ERR970449
|
RR-TB
|
lineage4.1.1.3
|
None
|
ERR323064
|
MDR-TB
|
La3;M.canetti;lineage2.1;lineage4.9
|
None
|
ERR161033
|
MDR-TB
|
M.canetti;lineage2.1;lineage4.9
|
None
|
SRR6325447
|
MDR-TB
|
lineage2.1;lineage4.1.1.1;lineage6.3
|
None
|
SRR6458421
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR212121
|
HR-TB
|
lineage4.9;lineage6.3
|
None
|
ERR1023295
|
MDR-TB
|
M.canetti;lineage2.1;lineage4.1.2.1
|
None
|
SRR3675515
|
HR-TB
|
M.canetti;lineage2.1;lineage4.9
|
None
|
SRR3675464
|
HR-TB
|
lineage2.1;lineage4.9;lineage6.3;lineage8
|
None
|
SRR6325444
|
MDR-TB
|
M.canetti;lineage2.1;lineage6.3
|
None
|
ERR760733
|
MDR-TB
|
lineage4.1.2.1.1
|
None
|
SRR3675518
|
MDR-TB
|
M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3
|
None
|
ERR978747
|
Other
|
lineage4.8
|
None
|
ERR5311099
|
MDR-TB
|
M.canetti;lineage2.1;lineage4.9
|
None
|
ERR176766
|
HR-TB
|
lineage2.1;lineage4.9
|
None
|
ERR5311102
|
MDR-TB
|
M.canetti;lineage2.1;lineage4.9
|
None
|
ERR502470
|
RR-TB
|
lineage4.9
|
None
|
ERR9992879
|
XDR-TB
|
lineage4.3.3
|
None
|
ERR323033
|
MDR-TB
|
La3;M.canetti;lineage2.1;lineage4.9
|
None
|
ERR867545
|
Other
|
lineage4.9
|
None
|
ERR323041
|
HR-TB
|
M.canetti;lineage2.1
|
None
|
SAMEA3501067
|
RR-TB
|
lineage4.8
|
None
|
ERR978757
|
RR-TB
|
lineage4.8
|
None
|
SRR6325442
|
HR-TB
|
lineage2.1;lineage4.1.1.1;lineage6.3
|
None
|
SRR9971122
|
MDR-TB
|
lineage4.8
|
None
|
ERR126600
|
HR-TB
|
La3;M.canetti;lineage2.1;lineage4.9;lineage6.3
|
None
|
SRR1175491
|
MDR-TB
|
lineage4.3.4.1
|
None
|
ERR323047
|
HR-TB
|
La3;M.canetti;lineage2.1;lineage4.9
|
None
|
ERR2513405
|
Other
|
lineage2.2.1
|
None
|
ERR3275196
|
Other
|
lineage2.2.1
|
nl
|
ERR323060
|
HR-TB
|
La3;M.canetti;lineage2.1;lineage4.9
|
None
|
SRR6045952
|
HR-TB
|
M.canetti;lineage2.1;lineage4.9;lineage6.3
|
None
|
SRR11349147
|
RR-TB
|
lineage4.3.2.1
|
None
|
SRR1175472
|
RR-TB
|
lineage4.3.4.1
|
None
|
ERR323058
|
HR-TB
|
La3;M.canetti;lineage2.1;lineage4.9
|
None
|
ERR1063856
|
HR-TB
|
M.canetti;lineage4.9;lineage9
|
None
|
SRR21469200
|
Other
|
La1.7.1
|
None
|
ERR4872102
|
MDR-TB
|
lineage4.6.4
|
None
|
ERR5311081
|
MDR-TB
|
M.canetti;lineage2.1;lineage4.9
|
None
|
ERR772255
|
MDR-TB
|
lineage2.1;lineage4.3.2
|
None
|
ERR8665994
|
Other
|
lineage4.9
|
None
|
ERR978756
|
Other
|
lineage4.8
|
None
|
ERR3797083
|
RR-TB
|
lineage4.9
|
None
|
ERR5311101
|
MDR-TB
|
M.canetti;lineage2.1;lineage4.9
|
None
|
ERR124642
|
MDR-TB
|
M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3
|
None
|
ERR4872322
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR978752
|
Other
|
lineage4.8
|
None
|
SRR6325445
|
HR-TB
|
M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3
|
None
|
SRR1181020
|
Other
|
lineage2.2.1
|
None
|
SRR10303325
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR1873396
|
Pre-XDR-TB
|
M.canetti;lineage2.2
|
None
|
SRR3675486
|
HR-TB
|
M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3
|
None
|
ERR978750_ERR978752_ERR978751
|
RR-TB
|
lineage4.8
|
None
|
ERR9786526
|
Other
|
lineage4.1;lineage4.8
|
None
|
SRR6982141
|
Other
|
lineage4.3.3
|
None
|
ERR5311082
|
MDR-TB
|
M.canetti;lineage2.1;lineage4.1.4;lineage4.9
|
None
|
ERR278594
|
HR-TB
|
lineage2.1;lineage4.9
|
None
|
SRR1062920
|
MDR-TB
|
lineage4.3.3;lineage4.8
|
None
|
SRR1173767
|
MDR-TB
|
lineage4.4.1.1
|
None
|
ERR176643
|
Other
|
La3;lineage4.9
|
None
|
SRR3675450
|
HR-TB
|
La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3
|
None
|
SRR3619841
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR323055
|
MDR-TB
|
La3;M.canetti;lineage2.1;lineage4.9
|
None
|
ERR5311096
|
HR-TB
|
M.canetti;lineage2.1;lineage4.9;lineage6.3
|
None
|
ERR037504
|
Other
|
lineage4.9.1
|
None
|
ERR6358991
|
HR-TB
|
lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3
|
None
|
SRR16278274
|
Other
|
La1.4
|
None
|
SRR1510066
|
RR-TB
|
lineage1.2.1.2.1
|
None
|
ERR8976043
|
HR-TB
|
lineage2.1;lineage2.2;lineage6.3
|
None
|
SRR3675320
|
MDR-TB
|
M.canetti;lineage2.1;lineage4.3.1;lineage4.9
|
None
|
ERR3077978
|
RR-TB
|
lineage1.1
|
None
|
ERR323038
|
HR-TB
|
La3;M.canetti;lineage2.1;lineage4.9
|
None
|
SRR1165584
|
Other
|
lineage4.1.2.1
|
None
|
SAMEA3501052
|
RR-TB
|
lineage4.8
|
None
|
ERR5917985
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR9786525
|
Other
|
lineage4.1;lineage4.8
|
None
|
SRR7240492
|
HR-TB
|
La1.7.1
|
None
|
SRR1175474
|
Other
|
lineage4.9
|
None
|
SRR12708406
|
HR-TB
|
lineage2.2.1;lineage4.9
|
None
|
SRR1640750
|
Other
|
|
None
|
ERR867544
|
Other
|
lineage4.9
|
None
|
ERR3797016
|
HR-TB
|
M.canetti;lineage2.1;lineage4.9
|
None
|
ERR038268
|
HR-TB
|
La3;M.canetti;lineage4.8;lineage4.9
|
None
|
ERR3797023
|
HR-TB
|
La1.8.1
|
None
|
SRR1049674
|
HR-TB
|
lineage2.2.1
|
None
|
ERR176658
|
HR-TB
|
M.canetti;lineage2.1;lineage4.9
|
None
|
SRR3675322
|
HR-TB
|
M.canetti;lineage2.1;lineage4.1.4;lineage4.9
|
None
|
SRR3675508
|
Other
|
lineage2.1;lineage4.9;lineage6.3
|
None
|
SRR1049675
|
HR-TB
|
lineage2.2.1
|
None
|
SRR1165506
|
Other
|
lineage4.1.2.1
|
None
|
SRR1049676
|
MDR-TB
|
lineage4.3.3;lineage4.8
|
None
|
SRR3619764
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR323034
|
MDR-TB
|
La3;M.canetti;lineage2.1;lineage3.1
|
None
|
SRR6824501
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR1167055
|
Other
|
lineage4.1.2.1
|
None
|
SRR1165628
|
Other
|
La3;lineage4.9
|
None
|
ERR323040
|
HR-TB
|
La3;M.canetti;lineage2.1;lineage4.9;lineage6.3
|
None
|
SRR3601585
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR978761_ERR978762_ERR978760
|
RR-TB
|
lineage4.8
|
None
|
ERR4769433
|
RR-TB
|
lineage4.9
|
None
|
SRR1169306
|
Other
|
La3;lineage4.9
|
None
|
ERR978755_ERR978756_ERR978754_ERR978757
|
RR-TB
|
lineage4.8
|
None
|
ERR5311078
|
MDR-TB
|
M.canetti;lineage2.1;lineage4.9;lineage6.3
|
None
|
ERR3468613
|
Other
|
La1.8.1
|
None
|
ERR5917710
|
Other
|
lineage4.1.2.1
|
None
|
SRR1791696
|
Other
|
La1.8.1
|
None
|
SRR3675561
|
Other
|
M.canetti;lineage2.1;lineage4.9
|
None
|
ERR2229143
|
RR-TB
|
lineage4.9
|
None
|
ERR126618
|
MDR-TB
|
La3;M.canetti;lineage2.1;lineage4.9;lineage6.3
|
None
|
ERR5311077
|
Other
|
La1.8.1
|
None
|
ERR3468488
|
Other
|
La1.8.1
|
None
|
ERR176751
|
Other
|
lineage4.9
|
None
|
ERR978734_ERR978733_ERR978735
|
RR-TB
|
lineage4.8
|
None
|
SRR1165423
|
RR-TB
|
lineage4.1.2.1
|
None
|
SAMN02414850
|
Other
|
lineage4.1.2.1
|
None
|
SRR13861332
|
Other
|
lineage4.9
|
None
|
ERR5311090
|
MDR-TB
|
M.canetti;lineage2.1;lineage4.9
|
None
|
SRR21469202
|
Other
|
La1.7.1
|
None
|
ERR1873393
|
HR-TB
|
M.canetti;lineage2.1;lineage4.9
|
None
|
ERR323054
|
MDR-TB
|
La3;M.canetti;lineage3.1
|
None
|
ERR386953
|
HR-TB
|
M.canetti;lineage2.1;lineage4.9
|
None
|
SAMEA3501070
|
RR-TB
|
lineage4.8
|
None
|
ERR9786843
|
Other
|
|
None
|
SRR6325448
|
HR-TB
|
M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3
|
None
|
SRR9971333
|
MDR-TB
|
lineage4.1.1.3
|
None
|
ERR473314
|
HR-TB
|
M.canetti;lineage2.1;lineage4.9
|
None
|
ERR124652
|
HR-TB
|
La3;M.canetti;lineage2.1;lineage4.9
|
None
|
SRR1162864
|
Other
|
lineage4.1.2.1
|
None
|
SRR1167384
|
Other
|
La3;lineage4.9
|
None
|
SRR3675444
|
HR-TB
|
M.canetti;lineage2.1;lineage4.9
|
None
|
ERR6358837
|
HR-TB
|
La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3
|
None
|
ERR323044
|
HR-TB
|
lineage4.3.4.2.1
|
None
|
ERR867543
|
Sensitive
|
lineage4.6.2.2
|
None
|
ERR978751
|
Other
|
lineage4.8
|
None
|
SAMEA3501063
|
RR-TB
|
lineage4.8
|
None
|
SRR10430377
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR3468607
|
Other
|
lineage4.9
|
None
|
ERR11252599
|
Other
|
M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3
|
None
|
ERR1035239
|
MDR-TB
|
M.canetti;lineage2.1;lineage4.9
|
None
|
ERR323063
|
HR-TB
|
La3;M.canetti;lineage2.1;lineage4.9
|
None
|
SRR3675507
|
Other
|
lineage4.9
|
None
|
ERR978746_ERR978747_ERR978748
|
RR-TB
|
lineage4.8
|
None
|
ERR176568
|
HR-TB
|
La3;lineage2.1;lineage4.9
|
None
|
ERR2693239
|
RR-TB
|
M.canetti;lineage2.1;lineage4
|
None
|
ERR036207
|
Other
|
lineage4.3;lineage4.9
|
None
|
ERR294248
|
MDR-TB
|
lineage2.1;lineage4.9
|
None
|
SRR3675482
|
Other
|
lineage4.9
|
None
|
ERR9119508
|
MDR-TB
|
lineage4.6.4
|
None
|
ERR124651
|
MDR-TB
|
La3;M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3
|
None
|
SRR11972425
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR6982239
|
Sensitive
|
lineage4.1.1.3
|
None
|
SRR3618864
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR2693228
|
RR-TB
|
lineage4.9
|
None
|
ERR126608
|
HR-TB
|
La3;M.canetti;lineage2.1;lineage4.9
|
None
|
ERR4596904
|
MDR-TB
|
lineage3.1.1
|
None
|
ERR736839
|
HR-TB
|
M.canetti;lineage4.9
|
None
|
ERR978762
|
Other
|
lineage4.8
|
None
|
SAMEA3501065
|
RR-TB
|
lineage4.8
|
None
|