EBG00000313339 - n.2453G>C


Drug resistance types
53 Sensitive 18 RR-TB 96 HR-TB 28 MDR-TB 20 Pre-XDR-TB 3 XDR-TB 142 Other
lineage Counts
lineage Count
lineage4.9;lineage7 1
lineage4.9 166
lineage4.8 20
lineage4.1.2.1 5
La1.7;lineage4.9;lineage7 3
lineage4.2.1 1
lineage2.2.1 25
La3;lineage4.9 8
La1;lineage4.9 2
La1.7.1;La1.7.X-unk4;lineage7 1
lineage1.1.2;lineage6.2.3 1
La3;lineage2.1;lineage4.9;lineage6.3 1
lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 1
lineage4.3.3 5
La1.7.1 3
lineage4.8;lineage4.9 2
La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 1
3
M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 1
lineage3.1;lineage9 1
La1.2.BCG 3
lineage3 4
lineage3.1.3 1
lineage4.1.2 1
La3;M.canetti;lineage4.9 1
lineage2.2.1.2 1
lineage4.3.4.2.1 3
lineage2.2;lineage4.9 1
La1;lineage2;lineage4.9 1
lineage6.1.3 1
lineage2.2.1;lineage3 1
lineage5.2 2
La1.6;La3;lineage4.9 1
lineage4.1.1.3 3
La1.8.1 7
La1.7.1;La1.7.X-unk4 1
lineage4.5 1
lineage4.6.1.1 2
lineage4.3.2.1 1
lineage4.4.1.1 1
lineage4.9;lineage6.3 1
La1.7;lineage4.9 8
lineage2.2.1.1 2
La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 4
lineage2.2;lineage4 1
La1.7.1;lineage4.9 1
lineage6 1
M.canetti;lineage4.9 2
lineage2.1 2
lineage4.3.4.1 5
lineage2.1;lineage4.9;lineage6.3 1
La1.7 1
La3;lineage2.1;lineage4.9 1
La3;lineage2.2.1 1
La1.7;lineage3;lineage4.9;lineage7 1
lineage2.2.1;lineage4.9 1
lineage1.1.3.1 1
La1.7;lineage4.9;lineage6 1
La1.7;M.canetti;lineage4.9 1
lineage4.3.3;lineage4.8 3
lineage2.2 1
La1.6;La3;lineage4.6.4;lineage4.9 1
lineage2.1;lineage4.9 1
lineage1.1.2 3
La1.2;La1.8.1 1
La1.7;lineage3.1;lineage4 1
La2 1
lineage4.6.3;lineage4.9 1
lineage4 1
La1.3 1
lineage4.2;lineage4.6.3;lineage4.9 1
lineage3.1.1 1
La1;lineage4.1.2 1
lineage2.2.1;lineage4.1.2.1 1
lineage4.4.1.2 1
lineage3;lineage4.9 1
lineage4.1.1.3;lineage4.9 1
La3;lineage4 1
lineage4.6.2.2 1
lineage4.2.1.1;lineage4.3.3 1
lineage4.3.4 1
La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9 1
lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 1
lineage2.2.1;lineage4 1
lineage2.2.1;lineage3;lineage4 1
lineage4.3.4.2 1
La1.6;La3;M.canetti;lineage4.6.4;lineage4.9 1
La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 1
lineage4.1.1.2 1
lineage1;lineage4.9 1
La1.6;La3;M.canetti;lineage2.1;lineage4.9 1
spoligotype Counts
spoligotype Count
None 360
Geographic prevalence
Country level data for this variant is available for 3 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR3445502 HR-TB lineage4.9;lineage7 None
ERR176779 HR-TB lineage4.9 None
ERR4814976 Other lineage4.9 None
ERR4829530 Pre-XDR-TB lineage4.8 None
ERR978751 Other lineage4.8 None
SAMEA3501063 RR-TB lineage4.8 None
SRR5818448 Other lineage4.9 None
ERR108471 HR-TB lineage4.9 None
SRR9613550 HR-TB lineage4.1.2.1 None
SRR5341432 Other La1.7;lineage4.9;lineage7 None
SRR14802079 MDR-TB lineage4.2.1 None
SRR10809074 HR-TB lineage4.9 None
SRR3618864 Pre-XDR-TB lineage2.2.1 None
ERR3797064 Other La3;lineage4.9 None
ERR2851356 Sensitive lineage4.9 None
ERR133825 HR-TB La1;lineage4.9 None
ERR363509 Sensitive lineage4.9 None
SRR6044876 Sensitive lineage4.9 None
SRR3675246 Other lineage4.9 None
ERR3445501 HR-TB La1.7.1;La1.7.X-unk4;lineage7 None
ERR978752 Other lineage4.8 None
ERR3324368 RR-TB lineage1.1.2;lineage6.2.3 None
SRR3619841 Pre-XDR-TB lineage2.2.1 None
SRR5341455 Sensitive lineage4.9 None
ERR11081258 Other lineage4.8 None
SRR5341467 Other lineage4.9 None
SRR1173777 Sensitive lineage4.9 None
SRR5341425 Other lineage4.9 None
SRR11972367 Sensitive lineage2.2.1 None
SRR3675517 Other La3;lineage2.1;lineage4.9;lineage6.3 None
ERR6358991 HR-TB lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 None
ERR9992879 XDR-TB lineage4.3.3 None
ERR502510 HR-TB lineage4.9 None
SRR1196478 Other lineage4.9 None
ERR3283018 HR-TB lineage4.9 None
ERR736834 HR-TB lineage4.9 None
SRR21469202 Other La1.7.1 None
ERR6866022 HR-TB lineage4.8;lineage4.9 None
SRR5341299 HR-TB lineage4.9 None
ERR4818110 Sensitive lineage4.9 None
ERR736863 MDR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR926155 Other lineage4.9 None
SRR5341469 HR-TB lineage4.9 None
SAMEA3501052 RR-TB lineage4.8 None
ERR369159 Other lineage4.9 None
ERR363446 Other lineage4.9 None
ERR1063896 HR-TB None
ERR234659 HR-TB None
ERR11252599 Other M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 None
SRR25827682 Other None
SRR25827418 XDR-TB lineage3.1;lineage9 None
ERR349300 Other lineage4.9 None
ERR3797029 Other lineage4.9 None
SRR1173568 Sensitive lineage4.9 None
ERR4819051 Sensitive lineage4.9 None
ERR363449 Other lineage4.9 None
ERR736872 HR-TB lineage4.9 None
ERR4798262 HR-TB La1.2.BCG None
ERR779852 HR-TB lineage4.9 None
ERR3797087 Sensitive lineage4.9 None
ERR4800341 HR-TB lineage3 None
ERR978746_ERR978747_ERR978748 RR-TB lineage4.8 None
ERR2513121 Sensitive lineage3.1.3 None
ERR4024991 HR-TB lineage4.8;lineage4.9 None
ERR4798099 HR-TB lineage4.9 None
ERR363499 Other lineage4.9 None
ERR369151 Other lineage4.9 None
ERR4769419 Sensitive lineage4.9 None
SRR3619764 Pre-XDR-TB lineage2.2.1 None
ERR400320 Sensitive lineage4.9 None
SRR20970043 MDR-TB lineage2.2.1 None
SRR1159378 Other lineage4.9 None
ERR349296 Sensitive lineage4.9 None
ERR5162090 RR-TB lineage4.9 None
SRR11972425 Pre-XDR-TB lineage2.2.1 None
SRR1792478 HR-TB La1.7.1 None
SRR9970980 HR-TB lineage4.1.2 None
ERR473277 HR-TB La3;M.canetti;lineage4.9 None
ERR926165 Other lineage4.9 None
ERR4799989 Pre-XDR-TB lineage2.2.1.2 None
ERR3797015 HR-TB lineage4.9 None
SRR5341341 Pre-XDR-TB lineage2.2.1 None
ERR4831617 MDR-TB lineage2.2.1 None
ERR926154 Sensitive lineage4.9 None
ERR245794 HR-TB lineage4.3.4.2.1 None
ERR736848 Other lineage4.9 None
ERR926157 Other lineage4.9 None
ERR369163 Other lineage4.9 None
SRR3601585 Pre-XDR-TB lineage2.2.1 None
ERR4815550 Other lineage2.2;lineage4.9 None
ERR067699 HR-TB La1;lineage2;lineage4.9 None
ERR9787256 Other lineage6.1.3 None
ERR978762 Other lineage4.8 None
SRR25827497 XDR-TB lineage2.2.1;lineage3 None
ERR9119483 Pre-XDR-TB lineage5.2 None
ERR3283030 HR-TB lineage4.9 None
ERR978755_ERR978756_ERR978754_ERR978757 RR-TB lineage4.8 None
SRR16156817 Other lineage4.9 None
SRR1183965 Sensitive lineage4.9 None
ERR2229198 Sensitive lineage4.8 None
ERR2693254 Other La1.6;La3;lineage4.9 None
ERR970449 RR-TB lineage4.1.1.3 None
SRR14801749 HR-TB lineage4.9 None
SRR7236177 Other La1.8.1 None
ERR124636 HR-TB lineage4.9 None
ERR4799478 Pre-XDR-TB lineage2.2.1 None
ERR5917985 MDR-TB lineage2.2.1 None
ERR3445503 Other La1.7.1;La1.7.X-unk4 None
ERR4811031 Other lineage4.5 None
ERR987765 Sensitive lineage4.6.1.1 None
ERR4811030 Other lineage4.9 None
SRR5341461 HR-TB lineage4.9 None
SRR9970981 RR-TB lineage4.3.2.1 None
ERR400326 Other lineage4.9 None
SRR6789624 HR-TB lineage4.1.1.3 None
SRR11972417 MDR-TB lineage2.2.1 None
SRR8692893 Other lineage4.9 None
ERR5917972 MDR-TB lineage4.4.1.1 za
ERR1035122 HR-TB lineage4.9 None
ERR212121 HR-TB lineage4.9;lineage6.3 None
ERR926163 Other lineage4.9 None
ERR751326 Other lineage4.9 None
SRR3675235 HR-TB lineage4.9 None
ERR1023525 HR-TB La1.7;lineage4.9 None
ERR405209 Sensitive La1.7;lineage4.9 None
SRR10808490 Sensitive lineage2.2.1.1 None
ERR926159 Sensitive lineage4.9 None
ERR2693230 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
ERR323107 HR-TB lineage4.9 None
ERR4796254 Other lineage4.9 None
ERR1063858 HR-TB lineage4.9 None
SRR8692863 Other lineage2.2;lineage4 None
ERR12015084 Other lineage4.8 None
ERR1063859 HR-TB La1.7.1;lineage4.9 None
ERR9787362 Sensitive lineage6 None
SRR10808399 Sensitive lineage4.9 None
SRR3675541 Sensitive lineage4.9 None
ERR323108 HR-TB La1.7;lineage4.9 None
SRR5341453 Other lineage4.9 None
ERR3797028 HR-TB M.canetti;lineage4.9 None
ERR4831618 MDR-TB lineage2.1 None
ERR3283014 Other La3;lineage4.9 None
SRR12416842 HR-TB lineage4.9 None
SRR15508556 Other lineage4.3.4.1 None
SRR6044875 Other lineage4.9 None
ERR926164 Other lineage4.9 None
ERR363453 Other lineage4.9 None
ERR702404 HR-TB lineage2.1;lineage4.9;lineage6.3 None
SRR5818459 Other lineage4.9 None
ERR4797184 HR-TB lineage4.9 None
SRR3675222 Other La1.7 None
SRR3675389 Other lineage4.9 None
SRR1158918 Other lineage4.9 None
SRR26159035 Sensitive lineage4.9 None
SRR10808730 Other lineage4.9 None
ERR4797054 Pre-XDR-TB lineage2.1 None
SRR5341302 Other La3;lineage2.1;lineage4.9 None
ERR978734_ERR978733_ERR978735 RR-TB lineage4.8 None
SRR6044835 Other lineage4.9 None
ERR970413 MDR-TB lineage2.2.1 None
SRR26937071 MDR-TB La3;lineage2.2.1 None
SRR1173185 Other lineage4.9 None
SRR5341315 Other La1.7;lineage3;lineage4.9;lineage7 None
ERR4815310 Other lineage2.2.1;lineage4.9 None
SAMEA3501070 RR-TB lineage4.8 None
ERR3283057 Sensitive La3;lineage4.9 None
ERR216938 HR-TB La1.7;lineage4.9 None
SRR5341412 Pre-XDR-TB lineage3 None
ERR363479 Other lineage4.9 None
SRR1792011 Other La1.8.1 None
ERR970445 MDR-TB lineage2.2.1 None
ERR926161 Sensitive lineage4.9 None
ERR736856 HR-TB lineage4.9 None
ERR971389 Other lineage4.9 None
ERR181824 MDR-TB lineage4.9 None
ERR8479578 HR-TB lineage1.1.3.1 None
SAMEA3501065 RR-TB lineage4.8 None
ERR137286 Other lineage4.9 None
ERR6866547 Other La1.7;lineage4.9;lineage6 None
ERR6358979 HR-TB lineage4.9 None
SRR5818414 Other lineage4.9 None
ERR4816852 Other lineage4.9 None
ERR4808964 RR-TB lineage2.2.1 None
ERR4797264 HR-TB lineage4.9 None
ERR736835 HR-TB La1.7;M.canetti;lineage4.9 None
SRR1140574 MDR-TB lineage4.3.3;lineage4.8 None
ERR176651 Other lineage4.9 None
ERR4769417 Pre-XDR-TB lineage4.9 None
ERR4810624 MDR-TB lineage2.2 None
ERR373945 Other lineage4.9 None
SRR5818388 Other lineage4.9 None
ERR4831616 MDR-TB lineage2.2.1 None
SRR1175472 RR-TB lineage4.3.4.1 None
ERR4769493 Other lineage4.9 None
SRR6045010 Sensitive lineage4.9 None
ERR978756 Other lineage4.8 None
ERR9786911 HR-TB lineage4.1.2.1 None
SRR5341298 Other lineage4.9 None
SRR10808668 Other lineage2.2.1 None
ERR363421 Other lineage4.9 None
ERR702405 HR-TB lineage4.9 None
ERR3797079 Sensitive lineage4.9 None
SRR6046839 Other lineage4.9 None
SRR8692807 Other lineage4.9 None
SRR26399973 Other La3;lineage4.9 None
ERR2693245 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
SRR6982239 Sensitive lineage4.1.1.3 None
SRR9971041 MDR-TB lineage4.3.3 None
SRR1791747 Other La1.8.1 None
SRR7617847 Other La1.8.1 None
ERR3797048 Other La3;lineage4.9 None
SRR3675492 Other La1.7;lineage4.9 None
ERR6866410 HR-TB lineage4.9 None
SRR7535082 Other lineage4.9 None
ERR926156 Other lineage4.9 None
ERR4816322 Other lineage4.9 None
ERR4872322 Pre-XDR-TB lineage2.2.1 None
ERR176518 Sensitive lineage4.3.4.2.1 None
ERR2693231 HR-TB La1.6;La3;lineage4.6.4;lineage4.9 None
ERR4799547 HR-TB lineage2.2.1 None
ERR978761_ERR978762_ERR978760 RR-TB lineage4.8 None
SRR5341333 HR-TB lineage2.1;lineage4.9 None
ERR181887 Other lineage4.9 None
SRR5341384 HR-TB lineage4.9 None
ERR349265 Other lineage4.9 None
ERR1063855 Other lineage4.9 None
ERR1063883 HR-TB lineage4.9 None
ERR363426 Sensitive lineage4.9 None
ERR4821655 HR-TB lineage4.9 None
SRR5341310 Other lineage1.1.2 None
SRR7240033 Other La1.2;La1.8.1 None
ERR405219 HR-TB La1.7;lineage3.1;lineage4 None
ERR3797019 Other La1.8.1 None
SRR3675548 Sensitive lineage4.9 None
ERR176778 HR-TB lineage4.9 None
SRR13888750 Other La2 None
ERR926158 Sensitive lineage4.9 None
SRR21469200 Other La1.7.1 None
SRR1175508 Sensitive lineage4.9 None
ERR926160 Other lineage4.9 None
SRR10315567 HR-TB lineage2.2.1 None
ERR3283011 Other La3;lineage4.9 None
SRR6046577 Other lineage4.6.3;lineage4.9 None
ERR867523 Pre-XDR-TB lineage2.2.1 None
SRR1175474 Other lineage4.9 None
ERR323062 HR-TB lineage4.9 None
ERR1063862 HR-TB lineage4.9 None
ERR736875 HR-TB lineage4.9 None
ERR3273109 HR-TB lineage4 None
ERR363498 Other lineage4.9 None
ERR4769495 Other La1.3 None
SRR3675488 Other La1.7;lineage4.9 None
SRR6046376 Other lineage3 None
SRR5341267 Pre-XDR-TB lineage3 None
SRR14801759 MDR-TB La1.7;lineage4.9 None
ERR4769474 HR-TB lineage4.9 None
ERR4797193 HR-TB lineage1.1.2 None
ERR4812155 Other lineage4.9 None
ERR3283042 HR-TB lineage4.9 None
ERR363445 Other lineage4.9 None
SAMEA3501067 RR-TB lineage4.8 None
ERR363502 Other lineage4.9 None
ERR5311097 Other lineage4.2;lineage4.6.3;lineage4.9 None
SRR5341293 Sensitive lineage4.9 None
SRR6045158 Other lineage4.9 None
SRR12634609 MDR-TB lineage3.1.1 None
SRR5818408 Other lineage4.9 None
SRR16156775 Other lineage4.9 None
ERR473332 Other lineage4.9 None
SRR9970978 Other La1;lineage4.1.2 None
ERR3797086 Sensitive lineage4.9 None
SRR6045519 MDR-TB M.canetti;lineage4.9 None
SRR1184329 Other lineage4.9 None
ERR3283040 HR-TB lineage4.9 None
ERR11465352 Sensitive lineage4.3.4.1 None
ERR11488822 Pre-XDR-TB lineage2.2.1;lineage4.1.2.1 None
ERR373947 Other lineage4.9 None
ERR5311094 HR-TB lineage4.9 None
ERR4872077 Pre-XDR-TB lineage5.2 None
SRR1915485 Other La1.2.BCG None
ERR323056 HR-TB lineage4.4.1.2 None
ERR212125 HR-TB lineage4.9 None
SRR1175491 MDR-TB lineage4.3.4.1 None
SRR5341396 Other lineage3;lineage4.9 None
SRR1792012 Other La1.8.1 None
ERR1034634 HR-TB lineage4.9 None
ERR4796929 Sensitive lineage4.9 None
SRR2010299 MDR-TB lineage2.2.1 None
SRR1175507 Sensitive lineage4.1.1.3;lineage4.9 None
SRR1915487 Other La1.2.BCG None
ERR349266 Other lineage4.9 None
ERR11465510 Sensitive lineage4.3.4.2.1 None
ERR4831620 MDR-TB lineage2.2.1 None
ERR3283028 Other La3;lineage4 None
ERR3283025 MDR-TB La1.7;lineage4.9 None
ERR363456 Sensitive lineage4.9 None
ERR9786597 Other lineage4.6.2.2 None
ERR245675 Sensitive lineage1.1.2 None
SRR1792022 Other La1.8.1 None
ERR1199132 Sensitive lineage4.6.1.1 None
ERR369162 Other lineage4.9 None
ERR4797474 Other lineage4.9 None
ERR11465351 Sensitive lineage4.1.2.1 None
ERR3806850 HR-TB lineage4.1.2.1 None
SRR5341373 Other lineage4.9 None
SRR9971114 Other lineage2.2.1 None
ERR867542 HR-TB lineage4.2.1.1;lineage4.3.3 None
ERR736817 HR-TB lineage4.3.4 None
ERR3797044 Other La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9 None
ERR2693252 HR-TB lineage4.9 None
SRR12416824 HR-TB lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 None
ERR502943 Sensitive lineage2.2.1;lineage4 None
SRR25827605 Pre-XDR-TB lineage2.2.1;lineage3;lineage4 None
ERR978747 Other lineage4.8 None
ERR9786592 Other lineage4.3.4.2 None
SRR16156804 Sensitive lineage4.9 None
ERR3797017 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
ERR4188247 HR-TB lineage4.9 None
ERR363474 Sensitive lineage4.9 None
SRR18909918 Other lineage2.2.1.1 None
SRR5341400 Sensitive lineage4.9 None
ERR3283031 Other La3;lineage4.9 None
ERR926162 Sensitive lineage4.9 None
ERR978757 RR-TB lineage4.8 None
SRR5341422 HR-TB La1.7;lineage4.9;lineage7 None
ERR3283024 HR-TB La1.6;La3;M.canetti;lineage4.6.4;lineage4.9 None
SRR5341300 HR-TB lineage4.9 None
SRR5341313 Other La1.7;lineage4.9;lineage7 None
SRR6046644 MDR-TB La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 None
ERR323115 Sensitive lineage4.9 None
ERR9119669 MDR-TB lineage4.9 None
ERR8975044 Other lineage4.1.1.2 None
ERR2503533 Other lineage4.1.2.1 fi
ERR978750_ERR978752_ERR978751 RR-TB lineage4.8 None
ERR373946 Other lineage4.9 None
ERR3797014 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
SRR6824501 Pre-XDR-TB lineage2.2.1 None
SRR1062920 MDR-TB lineage4.3.3;lineage4.8 None
ERR11465353 Sensitive lineage4.3.4.1 None
SRR26159043 Other lineage4.9 None
ERR323066 HR-TB lineage4.9 None
SRR11342636 MDR-TB lineage4.3.3 None
SRR11662694 Other lineage4.9 None
ERR6359066 HR-TB lineage4.9 None
SRR26159063 RR-TB lineage4.9 None
ERR4812328 Other lineage4.3.3 pe
SRR6982141 Other lineage4.3.3 None
ERR323045 HR-TB lineage1;lineage4.9 None
SRR5341308 HR-TB lineage4.9 None
ERR3797063 Other La3;lineage4.9 None
SRR1049677 MDR-TB lineage4.3.3;lineage4.8 None
ERR1063849 HR-TB lineage4.9 None
ERR1063846 HR-TB lineage4.9 None
ERR3283020 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.9 None
SRR1180996 Other lineage4.9 None
SRR6511621 HR-TB lineage4.9 None
SRR10808805 Other La1;lineage4.9 None
SRR5341323 Sensitive lineage4.9 None
SRR5341387 Other lineage4.9 None
SRR5818464 Other lineage4.9 None