EBG00000313339 - n.2340A>G


Drug resistance types
24 Sensitive 48 RR-TB 38 HR-TB 53 MDR-TB 25 Pre-XDR-TB 2 XDR-TB 83 Other
lineage Counts
lineage Count
lineage3 15
lineage2.2.1 37
lineage4.3.4 1
lineage2.2 5
32
lineage4 11
lineage4.3.4.2.1 6
lineage4.9 45
lineage4.8 9
lineage4.6.2.2 3
lineage4.1.2 3
lineage4.1.2.1 11
lineage3.1.2.1 1
lineage4.6.1.2 5
lineage2.2.2 3
lineage4.3.4.2 1
lineage4.1 2
lineage4.6 1
lineage1.1.2 1
lineage1.1.1 1
lineage3.1.2 1
lineage4.2.2.2 1
lineage4.3.3 4
La1.3 1
lineage4.3.2 1
lineage4.2.1.1 1
La1.8.1 13
lineage5.1.1 1
lineage4.3 1
lineage4.1.1.3 4
lineage4.6.1.1 3
lineage4.3.2.1 2
lineage4.2.1 9
lineage4.7 2
lineage4.3.4.1 2
La1.2 3
lineage1.1.1.1 2
lineage4.4.2 3
lineage4.9.1 1
lineage4.4.1.2 1
lineage6.2.3;lineage1.1.2 1
lineage4.9;La1.8.1 1
lineage4.5 1
lineage4.6.5 1
lineage4.1.1.2 1
lineage6.3.1;lineage4.1.2.1 1
lineage4.3.2;lineage4.1.2.1 1
lineage2.2.1.1 1
lineage4.8;lineage4.3.3 4
lineage4.4.1.1;lineage4.1.2.1 1
La1.6 1
lineage2.2.1.2 2
lineage3.1.1 1
lineage7;lineage2.2.1.2 1
lineage4.4 1
La1.4 1
lineage4.4.1.1 1
La1.7.1 3
spoligotype Counts
spoligotype Count
None 273
Geographic prevalence
Country level data for this variant is available for 9 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR4815621 Sensitive lineage3 gb
SRR3619841 Pre-XDR-TB lineage2.2.1 None
ERR4815408 Sensitive lineage3 None
ERR161039 Sensitive lineage4.3.4 None
SRR3601585 Pre-XDR-TB lineage2.2 None
ERR1750907 RR-TB None
SRR3619764 Pre-XDR-TB lineage2.2 None
SRR3618864 Pre-XDR-TB lineage2.2.1 None
ERR181744 HR-TB None
ERR4815556 RR-TB lineage3 None
ERR1750908 Sensitive lineage4 None
SRR3675270 HR-TB None
ERR1750943 Sensitive lineage4 None
ERR212114 Other lineage4.3.4.2.1 None
ERR212034 HR-TB None
SRR3675555 HR-TB None
ERR4815858 HR-TB lineage4.9 None
ERR212123 Other None
ERR4817069 RR-TB None
ERR2229760 Other lineage4.8 dk
ERR4816702 RR-TB lineage4.6.2.2 None
ERR2229198 MDR-TB lineage4.8 None
ERR2229197 Sensitive lineage4 None
ERR4816545 Other None
ERR2229380 Sensitive lineage4.8 None
ERR4817294 Other lineage4.1.2 None
ERR4816831 Other lineage4.1.2.1 None
ERR4816717 RR-TB lineage3.1.2.1 None
ERR2229791 RR-TB lineage4.9 None
ERR4817915 RR-TB lineage4.9 None
SAMN02380990 MDR-TB lineage4.6.1.2 None
SRR4033549 HR-TB lineage2.2.2 None
SAMN02380982 MDR-TB lineage4.3.4.2 None
ERR2513405 Other lineage2.2.1 None
ERR4817975 Sensitive lineage4.1.2.1 gb
ERR2510756 HR-TB lineage2.2.1 None
ERR2446566 Other lineage4.1 None
ERR2510807 Other lineage4.6 None
ERR1035138 MDR-TB None
ERR4818265 Other lineage4.1.2.1 None
SRR5153833 Other lineage2.2.1 None
ERR4818431 Other lineage1.1.2 gb
SRR5341365 Pre-XDR-TB lineage3 None
SRR5341412 Pre-XDR-TB lineage3 None
ERR4819383 RR-TB lineage4.9 None
ERR6359082 Other lineage4.9 None
ERR4819863 RR-TB lineage4.9 None
ERR4820030 Other lineage4.9 None
SRR5341456 Other None
ERR4820503 Other lineage2.2.1 None
SRR5341330 HR-TB None
ERR4821172 RR-TB lineage4.9 None
ERR2693238 HR-TB lineage4.9 None
SRR5535933 HR-TB None
ERR4820652 Other lineage1.1.1 gb
SRR5341341 Pre-XDR-TB lineage2.2.1 None
ERR2660539 Other lineage4.9 None
ERR4821276 Other lineage3 None
ERR4821318 HR-TB lineage4.6.2.2 gb
ERR4821272 RR-TB lineage4.1.2.1 None
ERR4821366 Sensitive lineage3.1.2 None
ERR2693227 Other lineage4.9 None
SRR5818452 Other lineage4.9 None
SRR5818397 Other lineage4.9 None
SRR5818586 RR-TB lineage4.2.2.2 None
SRR6044952 RR-TB lineage4.9 None
SRR6046046 Other None
SRR6045002 MDR-TB lineage4.9 None
SRR6045053 Other None
SRR6045217 Other lineage4 None
SRR6046253 HR-TB lineage4.9 None
ERR4829817 Sensitive lineage4.3.3 it
SRR6046299 HR-TB None
SRR6046382 HR-TB lineage2.2.1 None
SRR6046492 Other None
ERR4831117 HR-TB None
SRR6046878 HR-TB lineage4 None
ERR3077969 Other La1.3 None
ERR502473 Pre-XDR-TB lineage4.9 None
ERR502478 RR-TB lineage4.9 None
ERR502474 Pre-XDR-TB lineage4.9 None
ERR4972567 MDR-TB lineage4.3.2 None
ERR502479 RR-TB lineage4.9 None
SRR6785281 Other lineage4.2.1.1 None
ERR4872322 Pre-XDR-TB lineage2.2.1 None
ERR502481 Pre-XDR-TB lineage4.9 None
SRR6982141 RR-TB lineage4.3.3 None
SRR6789624 MDR-TB lineage4.1 None
ERR5087846 Other La1.8.1 None
SRR6824501 Pre-XDR-TB lineage2.2.1 None
ERR502517 MDR-TB lineage5.1.1 None
ERR5311077 RR-TB La1.8.1 None
ERR3275941 RR-TB lineage4.3 nl
ERR5087596 Other La1.8.1 None
SRR8217918 HR-TB None
SRR7131129 Sensitive lineage4.1.2.1 None
SRR9971333 MDR-TB lineage4.1.1.3 None
SRR9940952 Sensitive lineage4.9 None
SRR9970980 Other lineage4.1.2 None
SRR7645899 RR-TB lineage2.2.1 None
SRR7535047 RR-TB lineage4.6.1.1 None
SRR7585400 MDR-TB lineage3 None
SRR7585435 Other lineage4.9 None
SRR9970981 RR-TB lineage4.3.2.1 None
SRR7645901 MDR-TB lineage2.2.1 None
SRR7645924 Pre-XDR-TB lineage4.2.1 None
SRR7645906 Other lineage2.2.1 None
SRR7645928 RR-TB lineage4.7 None
SRR7645927 Other lineage4.8 None
SRR7645971 Other lineage2.2.1 None
SRR7645977 MDR-TB lineage4.2.1 None
SRR7645973 Other lineage4.3.4.1 None
SRR7645972 MDR-TB lineage4.2.1 None
SRR9971065 RR-TB lineage2.2.1 None
SRR7646018 MDR-TB lineage4.2.1 None
SRR9971046 MDR-TB lineage4.8 None
SRR9971060 RR-TB lineage2.2.1 None
SRR7755645 Pre-XDR-TB lineage2.2.1 None
SRR9971114 Other lineage2.2.1 None
SRR7755649 MDR-TB lineage4.2.1 None
SRR9971112 Other lineage2.2.1 None
SRR7755655 Other lineage4.1.2.1 None
SRR9971113 Other lineage2.2.1 None
SRR9971122 MDR-TB lineage4.8 None
SRR7755657 Other lineage4.8 None
ERR323044 HR-TB lineage4.3.4.2.1 None
SRR7755688 Pre-XDR-TB lineage4.2.1 None
SRR7851312 Other La1.2 None
DRR184629 Other lineage2.2.1 None
DRR185000 Other lineage1.1.1.1 None
DRR184932 Other lineage2.2.1 None
DRR184982 RR-TB lineage2.2.1 None
DRR185024 Other lineage2.2.2 None
DRR185048 Other lineage2.2.1 None
DRR189072 Sensitive lineage2.2.1 None
DRR188519 Other lineage4.4.2 None
ERR036207 Other lineage4.9 None
ERR10762275 MDR-TB lineage4.2.1 None
ERR037504 Other lineage4.9.1 None
ERR1034647 MDR-TB lineage4.1.1.3 None
ERR10762248 MDR-TB lineage4.2.1 None
ERR108125 Pre-XDR-TB lineage4.9 None
ERR10762495 MDR-TB lineage2.2.1 None
ERR3283021 HR-TB None
ERR1199132 Sensitive lineage4.6.1.1 None
ERR126597 MDR-TB lineage4.4.1.2 None
ERR3283006 RR-TB lineage4.9 None
ERR3324368 RR-TB lineage6.2.3;lineage1.1.2 None
ERR3283055 HR-TB None
ERR3283046 MDR-TB lineage4.9 None
ERR3468488 RR-TB La1.8.1 None
ERR3445504 HR-TB None
ERR3439265 Other lineage4.9 None
ERR3439489 RR-TB La1.8.1 None
ERR3797047 HR-TB lineage4 None
ERR3468613 RR-TB La1.8.1 None
ERR3468776 Other La1.8.1 None
ERR3797046 HR-TB None
ERR3797062 RR-TB lineage4.9 None
ERR387051 HR-TB None
ERR3797081 Sensitive lineage4 None
ERR3797065 MDR-TB lineage4 None
ERR4187671 Other lineage4.9;La1.8.1 None
ERR4769452 HR-TB None
ERR4195369 Sensitive lineage4.1.2.1 None
ERR4769427 Other La1.2 None
ERR4769497 HR-TB La1.2 None
ERR4769457 Other lineage4.9 None
ERR4769450 HR-TB None
ERR4769554 RR-TB lineage4.9 None
ERR4797885 XDR-TB lineage2.2.1 None
ERR4796351 MDR-TB lineage4.9 None
ERR4799025 Pre-XDR-TB None
ERR5979407 Other lineage3 None
ERR4799513 HR-TB lineage2.2 None
ERR5917985 MDR-TB lineage2.2.1 None
ERR4811493 HR-TB None
ERR5917706 Other lineage4.1.2 by
ERR752012 HR-TB lineage1.1.1.1 None
ERR5979454 Pre-XDR-TB lineage3 None
ERR9121412 Sensitive lineage4.1.2.1 None
ERR752229 Other lineage4.5 None
ERR7801175 RR-TB lineage4.6.5 None
ERR8975044 Other lineage4.1.1.2 None
ERR9786092 Sensitive lineage6.3.1;lineage4.1.2.1 None
ERR970449 RR-TB lineage4.1.1.3 None
ERR9786164 RR-TB lineage4.1.1.3 None
ERR9992784 Pre-XDR-TB lineage2.2.2 None
ERR9786639 Sensitive lineage4.8 None
ERR9786926 Other lineage4.3.2;lineage4.1.2.1 None
ERR9786543 Sensitive lineage4.1.2.1 None
ERR983238 MDR-TB lineage2.2.1.1 None
ERR987707 MDR-TB lineage4.7 None
ERR987765 Sensitive lineage4.6.1.1 None
ERR9992879 XDR-TB lineage4.3.3 None
SRR10303325 MDR-TB lineage2.2.1 None
SRR1049560 MDR-TB lineage4.3.4.2.1 None
SRR10315567 Other lineage2.2.1 None
SRR10430377 MDR-TB lineage2.2.1 None
SRR1049672 Other lineage3 None
SRR1049581 MDR-TB lineage4.6.1.2 None
SRR1049582 MDR-TB lineage4.6.1.2 None
SRR1049559 MDR-TB lineage4.3.4.2.1 None
SRR1049673 Pre-XDR-TB lineage3 None
SRR1049725 RR-TB lineage4.1.2.1 None
SRR1049676 MDR-TB lineage4.8;lineage4.3.3 None
SRR1049677 MDR-TB lineage4.8;lineage4.3.3 None
SRR1062871 MDR-TB lineage4.3.4.2.1 None
SRR1049726 MDR-TB lineage4.4.1.1;lineage4.1.2.1 None
SRR1062880 MDR-TB lineage4.6.1.2 None
SRR1062918 Pre-XDR-TB lineage3 None
SRR1062920 MDR-TB lineage4.8;lineage4.3.3 None
SRR11349147 RR-TB lineage4.3.2.1 None
SRR11342634 MDR-TB lineage4.8 None
SRR1062928 RR-TB lineage4 None
SRR10993951 RR-TB La1.6 None
SRR1172796 Sensitive lineage2.2.1.2 None
SRR1140712 MDR-TB lineage4.6.1.2 None
SRR1140716 Pre-XDR-TB lineage3 None
SRR1140574 MDR-TB lineage4.8;lineage4.3.3 None
SRR1140736 RR-TB None
SRR1140753 MDR-TB lineage4.3.4.2.1 None
SRR1173740 Other None
SRR1173185 HR-TB lineage4.9 None
SRR1173281 RR-TB lineage3 None
SRR1173450 RR-TB lineage4.9 None
SRR1173719 HR-TB lineage3 None
SRR1173170 Other lineage4.9 None
SRR1173310 MDR-TB None
SRR1173770 Other lineage4.9 None
SRR1175472 MDR-TB lineage4 None
SRR1175127 Sensitive lineage2.2.1.2 None
SRR1175473 Other lineage4.9 None
SRR1175474 HR-TB lineage4.9 None
SRR1175491 MDR-TB lineage4 None
SRR1180440 Other lineage4.9 None
SRR14782405 HR-TB None
SRR1184329 MDR-TB lineage4.9 None
SRR1196478 MDR-TB lineage4.9 None
SRR11972425 Pre-XDR-TB lineage2.2.1 None
SRR12142339 HR-TB lineage2.2.1 None
SRR12634609 MDR-TB lineage3.1.1 None
SRR13423546 Other lineage4.4.2 None
SRR1180446 Other lineage4.9 None
SRR14334195 Pre-XDR-TB lineage2.2.1 None
SRR18549032 HR-TB lineage7;lineage2.2.1.2 None
SRR14782539 MDR-TB lineage4.2.1 None
SRR15508556 Other lineage4.3.4.1 None
SRR16156751 RR-TB lineage4.9 None
SRR16156832 RR-TB None
SRR16157123 Other lineage4.9 None
SRR16627752 RR-TB lineage4.4 None
SRR1792012 Other La1.8.1 None
SRR1792022 Other La1.8.1 None
SRR1792024 Other La1.8.1 None
SRR15316595 RR-TB lineage4.4.2 None
SRR16156697 MDR-TB lineage2.2.1 None
SRR16156804 RR-TB lineage4.9 None
SRR16278274 Other La1.4 None
SRR17567917 RR-TB lineage4.4.1.1 None
SRR1791725 Other La1.8.1 None
SRR1792011 Other La1.8.1 None
SRR1792025 Other La1.8.1 None
SRR20969731 Other lineage2.2.1 None
SRR20969708 HR-TB lineage2.2 None
SRR21469201 Other La1.7.1 None
SRR20970016 Other lineage2.2 None
SRR2101082 Sensitive lineage4.1.2.1 None
SRR21469202 Other La1.7.1 None
SRR22175249 Pre-XDR-TB lineage2.2.1 None
ERR4815121 HR-TB lineage4.6.2.2 None
SRR21469200 Other La1.7.1 None
SRR22424851 MDR-TB lineage4.3.3 None