | Sensitive | lineage4.9 | None | ERR2513259 | Other | lineage3 | None | ERR4818252 | Other | lineage4.1.1.2 | None | ERR245794 | HR-TB | lineage4.3.4.2.1 | None | ERR4819051 | Other | lineage4 | None | SRR5341453 | Sensitive | None | SRR5341412 | Pre-XDR-TB | lineage3 | None | ERR4818624 | Other | lineage4.3.4.2.1 | None | SRR5341366 | Sensitive | lineage4 | None | ERR4819119 | HR-TB | lineage1.2.1.2.1 | gb | ERR2513688 | Other | lineage1.1.2 | gb | SRR5341375 | Other | lineage4.9 | None | SRR5153091 | HR-TB | lineage4.3.3 | None | SRR5341387 | Other | lineage4 | None | ERR4819357 | Other | lineage4.9 | None | SRR5341425 | Other | lineage4 | None | SRR5341456 | Other | None | ERR4820130 | Other | lineage3 | None | SRR5341310 | Other | lineage1.1.2 | None | SRR5341319 | Other | lineage3 | None | SRR5341455 | Sensitive | lineage4 | None | SRR5341298 | Sensitive | lineage4 | None | SRR5341300 | Other | lineage4 | None | SRR5341299 | Sensitive | lineage4 | None | ERR4819809 | HR-TB | lineage4.6.2.2 | None | SRR5341303 | RR-TB | lineage4 | None | ERR4819876 | HR-TB | lineage4.3.4.2.1 | None | SRR5341308 | Sensitive | lineage4 | None | ERR4819910 | Other | lineage4.9 | None | ERR2517074 | Pre-XDR-TB | lineage3 | gb | ERR4820144 | Sensitive | lineage4.3.2 | None | SRR5341341 | Pre-XDR-TB | lineage2.2.1 | None | ERR4821276 | Other | lineage3 | None | ERR4819933 | Other | lineage4.9 | None | ERR502511 | Sensitive | lineage4.9;lineage2.1 | None | SRR6045480 | Other | lineage4.1.1 | None | SRR5341461 | Sensitive | lineage4 | None | SRR5341467 | Other | lineage4 | None | SRR5341465 | Pre-XDR-TB | lineage2.2.1 | None | SRR5341469 | Other | lineage4 | None | SRR5431730 | Other | La1.8.1 | None | ERR4821655 | Sensitive | lineage4 | None | ERR4821747 | MDR-TB | lineage4.9;lineage4.2.1 | None | SRR6046210 | Other | lineage4 | None | SRR6045635 | Other | lineage1.2.2.2 | gb | SRR6044780 | Other | lineage4.9 | None | SRR6045892 | Sensitive | None | SRR6044876 | Sensitive | lineage4 | None | SRR6045010 | Other | lineage4 | None | SRR6045002 | MDR-TB | lineage4.9 | None | SRR6045158 | Other | lineage4.9 | None | SRR6046253 | HR-TB | lineage4.9 | None | ERR4831620 | MDR-TB | lineage2.2.1 | None | SRR6046299 | HR-TB | None | SRR6046492 | Other | None | ERR4831117 | HR-TB | None | ERR4831617 | MDR-TB | lineage2.2.1 | None | ERR4829336 | Other | lineage4 | None | SRR6511621 | HR-TB | None | SRR6824501 | Pre-XDR-TB | lineage2.2.1 | None | ERR4831616 | MDR-TB | lineage2.2.1 | None | ERR4831621 | MDR-TB | lineage2.2.1.1 | None | ERR4831657 | MDR-TB | lineage2.2.1 | None | ERR4872322 | Pre-XDR-TB | lineage2.2.1 | None | SRR6982389 | Other | lineage4.1.2;lineage3.1 | None | ERR5087486 | Other | La1.8.1 | None | ERR502510 | Sensitive | lineage4 | None | ERR5087596 | Other | La1.8.1 | None | SRR9970978 | Sensitive | lineage4.1.2 | None | SRR9613550 | HR-TB | lineage4.1.2.1 | None | SRR9970980 | Other | lineage4.1.2 | None | SRR7535082 | Sensitive | lineage4 | None | SRR9971270 | RR-TB | lineage2.2.1 | None | SRR7645901 | MDR-TB | lineage2.2.1 | None | SRR9970979 | Sensitive | lineage4.8 | None | SRR9970981 | RR-TB | lineage4.3.2.1 | None | SRR7645899 | RR-TB | lineage2.2.1 | None | SRR7645906 | Other | lineage2.2.1 | None | SRR7645927 | Other | lineage4.8 | None | SRR7645928 | RR-TB | lineage4.7 | None | SRR7645971 | Other | lineage2.2.1 | None | SRR7645972 | MDR-TB | lineage4.2.1 | None | SRR7645977 | MDR-TB | lineage4.2.1 | None | SRR7645973 | Other | lineage4.3.4.1 | None | SRR7755645 | Pre-XDR-TB | lineage2.2.1 | None | SRR7646018 | MDR-TB | lineage4.2.1 | None | SRR9971080 | RR-TB | lineage2.2.1 | None | SRR8651616 | MDR-TB | lineage2.2.1 | None | SRR7755649 | MDR-TB | lineage4.2.1 | None | SRR7755652 | Pre-XDR-TB | lineage4.2.1;lineage2.2.1 | None | SRR7755655 | Other | lineage4.1.2.1 | None | SRR7755657 | Other | lineage4.8 | None | ERR036207 | Other | lineage4.9 | None | SRR7755688 | Pre-XDR-TB | lineage4.2.1 | None | SRR9971150 | RR-TB | lineage4.8.1 | None | ERR323048 | Pre-XDR-TB | lineage4.9 | None | ERR323066 | Sensitive | lineage4 | None | DRR184982 | RR-TB | lineage2.2.1 | None | ERR323085 | Sensitive | lineage4 | None | ERR1034647 | MDR-TB | lineage4.1.1.3 | None | ERR037234 | Sensitive | lineage4.9 | None | ERR1063883 | Sensitive | lineage4 | None | ERR1035122 | Sensitive | None | ERR1063896 | Sensitive | None | ERR1213932 | Sensitive | lineage4.1.2.1 | None | ERR323115 | Sensitive | lineage4 | None | ERR137286 | Sensitive | lineage4 | None | ERR3324368 | RR-TB | lineage6.2.3;lineage1.1.2 | None | ERR3273109 | MDR-TB | lineage4 | None | ERR3283055 | HR-TB | None | ERR3439489 | RR-TB | La1.8.1 | None | ERR3445504 | HR-TB | None | ERR3797021 | Other | La1.8.1 | None | ERR4024991 | Other | None | ERR3797046 | HR-TB | None | ERR3806850 | HR-TB | lineage4.1.2.1 | None | ERR4025018 | Other | lineage4.1.2.1 | None | ERR473323 | HR-TB | lineage4.9 | None | ERR4187652 | Other | lineage4.9 | None | ERR4187671 | Other | lineage4.9;La1.8.1 | None | ERR4188247 | HR-TB | None | ERR4188403 | Other | La1.8.1 | None | ERR473334 | HR-TB | lineage4.9 | None | ERR4797474 | Other | None | ERR4796929 | Sensitive | lineage4 | None | ERR473367 | Sensitive | lineage4.9 | None | ERR4769410 | Other | lineage4;La1.3 | None | ERR4769427 | Other | La1.2 | None | ERR4769442 | HR-TB | lineage4 | None | ERR4769446 | Sensitive | lineage4.9;La1.3 | None | ERR4769444 | HR-TB | lineage4.9 | None | ERR4769497 | HR-TB | La1.2 | None | ERR4796254 | Sensitive | lineage4 | None | ERR4796472 | Pre-XDR-TB | lineage2.2.1 | None | ERR4796577 | MDR-TB | None | ERR4797184 | Sensitive | lineage4 | None | ERR4797193 | HR-TB | lineage1.1.2 | None | ERR4797264 | Sensitive | None | ERR4798099 | Other | None | ERR4798823 | HR-TB | lineage4 | None | ERR4798898 | MDR-TB | lineage3.1.2.1 | None | ERR4799378 | Sensitive | lineage4 | None | ERR4808964 | RR-TB | lineage2.2.1 | None | ERR4799547 | Sensitive | lineage2.2.1 | None | ERR4799989 | Pre-XDR-TB | lineage2.2.1.2 | None | ERR4811493 | HR-TB | None | ERR4809333 | Pre-XDR-TB | lineage2.2.2 | None | ERR4812328 | Other | lineage4.3.3 | pe | ERR4811708 | HR-TB | lineage4 | None | ERR5917985 | MDR-TB | lineage2.2.1 | None | ERR6358951 | HR-TB | lineage4 | None | ERR6359070 | Other | lineage4.9 | None | ERR6358979 | Other | None | ERR6359069 | Other | lineage4.9 | None | ERR6865587 | Other | lineage4.1.2.1 | None | ERR6359074 | HR-TB | lineage4.9 | None | ERR6866022 | Other | None | ERR6866547 | Sensitive | lineage4 | None | ERR6866125 | Sensitive | lineage4.1.2.1 | None | ERR6866410 | Sensitive | None | ERR736834 | Sensitive | lineage4 | None | ERR6866639 | Other | None | ERR736848 | HR-TB | None | ERR736856 | HR-TB | lineage4 | None | ERR736872 | Sensitive | lineage4 | None | ERR751345 | Other | lineage5.1.1 | None | ERR751326 | Sensitive | lineage4 | None | ERR752229 | Other | lineage4.5 | None | ERR8479578 | Sensitive | lineage1.1.3.1 | None | ERR8975044 | Other | lineage4.1.1.2 | None | ERR9634265 | Sensitive | None | ERR9786076 | Sensitive | lineage3 | None | ERR970449 | RR-TB | lineage4.1.1.3 | None | ERR9786164 | RR-TB | lineage4.1.1.3 | None | ERR9786276 | Sensitive | lineage4.8 | None | ERR9786592 | Sensitive | lineage4.3.4.2 | None | ERR9786639 | Sensitive | lineage4.8 | None | ERR9786911 | HR-TB | lineage4.1.2.1 | None | SRR10315751 | MDR-TB | lineage4.8 | None | ERR9787256 | Other | lineage6.1.3 | None | ERR9787336 | Other | lineage6 | None | ERR9992879 | XDR-TB | lineage4.3.3 | None | ERR9787362 | Sensitive | lineage6 | None | ERR987707 | MDR-TB | lineage4.7 | None | SRR10033114 | Sensitive | lineage4.1.2.1 | None | SRR1049676 | MDR-TB | lineage4.8;lineage4.3.3 | None | SRR1049675 | HR-TB | lineage2.2.1 | None | SRR1049674 | HR-TB | lineage2.2.1 | None | SRR1049677 | MDR-TB | lineage4.8;lineage4.3.3 | None | SRR10808490 | Sensitive | lineage2.2.1.1 | None | SRR1062919 | HR-TB | lineage2.2.1 | None | SRR1062920 | MDR-TB | lineage4.8;lineage4.3.3 | None | SRR10808399 | Sensitive | lineage4 | None | SRR10869285 | Pre-XDR-TB | lineage2.2.2 | None | SRR10808668 | Sensitive | lineage2.2.1 | None | SRR10808805 | Sensitive | None | SRR10809074 | Sensitive | lineage4 | None | SRR11349145 | Pre-XDR-TB | lineage4.4.1.1.1 | None | SRR1140574 | MDR-TB | lineage4.8;lineage4.3.3 | None | SRR11349143 | Sensitive | lineage4.1.2 | None | SRR1173450 | RR-TB | lineage4.9 | None | SRR1140724 | HR-TB | lineage2.2.1 | None | SRR1158918 | Sensitive | lineage4 | None | SRR1172717 | Other | lineage4.9 | None | SRR1172807 | Sensitive | lineage4.9 | None | SRR1173185 | HR-TB | lineage4.9 | None | SRR1173568 | Other | lineage4.9 | None | SRR1173687 | Pre-XDR-TB | lineage2.2.1 | None | SRR1175473 | Other | lineage4.9 | None | SRR1173777 | Other | lineage4 | None | SRR1175487 | Sensitive | lineage4.9 | None | SRR1175474 | HR-TB | lineage4.9 | None | SRR1175472 | MDR-TB | lineage4 | None | SRR1175491 | MDR-TB | lineage4 | None | SRR1175513 | Other | lineage4.9 | None | SRR1175506 | Sensitive | lineage4.9 | None | SRR1175508 | Other | lineage4.9 | None | SRR1175512 | Sensitive | lineage4.9 | None | SRR1180391 | Sensitive | lineage4.9 | None | SRR1180345 | Other | lineage4.9 | None | SRR1180148 | Sensitive | lineage4.9 | None | SRR1180250 | Other | lineage4.9 | None | SRR1180300 | Sensitive | lineage4.9 | None | SRR1180312 | Sensitive | lineage4.9 | None | SRR1180319 | Sensitive | lineage4.9 | None | SRR1180355 | Sensitive | lineage4.9 | None | SRR1180375 | Sensitive | lineage4.9 | None | SRR1180410 | Sensitive | lineage4.9;lineage2.2 | None | SRR1180399 | Sensitive | lineage4.9 | None | SRR1180406 | Sensitive | lineage4.9 | None | SRR1180444 | Sensitive | lineage4.9 | None | SRR1180413 | Sensitive | lineage4.9 | None | SRR1180420 | Sensitive | lineage4.9 | None | SRR1180996 | HR-TB | lineage4 | None | SRR1180446 | Other | lineage4.9 | None | SRR1180977 | Sensitive | lineage4.9 | None | SRR1181214 | Other | lineage4.9 | None | SRR1181325 | Sensitive | lineage4.9 | None | SRR1181237 | Sensitive | lineage2.2 | None | SRR1181283 | Sensitive | lineage4.9 | None | SRR1181349 | Sensitive | lineage4.4.1.1.1 | None | SRR1181351 | Sensitive | lineage4.9 | None | SRR1181368 | Other | lineage4.9 | None | SRR1181402 | Sensitive | lineage4.9 | None | SRR1181390 | Sensitive | lineage2 | None | SRR1183054 | Sensitive | lineage4.9 | None | SRR1183965 | Sensitive | lineage4.9 | None | SRR1196478 | MDR-TB | lineage4.9 | None | SRR1184021 | Sensitive | lineage4.9 | None | SRR1184329 | MDR-TB | lineage4.9 | None | SRR11972327 | Pre-XDR-TB | lineage2.2.1 | None | SRR11972425 | Pre-XDR-TB | lineage2.2.1 | None | SRR12142339 | HR-TB | lineage2.2.1 | None | SRR16627752 | RR-TB | lineage4.4 | None | SRR12634609 | MDR-TB | lineage3.1.1 | None | SRR14801720 | RR-TB | lineage4.8 | None | SRR14801749 | Sensitive | None | SRR15508556 | Other | lineage4.3.4.1 | None | SRR20632814 | Sensitive | lineage4 | None | SRR18549032 | HR-TB | lineage7;lineage2.2.1.2 | None | SRR1791747 | Other | La1.8.1 | None | SRR1792011 | Other | La1.8.1 | None | SRR1792022 | Other | La1.8.1 | None | SRR18572454 | RR-TB | lineage4.9 | None | SRR19303773 | Other | lineage4.6.2.2 | None | SRR20969542 | Other | lineage4.4.2 | None | SRR21240161 | Sensitive | lineage4.1.2.1 | None | SRR21469200 | Other | La1.7.1 | None | SRR21469201 | Other | La1.7.1 | None | SRR21677886 | Sensitive | lineage4.9 | None | SRR21469202 | Other | La1.7.1 | None | SRR22424787 | Sensitive | lineage4.9 | None | SRR21713567 | Sensitive | lineage4.5 | None |
|---|
