EBG00000313325 - n.736A>C
Drug resistance types
110 Sensitive
90 RR-TB
84 HR-TB
92 MDR-TB
60 Pre-XDR-TB
1 XDR-TB
319 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage2.2.1 | 110 |
| lineage4.2.2.1 | 4 |
| lineage4.1.2 | 13 |
| lineage4.3.1.1 | 4 |
| lineage4.3.3 | 26 |
| lineage4.9 | 102 |
| 20 | |
| lineage1.1.3.2 | 2 |
| lineage4.1.2.1 | 55 |
| lineage3 | 52 |
| lineage4.6.2.2 | 12 |
| lineage4.8 | 66 |
| lineage4.1.1 | 7 |
| lineage4;lineage2.2.1 | 1 |
| lineage4.1.3 | 1 |
| lineage4.9;lineage4.2.1 | 1 |
| lineage4.1.1.3 | 14 |
| lineage4.4.1.1 | 22 |
| lineage4.1.1.3.1 | 5 |
| lineage4.2.1 | 6 |
| lineage4.2.2.2 | 3 |
| lineage4 | 27 |
| lineage3.1.1 | 11 |
| lineage1.1.3.3 | 1 |
| lineage3.1.2.2 | 1 |
| lineage1.1.2 | 6 |
| lineage4.3.1 | 1 |
| lineage4.5 | 4 |
| lineage4.7 | 5 |
| lineage4.6.5 | 3 |
| lineage4.4.1.2 | 3 |
| lineage4.2.1.1 | 3 |
| lineage4.1 | 3 |
| lineage6.2.1 | 1 |
| lineage6.3.1 | 2 |
| La1.8.1 | 10 |
| lineage4.3.4.1 | 7 |
| lineage4.6 | 3 |
| lineage4.3.2.1 | 4 |
| lineage4.4.2 | 8 |
| lineage4.3.4.2.1 | 6 |
| lineage4.4.1.1.1 | 2 |
| lineage1.1.1.1 | 1 |
| lineage4.2.2 | 1 |
| lineage4.9;lineage4.3.4 | 1 |
| lineage4.3.2 | 2 |
| lineage4.3 | 2 |
| lineage4.3.4 | 2 |
| lineage6.2.3;lineage1.1.2 | 1 |
| La1.7.X-unk4 | 1 |
| lineage6 | 4 |
| lineage6.1.1 | 1 |
| lineage5 | 2 |
| La1.3 | 6 |
| lineage2.2.2 | 20 |
| lineage1.2.2.2 | 4 |
| lineage5.1.1 | 1 |
| lineage4.7;lineage4.3.4.2 | 1 |
| lineage1.2.2.1 | 1 |
| lineage4.1.1.2 | 1 |
| lineage3.1.3 | 1 |
| lineage2.2 | 23 |
| lineage2.2.1.1 | 6 |
| lineage4.6.1.2 | 6 |
| lineage4.8;lineage4.3.3 | 4 |
| lineage4.9;lineage2.2.1 | 1 |
| lineage2.2.2;lineage2.2.1 | 2 |
| lineage1.1.3 | 1 |
| La2 | 1 |
| La1.7.1 | 3 |
| lineage3.1.2.1 | 4 |
| lineage3.1.2 | 2 |
| La1.6 | 1 |
| lineage4.3.4.2 | 2 |
| lineage1.2.1.1 | 1 |
| lineage6.2.3 | 1 |
| La1.8.2 | 1 |
| lineage3.1 | 1 |
| lineage4.9.1 | 1 |
| lineage1 | 2 |
| lineage1.1.3.1 | 2 |
| lineage4.1.1.3.1;lineage3.1.2 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 756 |
Geographic prevalence
Country level data for this variant is available for 102 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR6045520 | RR-TB | lineage2.2.1 | gb | ERR4821159 | MDR-TB | lineage4.2.2.1 | gb | ERR270777 | HR-TB | lineage4.1.2 | None | ERR4821176 | Pre-XDR-TB | lineage2.2.1 | None | ERR4821171 | Sensitive | lineage4.3.1.1 | gb | ERR4821958 | Other | lineage4.3.3 | gb | ERR4821915 | RR-TB | lineage4.9 | None | ERR4821214 | RR-TB | None | ERR4821917 | Sensitive | lineage1.1.3.2 | gb | ERR4821245 | Other | lineage4.1.2.1 | None | ERR4821276 | Other | lineage3 | None | ERR4821981 | Other | lineage4.1.2.1 | None | ERR4821360 | Other | lineage4.1.2.1 | None | ERR4821318 | HR-TB | lineage4.6.2.2 | gb | ERR4822021 | Other | lineage4.8 | gb | ERR4822043 | Other | lineage4.1.1 | None | ERR4821409 | Other | lineage4.8 | None | ERR4821408 | Sensitive | lineage4.1.2 | None | ERR4822157 | Sensitive | lineage4;lineage2.2.1 | gb | ERR4821488 | Sensitive | lineage4.1.3 | None | ERR4821736 | HR-TB | lineage2.2.1 | gb | ERR4822261 | RR-TB | lineage2.2.1 | None | ERR4821523 | Pre-XDR-TB | lineage2.2.1 | gb | ERR4821679 | Other | lineage4.3.3 | None | ERR4821747 | MDR-TB | lineage4.9;lineage4.2.1 | None | SRR6045603 | RR-TB | lineage4.1.1.3 | None | ERR4821746 | Other | lineage4.4.1.1 | gb | SRR6045565 | Other | lineage4.6.2.2 | None | SRR6045655 | Other | lineage4.1.1.3.1 | None | SRR6045664 | Other | lineage4.2.1 | None | SRR5818395 | Sensitive | lineage4.9 | None | SRR5818394 | Other | lineage4.9 | None | SRR5818399 | Sensitive | lineage4.9 | None | SRR5818397 | Other | lineage4.9 | None | SRR5818389 | Other | lineage4.9 | None | SRR5818388 | Other | lineage4.9 | None | SRR5818402 | Other | lineage4.9 | None | SRR5818400 | Other | lineage4.9 | None | SRR5818411 | MDR-TB | lineage4.9 | None | SRR5818396 | Other | lineage4.9 | None | SRR5818414 | Other | lineage4.9 | None | SRR5818408 | Other | lineage4.9 | None | SRR5818404 | Other | lineage4.9 | None | SRR5818406 | Other | lineage4.9 | None | SRR5818410 | Sensitive | lineage4.9 | None | SRR5818413 | HR-TB | lineage4.9 | None | SRR5818424 | Sensitive | lineage4.9 | None | SRR5818430 | Sensitive | lineage4.9 | None | SRR5818429 | Sensitive | lineage4.9 | None | SRR5818435 | Sensitive | lineage4.9 | None | SRR5818436 | Sensitive | lineage4.9 | None | SRR5818448 | Other | lineage4.9 | None | SRR5818437 | MDR-TB | lineage4.9 | None | SRR5818443 | Sensitive | lineage4.9 | None | SRR5818446 | Other | lineage4.9 | None | SRR5818421 | Sensitive | lineage4.9 | None | SRR5818439 | Sensitive | lineage4.9 | None | SRR5818460 | Other | lineage4.9 | None | SRR5818452 | Other | lineage4.9 | None | SRR5818449 | MDR-TB | lineage4.9 | None | SRR5818464 | Other | lineage4.9 | None | SRR5818444 | Sensitive | lineage4.9 | None | SRR5818461 | Sensitive | lineage4.9 | None | SRR5818466 | Other | lineage4.9 | None | SRR5818457 | Other | lineage4.9 | None | SRR5818463 | Sensitive | lineage4.9 | None | SRR5818462 | Other | lineage4.9 | None | SRR5818586 | RR-TB | lineage4.2.2.2 | None | SRR5818469 | Other | lineage4.9 | None | SRR5818663 | Sensitive | lineage4.1.2.1 | dj | SRR5818624 | Sensitive | lineage3 | None | SRR6045002 | MDR-TB | lineage4.9 | None | SRR6044817 | Other | lineage3 | None | SRR6044936 | Other | lineage4 | None | SRR6044983 | Other | lineage3.1.1 | None | SRR5818667 | Sensitive | lineage4.4.1.1 | dj | SRR6045849 | Other | lineage4.4.1.1 | None | SRR6044784 | MDR-TB | lineage3 | None | SRR6044958 | Other | lineage4.4.1.1 | None | SRR6045056 | Other | lineage2.2.1 | gb | SRR6045071 | Other | lineage4.3.1.1 | None | SRR6045312 | Other | lineage1.1.3.3 | None | SRR6046020 | Other | lineage3 | None | SRR6046208 | Other | lineage4 | None | SRR6045248 | Other | lineage3.1.1 | None | SRR6045267 | RR-TB | lineage4 | None | SRR6045175 | Other | lineage3.1.2.2 | None | ERR2851355 | MDR-TB | lineage3 | None | SRR6046343 | Other | lineage2.2.1 | None | SRR6045424 | Other | lineage1.1.2 | None | SRR6046246 | Other | lineage3 | None | SRR6046376 | Other | lineage3 | None | SRR6046420 | Other | lineage3 | None | ERR4829039 | RR-TB | lineage4.3.1 | None | ERR2851359 | Other | lineage4.9 | None | ERR4830778 | Pre-XDR-TB | lineage4.5 | None | ERR4829907 | HR-TB | lineage4.1.2.1 | it | ERR4829196 | Other | lineage4.1.2 | None | ERR4829623 | Sensitive | lineage4.8 | None | ERR4828879 | MDR-TB | lineage3 | None | SRR6046447 | Sensitive | lineage4.8 | gb | SRR6046602 | HR-TB | lineage4.1.2.1 | gb | SRR6046668 | Sensitive | lineage1.1.2 | gb | SRR6046616 | Other | lineage4.3.1.1 | None | SRR6046646 | Other | lineage4.7 | gb | SRR6046815 | Other | lineage3 | None | SRR6046679 | Other | lineage3 | gb | SRR6046733 | Pre-XDR-TB | lineage2.2.1 | None | SRR6046818 | Other | lineage4.2.1 | gb | SRR6046839 | Other | lineage4.9 | None | SRR6046860 | Other | lineage4.4.1.1 | None | SRR6046848 | Other | lineage4.6.5 | None | SRR6046852 | MDR-TB | lineage3 | None | SRR6982239 | HR-TB | lineage4.1.1.3 | None | SRR6397733 | Other | lineage4.4.1.2 | None | ERR4872322 | Pre-XDR-TB | lineage2.2.1 | None | SRR6785281 | Other | lineage4.2.1.1 | None | SRR6397579 | Other | lineage4.4.1.2 | ca | SRR6397640 | Other | lineage4.2.1.1 | None | SRR6397815 | Other | lineage4.4.1.1 | None | ERR2886463 | Sensitive | lineage2.2.1 | None | SRR6789624 | MDR-TB | lineage4.1 | None | SRR6982246 | Sensitive | lineage4 | None | ERR502525 | Sensitive | lineage6.2.1 | gh | SRR6824501 | Pre-XDR-TB | lineage2.2.1 | None | ERR323035 | Sensitive | lineage4.9 | None | ERR502523 | Other | lineage6.3.1 | None | ERR5087596 | Other | La1.8.1 | None | ERR5087846 | Other | La1.8.1 | None | ERR3275996 | HR-TB | lineage4.3.4.1 | nl | ERR5087486 | Other | La1.8.1 | None | SRR7131030 | Other | lineage4.1.2.1 | None | SRR9971246 | MDR-TB | lineage4.1.1.3 | None | SRR7131296 | Other | lineage4.3.3 | None | SRR7131054 | Sensitive | lineage4.1.2 | None | SRR7131156 | Other | lineage4.6 | None | SRR7131094 | Other | lineage4.3.3 | None | SRR7131114 | Other | lineage4.1.2 | None | SRR7131129 | Sensitive | lineage4.1.2.1 | None | SRR7131134 | Sensitive | lineage4.1.2.1 | None | SRR7517818 | MDR-TB | lineage2.2.1 | None | SRR9971065 | RR-TB | lineage2.2.1 | None | SRR8600288 | Other | La1.8.1 | None | SRR9970980 | Other | lineage4.1.2 | None | SRR9970981 | RR-TB | lineage4.3.2.1 | None | SRR9971046 | MDR-TB | lineage4.8 | None | SRR8651633 | Pre-XDR-TB | lineage4.4.2 | None | SRR9971080 | RR-TB | lineage2.2.1 | None | SRR9971088 | RR-TB | lineage2.2.1 | None | SRR9971114 | Other | lineage2.2.1 | None | SRR9971112 | Other | lineage2.2.1 | None | SRR9971113 | Other | lineage2.2.1 | None | SRR7765062 | Pre-XDR-TB | lineage4.1.2.1 | None | SRR9971144 | RR-TB | lineage2.2.1 | None | ERR323044 | HR-TB | lineage4.3.4.2.1 | None | SRR9217359 | MDR-TB | lineage1.1.2 | None | SRR9971197 | MDR-TB | lineage4.4.1.1.1 | None | DRR184982 | RR-TB | lineage2.2.1 | None | DRR034348 | Other | lineage2.2.1 | None | DRR185048 | Other | lineage2.2.1 | None | DRR185000 | Other | lineage1.1.1.1 | None | ERR019855 | Other | lineage3 | None | DRR188816 | Sensitive | lineage4.2.2 | None | ERR017781 | Other | lineage3 | None | ERR036207 | Other | lineage4.9 | None | ERR1023502 | MDR-TB | lineage2.2.1 | None | ERR038289 | Other | lineage4.3.3 | None | ERR10796558 | Sensitive | lineage4 | None | ERR1034647 | MDR-TB | lineage4.1.1.3 | None | ERR10762297 | MDR-TB | lineage4.2.1 | None | ERR10796552 | Sensitive | lineage4.3.4.1 | None | ERR10796555 | Other | lineage4.1.2.1 | None | ERR10762495 | MDR-TB | lineage2.2.1 | None | ERR10762248 | MDR-TB | lineage4.2.1 | None | ERR10796554 | Sensitive | lineage4.1.2 | None | ERR10796557 | Other | lineage4 | None | ERR10796572 | Other | lineage4.3.4.1 | None | ERR10796564 | Other | lineage4.3.3 | None | ERR10796566 | Other | lineage4.9;lineage4.3.4 | None | ERR10796561 | Other | lineage4.3.2 | None | ERR10796563 | Other | lineage4.3.3 | None | ERR10796565 | RR-TB | lineage4.9 | None | ERR10796574 | Other | lineage4.9 | None | ERR10796571 | Other | lineage4.9 | None | ERR10796576 | RR-TB | lineage4.9 | None | ERR10796575 | RR-TB | lineage4.9 | None | ERR10796577 | RR-TB | lineage4.9 | None | ERR10796578 | Other | lineage2.2.1 | None | ERR10796590 | Other | lineage4.9 | None | ERR10796580 | RR-TB | lineage4.6 | None | ERR10796582 | HR-TB | lineage4.3 | None | ERR10796591 | MDR-TB | lineage4.9 | None | ERR10796583 | Other | lineage2.2.1 | None | ERR10796598 | RR-TB | lineage4.9 | None | ERR10796593 | RR-TB | lineage4 | None | ERR10796596 | Other | lineage4.9 | None | ERR10796623 | Other | lineage4.1.1 | None | ERR10796615 | Other | lineage4 | None | ERR10796618 | Other | lineage4.3.4.1 | None | ERR10796620 | Other | lineage4.1.1 | None | ERR10796599 | Other | lineage4 | None | ERR3283046 | MDR-TB | lineage4.9 | None | ERR10796626 | Other | lineage4.1.2 | None | ERR10796627 | Other | lineage4 | None | ERR10796628 | Other | lineage4.3.3 | None | ERR10796631 | Other | lineage4.3.4 | None | ERR10796633 | RR-TB | lineage4.3.4 | None | ERR10796636 | Other | lineage4.1.2.1 | None | ERR10796635 | Other | lineage4 | None | ERR10796640 | Other | lineage4.1.2.1 | None | ERR3283033 | Sensitive | lineage4.9 | None | ERR108125 | Pre-XDR-TB | lineage4.9 | None | ERR3283051 | Other | lineage4.9 | None | ERR3283048 | HR-TB | lineage4.9 | None | ERR3324368 | RR-TB | lineage6.2.3;lineage1.1.2 | None | ERR3445487 | Other | La1.7.X-unk4 | None | ERR3797065 | MDR-TB | lineage4 | None | ERR4407536 | Sensitive | lineage4.4.1.1 | None | ERR3806588 | Other | lineage6 | None | ERR3801626 | Sensitive | lineage6.1.1 | None | ERR400319 | Other | lineage4.8 | gb | ERR4187652 | Other | lineage4.9 | None | ERR4192364 | Sensitive | lineage5 | None | ERR4769516 | Other | La1.3 | None | ERR4586795 | Other | La1.8.1 | None | ERR4596904 | MDR-TB | lineage3.1.1 | None | ERR4596944 | MDR-TB | lineage3.1.1 | None | ERR4769436 | Other | La1.3 | None | ERR4769453 | Other | La1.3 | None | ERR4769480 | Other | La1.3 | None | ERR473279 | Other | lineage4.9 | None | ERR4769508 | RR-TB | lineage4.9 | None | ERR4769512 | Sensitive | lineage4.9 | None | ERR4769539 | Sensitive | lineage4.9 | None | ERR4769517 | Other | La1.3 | None | ERR4769530 | RR-TB | lineage4.9 | None | ERR4772215 | Other | La1.3 | None | ERR4769553 | RR-TB | lineage4.9 | None | ERR4808964 | RR-TB | lineage2.2.1 | None | ERR4796351 | MDR-TB | lineage4.9 | None | ERR4809333 | Pre-XDR-TB | lineage2.2.2 | None | ERR4812328 | Other | lineage4.3.3 | pe | ERR4811708 | HR-TB | lineage4 | None | ERR4811101 | Other | lineage4.4.2 | None | ERR4812495 | Other | lineage4.1.2.1 | pe | ERR5864556 | Pre-XDR-TB | lineage2.2.1 | None | ERR5917985 | MDR-TB | lineage2.2.1 | None | ERR5908124 | Other | lineage4.8 | None | ERR7801176 | RR-TB | lineage4.6.5 | None | ERR6866241 | Other | lineage4.3.2 | None | ERR736820 | MDR-TB | lineage1.2.2.2 | None | ERR751345 | Other | lineage5.1.1 | None | ERR7801175 | RR-TB | lineage4.6.5 | None | ERR5987263 | MDR-TB | lineage2.2.1 | None | ERR6197021 | MDR-TB | lineage4.7;lineage4.3.4.2 | None | ERR9285979 | RR-TB | lineage3.1.1 | None | ERR9117711 | Other | lineage4.3.4.2.1 | None | ERR9117740 | Other | lineage3.1.1 | None | ERR9117763 | HR-TB | lineage3 | None | ERR9117806 | Other | lineage4.8 | None | ERR7821199 | Sensitive | lineage1.2.2.1 | None | ERR8774355 | MDR-TB | lineage2.2.1 | None | ERR8975044 | Other | lineage4.1.1.2 | None | ERR9029360 | MDR-TB | lineage2.2.1 | None | ERR9117760 | HR-TB | lineage4.3 | None | ERR9117781 | Other | lineage3.1.3 | None | ERR9117788 | Other | lineage3 | None | ERR9117842 | Sensitive | lineage3 | None | ERR9119733 | MDR-TB | lineage2.2.1 | None | ERR9786164 | RR-TB | lineage4.1.1.3 | None | ERR970449 | RR-TB | lineage4.1.1.3 | None | ERR987707 | MDR-TB | lineage4.7 | None | ERR9787033 | Sensitive | lineage6 | None | ERR983241 | MDR-TB | lineage2.2.1 | None | ERR9786613 | Sensitive | lineage4.1.2.1 | None | SRR1013531 | MDR-TB | lineage4.9 | None | ERR9896153 | RR-TB | lineage4.4.1.1 | None | ERR9992784 | Pre-XDR-TB | lineage2.2.2 | None | ERR9992879 | XDR-TB | lineage4.3.3 | None | SRR023450 | RR-TB | lineage2.2.1 | None | SRR023487 | RR-TB | lineage2.2.1 | None | SRR1013527 | RR-TB | lineage2.2 | None | SRR1013553 | Pre-XDR-TB | lineage2.2 | None | SRR1013554 | Pre-XDR-TB | lineage2.2 | None | SRR1013568 | Pre-XDR-TB | lineage2.2 | None | SRR1013578 | MDR-TB | lineage2.2 | None | SRR1013581 | Pre-XDR-TB | lineage2.2 | None | SRR1013583 | HR-TB | lineage2.2 | None | SRR1013584 | HR-TB | lineage2.2 | None | SRR1013589 | HR-TB | lineage2.2.1 | None | SRR1013595 | HR-TB | lineage3 | None | SRR1013596 | HR-TB | lineage3 | None | SRR1013598 | HR-TB | None | SRR1013599 | HR-TB | None | SRR1013600 | HR-TB | lineage2.2.1.1 | None | SRR1013601 | HR-TB | lineage2.2.1 | None | SRR1013604 | HR-TB | lineage2.2.1 | None | SRR1013608 | HR-TB | lineage2.2 | None | SRR1013610 | HR-TB | lineage4 | None | SRR1013613 | HR-TB | lineage2.2.1 | None | SRR1013617 | MDR-TB | None | SRR1013622 | Pre-XDR-TB | lineage2.2 | None | SRR1013630 | Pre-XDR-TB | lineage2.2 | None | SRR1013633 | MDR-TB | lineage2.2 | None | SRR10272567 | Sensitive | lineage4.3.3 | None | SRR10272566 | Other | lineage4.3.3 | None | SRR10315556 | Sensitive | lineage2.2.1 | None | SRR10315558 | Sensitive | lineage2.2.1 | None | SRR10315567 | Other | lineage2.2.1 | None | SRR10315696 | Sensitive | lineage4.3.2.1 | None | SRR1047996 | MDR-TB | lineage2.2.2 | None | SRR1048852 | Pre-XDR-TB | lineage4.9 | None | SRR1048865 | Pre-XDR-TB | lineage4.4.2 | None | SRR1048868 | Pre-XDR-TB | lineage2.2.2 | None | SRR1048966 | Pre-XDR-TB | lineage2.2.1 | None | SRR1048974 | HR-TB | lineage2.2.1 | None | SRR1048980 | HR-TB | lineage3 | None | SRR1048986 | HR-TB | lineage2.2.1 | None | SRR1048994 | HR-TB | lineage4.9 | None | SRR1048997 | HR-TB | lineage2.2.1 | None | SRR1049005 | MDR-TB | lineage2.2.2 | None | SRR1049026 | Pre-XDR-TB | None | SRR1049040 | MDR-TB | lineage2.2.1 | None | SRR1049041 | MDR-TB | None | SRR1049582 | MDR-TB | lineage4.6.1.2 | None | SRR1049677 | MDR-TB | lineage4.8;lineage4.3.3 | None | SRR1062864 | Sensitive | lineage4.9;lineage2.2.1 | None | SRR1062880 | MDR-TB | lineage4.6.1.2 | None | SRR1013565 | Pre-XDR-TB | lineage4.4.2 | None | SRR1013569 | Pre-XDR-TB | lineage2.2.1 | None | SRR1013582 | Pre-XDR-TB | lineage2.2.1 | None | SRR1013590 | HR-TB | lineage2.2.1 | None | SRR1013597 | HR-TB | lineage2.2 | None | SRR1013607 | HR-TB | lineage2.2 | None | SRR1013609 | HR-TB | lineage4 | None | SRR1013611 | HR-TB | lineage4 | None | SRR1013618 | MDR-TB | None | SRR1013621 | Pre-XDR-TB | lineage2.2 | None | SRR1013629 | Pre-XDR-TB | lineage2.2 | None | SRR1013634 | MDR-TB | lineage2.2 | None | SRR10315464 | MDR-TB | lineage4.4.1.1 | None | SRR10315579 | Other | lineage2.2.1.1 | None | SRR10315693 | RR-TB | lineage4.1.2 | None | SRR1047993 | HR-TB | lineage2.2.1 | None | SRR1048867 | Pre-XDR-TB | lineage2.2.2 | None | SRR1048870 | Pre-XDR-TB | lineage2.2 | None | SRR1048885 | MDR-TB | None | SRR1048886 | MDR-TB | lineage2.2 | None | SRR1048968 | HR-TB | lineage2.2.2;lineage2.2.1 | None | SRR1048975 | HR-TB | lineage2.2.1 | None | SRR1048982 | HR-TB | None | SRR1048983 | HR-TB | None | SRR1048987 | HR-TB | lineage2.2.1 | None | SRR1048991 | HR-TB | lineage2.2.2 | None | SRR1048993 | HR-TB | lineage4.9 | None | SRR1048995 | HR-TB | lineage4.5 | None | SRR1048998 | HR-TB | lineage2.2.1 | None | SRR1049004 | MDR-TB | lineage2.2.2 | None | SRR1049006 | MDR-TB | lineage2.2.2 | None | SRR1049007 | Pre-XDR-TB | lineage2.2.2 | None | SRR1049027 | Pre-XDR-TB | None | SRR1049581 | MDR-TB | lineage4.6.1.2 | None | SRR1049675 | HR-TB | lineage2.2.1 | None | SRR1049674 | HR-TB | lineage2.2.1 | None | SRR1049676 | MDR-TB | lineage4.8;lineage4.3.3 | None | SRR1062919 | HR-TB | lineage2.2.1 | None | SRR1062920 | MDR-TB | lineage4.8;lineage4.3.3 | None | SRR10869071 | MDR-TB | lineage2.2.1 | None | SRR10869254 | Pre-XDR-TB | lineage2.2.1 | None | SRR11349178 | MDR-TB | lineage4.4.1.1.1 | None | SRR11342634 | MDR-TB | lineage4.8 | None | SRR11342688 | Other | lineage4.2.2.2 | None | SRR11342690 | Sensitive | lineage4.1.2.1 | None | SRR11349172 | RR-TB | lineage4.3.2.1 | None | SRR1140712 | MDR-TB | lineage4.6.1.2 | None | SRR1140574 | MDR-TB | lineage4.8;lineage4.3.3 | None | SRR1140724 | HR-TB | lineage2.2.1 | None | SRR1173185 | HR-TB | lineage4.9 | None | SRR1144744 | HR-TB | lineage2.2.1 | None | SRR1144759 | MDR-TB | lineage2.2 | None | SRR1144809 | HR-TB | lineage2.2.1 | None | SRR1173311 | Pre-XDR-TB | lineage2.2.1 | None | SRR1173281 | RR-TB | lineage3 | None | SRR1173385 | Sensitive | lineage4.9 | None | SRR1173421 | RR-TB | lineage4.9 | None | SRR1173720 | Other | lineage4.9 | None | SRR1173450 | RR-TB | lineage4.9 | None | SRR1173515 | HR-TB | lineage4.9 | None | SRR1173740 | Other | None | SRR1173833 | Other | lineage4.9 | None | SRR1173749 | Sensitive | lineage1.1.2 | None | SRR11972182 | MDR-TB | lineage2.2.1 | None | SRR1175473 | Other | lineage4.9 | None | SRR1175474 | HR-TB | lineage4.9 | None | SRR1175491 | MDR-TB | lineage4 | None | SRR1175472 | MDR-TB | lineage4 | None | SRR1180440 | Other | lineage4.9 | None | SRR1180446 | Other | lineage4.9 | None | SRR1183034 | Sensitive | lineage4.9 | None | SRR1184308 | Sensitive | lineage4.9 | None | SRR1184329 | MDR-TB | lineage4.9 | None | SRR1196478 | MDR-TB | lineage4.9 | None | SRR1196545 | HR-TB | lineage4.9 | None | SRR13423546 | Other | lineage4.4.2 | None | SRR11972417 | MDR-TB | lineage2.2.1 | None | SRR11972425 | Pre-XDR-TB | lineage2.2.1 | None | SRR11972439 | MDR-TB | lineage1.1.3 | None | SRR11972369 | Pre-XDR-TB | lineage2.2.1 | None | SRR11972432 | MDR-TB | lineage2.2.1 | None | SRR12634609 | MDR-TB | lineage3.1.1 | None | SRR13888750 | Other | La2 | None | SRR15508556 | Other | lineage4.3.4.1 | None | SRR15315797 | RR-TB | lineage2.2.1 | None | SRR14801325 | Pre-XDR-TB | lineage4.2.1 | None | SRR14801652 | MDR-TB | lineage4.3.3 | None | SRR14801720 | RR-TB | lineage4.8 | None | SRR15276982 | Pre-XDR-TB | lineage3 | None | SRR15316595 | RR-TB | lineage4.4.2 | None | SRR16089407 | Other | lineage4.8 | None | SRR15600379 | MDR-TB | lineage2.2.1.1 | None | SRR16149133 | MDR-TB | lineage4.2.2.1 | None | SRR16149117 | MDR-TB | lineage4.2.2.1 | None | SRR16156188 | HR-TB | lineage4.9 | None | SRR16156804 | RR-TB | lineage4.9 | None | SRR16157123 | Other | lineage4.9 | None | SRR1710107 | Sensitive | lineage2.2.1 | cn | SRR1792012 | Other | La1.8.1 | None | SRR1792011 | Other | La1.8.1 | None | SRR16100713 | Sensitive | lineage4.1.2.1 | None | SRR1792024 | Other | La1.8.1 | None | SRR1792022 | Other | La1.8.1 | None | SRR18002872 | Pre-XDR-TB | lineage2.2.1 | None | SRR1792025 | Other | La1.8.1 | None | SRR18002888 | RR-TB | lineage2.2.1 | None | SRR18002881 | Pre-XDR-TB | lineage2.2.1 | None | SRR18002933 | Other | lineage2.2.1 | None | SRR18002903 | Pre-XDR-TB | lineage2.2.1 | None | SRR18002967 | Pre-XDR-TB | lineage2.2.1 | None | SRR18002941 | RR-TB | lineage2.2.1 | None | SRR18002947 | MDR-TB | lineage2.2.1 | None | SRR18002954 | Other | lineage2.2.1 | None | SRR18002961 | Other | lineage2.2.1 | None | SRR18002976 | Other | lineage2.2.1 | None | SRR18002991 | Pre-XDR-TB | lineage2.2.1 | None | SRR18002986 | MDR-TB | lineage2.2.1 | None | SRR18003023 | Other | lineage2.2.1 | None | SRR18003042 | Other | lineage2.2.1 | None | SRR18213721 | Other | lineage4.8 | None | SRR18213726 | Other | lineage3 | None | SRR18213736 | MDR-TB | lineage3 | None | SRR21469200 | Other | La1.7.1 | None | SRR18572455 | Sensitive | lineage4.9 | None | SRR18909918 | Other | lineage2.2.1.1 | None | SRR18911231 | Sensitive | lineage4.1.1.3 | None | SRR18911555 | Other | lineage4.1.2.1 | None | SRR19303773 | Other | lineage4.6.2.2 | None | SRR19324994 | Sensitive | lineage4.1.2.1 | None | SRR20969542 | Other | lineage4.4.2 | None | SRR2100067 | Other | lineage4.3.3 | None | SRR2100877 | HR-TB | lineage4.1.2 | None | SRR21469201 | Other | La1.7.1 | None | SRR19304029 | Other | lineage4.8 | None | SRR19304057 | Sensitive | lineage4.4.1.2 | None | SRR19304094 | Other | lineage6 | None | SRR19325518 | MDR-TB | lineage2.2.1 | None | SRR21469202 | Other | La1.7.1 | None | SRR22048536 | Other | lineage4.3.3 | None | SRR21595935 | Other | lineage2.2.1 | None | SRR21686597 | Sensitive | lineage4.1.2.1 | None | SRR21722120 | Sensitive | lineage4.1.2.1 | None | SRR22424743 | Pre-XDR-TB | lineage1.1.2 | None | SRR22424765 | MDR-TB | lineage4 | None | SAMEA3501065 | RR-TB | lineage4.8 | None | SRR6207283 | Sensitive | lineage4.3.3 | None | SRR22424851 | MDR-TB | lineage4.3.3 | None | ERR4815130 | Other | lineage4.8 | None | ERR4815121 | HR-TB | lineage4.6.2.2 | None | ERR4814312 | Other | lineage4 | None | ERR4815613 | Other | lineage3 | None | ERR4815268 | Other | lineage4.8 | None | ERR4815301 | Other | lineage4.4.2 | None | ERR4814300 | HR-TB | lineage4.4.1.1 | None | ERR4815341 | Other | lineage3.1.2.1 | gb | ERR4814356 | Pre-XDR-TB | lineage3.1.2 | None | ERR4814355 | Other | La1.6 | gb | ERR4815777 | Other | lineage4.9 | None | ERR4814341 | Other | lineage4.7 | None | ERR4815359 | Sensitive | lineage4.1.2.1 | None | ERR4814524 | Other | lineage4.1.1 | gb | ERR181719 | Sensitive | lineage4.3.4.2.1 | mw | SRR3675496 | Other | lineage4.1.1.3 | gb | SRR3601585 | Pre-XDR-TB | lineage2.2 | None | SRR3619841 | Pre-XDR-TB | lineage2.2.1 | None | SAMN02360583 | HR-TB | lineage2.2.2 | None | SRR3619764 | Pre-XDR-TB | lineage2.2 | None | ERR4814623 | Other | lineage4.8 | None | SRR3618864 | Pre-XDR-TB | lineage2.2.1 | None | ERR4814699 | HR-TB | lineage4.1.2.1 | gb | SRR3105797 | Pre-XDR-TB | lineage2.2.1 | None | ERR4815394 | RR-TB | lineage4.2.1 | None | ERR1750873 | Sensitive | lineage4.8 | bw | ERR171135 | Other | lineage2.2.1 | za | ERR4812763 | Other | lineage2.2.1 | None | SRR3675230 | RR-TB | lineage3 | None | ERR1750882 | Sensitive | lineage4.1.1.3 | zw | ERR1750888 | Sensitive | lineage4.8 | zw | ERR1750889 | Other | lineage4.4.1.1 | None | ERR1750885 | Sensitive | lineage2.2.1 | zw | ERR1750905 | Sensitive | lineage4.3.3 | za | ERR1750899 | Sensitive | lineage4.1.1.3 | zw | ERR4814748 | Other | lineage4.8 | None | ERR4819579 | HR-TB | lineage4.3.3 | None | ERR1750906 | Sensitive | lineage4.3.3 | za | ERR1750907 | RR-TB | None | ERR1750917 | Sensitive | lineage2.2.1 | za | ERR1750929 | Sensitive | lineage4.1.1.3 | za | ERR4814763 | Other | lineage2.2.1 | None | ERR4814714 | Other | lineage3 | None | ERR1750931 | Sensitive | lineage4.1.2.1 | za | ERR4815502 | Other | lineage4.1 | None | ERR1750944 | Other | lineage4.1.2 | za | ERR4815517 | Other | lineage1.2.2.2 | None | ERR4814831 | Sensitive | lineage2.2.1 | gb | ERR4814846 | Sensitive | lineage4.6.2.2 | gb | ERR4814896 | Other | lineage2.2.1.1 | None | SRR2024953 | MDR-TB | lineage2.2.1 | cn | ERR176580 | Sensitive | lineage4.3.4.2.1 | None | SRR5818419 | Sensitive | None | ERR4814911 | Other | lineage4.3.3 | None | ERR4814986 | Other | lineage4.3.4.2 | None | SAMEA3501073 | RR-TB | lineage4.8 | None | ERR192070 | Other | None | ERR4816928 | HR-TB | lineage1.2.2.2 | None | ERR2229541 | Other | lineage4.8 | None | ERR4815898 | Other | lineage3 | None | ERR2228965 | Other | lineage4.8 | None | ERR4815910 | Other | lineage4.1.2.1 | None | ERR4816967 | RR-TB | lineage5 | None | SAMEA3501015 | Other | lineage4.8 | None | ERR4815908 | HR-TB | lineage3 | gb | ERR4815923 | Sensitive | lineage4.8 | None | ERR4815944 | HR-TB | lineage4.1.2.1 | None | ERR4816232 | Other | lineage4 | None | ERR4817464 | Other | lineage3.1.1 | None | ERR2229024 | Sensitive | lineage4 | None | ERR2229557 | HR-TB | lineage4.8 | None | ERR2027209 | MDR-TB | lineage1.2.1.1 | None | SRR3675538 | Other | lineage4.8 | None | ERR2027253 | Other | lineage6.2.3 | None | ERR2229733 | Other | lineage4.8 | dk | ERR4816103 | Sensitive | lineage3 | gb | ERR2027257 | Other | lineage4.1.2.1 | None | ERR4816133 | Other | La1.8.2 | None | SAMN02360581 | HR-TB | lineage2.2.1 | None | ERR2027277 | Other | lineage4.8 | None | SAMN02360556 | Pre-XDR-TB | lineage2.2.2 | None | ERR2027290 | RR-TB | lineage3.1 | None | ERR2027304 | Sensitive | lineage4.1.2.1 | None | ERR4817047 | Other | lineage4.2.2.1 | gb | ERR2229147 | Other | lineage4.8 | None | ERR4817060 | RR-TB | None | ERR4816300 | Other | lineage4.1.2.1 | None | ERR4816310 | HR-TB | lineage4.6.1.2 | None | ERR2229148 | Other | lineage4.8 | dk | ERR4816422 | Other | lineage4.1.1 | gb | ERR212114 | Other | lineage4.3.4.2.1 | None | ERR4816476 | Other | lineage3.1.2.1 | None | SRR3675587 | Sensitive | lineage3 | None | ERR4817134 | HR-TB | lineage2.2.1 | None | ERR2229198 | MDR-TB | lineage4.8 | None | ERR216928 | Other | lineage4.9.1 | None | ERR4817392 | Other | lineage4.1.2.1 | gb | ERR4816510 | Other | lineage4.1.2.1 | None | ERR2229811 | Other | lineage4.8 | dk | ERR4816548 | MDR-TB | lineage4.5 | None | ERR2229234 | RR-TB | lineage4.8 | None | ERR4816549 | Other | lineage2.2.1 | None | ERR4817800 | Other | lineage3 | gb | SAMN02360571 | HR-TB | lineage2.2.2;lineage2.2.1 | None | ERR2229665 | Sensitive | lineage4.8 | dk | ERR4816665 | HR-TB | lineage4.4.1.1 | gb | SAMN02360590 | MDR-TB | lineage2.2.2 | None | ERR4817204 | RR-TB | lineage4.9 | None | ERR4816699 | Other | lineage4.6 | None | ERR4816755 | Other | lineage4.1.1.3 | None | ERR4816831 | Other | lineage4.1.2.1 | None | SRR5818426 | Other | None | ERR2228813 | Other | lineage4.8 | None | ERR2228838 | RR-TB | lineage4.8 | None | SRR4033490 | Other | lineage2.2.2 | za | SAMN02380990 | MDR-TB | lineage4.6.1.2 | None | SRR4033523 | Other | lineage2.2 | None | ERR4815811 | HR-TB | lineage4.2.1.1 | None | SRR4033549 | HR-TB | lineage2.2.2 | None | ERR2228910 | Other | lineage4.8 | None | ERR4818646 | Sensitive | lineage4.1.2.1 | None | SAMN02360595 | Pre-XDR-TB | lineage2.2.2 | None | ERR4818691 | Other | lineage4.8 | None | SRR3742667 | Sensitive | lineage4.9 | None | ERR4817398 | Other | lineage3.1.1 | None | SAMN02360586 | HR-TB | lineage2.2.1 | None | ERR4817175 | Other | lineage4.8 | None | ERR4816631 | Other | lineage2.2.1 | None | ERR2229349 | Sensitive | lineage4.8 | dk | ERR2229366 | Other | lineage4.8 | None | ERR4816702 | RR-TB | lineage4.6.2.2 | None | ERR4816745 | Pre-XDR-TB | lineage2.2.1 | None | ERR2229436 | Other | lineage4.8 | None | SRR5818386 | Other | None | ERR4816770 | Other | lineage3 | gb | ERR2229801 | Other | lineage4 | None | ERR4816856 | Other | lineage4.1.2.1 | None | ERR2228810 | RR-TB | lineage4 | None | ERR2228815 | RR-TB | lineage4.8 | None | ERR2228890 | Other | lineage4 | None | ERR2228899 | RR-TB | lineage4.8 | None | ERR4815816 | Other | lineage4.5 | gb | ERR2228900 | RR-TB | lineage4.8 | None | ERR2229523 | Sensitive | lineage4.8 | None | SAMN02360570 | Pre-XDR-TB | lineage2.2.1 | None | ERR4818988 | Other | lineage1 | None | ERR2513392 | Other | lineage4.3.2.1 | gb | ERR4816425 | Other | lineage2.2.2 | None | ERR2513382 | RR-TB | lineage4.1.1.3 | None | ERR4817828 | Other | lineage4.2.2.2 | gb | ERR4817874 | Other | lineage3 | None | ERR4819002 | HR-TB | lineage4.8 | None | SAMN02360574 | HR-TB | lineage2.2.1 | None | ERR2513056 | HR-TB | lineage4.1.2.1 | gb | ERR2513152 | Sensitive | lineage1.1.2 | gb | ERR2510745 | Sensitive | lineage4.1.2 | it | ERR4818050 | Other | lineage4.6.2.2 | None | ERR4818064 | Other | lineage4.8 | None | SAMEA3450033 | Other | lineage4.8 | None | SAMN02398710 | MDR-TB | lineage2.2.2 | None | ERR4817977 | Other | lineage4.8 | gb | ERR2513082 | Other | lineage4.1.2.1 | gb | ERR4819011 | Other | lineage3.1.2.1 | None | SAMN02360591 | Pre-XDR-TB | lineage2.2.2 | None | ERR2512423 | Other | lineage4.1.1.3 | None | ERR4818104 | Other | lineage4.1.2 | gb | ERR4818214 | Sensitive | lineage4.1.2.1 | gb | ERR2515055 | Other | lineage3 | None | ERR4818126 | RR-TB | lineage1 | None | SAMN02360580 | HR-TB | lineage2.2.1 | None | ERR4818176 | Other | lineage4.1.2.1 | None | ERR2432997 | Other | lineage4.8 | None | ERR4818190 | Other | lineage4.8 | None | ERR4818224 | Sensitive | lineage4.4.1.1 | None | ERR4819078 | Other | lineage4.3.3 | None | ERR4818234 | Sensitive | lineage4.9 | None | ERR4818851 | RR-TB | lineage4.4.1.1 | None | ERR4819041 | Sensitive | lineage4.3.3 | gb | ERR4818259 | RR-TB | lineage4.1.1 | None | ERR4818930 | Other | lineage4.1.2.1 | None | SAMEA3501063 | RR-TB | lineage4.8 | None | ERR4818393 | RR-TB | lineage3 | None | ERR4818265 | Other | lineage4.1.2.1 | None | ERR4818874 | Other | lineage4.1.2.1 | gb | ERR2512606 | MDR-TB | lineage3 | None | ERR3276170 | Other | lineage4.1.2.1 | nl | ERR4818440 | Other | lineage6.3.1 | None | SAMN02360563 | Pre-XDR-TB | lineage2.2.2 | None | ERR4818507 | RR-TB | lineage4.1.2.1 | None | ERR4818538 | Other | lineage3 | gb | SRR5007161 | RR-TB | lineage4.1.1.3.1 | None | ERR4819046 | Other | lineage2.2.1 | None | SRR5007168 | RR-TB | lineage4.9 | None | SRR5007167 | RR-TB | lineage4.1.1.3.1 | None | ERR4817584 | MDR-TB | lineage3 | None | ERR2513508 | Sensitive | lineage3 | gb | ERR4817623 | Sensitive | lineage4.6.2.2 | gb | SRR5074294 | Sensitive | lineage4.4.1.1 | None | ERR4819191 | Other | lineage4.6.2.2 | None | ERR4820256 | Other | lineage2.2.1 | None | ERR4819265 | HR-TB | lineage4.3.4.1 | None | ERR4818522 | Pre-XDR-TB | lineage3 | None | SAMN02360577 | HR-TB | lineage3 | None | ERR4817533 | Sensitive | lineage4.1.2.1 | None | SRR5007193 | RR-TB | lineage4.1.1.3.1 | None | ERR4817563 | Other | lineage4.1.2.1 | gb | ERR4817619 | Other | lineage4.1.2.1 | gb | ERR2446154 | Sensitive | lineage4.4.1.1 | nl | ERR4818977 | RR-TB | lineage4.1.2.1 | None | ERR4819096 | Other | lineage4.4.1.1 | None | SRR5074711 | Sensitive | lineage4.3.3 | None | SRR5074710 | Sensitive | lineage4.3.3 | None | SAMEA3501067 | RR-TB | lineage4.8 | None | ERR4819166 | Other | lineage3 | gb | ERR4820266 | RR-TB | lineage3 | None | ERR2513830 | RR-TB | lineage4.8 | None | ERR4819313 | Other | lineage3.1.1 | None | ERR4819324 | Other | lineage4.8 | gb | ERR4820324 | Other | lineage4 | None | ERR4819329 | Sensitive | lineage4.6.2.2 | None | ERR3275615 | Sensitive | lineage4.4.1.1 | nl | ERR3275239 | Sensitive | lineage4.8 | nl | ERR4819518 | Other | lineage4.1.1 | None | ERR4819423 | Other | lineage4.6.2.2 | None | SAMN02360564 | Pre-XDR-TB | lineage2.2.1 | None | ERR4819414 | Other | lineage1.1.3.1 | gb | ERR4819528 | RR-TB | lineage3 | None | ERR4820397 | Other | lineage4.9 | None | ERR4819550 | Other | lineage3 | None | ERR4819596 | Sensitive | lineage4.9 | gb | ERR4819568 | Sensitive | lineage4.9 | None | ERR2514351 | Sensitive | lineage3 | gb | ERR4820410 | Pre-XDR-TB | lineage3.1.1 | None | ERR2514514 | RR-TB | lineage3 | gb | ERR2514393 | Other | lineage4.1.1.3.1 | gb | ERR4819640 | RR-TB | lineage4.6.2.2 | None | ERR4820777 | Other | lineage4.1.2.1 | None | ERR4819706 | MDR-TB | lineage4.3.4.2 | None | ERR4819636 | Other | lineage3.1.2 | None | ERR2514430 | Other | lineage4.1.1.3.1;lineage3.1.2 | None | ERR4819766 | Other | lineage4.4.1.1 | None | ERR4820484 | Other | lineage4.8 | None | ERR4819765 | Other | lineage4.1 | None | ERR2514565 | Other | lineage3.1.2.1 | gb | ERR4819784 | Other | lineage4.1.2.1 | None | ERR4819772 | RR-TB | lineage1.1.3.1 | None | ERR2514645 | Other | lineage4.3.4.1 | None | ERR2514801 | Other | lineage1.1.3.2 | gb | ERR4819872 | HR-TB | lineage4.4.1.1 | None | ERR2513819 | Pre-XDR-TB | lineage4.3.3 | gb | ERR4819910 | Other | lineage4.9 | None | ERR4820558 | Other | lineage4.8 | gb | ERR1023509 | Other | None | ERR2514834 | Other | lineage4.7 | None | ERR4819932 | Other | lineage4.7 | None | ERR4820019 | Other | lineage4.3.4.2.1 | None | ERR4820151 | RR-TB | lineage4.8 | None | ERR4820161 | Other | lineage3 | None | ERR4820188 | Other | lineage3 | gb | ERR4821775 | Other | lineage4 | None | ERR4821011 | Other | lineage6 | None | ERR4821811 | RR-TB | lineage4.9 | None | ERR4821812 | Other | lineage4.8 | gb | SRR6045422 | Other | lineage4.3.1.1 | None | SRR6045447 | Other | lineage3 | gb | SAMEA3501046 | RR-TB | lineage4.8 | None | ERR4821119 | Other | lineage4.4.1.1 | None | SAMEA3501070 | RR-TB | lineage4.8 | None | ERR4819948 | Other | lineage4.4.1.1 | None | ERR4820829 | Other | lineage4.8 | None | ERR4820107 | RR-TB | None | ERR4820922 | Other | lineage4.1.2.1 | gb | ERR4820959 | Other | lineage4.1.2.1 | None | ERR4820968 | Other | lineage4.1.2.1 | gb | ERR4821007 | RR-TB | lineage1.2.2.2 | None | SAMEA3501052 | RR-TB | lineage4.8 | None | SRR6045420 | Other | lineage4.1.2.1 | gb | SRR6046089 | Other | lineage4.1.2.1 | None | ERR4821078 | Other | lineage4.1.2.1 | gb | SAMN02360579 | HR-TB | lineage2.2.1.1 | None | ERR4821143 | RR-TB | lineage4.9 | None |
|---|
