Rv0668 - c.1207_1208delTCinsAG
Drug resistance types
15 Sensitive
9 RR-TB
79 HR-TB
20 MDR-TB
8 Pre-XDR-TB
1 XDR-TB
64 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4 | 7 |
| lineage4.9;La1.3 | 1 |
| La1.2 | 2 |
| La1.3 | 3 |
| 72 | |
| lineage2.2.1 | 15 |
| lineage4.1.2.1 | 13 |
| lineage4.9 | 33 |
| lineage4.1.2.1.1 | 1 |
| lineage4.5 | 1 |
| lineage4.3.2 | 1 |
| lineage5.2 | 2 |
| lineage4.6.2.2 | 2 |
| lineage3 | 7 |
| lineage4.3.3 | 1 |
| lineage2 | 1 |
| lineage4.3.2.1 | 1 |
| lineage4.4.1.1.1 | 1 |
| La3 | 1 |
| lineage4.4.1.1 | 1 |
| lineage1.2.1.2 | 1 |
| lineage4.3.4.1 | 1 |
| La1.7.1 | 3 |
| La1.8.1 | 7 |
| lineage4.1 | 2 |
| lineage3;lineage2.1 | 1 |
| lineage1.1.3.2 | 1 |
| lineage2.2 | 2 |
| lineage4.3 | 1 |
| lineage4.1.1.3 | 2 |
| lineage4.1.1 | 1 |
| lineage4.3.4.2.1 | 1 |
| lineage1.1 | 1 |
| lineage3.1 | 2 |
| lineage5.1.1 | 1 |
| lineage4.7 | 1 |
| lineage4.8 | 1 |
| lineage4.4.1.2 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 196 |
Geographic prevalence
Country level data for this variant is available for 7 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR4769442 | HR-TB | lineage4 | None | ERR4596910 | Sensitive | lineage4 | None | ERR4769550 | Other | lineage4.9;La1.3 | None | ERR4769497 | HR-TB | La1.2 | None | ERR4769506 | Sensitive | La1.3 | None | ERR4769552 | Other | La1.3 | None | ERR4796577 | MDR-TB | None | ERR4796472 | Pre-XDR-TB | lineage2.2.1 | None | ERR4769555 | Other | La1.3 | None | ERR4798406 | HR-TB | None | ERR6358951 | HR-TB | lineage4 | None | ERR4811493 | HR-TB | None | ERR5917710 | Other | lineage4.1.2.1 | None | ERR6198317 | Other | La1.2 | None | ERR6358837 | HR-TB | None | ERR5865993 | MDR-TB | lineage2.2.1 | None | ERR5917985 | MDR-TB | lineage2.2.1 | None | ERR702404 | HR-TB | None | ERR6359070 | Other | lineage4.9 | None | ERR6359069 | Other | lineage4.9 | None | ERR6359074 | HR-TB | lineage4.9 | None | ERR736837 | Other | lineage4.9 | None | ERR760733 | MDR-TB | lineage4.1.2.1.1 | None | ERR752229 | Other | lineage4.5 | None | ERR772255 | MDR-TB | lineage4.3.2 | None | ERR8976043 | HR-TB | None | ERR9119500 | MDR-TB | lineage5.2 | None | ERR9119525 | MDR-TB | lineage4.6.2.2 | None | ERR9786076 | Sensitive | lineage3 | None | SRR10315551 | Sensitive | lineage2.2.1 | None | ERR9786656 | Sensitive | lineage4.1.2.1 | None | ERR9992879 | XDR-TB | lineage4.3.3 | None | SRR069989 | HR-TB | lineage2 | None | SRR11349147 | RR-TB | lineage4.3.2.1 | None | SRR1162740 | Other | lineage4.1.2.1 | None | SRR11349145 | Pre-XDR-TB | lineage4.4.1.1.1 | None | SRR1162864 | HR-TB | lineage4.1.2.1 | None | SRR1165506 | Other | lineage4.1.2.1 | None | SRR1163221 | HR-TB | lineage4.1.2.1 | None | SRR1165423 | Other | lineage4.1.2.1 | None | SRR1167384 | Other | lineage4 | None | SRR1167055 | Other | lineage4.1.2.1 | None | SRR1165584 | Other | lineage4.1.2.1 | None | SRR1173385 | Sensitive | lineage4.9 | None | SRR1169249 | Other | La3 | None | SRR1172885 | HR-TB | lineage4.9 | None | SRR1169306 | Other | None | SRR1173453 | Other | lineage4.4.1.1 | None | SRR11972367 | Sensitive | lineage2.2.1 | None | SRR1173515 | HR-TB | lineage4.9 | None | SRR1196545 | HR-TB | lineage4.9 | None | SRR1175052 | HR-TB | lineage4.9 | None | SRR1184308 | Sensitive | lineage4.9 | None | SRR12006550 | Other | lineage1.2.1.2 | None | SRR11972425 | Pre-XDR-TB | lineage2.2.1 | None | SRR13861251 | RR-TB | lineage4.9 | None | SRR13583478 | HR-TB | lineage4.3.4.1 | None | SRR13837544 | Sensitive | lineage4.9 | None | SRR13861381 | MDR-TB | lineage4.9 | None | SRR13861376 | Other | lineage4.9 | None | SRR1792478 | HR-TB | La1.7.1 | None | SRR13861571 | RR-TB | lineage4.9 | None | SRR13861663 | Sensitive | lineage4.9 | None | SRR1791696 | Other | La1.8.1 | None | SRR1640750 | HR-TB | None | SRR5709967 | MDR-TB | lineage2.2.1 | None | SRR21469201 | Other | La1.7.1 | None | SRR21469202 | Other | La1.7.1 | None | SRR21240161 | Sensitive | lineage4.1.2.1 | None | SRR6325445 | HR-TB | None | SRR3675464 | HR-TB | lineage4.1 | None | SRR3675482 | HR-TB | None | ERR1035239 | HR-TB | None | ERR158583 | HR-TB | None | ERR161033 | HR-TB | None | SRR3675486 | HR-TB | None | ERR4814536 | MDR-TB | lineage3;lineage2.1 | None | ERR181750 | Sensitive | lineage1.1.3.2 | None | SRR3675502 | Other | None | SRR3601585 | Pre-XDR-TB | lineage2.2 | None | SRR3618864 | Pre-XDR-TB | lineage2.2.1 | None | SRR3619841 | Pre-XDR-TB | lineage2.2.1 | None | SRR3619764 | Pre-XDR-TB | lineage2.2 | None | ERR1750907 | RR-TB | None | ERR4815471 | Other | lineage4.9 | None | SRR3675383 | HR-TB | None | SRR3675234 | Other | None | ERR176568 | Other | lineage4.3 | None | ERR176643 | HR-TB | None | SRR3675312 | HR-TB | lineage4 | None | ERR4816551 | HR-TB | lineage4.1.1.3 | None | ERR176751 | HR-TB | None | ERR4816964 | Other | lineage4.9 | None | SRR3675550 | Other | None | ERR212033 | HR-TB | None | ERR4816322 | Other | lineage4.9 | None | ERR212121 | HR-TB | None | SRR3675545 | HR-TB | None | SRR3675558 | HR-TB | None | ERR3275190 | Other | lineage3 | nl | ERR4816852 | Other | lineage4.9 | None | ERR4818710 | Sensitive | lineage4.9 | None | ERR4816656 | HR-TB | None | ERR2446566 | Other | lineage4.1 | None | ERR1035162 | Other | None | ERR2513229 | MDR-TB | lineage2.2.1 | None | ERR3275196 | Other | lineage2.2.1 | nl | ERR2229143 | Other | lineage4.1.1 | None | ERR4818929 | HR-TB | None | ERR4819357 | Other | lineage4.9 | None | ERR3275220 | Other | lineage3 | nl | ERR4818536 | Other | lineage4.9 | None | SRR5341418 | Other | None | SRR5341456 | Other | None | ERR4819462 | Other | lineage4 | None | ERR2446509 | Other | lineage3 | nl | ERR4819933 | Other | lineage4.9 | None | SRR5341330 | HR-TB | None | ERR2693238 | HR-TB | lineage4.9 | None | ERR2446563 | Other | lineage2.2.1 | nl | SAMN02414850 | Other | lineage4.1.2.1 | None | ERR278594 | HR-TB | None | ERR4821053 | Other | lineage3 | None | ERR2693239 | HR-TB | None | ERR2693254 | Other | None | ERR2446144 | Other | lineage3 | nl | ERR2693232 | Other | lineage4.9 | None | SRR5818647 | RR-TB | lineage4.3.4.2.1 | None | SRR6045952 | HR-TB | None | SRR6044890 | Other | lineage4.9 | None | SRR6045191 | Sensitive | lineage4.9 | None | SRR6045002 | MDR-TB | lineage4.9 | None | SRR6046299 | HR-TB | None | SRR6046253 | HR-TB | lineage4.9 | None | SRR6325442 | HR-TB | None | SRR6046514 | HR-TB | None | SRR6325444 | HR-TB | None | ERR2517528 | Other | lineage3 | nl | SRR6046492 | Other | None | SRR6325448 | HR-TB | None | SRR6325447 | HR-TB | None | ERR3077978 | Other | lineage1.1 | None | SRR6046824 | HR-TB | None | SRR6458421 | MDR-TB | lineage2.2.1 | None | SRR6397654 | HR-TB | lineage4.1.2.1 | None | ERR323034 | HR-TB | lineage3.1 | None | SRR6832249 | Other | lineage2.2.1 | None | ERR4831117 | HR-TB | None | ERR4872094 | MDR-TB | lineage5.2 | None | ERR4872119 | MDR-TB | lineage4.6.2.2 | None | ERR294248 | HR-TB | None | SRR6832787 | RR-TB | lineage2.2.1 | None | ERR323036 | HR-TB | None | ERR294266 | HR-TB | None | ERR5311090 | HR-TB | None | ERR502517 | MDR-TB | lineage5.1.1 | None | ERR502889 | Other | None | ERR5311099 | HR-TB | None | ERR5311077 | RR-TB | La1.8.1 | None | ERR5311081 | HR-TB | None | SRR7496471 | Sensitive | None | ERR323038 | HR-TB | None | SRR7496523 | Other | lineage4.7 | None | SRR9971122 | MDR-TB | lineage4.8 | None | SRR9971333 | MDR-TB | lineage4.1.1.3 | None | ERR323041 | HR-TB | None | ERR323063 | HR-TB | None | ERR323054 | HR-TB | lineage3.1 | None | ERR323048 | Pre-XDR-TB | lineage4.9 | None | ERR323055 | HR-TB | None | ERR3283024 | Other | None | ERR1023295 | HR-TB | lineage4.1.2.1 | None | ERR126597 | MDR-TB | lineage4.4.1.2 | None | ERR133986 | HR-TB | None | ERR3283017 | HR-TB | None | ERR067681 | HR-TB | None | ERR3283055 | HR-TB | None | ERR3283048 | HR-TB | lineage4.9 | None | ERR3468488 | RR-TB | La1.8.1 | None | ERR3439432 | Other | None | ERR3445504 | HR-TB | None | ERR3797016 | HR-TB | None | ERR3468544 | HR-TB | None | ERR3468613 | RR-TB | La1.8.1 | None | ERR3797017 | Other | None | ERR3797014 | Other | None | ERR3797023 | HR-TB | La1.8.1 | None | ERR4188222 | MDR-TB | La1.8.1 | None | ERR3797061 | Other | None | ERR3797082 | Other | lineage4.9 | None | ERR4188213 | HR-TB | La1.8.1 | None | ERR3797046 | HR-TB | None | ERR3797044 | Other | None | ERR3797083 | HR-TB | None | ERR403298 | HR-TB | lineage4 | None | ERR4188350 | HR-TB | None |
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