EBG00000313339 - n.1092C>T


Drug resistance types
116 Sensitive 106 RR-TB 70 HR-TB 104 MDR-TB 56 Pre-XDR-TB 3 XDR-TB 440 Other
lineage Counts
lineage Count
lineage4.2.1 9
lineage2.2.1 123
lineage4.5 3
lineage4.4.2 7
lineage4.1.2.1 56
lineage4.8 62
lineage4.8.1 3
lineage4.9 167
lineage1.1.2 10
La1.2 2
lineage4.2.2 2
lineage2.2.2 8
lineage4 48
lineage3 69
lineage4.3.3 20
lineage4.1.1.3 19
lineage4.9;lineage1.1 1
lineage4.9;lineage4.1 1
lineage4.3.4.2 2
lineage4.3.2 5
lineage4.3.4.1 5
lineage4.9;lineage4.3.4 1
lineage4.6 4
lineage4.3 3
lineage4.1.2 5
lineage4.1.1 8
lineage4.4.1.2 4
lineage4.3.4 1
23
La1.8.1 15
lineage6.2.3;lineage1.1.2 1
lineage6 5
lineage4.6.2.2 11
La1.3 10
lineage4.9;La1.3 2
lineage4.5;lineage2.2.1 1
lineage4.4.1.1 23
lineage3;lineage2.2.1 1
lineage4.1.1.2 2
lineage4.2.2.2 11
lineage1.2.2.2 5
lineage3.1.1 12
lineage3.1.3 3
lineage4.8.2 4
lineage4.3.1.1 5
lineage1.1.1 4
lineage4.7 9
lineage2.2.1.1 7
lineage1.2.1.2 3
lineage4.3.2.1 3
lineage4.4.1.1.1 5
lineage4.8;lineage4.3.3 4
lineage4.4.1.1;lineage4.1.2.1 1
lineage4.3.4.2.1 5
La1.6 1
lineage4.6.3 1
lineage4.9;lineage2.2 1
lineage2.2 3
lineage2 1
La2 1
La1.4 1
lineage4.4 1
lineage2.2.2;lineage2.2.1 1
lineage1.2.1.2.1 7
La1.7.1 3
lineage4.1.2;lineage3.1 2
lineage6.1.1 1
lineage3.1.2 6
lineage4.9;lineage3.1.1 1
lineage4.6.5 2
lineage4.4.1 1
lineage4.1 1
lineage1.2.1.1 2
lineage4.1.1.3.1 6
lineage3.1.2.1 4
lineage3.1 3
lineage4;lineage2 1
lineage4;lineage3 1
lineage4.1.1.3.1;lineage3.1.2 1
lineage5.1.1 2
lineage6.1.3 1
lineage1.1.1.1 2
lineage1.1.3.1 2
lineage3.1.2.2 6
lineage4.2.2.2;lineage3 1
lineage4.2 1
lineage1.1.3.3 1
lineage4.8;lineage3 1
lineage4.2.1.1 1
lineage4.6.1.1 1
spoligotype Counts
spoligotype Count
None 895
Geographic prevalence
Country level data for this variant is available for 87 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR7646018 MDR-TB lineage4.2.1 None
SRR9971080 RR-TB lineage2.2.1 None
SRR9971088 RR-TB lineage2.2.1 None
SRR9971089 RR-TB lineage2.2.1 None
SRR8651616 MDR-TB lineage2.2.1 None
SRR8651617 Pre-XDR-TB lineage4.5 None
SRR8651633 Pre-XDR-TB lineage4.4.2 None
SRR7755655 Other lineage4.1.2.1 None
SRR7755645 Pre-XDR-TB lineage2.2.1 None
SRR7755649 MDR-TB lineage4.2.1 None
SRR7755657 Other lineage4.8 None
SRR9971144 RR-TB lineage2.2.1 None
SRR9971122 MDR-TB lineage4.8 None
SRR7755688 Pre-XDR-TB lineage4.2.1 None
DRR184982 RR-TB lineage2.2.1 None
SRR9971150 RR-TB lineage4.8.1 None
SRR8902558 Other lineage4.9 None
SRR7765062 Pre-XDR-TB lineage4.1.2.1 None
ERR323048 Pre-XDR-TB lineage4.9 None
SRR9217359 MDR-TB lineage1.1.2 None
SRR7851312 Other La1.2 None
DRR034348 Other lineage2.2.1 None
DRR188816 Sensitive lineage4.2.2 None
DRR185024 Other lineage2.2.2 None
ERR067712 HR-TB lineage4 None
ERR017781 Other lineage3 None
ERR019855 Other lineage3 None
ERR037234 Sensitive lineage4.9 None
ERR10796564 Other lineage4.3.3 None
ERR1023502 MDR-TB lineage2.2.1 None
ERR1034647 MDR-TB lineage4.1.1.3 None
ERR1063855 Other lineage4 None
ERR10762275 MDR-TB lineage4.2.1 None
ERR10796553 Other lineage4.9;lineage1.1 None
ERR10762495 MDR-TB lineage2.2.1 None
ERR10796558 Sensitive lineage4 None
ERR10796560 MDR-TB lineage4.9;lineage4.1 None
ERR10796563 Other lineage4.3.3 None
ERR10219876 Other lineage4.3.4.2 None
ERR10796555 Other lineage4.1.2.1 None
ERR10796561 Other lineage4.3.2 None
ERR10796562 Other lineage4.3.4.1 None
ERR10796572 Other lineage4.3.4.1 None
ERR10796566 Other lineage4.9;lineage4.3.4 None
ERR10796565 RR-TB lineage4.9 None
ERR10796568 Other lineage4.9 None
ERR10796575 RR-TB lineage4.9 None
ERR10796571 Other lineage4.9 None
ERR10796574 Other lineage4.9 None
ERR10796577 RR-TB lineage4.9 None
ERR10796580 RR-TB lineage4.6 None
ERR10796578 Other lineage2.2.1 None
ERR10796596 Other lineage4.9 None
ERR10796582 HR-TB lineage4.3 None
ERR10796586 Other lineage4.9 None
ERR10796591 MDR-TB lineage4.9 None
ERR10796592 Other lineage4 None
ERR10796595 Other lineage4.9 None
ERR10796581 HR-TB lineage4.1.2 None
ERR10796583 Other lineage2.2.1 None
ERR10796589 Other lineage4.9 None
ERR10796593 RR-TB lineage4 None
ERR10796620 Other lineage4.1.1 None
ERR10796598 RR-TB lineage4.9 None
ERR10796615 Other lineage4 None
ERR10796597 Other lineage4 None
ERR10796599 Other lineage4 None
ERR10796618 Other lineage4.3.4.1 None
ERR10796627 Other lineage4 None
ERR10796629 Other lineage4 None
ERR126597 MDR-TB lineage4.4.1.2 None
ERR10796635 Other lineage4 None
ERR10796640 Other lineage4.1.2.1 None
ERR108125 Pre-XDR-TB lineage4.9 None
ERR10796631 Other lineage4.3.4 None
ERR10796634 Other lineage4 None
ERR3283006 RR-TB lineage4.9 None
ERR3283032 HR-TB None
ERR3283008 Other lineage4.9 None
ERR3283013 MDR-TB lineage4 None
ERR3283048 HR-TB lineage4.9 None
ERR3283046 MDR-TB lineage4.9 None
ERR3468488 RR-TB La1.8.1 None
ERR3324368 RR-TB lineage6.2.3;lineage1.1.2 None
ERR3439265 Other lineage4.9 None
ERR3439489 RR-TB La1.8.1 None
ERR4024582 MDR-TB lineage4.1.2.1 None
ERR3468613 RR-TB La1.8.1 None
ERR3797065 MDR-TB lineage4 None
ERR3797063 HR-TB None
ERR3806588 Other lineage6 None
ERR3468561 HR-TB lineage4.9 None
ERR3797062 RR-TB lineage4.9 None
ERR3797068 Other La1.8.1 None
ERR387051 HR-TB None
ERR4586795 Other La1.8.1 None
ERR4132460 MDR-TB lineage2.2.1 None
ERR4407553 Sensitive lineage4.6.2.2 None
ERR4457829 MDR-TB lineage4.1.2.1 None
ERR4187652 Other lineage4.9 None
ERR4596910 Sensitive lineage4 None
ERR4596902 HR-TB lineage3 None
ERR4769442 HR-TB lineage4 None
ERR473303 Sensitive lineage4.9 None
ERR473323 HR-TB lineage4.9 None
ERR473334 HR-TB lineage4.9 None
ERR473367 Sensitive lineage4.9 None
ERR4769417 Pre-XDR-TB lineage4.9 None
ERR4769423 Other La1.3 None
ERR4769408 Other La1.3 None
ERR4769418 Other La1.2 None
ERR4769433 Pre-XDR-TB lineage4.9 None
ERR4769444 HR-TB lineage4.9 None
ERR4769516 Other La1.3 None
ERR4769495 Other La1.3 None
ERR4769493 Pre-XDR-TB lineage4.9;La1.3 None
ERR4769506 Sensitive La1.3 None
ERR4769548 Other lineage4.9 None
ERR4769514 Other La1.3 None
ERR4769550 Other lineage4.9;La1.3 None
ERR4769551 Other La1.3 None
ERR4769552 Other La1.3 None
ERR4769553 RR-TB lineage4.9 None
ERR4798823 HR-TB lineage4 None
ERR4769554 RR-TB lineage4.9 None
ERR4769555 Other La1.3 None
ERR4796351 MDR-TB lineage4.9 None
ERR4796472 Pre-XDR-TB lineage2.2.1 None
ERR4796577 MDR-TB None
ERR5979454 Pre-XDR-TB lineage3 None
ERR4800297 Other lineage4.1.1.3 in
ERR4811035 Pre-XDR-TB lineage4.5;lineage2.2.1 None
ERR5908124 Other lineage4.8 None
ERR5917972 MDR-TB lineage4.4.1.1 za
ERR5917985 MDR-TB lineage2.2.1 None
ERR5979407 Other lineage3 None
ERR4798998 Pre-XDR-TB lineage3;lineage2.2.1 in
ERR4800197 HR-TB None
ERR4800226 Pre-XDR-TB lineage2.2.1 in
ERR4812495 Other lineage4.1.2.1 pe
ERR6197024 RR-TB lineage4.9 None
ERR6197022 Other lineage4.9 None
ERR6197028 Other lineage4.9 None
ERR6197026 RR-TB lineage4.9 None
ERR6197032 Other lineage4.9 None
ERR6197030 Other lineage4.9 None
ERR6197038 HR-TB lineage4.9 None
ERR6197034 Other lineage4.9 None
ERR6197036 Other lineage4 None
ERR6197042 RR-TB lineage4.9 None
ERR6358951 HR-TB lineage4 None
ERR6197044 RR-TB lineage4.9 None
ERR6359070 Other lineage4.9 None
ERR6359066 HR-TB lineage4 None
ERR6359069 Other lineage4.9 None
ERR6359073 Sensitive lineage4.9 None
ERR6866125 Sensitive lineage4.1.2.1 None
ERR6359074 HR-TB lineage4.9 None
ERR736837 Other lineage4.9 None
ERR736831 HR-TB lineage4.9 None
ERR8975044 Other lineage4.1.1.2 None
ERR8774355 MDR-TB lineage2.2.1 None
ERR9117725 Other lineage4.1.1 None
ERR9117695 Other lineage4.1.2.1 None
ERR9117676 Other lineage4.2.2.2 None
ERR9117699 Other lineage4.1.2.1 None
ERR9117704 Other lineage4.6 None
ERR9117763 HR-TB lineage3 None
ERR9117760 HR-TB lineage4.3 None
ERR9117732 Other lineage1.2.2.2 None
ERR9117740 Other lineage3.1.1 None
ERR9117747 HR-TB lineage4.8 None
ERR9117805 Other lineage4.3.2 None
ERR9117788 Other lineage3 None
ERR9117806 Other lineage4.8 None
ERR9117759 Other lineage3 None
ERR9117781 Other lineage3.1.3 None
ERR9117841 Other lineage4.8.2 None
ERR9117812 Other lineage4.3.1.1 None
ERR9117823 Other lineage1.1.1 None
ERR9117822 Sensitive lineage4.1.2.1 None
ERR9117827 Other lineage1.2.2.2 None
ERR9786613 Sensitive lineage4.1.2.1 None
ERR9786276 Sensitive lineage4.8 None
ERR9119120 Other lineage4.8 None
ERR9786076 Sensitive lineage3 None
ERR9786164 RR-TB lineage4.1.1.3 None
ERR9786528 Sensitive lineage4.6.2.2 None
ERR9786810 Sensitive lineage4.1.2.1 None
ERR9787033 Sensitive lineage6 None
ERR9896153 RR-TB lineage4.4.1.1 None
ERR9787336 Other lineage6 None
ERR987707 MDR-TB lineage4.7 None
ERR9811805 MDR-TB lineage4.8 None
ERR983238 MDR-TB lineage2.2.1.1 None
SRR023487 RR-TB lineage2.2.1 None
ERR9992784 Pre-XDR-TB lineage2.2.2 None
ERR9992879 XDR-TB lineage4.3.3 None
SRR023450 RR-TB lineage2.2.1 None
SRR10315465 MDR-TB lineage4.4.1.1 None
SRR10214505 Sensitive lineage1.2.1.2 None
SRR10315464 MDR-TB lineage4.4.1.1 None
SRR10315556 Sensitive lineage2.2.1 None
SRR10315696 Sensitive lineage4.3.2.1 None
SRR10315551 Sensitive lineage2.2.1 None
SRR10315579 Other lineage2.2.1.1 None
SRR10315641 MDR-TB lineage4.4.1.1.1 None
SRR10315693 RR-TB lineage4.1.2 None
SRR10315751 MDR-TB lineage4.8 None
SRR10315707 MDR-TB lineage4.4.1.1.1 None
SRR1049675 HR-TB lineage2.2.1 None
SRR1049677 MDR-TB lineage4.8;lineage4.3.3 None
SRR1049674 HR-TB lineage2.2.1 None
SRR1049676 MDR-TB lineage4.8;lineage4.3.3 None
SRR1049726 MDR-TB lineage4.4.1.1;lineage4.1.2.1 None
SRR1049725 RR-TB lineage4.1.2.1 None
SRR1062920 MDR-TB lineage4.8;lineage4.3.3 None
SRR1062919 HR-TB lineage2.2.1 None
SRR1062871 MDR-TB lineage4.3.4.2.1 None
SRR1062928 RR-TB lineage4 None
SRR11342648 MDR-TB lineage4.1.1.3 None
SRR10869071 MDR-TB lineage2.2.1 None
SRR10993951 RR-TB La1.6 None
SRR11342643 MDR-TB lineage4.1.1 None
SRR11342679 Other lineage4.6.3 None
SRR11342685 HR-TB lineage4.4.1.1 None
SRR11342688 Other lineage4.2.2.2 None
SRR11349145 Pre-XDR-TB lineage4.4.1.1.1 None
SRR11349135 XDR-TB lineage4.3.3 None
SRR11349147 RR-TB lineage4.3.2.1 None
SRR11349172 RR-TB lineage4.3.2.1 None
SRR11349159 MDR-TB lineage2.2.2 None
SRR11349184 MDR-TB lineage2.2.1 None
SRR11349178 MDR-TB lineage4.4.1.1.1 None
SRR11349207 RR-TB lineage2.2.1 None
SRR11349201 MDR-TB lineage4.1.1.3 None
SRR11349191 Pre-XDR-TB lineage4.3.3 None
SRR11349187 Pre-XDR-TB lineage4.8.1 None
SRR11349203 MDR-TB lineage4.4.1.1 None
SRR11349211 Pre-XDR-TB lineage4.3.3 None
SRR1140574 MDR-TB lineage4.8;lineage4.3.3 None
SRR1140724 HR-TB lineage2.2.1 None
SRR1172717 Other lineage4.9 None
SRR11462861 Other La1.8.1 None
SRR1140736 RR-TB None
SRR1172885 HR-TB lineage4.9 None
SRR1172807 Sensitive lineage4.9 None
SRR1173170 Other lineage4.9 None
SRR1173185 HR-TB lineage4.9 None
SRR1175052 HR-TB lineage4.9 None
SRR1173281 RR-TB lineage3 None
SRR1173421 RR-TB lineage4.9 None
SRR1173450 RR-TB lineage4.9 None
SRR1173719 HR-TB lineage3 None
SRR1173740 Other None
SRR1173310 MDR-TB None
SRR1173770 Other lineage4.9 None
SRR1173833 Other lineage4.9 None
SRR1175472 MDR-TB lineage4 None
SRR1175473 Other lineage4.9 None
SRR1175474 HR-TB lineage4.9 None
SRR1175491 MDR-TB lineage4 None
SRR1175496 HR-TB lineage4.9 None
SRR1175487 Sensitive lineage4.9 None
SRR1175506 Sensitive lineage4.9 None
SRR1175512 Sensitive lineage4.9 None
SRR1175508 Other lineage4.9 None
SRR1175507 MDR-TB lineage4 None
SRR1175513 Other lineage4.9 None
SRR1180319 Sensitive lineage4.9 None
SRR1180148 Sensitive lineage4.9 None
SRR1180252 Other lineage4.9 None
SRR1180250 Other lineage4.9 None
SRR1180300 Sensitive lineage4.9 None
SRR1180312 Sensitive lineage4.9 None
SRR1180375 Sensitive lineage4.9 None
SRR1180355 Sensitive lineage4.9 None
SRR1180345 Other lineage4.9 None
SRR1180406 Sensitive lineage4.9 None
SRR1180391 Sensitive lineage4.9 None
SRR1180399 Sensitive lineage4.9 None
SRR1180440 Other lineage4.9 None
SRR1180413 Sensitive lineage4.9 None
SRR1180420 Sensitive lineage4.9 None
SRR1180410 Sensitive lineage4.9;lineage2.2 None
SRR1180446 Other lineage4.9 None
SRR1180444 Sensitive lineage4.9 None
SRR1181237 Sensitive lineage2.2 None
SRR1181161 Other lineage4.9 None
SRR1181214 Other lineage4.9 None
SRR1180977 Sensitive lineage4.9 None
SRR1181283 Sensitive lineage4.9 None
SRR1181250 Other lineage4.9 None
SRR1181325 Sensitive lineage4.9 None
SRR1181349 Sensitive lineage4.4.1.1.1 None
SRR1181368 Other lineage4.9 None
SRR1181351 Sensitive lineage4.9 None
SRR1184021 Sensitive lineage4.9 None
SRR1181390 Sensitive lineage2 None
SRR1181402 Sensitive lineage4.9 None
SRR1183054 Sensitive lineage4.9 None
SRR1183080 RR-TB lineage4.9 None
SRR11972316 Pre-XDR-TB lineage2.2.1.1 None
SRR11972300 MDR-TB lineage2.2.1 None
SRR1184329 MDR-TB lineage4.9 None
SRR1196478 MDR-TB lineage4.9 None
SRR11972425 Pre-XDR-TB lineage2.2.1 None
SRR11972369 Pre-XDR-TB lineage2.2.1 None
SRR11972417 MDR-TB lineage2.2.1 None
SRR13180363 Sensitive lineage4.1.2.1 None
SRR12634609 MDR-TB lineage3.1.1 None
SRR13423546 Other lineage4.4.2 None
SRR14179705 Pre-XDR-TB lineage3 None
SRR13888750 Other La2 None
SRR14334195 Pre-XDR-TB lineage2.2.1 None
SRR14782539 MDR-TB lineage4.2.1 None
SRR14334194 Pre-XDR-TB lineage2.2.1 None
SRR16058249 Sensitive lineage4.2.2.2 None
SRR14801652 MDR-TB lineage4.3.3 None
SRR15316595 RR-TB lineage4.4.2 None
SRR15508556 Other lineage4.3.4.1 None
SRR16058205 HR-TB lineage2.2.1 None
SRR16278274 Other La1.4 None
SRR16089407 Other lineage4.8 None
SRR16156697 MDR-TB lineage2.2.1 None
SRR16156804 RR-TB lineage4.9 None
SRR16156751 RR-TB lineage4.9 None
SRR16156775 Other lineage4.9 None
SRR16156832 RR-TB None
SRR1792022 Other La1.8.1 None
SRR16627752 RR-TB lineage4.4 None
SRR1735591 Other lineage4.1.2.1 None
SRR17567917 RR-TB lineage4.4.1.1 None
SRR1792011 Other La1.8.1 None
SRR1735596 RR-TB lineage4.9 None
SRR1792025 Other La1.8.1 None
SRR18002872 Pre-XDR-TB lineage2.2.1 None
SRR18002875 MDR-TB lineage2.2.2 None
SRR18002874 MDR-TB lineage2.2.1 None
SRR18002891 MDR-TB lineage2.2.1 None
SRR18002876 MDR-TB lineage2.2.2;lineage2.2.1 None
SRR18002881 Pre-XDR-TB lineage2.2.1 None
SRR18002903 Pre-XDR-TB lineage2.2.1 None
SRR18002901 MDR-TB lineage2.2.1 None
SRR18002908 Other lineage2.2.1 None
SRR18002930 MDR-TB lineage2.2.1 None
SRR18002909 MDR-TB lineage2.2.1 None
SRR18002926 Other lineage2.2.1 None
SRR18002933 Other lineage2.2.1 None
SRR18002929 HR-TB lineage2.2.1 None
SRR18002937 Other lineage2.2.1 None
SRR18002935 Pre-XDR-TB lineage2.2.1 None
SRR18002941 RR-TB lineage2.2.1 None
SRR18002947 MDR-TB lineage2.2.1 None
SRR18002945 RR-TB lineage2.2.1 None
SRR18002967 Pre-XDR-TB lineage2.2.1 None
SRR18002956 HR-TB lineage2.2.1 None
SRR18002963 Other lineage2.2.1 None
SRR18002964 Other lineage2.2.1 None
SRR18002954 Other lineage2.2.1 None
SRR18002961 Other lineage2.2.1 None
SRR18002985 HR-TB lineage2.2.1 None
SRR18002981 Other lineage2.2.1 None
SRR18002980 Other lineage2.2.1 None
SRR18002974 Pre-XDR-TB lineage2.2.1 None
SRR18002976 Other lineage2.2.1 None
SRR18002986 MDR-TB lineage2.2.1 None
SRR18002984 MDR-TB lineage2.2.2 None
SRR18003007 MDR-TB lineage4.5 None
SRR18002994 MDR-TB lineage4.2.2 None
SRR18002995 Other lineage4.4.2 None
SRR18002998 Pre-XDR-TB lineage2.2.2 None
SRR18002999 Pre-XDR-TB lineage2.2.1 None
SRR18003001 Pre-XDR-TB lineage2.2.1 None
SRR18003004 Pre-XDR-TB lineage2.2.2 None
SRR18003013 Pre-XDR-TB lineage4.4.2 None
SRR18003002 MDR-TB lineage2.2.1 None
SRR18003024 RR-TB lineage2.2.1 None
SRR18003012 Pre-XDR-TB lineage2.2.1 None
SRR18003023 Other lineage2.2.1 None
SRR18003009 MDR-TB lineage2.2.1 None
SRR18003042 Other lineage2.2.1 None
SRR18003033 Other lineage2.2.1 None
SRR18003015 MDR-TB lineage2.2.1 None
SRR18003027 Other lineage2.2.1 None
SRR18003030 Pre-XDR-TB lineage2.2.1 None
SRR18003032 Other lineage2.2.1 None
SRR18003038 Other lineage2.2.1 None
SRR18003049 Other lineage2.2.1 None
SRR18003052 Other lineage2.2.1.1 None
SRR18003045 Other lineage2.2.1 None
SRR18003047 MDR-TB lineage2.2.1 None
SRR18003046 MDR-TB lineage2.2.1 None
SRR18911231 Sensitive lineage4.1.1.3 None
SRR18213726 Other lineage3 None
SRR18213736 MDR-TB lineage3 None
SRR18909918 Other lineage2.2.1.1 None
SRR18213721 Other lineage4.8 None
SRR18911462 Sensitive lineage1.2.1.2.1 None
SRR18911555 Other lineage4.1.2.1 None
SRR18912069 Other lineage4.1.2.1 None
SRR18912070 Sensitive lineage4.8 None
SRR19303796 Other lineage4.3.3 None
SRR18913742 Sensitive lineage3.1.3 None
SRR18913750 Other lineage2.2.1 None
SRR18913779 Other lineage3 None
SRR19303775 Other lineage3 None
SRR19303810 Sensitive lineage4.8 None
SRR19303815 Other lineage4.8 None
SRR19303899 Other lineage3 None
SRR19303820 RR-TB lineage4.8 None
SRR19303907 Other lineage4.8 None
SRR19303949 Other lineage4.3.3 None
SRR19303931 Other lineage2.2.1 None
SRR19303917 Other lineage2.2.1 None
SRR19304057 Sensitive lineage4.4.1.2 None
SRR19303985 Other lineage4.8 None
SRR19304094 Other lineage6 None
SRR19304104 Other lineage4.8 None
SRR21469201 Other La1.7.1 None
SRR19304109 Other lineage4.8 None
SRR20969542 Other lineage4.4.2 None
SRR2101625 Other lineage4.1.2;lineage3.1 None
SRR19304115 Other lineage4.1.2.1 None
SRR19324805 Sensitive lineage4.4.1.1 None
SRR19325518 MDR-TB lineage2.2.1 None
SRR20632814 Sensitive lineage4 None
SRR20969475 Other lineage1.2.1.2 None
SRR2100532 Sensitive lineage3 None
SRR21240055 Other lineage4.1.2.1 None
SRR21469202 Other La1.7.1 None
SRR21469200 Other La1.7.1 None
SRR21658372 Sensitive lineage1.2.1.2.1 None
SRR21595944 Other lineage2.2.1 None
SRR21595825 Other lineage1.2.1.2.1 None
SRR21658552 Other lineage6.1.1 None
SRR21658550 Other lineage1.1.1 None
SRR21659828 Sensitive lineage4.1.2.1 None
SRR21722120 Sensitive lineage4.1.2.1 None
SRR21677886 Sensitive lineage4.9 None
SRR21662764 Other lineage2.2.1 None
SRR21686597 Sensitive lineage4.1.2.1 None
SRR21727728 Sensitive lineage4.4.1.1 None
SRR21727760 Other lineage2.2.1 None
SRR21727888 Other lineage1.2.1.2 None
SRR22048536 Other lineage4.3.3 None
SRR22048375 Other lineage4.1.2.1 None
SRR22048374 Sensitive lineage4.8 None
SRR22424743 Pre-XDR-TB lineage1.1.2 None
SRR22175249 Pre-XDR-TB lineage2.2.1 None
SRR22424727 MDR-TB lineage3.1.2 None
SRR22424851 MDR-TB lineage4.3.3 None
SRR22424778 RR-TB lineage2.2.1.1 None
SRR22424787 Sensitive lineage4.9 None
SRR3675474 Other lineage4.1.1 None
SAMEA3501065 RR-TB lineage4.8 None
ERR4815121 HR-TB lineage4.6.2.2 None
SRR3675475 Other lineage4.1.1.3 None
ERR4815301 Other lineage4.4.2 None
ERR4815236 Sensitive lineage2.2.1 gb
ERR4815310 Other None
SRR3601585 Pre-XDR-TB lineage2.2 None
ERR4814453 Sensitive lineage3 None
ERR4815680 Other lineage1.1.2 gb
ERR3275321 Sensitive lineage3.1.1 nl
SRR3675491 Other lineage4.7 None
ERR4815413 Other lineage4.3.4.2.1 None
SRR3675496 Other lineage4.1.1.3 gb
SRR3619764 Pre-XDR-TB lineage2.2 None
SRR3619841 Pre-XDR-TB lineage2.2.1 None
ERR4815783 Other lineage4.1.2.1 gb
SRR3618864 Pre-XDR-TB lineage2.2.1 None
SRR3675227 Other lineage4.9 None
ERR4815705 Sensitive lineage4.8 None
ERR4814690 Sensitive lineage2.2.1 None
ERR4815471 Other lineage4.9 None
ERR4814639 HR-TB lineage4 None
ERR1665405 Pre-XDR-TB lineage2.2.1 None
ERR4812763 Other lineage2.2.1 None
ERR171142 Other lineage4.9;lineage3.1.1 None
SRR3675234 Other None
ERR1750896 Sensitive lineage2.2.1 zw
ERR4814745 Other lineage4.6.5 None
SRR3675230 RR-TB lineage3 None
SRR2024953 MDR-TB lineage2.2.1 cn
ERR1750908 Sensitive lineage4 None
ERR1750938 Other lineage4.4.1 None
ERR4815502 Other lineage4.1 None
SRR3675261 Other lineage1.2.1.1 None
SRR3675265 Other lineage4 None
ERR1750931 Sensitive lineage4.1.2.1 za
SRR3675256 Other lineage4.7 None
SRR3675282 Other None
SRR3675276 Other lineage4.1.2.1 gb
ERR4814905 Other lineage4.8 gb
ERR4814911 Other lineage4.3.3 None
ERR4813263 MDR-TB lineage4.8 None
SRR3675284 HR-TB lineage4.9 None
ERR4814976 Other lineage4.9 None
ERR4815550 Other lineage4 None
SRR3675291 Sensitive lineage4.6 gb
ERR4815039 Other lineage4.1.1.3.1 gb
ERR4815022 Other lineage3.1.2.1 None
SRR3675456 HR-TB None
ERR4815065 Other lineage4.1.2.1 gb
ERR4815075 MDR-TB lineage3 None
ERR4816964 Other lineage4.9 None
SRR3675509 Other lineage4.9 None
ERR4815079 RR-TB lineage3 None
ERR2228965 Other lineage4.8 None
ERR4816968 Other lineage4.2.1 gb
SAMEA3501015 Other lineage4.8 None
SRR3675527 RR-TB lineage4.9 None
ERR4815956 Other lineage1.1.2 None
SRR3675513 Other lineage4.8 None
SRR3675525 Other lineage4.8 None
SRR3675552 RR-TB lineage4.9 None
ERR2027209 MDR-TB lineage1.2.1.1 None
ERR2446580 Sensitive lineage3.1.1 nl
ERR2027255 HR-TB lineage4.4.1.1 None
ERR2027250 Other lineage3.1.2 None
ERR2027230 Other lineage4.2.2.2 None
ERR2027257 Other lineage4.1.2.1 None
ERR2027290 RR-TB lineage3.1 None
SRR3675555 HR-TB None
ERR4816231 Other lineage4 None
ERR212034 HR-TB None
SRR3675565 Other lineage3 None
ERR2229147 Other lineage4.8 None
ERR4816322 Other lineage4.9 None
ERR2446509 Other lineage3 nl
ERR212114 Other lineage4.3.4.2.1 None
ERR4817069 RR-TB None
ERR4816417 Other lineage4.9 None
ERR4816470 Other lineage3 None
ERR4817109 Other lineage3 None
ERR3275709 HR-TB lineage3 nl
ERR2229197 Sensitive lineage4 None
ERR2229198 MDR-TB lineage4.8 None
ERR4816569 Other lineage4.3.3 gb
ERR4816548 MDR-TB lineage4.5 None
ERR216965 HR-TB lineage4.9 None
ERR2229358 Other lineage4.8 None
ERR4816571 Other lineage1.1.2 None
ERR4816610 RR-TB lineage4.3.3 None
ERR4816734 Sensitive lineage4.9 None
ERR4817492 HR-TB lineage3.1 gb
ERR4816717 RR-TB lineage3.1.2.1 None
ERR4816702 RR-TB lineage4.6.2.2 None
ERR4816711 Sensitive lineage4.1.1 gb
ERR2229791 RR-TB lineage4.9 None
ERR4818710 Sensitive lineage4.9 None
ERR4816762 Other lineage4;lineage2 None
ERR4816782 Other lineage4.1.2.1 None
ERR2229801 Other lineage4 None
ERR4816833 Other lineage4.1.1.3 None
ERR2229804 Other lineage4 None
ERR2228838 RR-TB lineage4.8 None
ERR2228890 Other lineage4 None
ERR2228900 RR-TB lineage4.8 None
ERR4817667 HR-TB lineage4.8 None
ERR2229435 HR-TB lineage4.8 None
ERR4817434 Other lineage3 None
ERR4816800 Other lineage4.8 gb
ERR4816846 Other lineage6 gb
ERR4816852 Other lineage4.9 None
ERR2228810 RR-TB lineage4 None
ERR4816868 Other lineage4.4.1.1 None
ERR2228899 RR-TB lineage4.8 None
ERR4815815 Sensitive lineage4 None
ERR2228910 Other lineage4.8 None
ERR4817703 Other lineage1.1.1 None
ERR228175 Sensitive lineage3 None
ERR2513382 RR-TB lineage4.1.1.3 None
ERR4817915 RR-TB lineage4.9 None
ERR4817906 Other lineage4.8 None
ERR4817941 Other lineage4.8 gb
ERR4818003 Other lineage1.2.1.2.1 gb
ERR2510736 Other lineage4.1.2.1 None
SAMEA3450033 Other lineage4.8 None
ERR4818023 Other lineage4.1.2 gb
ERR2513405 Other lineage2.2.1 None
ERR2512504 Other lineage4.1.2.1 gb
ERR4818076 HR-TB lineage4.6.2.2 gb
ERR4818128 RR-TB lineage4.1.2.1 None
ERR4818831 Other lineage3 None
ERR4818272 Other lineage4.3.2 None
SAMEA3501063 RR-TB lineage4.8 None
ERR4818261 Other lineage1.1.2 None
ERR4819073 Other lineage4.1.2.1 None
ERR4819041 Sensitive lineage4.3.3 gb
ERR2513259 Other lineage3 None
ERR2513229 MDR-TB lineage2.2.1 None
ERR2512656 Sensitive lineage4.1.2.1 gb
ERR3276170 Other lineage4.1.2.1 nl
SRR5007161 RR-TB lineage4.1.1.3.1 None
ERR2503533 Other lineage4.1.2.1 fi
ERR4818561 HR-TB lineage4 None
ERR4818536 Other lineage4.9 None
ERR4818952 Other lineage3 None
SRR5007163 MDR-TB lineage4;lineage3 None
ERR4818624 Other lineage4.3.4.2.1 None
SRR5007165 MDR-TB lineage3 None
SRR5007170 RR-TB lineage4.9 None
SRR5007178 Pre-XDR-TB lineage4.1.1.3.1 None
SRR5007186 Other lineage4.6 None
SRR5007193 RR-TB lineage4.1.1.3.1 None
SRR5007204 Other lineage4.1.2.1 None
SRR5007167 RR-TB lineage4.1.1.3.1 None
SRR5007172 Sensitive lineage4.1.2.1 None
ERR4817555 RR-TB lineage3 None
SRR5007181 Sensitive lineage2.2.1 gb
ERR4817556 Sensitive lineage4.2.2.2 None
ERR2446154 Sensitive lineage4.4.1.1 nl
SRR5074294 Sensitive lineage4.4.1.1 None
ERR2513619 Other lineage4.8 gb
ERR4819096 Other lineage4.4.1.1 None
SRR5341365 Pre-XDR-TB lineage3 None
ERR4820290 Other lineage3 None
ERR4819242 HR-TB lineage4.6.2.2 None
ERR4820723 RR-TB lineage4.4.1.1 None
ERR4819131 Other lineage4 None
ERR4819154 Sensitive lineage4.1.1.3 None
SAMEA3501067 RR-TB lineage4.8 None
ERR4819175 Other lineage4.1.1.3 gb
ERR4819462 Other lineage4 None
ERR4819314 Other lineage1.1.1 None
ERR4819383 RR-TB lineage4.9 None
ERR2514181 Other lineage1.2.1.2.1 None
ERR4819357 Other lineage4.9 None
ERR3275615 Sensitive lineage4.4.1.1 nl
ERR2514215 Other lineage2.2.1 gb
ERR4819641 HR-TB lineage4.6.2.2 None
ERR4819546 HR-TB lineage3 None
ERR4819863 RR-TB lineage4.9 None
ERR4820798 Other lineage3.1.2.1 gb
ERR2514430 Other lineage4.1.1.3.1;lineage3.1.2 None
SRR5341267 Pre-XDR-TB lineage3 None
ERR2514702 Other lineage4.1.2.1 gb
ERR4819910 Other lineage4.9 None
ERR2515032 Other lineage3 None
SAMEA3501070 RR-TB lineage4.8 None
ERR2514896 Other lineage3 gb
ERR1023509 Other None
ERR4819933 Other lineage4.9 None
ERR2514926 Other lineage4.6.2.2 gb
SAMEA3501052 RR-TB lineage4.8 None
ERR4820130 Other lineage3 None
ERR4820193 Other lineage3 None
ERR4820030 Other lineage4.9 None
ERR2515230 Sensitive lineage4.8 None
ERR4821769 Other lineage4.1.2.1 None
SRR6046092 HR-TB lineage4.8 gb
SRR6045422 Other lineage4.3.1.1 None
SRR6046089 Other lineage4.1.2.1 None
ERR4821057 HR-TB lineage4 None
SRR6045445 Other lineage4.3.1.1 None
SAMEA3501046 RR-TB lineage4.8 None
SRR6045464 Other lineage4.1.1.3 None
ERR4821260 Other lineage5.1.1 gb
ERR4821119 Other lineage4.4.1.1 None
SRR6045485 Other lineage4.9 None
ERR4821143 RR-TB lineage4.9 None
SRR6045516 Other lineage3.1.1 None
SRR6045537 Pre-XDR-TB lineage2.2.1 None
SRR6045553 RR-TB lineage4.9 None
ERR4821172 RR-TB lineage4.9 None
SRR6045496 Other lineage6.1.3 None
SRR6046117 RR-TB lineage4.9 None
ERR4821154 Other lineage2.2.1 gb
ERR4822004 Other lineage1.1.1.1 gb
ERR4821272 RR-TB lineage4.1.2.1 None
ERR4821288 Other lineage4.7 None
ERR4821318 HR-TB lineage4.6.2.2 gb
ERR4822138 Other lineage4.1.2.1 None
ERR4822051 Sensitive lineage4.3.3 None
ERR4821409 Other lineage4.8 None
ERR4822149 Sensitive lineage4.9 None
ERR4821725 Other lineage4.8.2 gb
ERR4822150 Other lineage4.8 gb
ERR4821519 Other lineage3 gb
ERR4821616 Other lineage1.1.3.1 None
ERR4821573 HR-TB lineage1.2.1.2.1 gb
SRR5709926 MDR-TB lineage2.2.1 None
SRR6045599 Other lineage4.8 None
SRR6045565 Other lineage4.6.2.2 None
SRR6046113 Other lineage4.1.1.3 None
SRR6045591 Other lineage4.1.2.1 None
SRR6045613 Other lineage3.1.3 None
SRR6045600 Other lineage3.1.2 gb
SRR6045603 RR-TB lineage4.1.1.3 None
SRR6045664 Other lineage4.2.1 None
SRR6046135 Other lineage4.1.2.1 None
SRR6045616 Other lineage4.4.1.2 gb
SRR6045621 Other lineage4.1.1.3 None
SRR6045726 Other lineage3 None
SRR6045705 Other lineage4.9 None
SRR5818572 Sensitive lineage4.2.2.2 None
SRR6045642 Other lineage3.1.2.2 None
SRR6045683 Other lineage3.1.2 None
SRR6046141 Other lineage4.9 None
SRR6046210 Other lineage4 None
SRR6045743 Other lineage3 None
SRR6045749 Other lineage4.1.1 gb
SRR5818586 RR-TB lineage4.2.2.2 None
SRR5818647 RR-TB lineage4.3.4.2.1 None
SRR6045778 Other lineage3.1 None
SRR5818622 Sensitive lineage4.2.2.2 None
SRR6045805 Other lineage4.3.1.1 None
SRR5818624 Sensitive lineage3 None
SRR5818694 RR-TB lineage4.2.2.2;lineage3 None
SRR5818667 Sensitive lineage4.4.1.1 dj
SRR5818672 Other lineage1.2.2.2 None
SRR6045832 HR-TB lineage4.9 None
SRR5818690 Other lineage4.2.2.2 None
SRR5818669 Sensitive lineage1.2.2.2 None
SRR6045843 Other lineage4.2.2.2 None
SRR6045894 Other lineage4.8 None
SRR6045849 Other lineage4.4.1.1 None
SRR6045876 Other lineage3 gb
SRR6044784 MDR-TB lineage3 None
SRR6044857 Other lineage4.8.1 gb
SRR6044838 Other lineage4.9 None
SRR6044841 Other lineage4.9 None
SRR6045909 Other lineage4.8 None
SRR6044876 Sensitive lineage4 None
SRR6044873 Other lineage4.1.1.3.1 None
SRR6044872 Sensitive lineage3.1.2.1 None
SRR6045925 Other lineage4.2 None
SRR6045928 Other lineage4.9 None
SRR6044936 Other lineage4 None
SRR6044904 Other lineage3 None
SRR6045944 Other lineage4.1.2.1 None
SRR6044945 HR-TB lineage4.1.2.1 gb
SRR6045957 Other lineage4.9 None
SRR6044952 RR-TB lineage4.9 None
SRR6044983 Other lineage3.1.1 None
SRR6044958 Other lineage4.4.1.1 None
SRR6044993 Other lineage3 None
SRR6045002 MDR-TB lineage4.9 None
SRR6045017 Other lineage3.1.2.2 None
SRR6045952 HR-TB None
SRR6045178 Other lineage3 None
SRR6045056 Other lineage2.2.1 gb
SRR6046159 Other lineage4.8.2 None
SRR6045125 Other lineage1.1.2 None
SRR6045999 Sensitive lineage4.8.2 gb
SRR6045158 Other lineage4.9 None
SRR6045159 Other lineage3.1.1 None
SRR6046177 Other lineage3.1.2 None
SRR6046020 Other lineage3 None
SRR6045024 Other lineage4.1.1.2 None
SRR6045986 Other lineage3 None
SRR6045119 Other lineage3 gb
SRR6045989 Other lineage2.2.1 gb
SRR6045138 Other lineage3.1.1 None
SRR6045263 Sensitive lineage4.9 None
SRR6045191 Sensitive lineage4.9 None
SRR6045243 Sensitive lineage4.1.1 gb
SRR6045175 Other lineage3.1.2.2 None
SRR6046208 Other lineage4 None
SRR6045248 Other lineage3.1.1 None
SRR6045365 Other lineage3 gb
SRR6045267 RR-TB lineage4 None
SRR6045321 Other lineage1.1.3.1 None
SRR6045288 Other lineage3 gb
SRR6045289 Other None
SRR6045295 Other lineage4.7 None
SRR6045312 Other lineage1.1.3.3 None
SRR6045359 Sensitive lineage4.9 None
SRR6045376 HR-TB lineage4.1.2.1 gb
SRR6046064 Other lineage3 gb
SRR6045384 Other lineage4.1.2 None
SRR6045424 Other lineage1.1.2 None
SRR6046246 Other lineage3 None
SRR6046219 Other lineage4.8;lineage3 gb
SRR6046250 Other lineage4.9 None
SRR6046275 Other lineage3.1.1 None
SRR6046281 Other lineage4.9 None
SRR6046273 Other lineage3.1.2 None
SRR6046359 Other lineage4.7 None
SRR6046291 Other lineage3 None
ERR2851354 RR-TB lineage4.9 None
SRR6046385 Other lineage4.9 None
SRR6046376 Other lineage3 None
SRR6046343 Other lineage2.2.1 None
ERR2851356 Sensitive lineage4.9 None
SRR6046447 Sensitive lineage4.8 gb
ERR2851359 Other lineage4.9 None
ERR2179840 Sensitive lineage3 cn
ERR4828879 MDR-TB lineage3 None
ERR4830549 MDR-TB lineage4.1.1.3 None
SRR6046440 Other lineage3.1.2.2 None
SRR6046442 Other lineage3 None
SRR6046541 Other lineage4.9 None
SRR6046457 Other lineage3 gb
SRR6046484 Other lineage1.2.2.2 None
SRR6046482 HR-TB None
SRR6046463 Other lineage4.4.1.1 None
SRR6046508 Sensitive lineage3.1.2.2 gb
SRR6046521 Other lineage4.4.1.1 None
SRR6046729 Other None
SRR6046612 Other lineage1.1.1.1 None
SRR6046641 Other lineage4.8 None
SRR6046646 Other lineage4.7 gb
SRR6046534 Other lineage1.1.2 None
SRR6046607 Other lineage3 None
SRR6046616 Other lineage4.3.1.1 None
SRR6046655 Other lineage4.1.2.1 None
SRR6046668 Sensitive lineage1.1.2 gb
SRR6046679 Other lineage3 gb
SRR6046701 Other lineage3.1.2.2 None
SRR6046733 Pre-XDR-TB lineage2.2.1 None
SRR6046737 Other lineage4.9 None
SRR6046766 Other lineage3.1.1 None
SRR6046839 Other lineage4.9 None
SRR6046802 Other lineage4 None
SRR6046818 Other lineage4.2.1 gb
SRR6046815 Other lineage3 None
SRR6046848 Other lineage4.6.5 None
SRR6046852 MDR-TB lineage3 None
SRR6046824 HR-TB None
SRR6152980 HR-TB lineage4.8 ca
SRR6397359 Other lineage4.3.2 ca
SRR6152899 MDR-TB lineage2.2.2 ca
SRR6367397 Other lineage4.1.2.1 None
SRR6397733 Other lineage4.4.1.2 None
ERR3077969 Other La1.3 None
SRR6153150 Other lineage3.1.1 None
SRR6153166 Other lineage1.2.1.2.1 ca
SRR6397815 Other lineage4.4.1.1 None
SRR6398019 Sensitive lineage4.1.2 ca
ERR502470 RR-TB lineage4.9 None
ERR2886463 Sensitive lineage2.2.1 None
ERR323037 HR-TB lineage4 None
ERR502473 Pre-XDR-TB lineage4.9 None
ERR502479 RR-TB lineage4.9 None
ERR502474 Pre-XDR-TB lineage4.9 None
ERR502478 RR-TB lineage4.9 None
ERR485006 HR-TB lineage4.9 None
SRR6785281 Other lineage4.2.1.1 None
SRR6982141 RR-TB lineage4.3.3 None
ERR502481 Pre-XDR-TB lineage4.9 None
ERR4972588 MDR-TB lineage4.3.2 None
ERR4872322 Pre-XDR-TB lineage2.2.1 None
SRR6896545 Other lineage4.9 None
SRR6832644 Other lineage4.3.3 None
ERR5087846 Other La1.8.1 None
SRR6982389 Other lineage4.1.2;lineage3.1 None
ERR502517 MDR-TB lineage5.1.1 None
ERR2984800 Pre-XDR-TB lineage4.3.4.1 None
ERR3275941 RR-TB lineage4.3 nl
ERR3275190 Other lineage3 nl
ERR5087596 Other La1.8.1 None
SRR7131031 Other lineage4.2.2.2 None
ERR5311077 RR-TB La1.8.1 None
ERR5311092 Other La1.8.1 None
SRR9971246 MDR-TB lineage4.1.1.3 None
SRR7131004 Other lineage4.6.2.2 None
SRR7131147 Other lineage4.1.2.1 None
SRR9971256 MDR-TB lineage2.2.1 None
SRR7131068 Other lineage4.8 None
SRR7131097 Sensitive lineage2.2.1 None
SRR7131075 Other lineage4.8 None
SRR7131098 MDR-TB lineage4.3.3 None
SRR7131123 Other lineage4.8 None
SRR7131145 Other lineage4.1.2.1 None
SRR9971270 RR-TB lineage2.2.1 None
SRR7131152 MDR-TB lineage2.2.1 None
SRR7131161 Other lineage4.8 None
SRR7131174 Other lineage4 None
SRR7131182 Other lineage4.1.2.1 None
SRR7131195 Other lineage2.2.1 None
SRR7131216 Other lineage4.1.2.1 None
SRR7131229 Other lineage4.1.2.1 None
SRR7131230 HR-TB lineage4.3.4.2 None
SRR7131287 Other lineage2.2.1.1 None
SRR7496523 Other lineage4.7 None
SRR7496471 Sensitive None
SRR7645899 RR-TB lineage2.2.1 None
SRR9971372 MDR-TB lineage4.1.1 None
SRR7535047 RR-TB lineage4.6.1.1 None
SRR8600107 Other La1.8.1 None
SRR9971333 MDR-TB lineage4.1.1.3 None
SRR9971336 XDR-TB lineage4.3.3 None
SRR7585435 Other lineage4.9 None
SRR7645928 RR-TB lineage4.7 None
SRR9971017 HR-TB lineage2.2.1 None
SRR7645901 MDR-TB lineage2.2.1 None
SRR7645927 Other lineage4.8 None
SRR7645906 Other lineage2.2.1 None
SRR7645971 Other lineage2.2.1 None
SRR9971032 RR-TB lineage2.2.1 None
SRR8600288 Other La1.8.1 None
SRR7645972 MDR-TB lineage4.2.1 None