EBG00000313339 - n.2340A>G
Drug resistance types
24 Sensitive
48 RR-TB
38 HR-TB
53 MDR-TB
25 Pre-XDR-TB
2 XDR-TB
83 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage3 | 15 |
| lineage2.2.1 | 37 |
| lineage4.3.4 | 1 |
| lineage2.2 | 5 |
| 32 | |
| lineage4 | 11 |
| lineage4.3.4.2.1 | 6 |
| lineage4.9 | 45 |
| lineage4.8 | 9 |
| lineage4.6.2.2 | 3 |
| lineage4.1.2 | 3 |
| lineage4.1.2.1 | 11 |
| lineage3.1.2.1 | 1 |
| lineage4.6.1.2 | 5 |
| lineage2.2.2 | 3 |
| lineage4.3.4.2 | 1 |
| lineage4.1 | 2 |
| lineage4.6 | 1 |
| lineage1.1.2 | 1 |
| lineage1.1.1 | 1 |
| lineage3.1.2 | 1 |
| lineage4.2.2.2 | 1 |
| lineage4.3.3 | 4 |
| La1.3 | 1 |
| lineage4.3.2 | 1 |
| lineage4.2.1.1 | 1 |
| La1.8.1 | 13 |
| lineage5.1.1 | 1 |
| lineage4.3 | 1 |
| lineage4.1.1.3 | 4 |
| lineage4.6.1.1 | 3 |
| lineage4.3.2.1 | 2 |
| lineage4.2.1 | 9 |
| lineage4.7 | 2 |
| lineage4.3.4.1 | 2 |
| La1.2 | 3 |
| lineage1.1.1.1 | 2 |
| lineage4.4.2 | 3 |
| lineage4.9.1 | 1 |
| lineage4.4.1.2 | 1 |
| lineage6.2.3;lineage1.1.2 | 1 |
| lineage4.9;La1.8.1 | 1 |
| lineage4.5 | 1 |
| lineage4.6.5 | 1 |
| lineage4.1.1.2 | 1 |
| lineage6.3.1;lineage4.1.2.1 | 1 |
| lineage4.3.2;lineage4.1.2.1 | 1 |
| lineage2.2.1.1 | 1 |
| lineage4.8;lineage4.3.3 | 4 |
| lineage4.4.1.1;lineage4.1.2.1 | 1 |
| La1.6 | 1 |
| lineage2.2.1.2 | 2 |
| lineage3.1.1 | 1 |
| lineage7;lineage2.2.1.2 | 1 |
| lineage4.4 | 1 |
| La1.4 | 1 |
| lineage4.4.1.1 | 1 |
| La1.7.1 | 3 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 273 |
Geographic prevalence
Country level data for this variant is available for 9 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR4815621 | Sensitive | lineage3 | gb | SRR3619841 | Pre-XDR-TB | lineage2.2.1 | None | ERR4815408 | Sensitive | lineage3 | None | ERR161039 | Sensitive | lineage4.3.4 | None | SRR3601585 | Pre-XDR-TB | lineage2.2 | None | ERR1750907 | RR-TB | None | SRR3619764 | Pre-XDR-TB | lineage2.2 | None | SRR3618864 | Pre-XDR-TB | lineage2.2.1 | None | ERR181744 | HR-TB | None | ERR4815556 | RR-TB | lineage3 | None | ERR1750908 | Sensitive | lineage4 | None | SRR3675270 | HR-TB | None | ERR1750943 | Sensitive | lineage4 | None | ERR212114 | Other | lineage4.3.4.2.1 | None | ERR212034 | HR-TB | None | SRR3675555 | HR-TB | None | ERR4815858 | HR-TB | lineage4.9 | None | ERR212123 | Other | None | ERR4817069 | RR-TB | None | ERR2229760 | Other | lineage4.8 | dk | ERR4816702 | RR-TB | lineage4.6.2.2 | None | ERR2229198 | MDR-TB | lineage4.8 | None | ERR2229197 | Sensitive | lineage4 | None | ERR4816545 | Other | None | ERR2229380 | Sensitive | lineage4.8 | None | ERR4817294 | Other | lineage4.1.2 | None | ERR4816831 | Other | lineage4.1.2.1 | None | ERR4816717 | RR-TB | lineage3.1.2.1 | None | ERR2229791 | RR-TB | lineage4.9 | None | ERR4817915 | RR-TB | lineage4.9 | None | SAMN02380990 | MDR-TB | lineage4.6.1.2 | None | SRR4033549 | HR-TB | lineage2.2.2 | None | SAMN02380982 | MDR-TB | lineage4.3.4.2 | None | ERR2513405 | Other | lineage2.2.1 | None | ERR4817975 | Sensitive | lineage4.1.2.1 | gb | ERR2510756 | HR-TB | lineage2.2.1 | None | ERR2446566 | Other | lineage4.1 | None | ERR2510807 | Other | lineage4.6 | None | ERR1035138 | MDR-TB | None | ERR4818265 | Other | lineage4.1.2.1 | None | SRR5153833 | Other | lineage2.2.1 | None | ERR4818431 | Other | lineage1.1.2 | gb | SRR5341365 | Pre-XDR-TB | lineage3 | None | SRR5341412 | Pre-XDR-TB | lineage3 | None | ERR4819383 | RR-TB | lineage4.9 | None | ERR6359082 | Other | lineage4.9 | None | ERR4819863 | RR-TB | lineage4.9 | None | ERR4820030 | Other | lineage4.9 | None | SRR5341456 | Other | None | ERR4820503 | Other | lineage2.2.1 | None | SRR5341330 | HR-TB | None | ERR4821172 | RR-TB | lineage4.9 | None | ERR2693238 | HR-TB | lineage4.9 | None | SRR5535933 | HR-TB | None | ERR4820652 | Other | lineage1.1.1 | gb | SRR5341341 | Pre-XDR-TB | lineage2.2.1 | None | ERR2660539 | Other | lineage4.9 | None | ERR4821276 | Other | lineage3 | None | ERR4821318 | HR-TB | lineage4.6.2.2 | gb | ERR4821272 | RR-TB | lineage4.1.2.1 | None | ERR4821366 | Sensitive | lineage3.1.2 | None | ERR2693227 | Other | lineage4.9 | None | SRR5818452 | Other | lineage4.9 | None | SRR5818397 | Other | lineage4.9 | None | SRR5818586 | RR-TB | lineage4.2.2.2 | None | SRR6044952 | RR-TB | lineage4.9 | None | SRR6046046 | Other | None | SRR6045002 | MDR-TB | lineage4.9 | None | SRR6045053 | Other | None | SRR6045217 | Other | lineage4 | None | SRR6046253 | HR-TB | lineage4.9 | None | ERR4829817 | Sensitive | lineage4.3.3 | it | SRR6046299 | HR-TB | None | SRR6046382 | HR-TB | lineage2.2.1 | None | SRR6046492 | Other | None | ERR4831117 | HR-TB | None | SRR6046878 | HR-TB | lineage4 | None | ERR3077969 | Other | La1.3 | None | ERR502473 | Pre-XDR-TB | lineage4.9 | None | ERR502478 | RR-TB | lineage4.9 | None | ERR502474 | Pre-XDR-TB | lineage4.9 | None | ERR4972567 | MDR-TB | lineage4.3.2 | None | ERR502479 | RR-TB | lineage4.9 | None | SRR6785281 | Other | lineage4.2.1.1 | None | ERR4872322 | Pre-XDR-TB | lineage2.2.1 | None | ERR502481 | Pre-XDR-TB | lineage4.9 | None | SRR6982141 | RR-TB | lineage4.3.3 | None | SRR6789624 | MDR-TB | lineage4.1 | None | ERR5087846 | Other | La1.8.1 | None | SRR6824501 | Pre-XDR-TB | lineage2.2.1 | None | ERR502517 | MDR-TB | lineage5.1.1 | None | ERR5311077 | RR-TB | La1.8.1 | None | ERR3275941 | RR-TB | lineage4.3 | nl | ERR5087596 | Other | La1.8.1 | None | SRR8217918 | HR-TB | None | SRR7131129 | Sensitive | lineage4.1.2.1 | None | SRR9971333 | MDR-TB | lineage4.1.1.3 | None | SRR9940952 | Sensitive | lineage4.9 | None | SRR9970980 | Other | lineage4.1.2 | None | SRR7645899 | RR-TB | lineage2.2.1 | None | SRR7535047 | RR-TB | lineage4.6.1.1 | None | SRR7585400 | MDR-TB | lineage3 | None | SRR7585435 | Other | lineage4.9 | None | SRR9970981 | RR-TB | lineage4.3.2.1 | None | SRR7645901 | MDR-TB | lineage2.2.1 | None | SRR7645924 | Pre-XDR-TB | lineage4.2.1 | None | SRR7645906 | Other | lineage2.2.1 | None | SRR7645928 | RR-TB | lineage4.7 | None | SRR7645927 | Other | lineage4.8 | None | SRR7645971 | Other | lineage2.2.1 | None | SRR7645977 | MDR-TB | lineage4.2.1 | None | SRR7645973 | Other | lineage4.3.4.1 | None | SRR7645972 | MDR-TB | lineage4.2.1 | None | SRR9971065 | RR-TB | lineage2.2.1 | None | SRR7646018 | MDR-TB | lineage4.2.1 | None | SRR9971046 | MDR-TB | lineage4.8 | None | SRR9971060 | RR-TB | lineage2.2.1 | None | SRR7755645 | Pre-XDR-TB | lineage2.2.1 | None | SRR9971114 | Other | lineage2.2.1 | None | SRR7755649 | MDR-TB | lineage4.2.1 | None | SRR9971112 | Other | lineage2.2.1 | None | SRR7755655 | Other | lineage4.1.2.1 | None | SRR9971113 | Other | lineage2.2.1 | None | SRR9971122 | MDR-TB | lineage4.8 | None | SRR7755657 | Other | lineage4.8 | None | ERR323044 | HR-TB | lineage4.3.4.2.1 | None | SRR7755688 | Pre-XDR-TB | lineage4.2.1 | None | SRR7851312 | Other | La1.2 | None | DRR184629 | Other | lineage2.2.1 | None | DRR185000 | Other | lineage1.1.1.1 | None | DRR184932 | Other | lineage2.2.1 | None | DRR184982 | RR-TB | lineage2.2.1 | None | DRR185024 | Other | lineage2.2.2 | None | DRR185048 | Other | lineage2.2.1 | None | DRR189072 | Sensitive | lineage2.2.1 | None | DRR188519 | Other | lineage4.4.2 | None | ERR036207 | Other | lineage4.9 | None | ERR10762275 | MDR-TB | lineage4.2.1 | None | ERR037504 | Other | lineage4.9.1 | None | ERR1034647 | MDR-TB | lineage4.1.1.3 | None | ERR10762248 | MDR-TB | lineage4.2.1 | None | ERR108125 | Pre-XDR-TB | lineage4.9 | None | ERR10762495 | MDR-TB | lineage2.2.1 | None | ERR3283021 | HR-TB | None | ERR1199132 | Sensitive | lineage4.6.1.1 | None | ERR126597 | MDR-TB | lineage4.4.1.2 | None | ERR3283006 | RR-TB | lineage4.9 | None | ERR3324368 | RR-TB | lineage6.2.3;lineage1.1.2 | None | ERR3283055 | HR-TB | None | ERR3283046 | MDR-TB | lineage4.9 | None | ERR3468488 | RR-TB | La1.8.1 | None | ERR3445504 | HR-TB | None | ERR3439265 | Other | lineage4.9 | None | ERR3439489 | RR-TB | La1.8.1 | None | ERR3797047 | HR-TB | lineage4 | None | ERR3468613 | RR-TB | La1.8.1 | None | ERR3468776 | Other | La1.8.1 | None | ERR3797046 | HR-TB | None | ERR3797062 | RR-TB | lineage4.9 | None | ERR387051 | HR-TB | None | ERR3797081 | Sensitive | lineage4 | None | ERR3797065 | MDR-TB | lineage4 | None | ERR4187671 | Other | lineage4.9;La1.8.1 | None | ERR4769452 | HR-TB | None | ERR4195369 | Sensitive | lineage4.1.2.1 | None | ERR4769427 | Other | La1.2 | None | ERR4769497 | HR-TB | La1.2 | None | ERR4769457 | Other | lineage4.9 | None | ERR4769450 | HR-TB | None | ERR4769554 | RR-TB | lineage4.9 | None | ERR4797885 | XDR-TB | lineage2.2.1 | None | ERR4796351 | MDR-TB | lineage4.9 | None | ERR4799025 | Pre-XDR-TB | None | ERR5979407 | Other | lineage3 | None | ERR4799513 | HR-TB | lineage2.2 | None | ERR5917985 | MDR-TB | lineage2.2.1 | None | ERR4811493 | HR-TB | None | ERR5917706 | Other | lineage4.1.2 | by | ERR752012 | HR-TB | lineage1.1.1.1 | None | ERR5979454 | Pre-XDR-TB | lineage3 | None | ERR9121412 | Sensitive | lineage4.1.2.1 | None | ERR752229 | Other | lineage4.5 | None | ERR7801175 | RR-TB | lineage4.6.5 | None | ERR8975044 | Other | lineage4.1.1.2 | None | ERR9786092 | Sensitive | lineage6.3.1;lineage4.1.2.1 | None | ERR970449 | RR-TB | lineage4.1.1.3 | None | ERR9786164 | RR-TB | lineage4.1.1.3 | None | ERR9992784 | Pre-XDR-TB | lineage2.2.2 | None | ERR9786639 | Sensitive | lineage4.8 | None | ERR9786926 | Other | lineage4.3.2;lineage4.1.2.1 | None | ERR9786543 | Sensitive | lineage4.1.2.1 | None | ERR983238 | MDR-TB | lineage2.2.1.1 | None | ERR987707 | MDR-TB | lineage4.7 | None | ERR987765 | Sensitive | lineage4.6.1.1 | None | ERR9992879 | XDR-TB | lineage4.3.3 | None | SRR10303325 | MDR-TB | lineage2.2.1 | None | SRR1049560 | MDR-TB | lineage4.3.4.2.1 | None | SRR10315567 | Other | lineage2.2.1 | None | SRR10430377 | MDR-TB | lineage2.2.1 | None | SRR1049672 | Other | lineage3 | None | SRR1049581 | MDR-TB | lineage4.6.1.2 | None | SRR1049582 | MDR-TB | lineage4.6.1.2 | None | SRR1049559 | MDR-TB | lineage4.3.4.2.1 | None | SRR1049673 | Pre-XDR-TB | lineage3 | None | SRR1049725 | RR-TB | lineage4.1.2.1 | None | SRR1049676 | MDR-TB | lineage4.8;lineage4.3.3 | None | SRR1049677 | MDR-TB | lineage4.8;lineage4.3.3 | None | SRR1062871 | MDR-TB | lineage4.3.4.2.1 | None | SRR1049726 | MDR-TB | lineage4.4.1.1;lineage4.1.2.1 | None | SRR1062880 | MDR-TB | lineage4.6.1.2 | None | SRR1062918 | Pre-XDR-TB | lineage3 | None | SRR1062920 | MDR-TB | lineage4.8;lineage4.3.3 | None | SRR11349147 | RR-TB | lineage4.3.2.1 | None | SRR11342634 | MDR-TB | lineage4.8 | None | SRR1062928 | RR-TB | lineage4 | None | SRR10993951 | RR-TB | La1.6 | None | SRR1172796 | Sensitive | lineage2.2.1.2 | None | SRR1140712 | MDR-TB | lineage4.6.1.2 | None | SRR1140716 | Pre-XDR-TB | lineage3 | None | SRR1140574 | MDR-TB | lineage4.8;lineage4.3.3 | None | SRR1140736 | RR-TB | None | SRR1140753 | MDR-TB | lineage4.3.4.2.1 | None | SRR1173740 | Other | None | SRR1173185 | HR-TB | lineage4.9 | None | SRR1173281 | RR-TB | lineage3 | None | SRR1173450 | RR-TB | lineage4.9 | None | SRR1173719 | HR-TB | lineage3 | None | SRR1173170 | Other | lineage4.9 | None | SRR1173310 | MDR-TB | None | SRR1173770 | Other | lineage4.9 | None | SRR1175472 | MDR-TB | lineage4 | None | SRR1175127 | Sensitive | lineage2.2.1.2 | None | SRR1175473 | Other | lineage4.9 | None | SRR1175474 | HR-TB | lineage4.9 | None | SRR1175491 | MDR-TB | lineage4 | None | SRR1180440 | Other | lineage4.9 | None | SRR14782405 | HR-TB | None | SRR1184329 | MDR-TB | lineage4.9 | None | SRR1196478 | MDR-TB | lineage4.9 | None | SRR11972425 | Pre-XDR-TB | lineage2.2.1 | None | SRR12142339 | HR-TB | lineage2.2.1 | None | SRR12634609 | MDR-TB | lineage3.1.1 | None | SRR13423546 | Other | lineage4.4.2 | None | SRR1180446 | Other | lineage4.9 | None | SRR14334195 | Pre-XDR-TB | lineage2.2.1 | None | SRR18549032 | HR-TB | lineage7;lineage2.2.1.2 | None | SRR14782539 | MDR-TB | lineage4.2.1 | None | SRR15508556 | Other | lineage4.3.4.1 | None | SRR16156751 | RR-TB | lineage4.9 | None | SRR16156832 | RR-TB | None | SRR16157123 | Other | lineage4.9 | None | SRR16627752 | RR-TB | lineage4.4 | None | SRR1792012 | Other | La1.8.1 | None | SRR1792022 | Other | La1.8.1 | None | SRR1792024 | Other | La1.8.1 | None | SRR15316595 | RR-TB | lineage4.4.2 | None | SRR16156697 | MDR-TB | lineage2.2.1 | None | SRR16156804 | RR-TB | lineage4.9 | None | SRR16278274 | Other | La1.4 | None | SRR17567917 | RR-TB | lineage4.4.1.1 | None | SRR1791725 | Other | La1.8.1 | None | SRR1792011 | Other | La1.8.1 | None | SRR1792025 | Other | La1.8.1 | None | SRR20969731 | Other | lineage2.2.1 | None | SRR20969708 | HR-TB | lineage2.2 | None | SRR21469201 | Other | La1.7.1 | None | SRR20970016 | Other | lineage2.2 | None | SRR2101082 | Sensitive | lineage4.1.2.1 | None | SRR21469202 | Other | La1.7.1 | None | SRR22175249 | Pre-XDR-TB | lineage2.2.1 | None | ERR4815121 | HR-TB | lineage4.6.2.2 | None | SRR21469200 | Other | La1.7.1 | None | SRR22424851 | MDR-TB | lineage4.3.3 | None |
|---|
