lineage | Count |
---|---|
lineage1.1.2;lineage6.2.3 | 1 |
lineage3 | 3 |
lineage2.2.1 | 8 |
lineage4.2.1 | 2 |
lineage4.6.1.1 | 2 |
lineage4.3.3 | 2 |
lineage4.9;lineage7 | 3 |
La1.6;La3;lineage4.6.4;lineage4.9 | 1 |
lineage4.9 | 6 |
lineage4 | 1 |
La1.7.1 | 1 |
lineage4.6.3;lineage4.9 | 1 |
lineage4.7 | 1 |
lineage4.8.1 | 1 |
lineage2.1;lineage4.9 | 1 |
lineage4.1.1.1 | 1 |
lineage4.2.2.2 | 2 |
lineage4.4.1.1.1 | 1 |
lineage4.1.1.3.1 | 1 |
1 | |
lineage2.1;lineage4.9;lineage7 | 1 |
lineage3.1;lineage9 | 1 |
lineage4.3 | 1 |
La1.2;La1.8.1 | 1 |
lineage4.3.3;lineage4.8 | 1 |
lineage4.8.2;lineage4.9 | 1 |
spoligotype | Count |
---|---|
None | 46 |
ID | Drug resistance | Lineage | Country iso2 | ERR3324368 | RR-TB | lineage1.1.2;lineage6.2.3 | None | ERR5979454 | Pre-XDR-TB | lineage3 | None | SRR6046382 | Sensitive | lineage2.2.1 | None | ERR10762275 | MDR-TB | lineage4.2.1 | None | ERR1199132 | Sensitive | lineage4.6.1.1 | None | ERR4816610 | Other | lineage4.3.3 | None | SRR3619764 | Pre-XDR-TB | lineage2.2.1 | None | SRR3675231 | MDR-TB | lineage4.9;lineage7 | None | ERR2693231 | Other | La1.6;La3;lineage4.6.4;lineage4.9 | None | SRR3675582 | Other | lineage4.9 | None | SRR7496471 | Sensitive | lineage4 | None | SRR3675456 | RR-TB | lineage4.9;lineage7 | None | SRR21469202 | Other | La1.7.1 | None | ERR4815556 | RR-TB | lineage3 | None | ERR11252558 | Other | lineage4.6.3;lineage4.9 | None | SRR3675539 | HR-TB | lineage4.9;lineage7 | None | SRR7496523 | Other | lineage4.7 | None | SRR11342693 | MDR-TB | lineage4.8.1 | None | SRR29055611 | Sensitive | lineage4.9 | None | ERR387051 | Other | lineage4.9 | None | SRR11342649 | MDR-TB | lineage4.3.3 | None | SRR6045191 | Sensitive | lineage4.9 | None | SRR22175249 | Pre-XDR-TB | lineage2.2.1 | None | SRR3675495 | Other | lineage2.1;lineage4.9 | None | SRR11342642 | MDR-TB | lineage4.1.1.1 | None | SRR5818586 | RR-TB | lineage4.2.2.2 | None | ERR867541 | MDR-TB | lineage4.2.1 | None | SRR11342644 | MDR-TB | lineage4.4.1.1.1 | None | SRR7070157 | Other | lineage4.1.1.3.1 | None | ERR4817069 | RR-TB | None | ERR4821747 | Sensitive | lineage4.9 | None | SRR3675555 | HR-TB | lineage2.1;lineage4.9;lineage7 | None | SRR6044952 | Other | lineage4.9 | None | SRR25827418 | XDR-TB | lineage3.1;lineage9 | None | SRR11972425 | Pre-XDR-TB | lineage2.2.1 | None | SRR11342687 | RR-TB | lineage4.2.2.2 | None | ERR4872322 | Pre-XDR-TB | lineage2.2.1 | None | ERR987765 | Sensitive | lineage4.6.1.1 | None | ERR3275941 | RR-TB | lineage4.3 | nl | SRR10869071 | MDR-TB | lineage2.2.1 | None | SRR3601585 | Pre-XDR-TB | lineage2.2.1 | None | ERR867567 | RR-TB | lineage3 | None | SRR7240033 | Other | La1.2;La1.8.1 | None | SRR1062920 | MDR-TB | lineage4.3.3;lineage4.8 | None | SRR5007168 | Other | lineage4.8.2;lineage4.9 | None | SRR3619841 | Pre-XDR-TB | lineage2.2.1 | None |
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