EBG00000313339 - n.1092C>T
Drug resistance types
100 Sensitive
79 RR-TB
43 HR-TB
83 MDR-TB
38 Pre-XDR-TB
2 XDR-TB
330 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4 | 5 |
| lineage4.8 | 76 |
| M.canetti;lineage2.1;lineage4.9;lineage6.3 | 1 |
| lineage4.9 | 135 |
| lineage4.1.2.1 | 26 |
| lineage1.1.1 | 2 |
| lineage4.2.1 | 9 |
| lineage2.2.1 | 105 |
| lineage4.3.2.1 | 5 |
| lineage4.3.3;lineage4.8 | 1 |
| lineage4.3.4.1 | 7 |
| lineage3.1.1 | 11 |
| lineage4.3.3 | 17 |
| lineage4.4.1.1 | 13 |
| La1.6 | 1 |
| lineage4.2.1.1;lineage4.3.3 | 1 |
| lineage2.2.2 | 8 |
| lineage3 | 51 |
| lineage4.1.1.3 | 13 |
| lineage4.8.1 | 4 |
| lineage2.2.1;lineage4.8 | 1 |
| lineage4.4.2 | 5 |
| La1.7.1 | 3 |
| lineage1.2.2.2 | 8 |
| lineage2.2.1;lineage4 | 2 |
| lineage2.2.1.1 | 7 |
| La1.3 | 4 |
| lineage4.1.1.1 | 8 |
| lineage2.2.1;lineage4.9 | 4 |
| lineage4.1.2.1;lineage4.9 | 3 |
| lineage3.1.3 | 2 |
| lineage4.7 | 6 |
| lineage6.1.2 | 2 |
| lineage4.4 | 1 |
| La2 | 1 |
| lineage4.3.4.1;lineage4.9 | 2 |
| lineage1.2.1.2.1 | 1 |
| lineage1.1.2 | 3 |
| lineage4.2.2.2 | 11 |
| lineage4.1.2 | 5 |
| lineage1.1.3.1 | 2 |
| lineage4.3.4.2;lineage4.9 | 1 |
| lineage4.1.1.3.1;lineage4.9 | 1 |
| lineage4.3.1.1 | 5 |
| lineage4.3.4.2 | 4 |
| lineage4.3.4.2.1 | 5 |
| lineage3.1.2.2 | 3 |
| lineage2;lineage4.9 | 1 |
| lineage3.1.2.1 | 4 |
| lineage4.1.1.3.1 | 2 |
| lineage4.9;lineage7 | 2 |
| lineage4.3 | 2 |
| lineage2.2;lineage4.9 | 1 |
| lineage4.2.1.1 | 2 |
| lineage3;lineage4 | 2 |
| La3;lineage4.9 | 1 |
| La1.8.1 | 10 |
| lineage3.1.1;lineage4.9 | 1 |
| lineage4.5 | 2 |
| lineage4.6.5 | 1 |
| lineage4.4.1.1.1 | 5 |
| lineage4.4.1.2 | 3 |
| lineage6.1.3 | 3 |
| lineage4.2.2 | 2 |
| lineage4.6 | 1 |
| lineage3.1.1;lineage4 | 1 |
| lineage4.3.2 | 2 |
| lineage1.2.1.1 | 1 |
| lineage2.1;lineage4.9 | 1 |
| La1.2 | 2 |
| lineage2.2;lineage4 | 1 |
| La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | 1 |
| lineage4.8;lineage4.9 | 1 |
| lineage5.1.3 | 1 |
| lineage3.1.2.1;lineage4.9 | 1 |
| lineage1.2.1.2 | 2 |
| M.canetti;lineage2.1;lineage4.9 | 1 |
| lineage4.6.1.1 | 1 |
| lineage4.6.2.2 | 2 |
| M.canetti;lineage4.9 | 1 |
| lineage4.3.3;lineage4.9 | 1 |
| lineage5.1.1 | 1 |
| lineage2;lineage4 | 1 |
| lineage4.8.2 | 1 |
| lineage3.1.2 | 2 |
| lineage4.1.1.3;lineage4.9 | 1 |
| lineage4.1.2.1;lineage4.4.1.1 | 1 |
| lineage2.1;lineage4.9;lineage7 | 1 |
| La1.4 | 1 |
| La1.7;lineage4.9 | 2 |
| 2 | |
| lineage4.1;lineage4.9 | 1 |
| lineage4.1.3 | 1 |
| lineage4.1.1.2 | 1 |
| lineage1.1.2;lineage6.2.3 | 1 |
| La1;lineage4.9 | 1 |
| lineage4.1.2.1;lineage4.4.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 675 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR4798823 | HR-TB | lineage4 | None | ERR978751 | Other | lineage4.8 | None | SRR6045952 | HR-TB | M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | ERR4816322 | Other | lineage4.9 | None | SRR21240055 | Other | lineage4.1.2.1 | None | ERR4819314 | Other | lineage1.1.1 | None | ERR10762275 | MDR-TB | lineage4.2.1 | None | ERR10762495 | MDR-TB | lineage2.2.1 | None | SRR1049674 | HR-TB | lineage2.2.1 | None | SRR11349147 | RR-TB | lineage4.3.2.1 | None | SRR1049677 | MDR-TB | lineage4.3.3;lineage4.8 | None | SRR1173170 | Other | lineage4.9 | None | SRR1175472 | RR-TB | lineage4.3.4.1 | None | SRR1180250 | Other | lineage4.9 | None | ERR10796560 | Other | lineage4.9 | None | ERR978750 | RR-TB | lineage4.8 | None | ERR2446580 | Sensitive | lineage3.1.1 | nl | SRR7131098 | MDR-TB | lineage4.3.3 | None | ERR3283046 | Sensitive | lineage4.9 | None | SRR7755657 | Other | lineage4.8 | None | SRR1049675 | HR-TB | lineage2.2.1 | None | SRR6045359 | Sensitive | lineage4.9 | None | SRR1175052 | HR-TB | lineage4.9 | None | ERR4769439 | HR-TB | lineage4.9 | None | ERR978755 | RR-TB | lineage4.8 | None | SRR12708414 | HR-TB | lineage2.2.1 | None | SRR10315464 | MDR-TB | lineage4.4.1.1 | None | SRR10993951 | RR-TB | La1.6 | None | ERR978761 | Other | lineage4.8 | None | ERR867542 | HR-TB | lineage4.2.1.1;lineage4.3.3 | None | SRR18003004 | Pre-XDR-TB | lineage2.2.2 | None | SRR18003009 | MDR-TB | lineage2.2.1 | None | SRR7070223 | HR-TB | lineage3 | None | ERR2513382 | RR-TB | lineage4.1.1.3 | None | ERR4819357 | Sensitive | lineage4.9 | None | SRR7069347 | Other | lineage4.1.2.1 | None | SRR11342668 | Pre-XDR-TB | lineage4.8.1 | None | SRR11349191 | Pre-XDR-TB | lineage4.3.3 | None | SRR023450 | RR-TB | lineage2.2.1 | None | SRR1180345 | Other | lineage4.9 | None | ERR2600562 | MDR-TB | lineage2.2.1;lineage4.8 | None | SRR11342649 | MDR-TB | lineage4.3.3 | None | SRR18003013 | Pre-XDR-TB | lineage4.4.2 | None | SRR18002941 | RR-TB | lineage2.2.1 | None | SRR18003042 | Other | lineage2.2.1 | None | ERR867524 | Pre-XDR-TB | lineage4.2.1 | None | SRR6045485 | Other | lineage4.9 | None | SRR21469200 | Other | La1.7.1 | None | ERR473323 | HR-TB | lineage4.9 | None | SRR1180391 | Sensitive | lineage4.9 | None | SRR6046852 | MDR-TB | lineage3 | None | SRR1173719 | Other | lineage4.9 | None | SRR18002974 | Other | lineage2.2.1 | None | SRR1735596 | RR-TB | lineage4.9 | None | SRR11349211 | Pre-XDR-TB | lineage4.3.3 | None | ERR019855 | Other | lineage3 | None | SRR18913750 | Other | lineage2.2.1 | None | ERR4769554 | RR-TB | lineage4.9 | None | ERR978726 | RR-TB | lineage4.8 | None | ERR978756 | Other | lineage4.8 | None | SRR15316595 | RR-TB | lineage4.4.2 | None | SRR12708413 | HR-TB | lineage4.1.1.3 | None | SRR22175249 | Pre-XDR-TB | lineage2.2.1 | None | SRR7131229 | Other | lineage4.1.2.1 | None | SRR6045664 | Other | lineage4.2.1 | None | SRR7131123 | Other | lineage4.8 | None | ERR2600609 | Other | lineage4.8 | None | SRR7069835 | Other | lineage2.2.1 | None | SRR7069784 | Other | lineage1.2.2.2 | None | ERR4872322 | Pre-XDR-TB | lineage2.2.1 | None | SAMEA3501015 | Other | lineage4.8 | None | ERR867526 | MDR-TB | lineage2.2.1 | None | SRR6044983 | Other | lineage3.1.1 | None | SRR1181237 | Sensitive | lineage2.2.1;lineage4 | None | ERR3275709 | HR-TB | lineage3 | nl | ERR983238 | MDR-TB | lineage2.2.1.1 | None | ERR4769408 | Other | La1.3 | None | ERR9117740 | Other | lineage3.1.1 | None | ERR4769423 | Other | La1.3 | None | SRR11342642 | MDR-TB | lineage4.1.1.1 | None | ERR5908124 | Other | lineage4.8 | None | SRR1184114 | Sensitive | lineage2.2.1;lineage4.9 | None | SRR18002963 | Other | lineage2.2.1 | None | SRR21658550 | Other | lineage1.1.1 | None | ERR067712 | Sensitive | lineage4.9 | None | SRR6045553 | Other | lineage4.1.2.1;lineage4.9 | None | SRR6045613 | Other | lineage3.1.3 | None | ERR4817434 | Other | lineage3 | None | SRR7755645 | Pre-XDR-TB | lineage2.2.1 | None | ERR987707 | MDR-TB | lineage4.7 | None | SRR9971150 | RR-TB | lineage4.8.1 | None | ERR2228838 | Other | lineage4.8 | None | SRR16156775 | Other | lineage4.9 | None | ERR867567 | RR-TB | lineage3 | None | ERR9787033 | Sensitive | lineage6.1.2 | None | ERR2229198 | Sensitive | lineage4.8 | None | ERR978750_ERR978752_ERR978751 | RR-TB | lineage4.8 | None | SRR11349184 | MDR-TB | lineage2.2.1 | None | SRR19304094 | Other | lineage6.1.2 | None | SRR16627752 | RR-TB | lineage4.4 | None | ERR978748 | Other | lineage4.8 | None | SRR10315751 | MDR-TB | lineage4.8 | None | ERR978755_ERR978756_ERR978754_ERR978757 | RR-TB | lineage4.8 | None | SRR11972417 | MDR-TB | lineage2.2.1 | None | SRR3675389 | Other | lineage4.9 | None | ERR978693 | Other | lineage4.8 | None | SRR1181283 | Sensitive | lineage4.9 | None | SRR13888750 | Other | La2 | None | SRR22424787 | Sensitive | lineage4.9 | None | SRR21469201 | Other | La1.7.1 | None | SRR7645901 | MDR-TB | lineage2.2.1 | None | SRR12708370 | Pre-XDR-TB | lineage2.2.2 | None | ERR10796572 | Other | lineage4.3.4.1;lineage4.9 | None | SRR6153166 | Other | lineage1.2.1.2.1 | ca | ERR4819933 | Sensitive | lineage4.9 | None | ERR6359074 | HR-TB | lineage4.9 | None | SRR12708411 | HR-TB | lineage1.2.2.2 | None | ERR867540 | MDR-TB | lineage2.2.1 | None | SRR18002945 | Other | lineage2.2.1 | None | SRR12708392 | Other | lineage2.2.1 | None | ERR10796595 | Other | lineage4.9 | None | ERR867572 | Other | lineage4.9 | None | SRR18003027 | Other | lineage2.2.1 | None | SRR11342636 | MDR-TB | lineage4.3.3 | None | SRR18003046 | MDR-TB | lineage2.2.1 | None | SRR20969542 | Other | lineage4.4.2 | None | SRR6045125 | Other | lineage1.1.2 | None | ERR4814639 | HR-TB | lineage4.9 | None | SRR5818586 | RR-TB | lineage4.2.2.2 | None | SRR7069797 | Sensitive | lineage3 | None | SRR3675509 | Other | lineage4.9 | None | SRR7069030 | Other | lineage3 | None | SRR18003012 | Pre-XDR-TB | lineage2.2.1 | None | SRR6397815 | Other | lineage4.4.1.1 | None | SRR7070176 | Other | lineage3 | None | SRR1180319 | Sensitive | lineage4.9 | None | SRR6367397 | Other | lineage4.1.2.1 | None | SRR5341267 | Pre-XDR-TB | lineage3 | None | ERR4596902 | MDR-TB | lineage3 | None | SRR7069957 | Sensitive | lineage4.1.2.1 | None | SRR7070419 | Other | lineage3 | None | SRR7069664 | Other | lineage4.1.2 | None | ERR3276170 | Other | lineage4.1.2.1 | nl | SRR1172885 | HR-TB | lineage4.9 | None | ERR4769552 | Sensitive | La1.3 | None | SRR18213726 | Other | lineage3 | None | SRR6046064 | Other | lineage3 | gb | SRR19303815 | Other | lineage4.8 | None | SRR11349203 | MDR-TB | lineage4.4.1.1 | None | ERR4769493 | Other | lineage4.9 | None | ERR4821616 | Other | lineage1.1.3.1 | None | SRR6045705 | Other | lineage4.9 | None | ERR1023509 | Other | lineage4.9 | None | ERR10796631 | Other | lineage4.3.4.2;lineage4.9 | None | SRR6044904 | Other | lineage3 | None | SRR1180446 | Other | lineage4.9 | None | SRR14179705 | Pre-XDR-TB | lineage3 | None | SRR6045944 | Other | lineage4.1.2.1 | None | SRR19304109 | Sensitive | lineage4.8 | None | ERR4816762 | Sensitive | lineage4.9 | None | SRR9971017 | HR-TB | lineage2.2.1 | None | ERR4769444 | HR-TB | lineage4.9 | None | SRR7645906 | Other | lineage2.2.1 | None | SRR6045424 | Other | lineage1.1.2 | None | SRR7070665 | HR-TB | lineage3 | None | SRR5007161 | RR-TB | lineage4.1.1.3.1;lineage4.9 | None | SRR5007165 | Other | lineage3 | None | SRR1181403 | Other | lineage4.9 | None | ERR4769417 | Pre-XDR-TB | lineage4.9 | None | SRR7069922 | Other | lineage2.2.1 | None | ERR978746_ERR978747_ERR978748 | RR-TB | lineage4.8 | None | SRR18003015 | MDR-TB | lineage2.2.1 | None | ERR9117812 | Other | lineage4.3.1.1 | None | ERR4815783 | Other | lineage4.1.2.1 | gb | SRR11342658 | RR-TB | lineage4.1.2 | None | ERR387051 | Other | lineage4.9 | None | SRR11342684 | HR-TB | lineage4.4.1.1 | None | ERR4816610 | Other | lineage4.3.3 | None | ERR10219876 | Other | lineage4.3.4.2 | None | ERR4818624 | Other | lineage4.3.4.2.1 | None | SRR1172807 | Sensitive | lineage4.9 | None | SRR12708399 | MDR-TB | lineage4.3.4.2.1 | None | SRR1180300 | Sensitive | lineage4.9 | None | SRR1180375 | Sensitive | lineage4.9 | None | SRR19303820 | RR-TB | lineage4.8 | None | ERR2515230 | Sensitive | lineage4.8 | None | SRR6046440 | Other | lineage3.1.2.2 | None | ERR502481 | RR-TB | lineage4.9 | None | ERR978694_ERR978693 | Other | lineage4.8 | None | SRR1180444 | Sensitive | lineage4.9 | None | SRR6046839 | Other | lineage4.9 | None | SRR1180946 | Sensitive | lineage2;lineage4.9 | None | ERR9117827 | Other | lineage1.2.2.2 | None | SRR1172717 | Sensitive | lineage4.9 | None | ERR8774355 | MDR-TB | lineage2.2.1 | None | SRR11342669 | Other | lineage4.8 | None | ERR4815022 | Other | lineage3.1.2.1 | None | ERR10796564 | Other | lineage4.3.3 | None | SRR5007167 | RR-TB | lineage4.1.1.3.1 | None | SRR7755655 | Other | lineage4.1.2.1 | None | SRR6045843 | Other | lineage4.2.2.2 | None | SRR6046616 | Other | lineage4.3.1.1 | None | SRR6045957 | Other | lineage4.9 | None | SRR7069800 | Other | lineage3.1.2.1 | None | SRR7645899 | Other | lineage2.2.1 | None | ERR4817667 | HR-TB | lineage4.8 | None | SRR7069255 | Other | lineage4.1.2 | None | SRR7069518 | Other | lineage4.8 | None | SRR7070320 | Other | lineage4.8 | None | ERR10796634 | Other | lineage4.7 | None | SRR11342687 | RR-TB | lineage4.2.2.2 | None | SRR3618864 | Pre-XDR-TB | lineage2.2.1 | None | SRR3675231 | MDR-TB | lineage4.9;lineage7 | None | ERR978752 | Other | lineage4.8 | None | ERR176741 | Other | lineage4.9 | None | ERR867555 | Other | lineage3 | None | ERR867569 | Other | lineage4.9 | None | ERR2027257 | Other | lineage4.1.2.1 | None | SRR7069946 | Other | lineage4.8 | None | ERR3275941 | RR-TB | lineage4.3 | nl | ERR5917972 | MDR-TB | lineage4.4.1.1 | za | ERR10796618 | Other | lineage4.3.4.1 | None | ERR4815550 | Other | lineage2.2;lineage4.9 | None | ERR10796620 | Other | lineage4.1.1.1 | None | SRR6045267 | RR-TB | lineage4.8 | None | ERR108125 | RR-TB | lineage4.9 | None | ERR216965 | Sensitive | lineage4.9 | None | SRR7131147 | Other | lineage4.1.2.1 | None | SRR7070521 | Other | lineage4.2.1.1 | None | SRR7755688 | Pre-XDR-TB | lineage4.2.1 | None | SRR7645927 | Other | lineage4.8 | None | SRR12708407 | HR-TB | lineage4.3.2.1 | None | SRR10315579 | Other | lineage2.2.1.1 | None | SRR1175487 | Sensitive | lineage4.9 | None | ERR9786276 | Sensitive | lineage4.8 | None | ERR4816964 | Sensitive | lineage4.9 | None | ERR978762 | Other | lineage4.8 | None | ERR4132460 | MDR-TB | lineage2.2.1 | None | SRR18002984 | MDR-TB | lineage2.2.2 | None | SRR5818647 | Other | lineage4.3.4.2.1 | None | ERR4818561 | Sensitive | lineage4.9 | None | ERR1063855 | Other | lineage4.9 | None | SRR3675230 | Other | lineage3;lineage4 | None | ERR4769433 | RR-TB | lineage4.9 | None | SRR6046521 | Other | lineage4.4.1.1 | None | SRR1180420 | Sensitive | lineage4.9 | None | ERR10796563 | Other | lineage4.3.3 | None | SRR11342660 | MDR-TB | lineage2.2.1 | None | ERR867554 | Other | lineage4.3.4.1 | None | SRR6152980 | HR-TB | lineage4.8 | ca | SRR7070293 | Other | lineage4.8 | None | SRR6046020 | Other | lineage3 | None | SRR6046447 | Sensitive | lineage4.8 | gb | SRR19304104 | Other | lineage4.8 | None | ERR3797063 | Sensitive | La3;lineage4.9 | None | ERR4816470 | HR-TB | lineage3 | None | SRR7069193 | Other | lineage4.3.1.1 | None | ERR911930 | Other | lineage4.8 | None | SRR3675582 | Other | lineage4.9 | None | ERR6866125 | Sensitive | lineage4.1.2.1 | None | SRR11342689 | Other | lineage4.1.2.1 | None | SRR6046484 | Other | lineage1.2.2.2 | None | SRR11342688 | Other | lineage4.2.2.2 | None | SRR6044841 | Other | lineage4.9 | None | SRR6044958 | Other | lineage4.4.1.1 | None | SRR6046246 | Other | lineage3 | None | ERR9117725 | Other | lineage4.1.1.1 | None | SAMEA3450033 | Other | lineage4.8 | None | ERR4812763 | Other | lineage2.2.1 | None | SRR18002985 | HR-TB | lineage2.2.1 | None | SRR18002967 | HR-TB | lineage2.2.1 | None | SRR7069669 | Other | lineage3.1.1 | None | ERR10796596 | Other | lineage4.9 | None | SRR6046802 | Other | lineage4.9 | None | SRR12062542 | Pre-XDR-TB | lineage2.2.1 | None | ERR3439489 | RR-TB | La1.8.1 | None | ERR171142 | Other | lineage3.1.1;lineage4.9 | None | SRR7131145 | Other | lineage4.1.2.1 | None | SRR11342643 | MDR-TB | lineage4.1.1.1 | None | ERR10796558 | Sensitive | lineage4.3.4.1;lineage4.9 | None | SRR6045928 | Other | lineage4.9 | None | ERR10796582 | Other | lineage4.3.4.1 | None | ERR10796593 | Other | lineage4.3 | None | SRR11342698 | RR-TB | lineage4.4.1.1 | None | SRR7069319 | Other | lineage4.5 | None | ERR11465626 | Sensitive | lineage4.3.4.2.1 | None | ERR4814976 | Other | lineage4.9 | None | ERR5311077 | Other | La1.8.1 | None | SRR18003049 | Other | lineage2.2.1 | None | SRR6046848 | Other | lineage4.6.5 | None | ERR2446154 | Sensitive | lineage4.4.1.1 | nl | ERR978747 | Other | lineage4.8 | None | ERR3468488 | Other | La1.8.1 | None | SRR6046250 | Other | lineage4.9 | None | ERR3797062 | RR-TB | lineage4.9 | None | SRR2024953 | MDR-TB | lineage2.2.1 | cn | ERR4819546 | HR-TB | lineage3 | None | ERR2228900 | Other | lineage4.8 | None | ERR867522 | Pre-XDR-TB | lineage2.2.1 | None | ERR867566 | Other | lineage4.9 | None | DRR185024 | Other | lineage2.2.2 | None | ERR4818831 | Other | lineage3 | None | SRR7236330 | Other | La1.8.1 | None | SRR11342696 | MDR-TB | lineage4.4.1.1.1 | None | ERR126597 | HR-TB | lineage4.4.1.2 | None | SRR3619841 | Pre-XDR-TB | lineage2.2.1 | None | SRR18002935 | Pre-XDR-TB | lineage2.2.1 | None | SRR11349201 | MDR-TB | lineage4.1.1.3 | None | SRR7131031 | Other | lineage4.2.2.2 | None | SRR9971256 | MDR-TB | lineage2.2.1 | None | SRR14801652 | HR-TB | lineage4.3.3 | None | ERR3275615 | Sensitive | lineage4.4.1.1 | nl | SRR1180399 | Sensitive | lineage4.9 | None | SRR18002875 | MDR-TB | lineage2.2.2 | None | SRR18002961 | Other | lineage2.2.1 | None | SRR1184329 | Other | lineage4.9 | None | ERR1023236 | Other | lineage6.1.3 | None | ERR10796553 | Other | lineage4.9 | None | SRR3675256 | Other | lineage4.7 | None | ERR9786810 | Sensitive | lineage4.1.2.1 | None | SRR18002980 | Other | lineage2.2.1 | None | SRR18003032 | Other | lineage2.2.1 | None | ERR978734_ERR978733_ERR978735 | RR-TB | lineage4.8 | None | ERR978746 | RR-TB | lineage4.8 | None | DRR188816 | Sensitive | lineage4.2.2 | None | SAMEA3501063 | RR-TB | lineage4.8 | None | SRR11342662 | MDR-TB | lineage4.8.1 | None | SRR1175506 | Sensitive | lineage4.9 | None | SRR1181325 | Sensitive | lineage4.9 | None | SRR14782539 | MDR-TB | lineage4.2.1 | None | SRR7645928 | Other | lineage4.7 | None | SRR11972300 | MDR-TB | lineage2.2.1 | None | SRR18002874 | MDR-TB | lineage2.2.1 | None | SRR1180406 | Sensitive | lineage4.9 | None | SRR5007204 | Other | lineage4.1.2.1 | None | SRR6044936 | Other | lineage4.6 | None | SRR6397733 | Other | lineage4.4.1.2 | None | SRR22048536 | Other | lineage4.3.3 | None | SRR7068875 | Other | lineage3.1.2.2 | None | ERR978733 | RR-TB | lineage4.8 | None | SRR5818572 | Sensitive | lineage4.2.2.2 | None | SRR5818622 | Sensitive | lineage4.2.2.2 | None | SRR6046275 | Other | lineage3.1.1;lineage4 | None | ERR10796562 | Other | lineage4.3.4.1 | None | ERR4972588 | MDR-TB | lineage4.3.2 | None | ERR2228910 | Other | lineage4.8 | None | ERR911929_ERR911930 | Other | lineage4.8 | None | ERR2027209 | MDR-TB | lineage1.2.1.1 | None | ERR10796565 | Other | lineage4.9 | None | ERR867527 | Pre-XDR-TB | lineage2.2.1 | None | SRR9971088 | RR-TB | lineage2.2.1 | None | SRR18002891 | MDR-TB | lineage2.2.1 | None | SRR12708409 | HR-TB | lineage4.3.3 | None | SRR10315556 | Sensitive | lineage2.2.1 | None | SRR7069931 | Other | lineage4.2.2.2 | None | ERR3275321 | Sensitive | lineage3.1.1 | nl | ERR867568 | Other | lineage2.2.1;lineage4 | None | SRR1181215 | Sensitive | lineage4.4.1.1.1 | None | SRR11342640 | MDR-TB | lineage4.3.3 | None | SRR1792025 | Other | La1.8.1 | None | SRR1180440 | Other | lineage4.9 | None | SRR6046815 | Other | lineage3 | None | ERR9787336 | RR-TB | lineage6.1.3 | None | SRR3619764 | Pre-XDR-TB | lineage2.2.1 | None | SRR21727760 | Other | lineage2.2.1 | None | SRR3675265 | Other | lineage4 | None | SRR3675565 | Other | lineage4 | None | ERR4822138 | Other | lineage4.1.2.1 | None | ERR10796640 | Other | lineage4.1.2.1 | None | SRR18002933 | Other | lineage2.2.1 | None | ERR5162090 | RR-TB | lineage4.9 | None | SRR6045191 | Sensitive | lineage4.9 | None | SRR6046655 | Other | lineage4.1.2.1 | None | SRR11972425 | Pre-XDR-TB | lineage2.2.1 | None | SRR18213721 | Other | lineage4.8 | None | SRR7617847 | Other | La1.8.1 | None | SRR7070461 | Other | lineage3 | None | SRR3675552 | Other | lineage4.9 | None | SRR7068873 | Other | lineage4.8 | None | SRR6046117 | Other | lineage4.9 | None | ERR10796571 | Other | lineage4.9 | None | ERR10796589 | Other | lineage4.9 | None | ERR3806588 | Other | lineage6.1.3 | None | SRR3675495 | Other | lineage2.1;lineage4.9 | None | SRR18909918 | Other | lineage2.2.1.1 | None | SRR7070080 | Pre-XDR-TB | lineage3 | None | DRR184982 | Other | lineage2.2.1 | None | ERR867538 | Other | lineage4.2.2.2 | None | SRR7851312 | Other | La1.2 | None | SRR11349172 | RR-TB | lineage4.3.2.1 | None | ERR2513259 | Other | lineage3 | None | ERR736837 | Pre-XDR-TB | lineage4.9 | None | SRR18003038 | Other | lineage2.2.1 | None | ERR867575 | Other | lineage4.9 | None | SRR12708415 | HR-TB | lineage2.2.1 | None | SRR7070469 | Other | lineage4.3.1.1 | None | SRR7070369 | Other | lineage1.2.2.2 | None | SRR16156832 | RR-TB | lineage2.2;lineage4 | None | SRR12708418 | HR-TB | lineage2.2.1 | None | SRR10869071 | MDR-TB | lineage2.2.1 | None | SRR1184021 | Sensitive | lineage4.9 | None | SRR3601585 | Pre-XDR-TB | lineage2.2.1 | None | SRR7131152 | MDR-TB | lineage2.2.1 | None | SRR6045603 | Other | lineage4.1.1.3 | None | ERR2446509 | Other | lineage3 | nl | ERR978761_ERR978762_ERR978760 | RR-TB | lineage4.8 | None | SRR19303796 | Other | lineage4.3.3 | None | SRR7131230 | HR-TB | lineage4.3.4.2 | None | ERR6359066 | HR-TB | lineage4.9 | None | SRR18002976 | Other | lineage2.2.1 | None | SAMEA3501065 | RR-TB | lineage4.8 | None | SRR11342686 | MDR-TB | lineage4.8 | None | SRR11342651 | MDR-TB | lineage4.1.1.1 | None | SRR10315696 | Sensitive | lineage4.3.2.1 | None | ERR5087596 | Other | La1.8.1 | None | SRR1180148 | Sensitive | lineage4.9 | None | SRR6045056 | Other | lineage2.2.1 | gb | SRR6045591 | Other | lineage4.1.2.1 | None | SRR6045516 | Other | lineage3.1.1 | None | SRR6046482 | Other | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | None | ERR4816852 | Other | lineage4.9 | None | SRR6982141 | Other | lineage4.3.3 | None | ERR6359069 | Sensitive | lineage4.9 | None | ERR2228890 | Other | lineage4.8;lineage4.9 | None | SRR7496471 | Sensitive | lineage4 | None | ERR502473 | RR-TB | lineage4.9 | None | SRR7069999 | Sensitive | lineage5.1.3 | None | SRR7070479 | Other | lineage4.1.2 | None | ERR2027290 | Other | lineage3.1.2.1;lineage4.9 | None | SRR18002903 | Pre-XDR-TB | lineage2.2.1 | None | SRR18003047 | MDR-TB | lineage2.2.1 | None | SRR11342653 | MDR-TB | lineage2.2.1 | None | SRR18003007 | MDR-TB | lineage4.5 | None | ERR4796351 | Sensitive | lineage4.9 | None | ERR978760 | RR-TB | lineage4.8 | None | SRR7070329 | Other | lineage3 | None | ERR9896153 | RR-TB | lineage4.4.1.1 | None | SRR16089407 | Other | lineage4.8 | None | ERR867523 | Pre-XDR-TB | lineage2.2.1 | None | ERR485006 | HR-TB | lineage4.9 | None | ERR3283032 | Other | lineage4.9 | None | SRR6046359 | Other | lineage4.7 | None | ERR867541 | MDR-TB | lineage4.2.1 | None | SRR7069137 | Other | lineage4.8 | None | SRR20969475 | Other | lineage1.2.1.2 | None | SRR6046376 | Other | lineage3 | None | SRR1183054 | Sensitive | lineage4.9 | None | SRR7069251 | Other | lineage3 | None | ERR9117788 | Other | lineage3 | None | SRR6046668 | Sensitive | lineage1.1.2 | gb | SRR5007193 | RR-TB | lineage4.1.1.3.1 | None | SRR1180977 | Sensitive | lineage4.9 | None | ERR323037 | Other | lineage4.9 | None | SRR1181349 | Sensitive | lineage4 | None | ERR10796583 | Other | lineage2.2.1 | None | SRR6045290 | RR-TB | M.canetti;lineage2.1;lineage4.9 | None | SRR18002881 | Pre-XDR-TB | lineage2.2.1 | None | ERR4596910 | Sensitive | lineage4.9 | None | ERR6358951 | Sensitive | lineage4.9 | None | SRR7535047 | RR-TB | lineage4.6.1.1 | None | ERR2027230 | Other | lineage4.2.2.2 | None | SRR14334194 | Pre-XDR-TB | lineage2.2.1 | None | SRR11342638 | MDR-TB | lineage4.4.1.1.1 | None | SRR7069648 | Other | lineage4.6.2.2 | None | SRR3675449 | Other | M.canetti;lineage4.9 | None | SRR6832644 | Other | lineage4.3.3;lineage4.9 | None | ERR2886463 | Sensitive | lineage2.2.1 | None | SRR21677886 | Sensitive | lineage4.9 | None | SRR1175512 | Sensitive | lineage4.9 | None | SRR16156697 | RR-TB | lineage2.2.1 | None | ERR3797065 | RR-TB | lineage4.9 | None | SRR18003052 | Other | lineage2.2.1.1 | None | ERR9786164 | RR-TB | lineage4.1.1.3 | None | SRR1062928 | Other | lineage4.1.2.1;lineage4.9 | None | ERR502470 | RR-TB | lineage4.9 | None | SRR9971080 | RR-TB | lineage2.2.1 | None | SRR18002926 | Other | lineage2.2.1 | None | ERR502517 | Other | lineage5.1.1 | None | SRR1180413 | Sensitive | lineage4.9 | None | SRR1173185 | Other | lineage4.9 | None | ERR2229147 | Other | lineage4.8 | None | ERR978726_ERR978727 | RR-TB | lineage4.8 | None | ERR1023502 | MDR-TB | lineage2;lineage4 | None | SRR6045422 | Other | lineage4.3.1.1 | None | SRR7645972 | MDR-TB | lineage4.2.1 | None | SRR18002908 | Other | lineage2.2.1 | None | SRR6046159 | Other | lineage4.8.2 | None | SRR10315551 | Sensitive | lineage2.2.1 | None | SRR18002998 | Pre-XDR-TB | lineage2.2.2 | None | SRR7069027 | MDR-TB | lineage4.3.4.2 | None | SRR9971246 | MDR-TB | lineage4.1.1.3 | None | ERR212114 | Other | lineage4.3.4.2.1 | None | ERR867573 | Other | lineage4.9 | None | SRR11342655 | MDR-TB | lineage2.2.1 | None | ERR5979454 | Pre-XDR-TB | lineage3 | None | ERR9786528 | Sensitive | lineage4.6.2.2 | None | ERR2027250 | Other | lineage3.1.2 | None | ERR736831 | Other | lineage4.9 | None | ERR10796577 | Other | lineage4.9 | None | SRR12708419 | Other | lineage4.3.3 | None | ERR6359070 | Sensitive | lineage4.9 | None | SRR1735598 | RR-TB | lineage4.9 | None | SRR21686597 | Sensitive | lineage4.1.2.1 | None | SRR7070134 | Other | lineage3.1.1 | None | SRR1181368 | Other | lineage4.9 | None | ERR4769442 | Sensitive | lineage4.9 | None | SRR11342646 | HR-TB | lineage3 | None | SRR1173281 | Other | lineage3 | None | SRR6046729 | Other | lineage3 | None | ERR4819462 | Sensitive | lineage4.9 | None | SRR1180355 | Sensitive | lineage4.9 | None | SRR1181256 | Other | lineage4.9 | None | SRR18003002 | MDR-TB | lineage2.2.1 | None | SRR19325518 | MDR-TB | lineage2.2.1 | None | SRR9971372 | MDR-TB | lineage4.1.1.1 | None | SRR18003045 | Other | lineage2.2.1 | None | ERR10796599 | Other | lineage4.8 | None | ERR10796597 | Other | lineage4.3.3 | None | SRR15508556 | Other | lineage4.3.4.1 | None | SRR1175507 | Sensitive | lineage4.1.1.3;lineage4.9 | None | SRR1180312 | Sensitive | lineage4.9 | None | SRR1049726 | Other | lineage4.1.2.1;lineage4.4.1.1 | None | SRR3675555 | HR-TB | lineage2.1;lineage4.9;lineage7 | None | SRR6044952 | Other | lineage4.9 | None | SRR6045909 | Other | lineage4.8.1 | None | SRR18911231 | Sensitive | lineage4.1.1.3 | None | SRR7646018 | MDR-TB | lineage4.2.1 | None | ERR867544 | Other | lineage4.9 | None | ERR867570 | RR-TB | lineage4.9 | None | SRR023487 | RR-TB | lineage2.2.1 | None | SRR1175513 | Sensitive | lineage4.9 | None | SRR12062493 | Pre-XDR-TB | lineage4.4.2 | None | ERR10796591 | Other | lineage4.9 | None | SRR6045832 | Other | lineage4.9 | None | ERR4819383 | RR-TB | lineage4.9 | None | SRR16278274 | Other | La1.4 | None | ERR9992879 | XDR-TB | lineage4.3.3 | None | SRR9971032 | RR-TB | lineage2.2.1 | None | SRR1181351 | Sensitive | lineage4.9 | None | SRR6045384 | Other | lineage4.1.2.1 | None | ERR10796598 | Other | lineage4.9 | None | SRR21469202 | Other | La1.7.1 | None | SRR7070515 | Other | lineage1.1.3.1 | None | ERR867525 | Pre-XDR-TB | lineage2.2.1 | None | ERR1034647 | MDR-TB | lineage4.1.1.3 | None | ERR2851356 | Sensitive | lineage4.9 | None | ERR4815815 | Sensitive | lineage4.9 | None | ERR9992784 | XDR-TB | lineage2.2.2 | None | ERR473334 | HR-TB | lineage4.9 | None | SRR1181402 | Sensitive | lineage4.9 | None | SRR6046442 | Other | lineage3 | None | ERR176560 | HR-TB | La1.7;lineage4.9 | None | SRR6153150 | Other | lineage3.1.1 | None | SRR7068927 | Other | lineage1.2.2.2 | None | SRR18003023 | Other | lineage2.2.1 | None | ERR4817069 | RR-TB | None | SRR11342695 | MDR-TB | lineage4.8 | None | SRR7068971 | Sensitive | lineage3 | None | SRR9971122 | MDR-TB | lineage4.8 | None | SRR9971333 | MDR-TB | lineage4.1.1.3 | None | ERR10796635 | Other | lineage4.8 | None | ERR4818536 | Other | lineage4.9 | None | ERR4769418 | Other | La1.2 | None | SRR13423546 | Other | lineage4.4.2 | None | SRR5341365 | Pre-XDR-TB | lineage3 | None | SRR6046135 | Sensitive | lineage4.1.2.1 | None | ERR10796555 | Other | lineage4.1.2.1 | None | ERR10796629 | Other | lineage4.1;lineage4.9 | None | ERR212034 | HR-TB | La1.7;lineage4.9 | None | SRR11342671 | RR-TB | lineage4.1.3 | None | SRR11342673 | RR-TB | lineage4.3.4.2 | None | SRR17567917 | RR-TB | lineage4.4.1.1 | None | SRR5818672 | Other | lineage1.2.2.2 | None | ERR017781 | Other | lineage3 | None | ERR978694 | Other | lineage4.8 | None | ERR9811805 | MDR-TB | lineage4.8 | None | SRR6045642 | Other | lineage3.1.2.2 | None | SRR7496523 | Other | lineage4.7 | None | SRR9971270 | RR-TB | lineage2.2.1 | None | SRR11462861 | Other | La1.8.1 | None | ERR2513405 | Other | lineage2.2.1 | None | SRR1173310 | Other | lineage3.1.1 | None | SRR1181214 | Other | lineage4.9 | None | SRR12708406 | HR-TB | lineage2.2.1;lineage4.9 | None | SRR6046343 | Other | lineage2.2.1 | None | SRR7131287 | Other | lineage2.2.1.1 | None | SRR10315693 | RR-TB | lineage4.1.2 | None | SRR6046141 | Other | lineage4.9 | None | SRR1140736 | Other | lineage4.1.2.1 | None | SRR1180410 | Sensitive | lineage4.9 | None | SRR7069441 | Sensitive | lineage4.8 | None | ERR10796561 | Other | lineage4.3.2 | None | SRR18002947 | MDR-TB | lineage2.2.1 | None | SRR18213736 | Other | lineage3 | None | ERR9117732 | Other | lineage1.2.2.2 | None | ERR3275190 | Other | lineage3 | nl | ERR4796577 | HR-TB | None | SRR11342644 | MDR-TB | lineage4.4.1.1.1 | None | SRR1173740 | Other | lineage3;lineage4 | None | SRR9971144 | RR-TB | lineage2.2.1 | None | ERR10796578 | Other | lineage2.2.1 | None | SRR16058249 | Sensitive | lineage4.2.2.2 | None | SRR18002964 | Other | lineage2.2.1 | None | SRR18002994 | MDR-TB | lineage4.2.2 | None | SRR7070154 | Other | lineage4.4.1.1 | None | ERR4830549 | MDR-TB | lineage4.1.1.3 | None | SRR11342647 | MDR-TB | lineage4.1.1.3 | None | SRR18003033 | Other | lineage2.2.1 | None | ERR8975044 | Other | lineage4.1.1.2 | None | ERR978735 | Other | lineage4.8 | None | SRR8758877 | MDR-TB | lineage4.1.1.1 | None | SRR1792022 | Other | La1.8.1 | None | SRR3675527 | Other | lineage4.9 | None | ERR867571 | Other | lineage4.9 | None | SRR10214505 | Sensitive | lineage1.2.1.2 | None | SRR7069074 | Other | lineage3 | None | SRR1181390 | Sensitive | lineage2.2.1;lineage4.9 | None | SRR7070181 | Other | lineage3 | None | SRR6785281 | Other | lineage4.2.1.1 | None | SRR1196478 | Other | lineage4.9 | None | SRR5709926 | MDR-TB | lineage2.2.1 | None | DRR034348 | Other | lineage2.2.1 | None | ERR3283006 | RR-TB | lineage4.9 | None | SRR1792011 | Other | La1.8.1 | None | ERR978754 | RR-TB | lineage4.8 | None | ERR3324368 | RR-TB | lineage1.1.2;lineage6.2.3 | None | SAMEA3501070 | RR-TB | lineage4.8 | None | SRR11342664 | MDR-TB | lineage2.2.2 | None | SAMEA3501052 | RR-TB | lineage4.8 | None | SRR19303899 | Other | lineage3 | None | SAMEA3501046 | RR-TB | lineage4.8 | None | SRR7070144 | Other | lineage4.8 | None | SRR6045743 | Other | lineage3 | None | SAMEA3501067 | RR-TB | lineage4.8 | None | SRR20632814 | Sensitive | lineage4.9 | None | SRR7645971 | Other | lineage2.2.1 | None | ERR978757 | RR-TB | lineage4.8 | None | SRR11349207 | RR-TB | lineage2.2.1 | None | SRR6046766 | Other | lineage3.1.1 | None | ERR4819175 | Other | lineage4.1.1.3 | gb | ERR4816231 | Sensitive | lineage4.1.1.1 | None | ERR5917985 | MDR-TB | lineage2.2.1 | None | ERR5979407 | Other | lineage3 | None | ERR867521 | MDR-TB | lineage2.2.1 | None | SRR18003024 | RR-TB | lineage2.2.1 | None | SRR1175491 | MDR-TB | lineage4.3.4.1 | None | SRR7755649 | MDR-TB | lineage4.2.1 | None | ERR9786076 | Sensitive | lineage3 | None | ERR978734 | RR-TB | lineage4.8 | None | SRR12062533 | Pre-XDR-TB | lineage2.2.1.1 | None | SRR12634609 | MDR-TB | lineage3.1.1 | None | SRR3675539 | HR-TB | lineage4.9;lineage7 | None | ERR4769550 | Sensitive | La1;lineage4.9 | None | SRR18913742 | Sensitive | lineage3.1.3 | None | SRR19303907 | Other | lineage4.8 | None | SRR7070195 | Sensitive | lineage3.1.2.1 | None | SRR7070458 | Sensitive | lineage3 | None | SRR12708396 | MDR-TB | lineage4.3.2.1 | None | SRR16156804 | Sensitive | lineage4.9 | None | SRR11342648 | MDR-TB | lineage4.1.1.3 | None | SRR11349145 | Pre-XDR-TB | lineage4.4.1.1.1 | None | SRR18002981 | Other | lineage2.2.1 | None | SRR22424778 | RR-TB | lineage2.2.1.1 | None | ERR10796627 | Other | lineage4.1.2.1;lineage4.9 | None | ERR9786613 | Sensitive | lineage4.1.2.1 | None | ERR978727 | Other | lineage4.8 | None | SRR1049725 | Other | lineage4.1.2.1;lineage4.4.1 | None | ERR4815310 | Other | lineage2.2.1;lineage4.9 | None | SRR7069097 | Other | lineage3.1.2.1 | None | SRR7069314 | Other | lineage3 | None | SRR18003030 | Pre-XDR-TB | lineage2.2.1 | None | SRR19304057 | Sensitive | lineage4.4.1.2 | None | SRR6046273 | Other | lineage3.1.2 | None | SRR18002930 | MDR-TB | lineage2.2.1 | None | ERR3077969 | Other | La1.3 | None |
|---|
