EBG00000313339 - n.2340A>G
Drug resistance types
18 Sensitive
29 RR-TB
25 HR-TB
35 MDR-TB
12 Pre-XDR-TB
2 XDR-TB
105 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.3.4.1 | 4 |
| lineage4.8 | 8 |
| lineage2.2.1 | 30 |
| lineage4.9 | 63 |
| lineage4.1.2.1;lineage4.4.1 | 1 |
| lineage4.6.1.2 | 5 |
| lineage4.2.1 | 7 |
| lineage4.7 | 2 |
| lineage2.2.1.2;lineage7 | 1 |
| M.canetti;lineage4.9;lineage9 | 1 |
| lineage4.4.2 | 2 |
| lineage4 | 1 |
| lineage4.3.1;lineage4.9;lineage6 | 1 |
| lineage4.6.3;lineage4.9 | 1 |
| lineage2.1;lineage4.9 | 2 |
| lineage4.1.2.1;lineage6.3.1 | 1 |
| lineage4.1.2.1 | 7 |
| La1.8.1 | 10 |
| La1.7.1 | 4 |
| La3;lineage4.3.4 | 1 |
| M.canetti;lineage1 | 1 |
| lineage4.6.1.1 | 3 |
| lineage3;lineage4 | 1 |
| lineage2.2.1.2 | 2 |
| lineage6.1.3 | 1 |
| lineage4.1.2.1;lineage4.9 | 1 |
| lineage1.1.2;lineage6.2.3 | 1 |
| lineage2.2 | 3 |
| La1.7;lineage4.9 | 2 |
| lineage3.1.1 | 2 |
| lineage2.2.1;lineage4.9 | 1 |
| lineage4.3.4.2.1 | 7 |
| lineage4.9;lineage6.1.3 | 1 |
| lineage4.3.2.1 | 2 |
| lineage3 | 4 |
| lineage4.3.3;lineage4.8 | 4 |
| lineage4.1.2.1;lineage4.3.2 | 1 |
| lineage4.5 | 1 |
| La1.7.X-unk4;lineage4.9 | 1 |
| lineage4.3 | 1 |
| lineage4.1.1.3 | 5 |
| lineage4.3.2 | 1 |
| lineage4.9;lineage9 | 1 |
| lineage2.2.2 | 3 |
| lineage1.1.1.1 | 2 |
| lineage4.1.1.1 | 1 |
| lineage4.3.3 | 2 |
| lineage4.1.1.3.1 | 1 |
| La1;lineage4.9 | 1 |
| lineage4.4.1.1 | 1 |
| lineage4.1.2.1;lineage4.4.1.1 | 1 |
| La1.3 | 1 |
| La3;lineage4.9 | 1 |
| La1.6 | 1 |
| lineage4.1.2 | 1 |
| La1.2 | 2 |
| lineage2.2;lineage4 | 1 |
| lineage4.4 | 1 |
| La1.2;La1.8.1 | 1 |
| lineage4.4.1.2 | 1 |
| lineage4.9;lineage7 | 2 |
| lineage4.1.1.2 | 1 |
| La1.4 | 1 |
| lineage4.2.1.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 226 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR15508556 | Other | lineage4.3.4.1 | None | ERR9786639 | Sensitive | lineage4.8 | None | ERR2513405 | Other | lineage2.2.1 | None | SRR1175474 | Other | lineage4.9 | None | SRR6044952 | Other | lineage4.9 | None | SRR6045002 | RR-TB | lineage4.9 | None | SRR6045217 | Sensitive | lineage4.9 | None | SRR1049725 | Other | lineage4.1.2.1;lineage4.4.1 | None | SRR5163959 | Other | lineage4.9 | None | SRR1173170 | Other | lineage4.9 | None | SRR1140712 | MDR-TB | lineage4.6.1.2 | None | SRR14782539 | MDR-TB | lineage4.2.1 | None | SRR7645928 | Other | lineage4.7 | None | SRR18549032 | HR-TB | lineage2.2.1.2;lineage7 | None | SRR7645906 | Other | lineage2.2.1 | None | ERR387051 | Other | lineage4.9 | None | ERR1063856 | HR-TB | M.canetti;lineage4.9;lineage9 | None | ERR502474 | RR-TB | lineage4.9 | None | SRR5535933 | Other | lineage4.9 | None | DRR184982 | Other | lineage2.2.1 | None | SRR15316595 | RR-TB | lineage4.4.2 | None | SRR6045053 | Other | lineage4 | None | SRR6046299 | Other | lineage4.3.1;lineage4.9;lineage6 | None | SRR6046577 | Other | lineage4.6.3;lineage4.9 | None | SRR6046046 | Other | lineage4.9 | None | SRR3675495 | Other | lineage2.1;lineage4.9 | None | ERR4872322 | Pre-XDR-TB | lineage2.2.1 | None | SRR5341341 | Pre-XDR-TB | lineage2.2.1 | None | ERR108125 | RR-TB | lineage4.9 | None | SRR5153833 | Other | lineage2.2.1 | None | ERR4799025 | Other | lineage4.8 | None | SRR6046492 | Other | lineage4.9 | None | ERR1035138 | MDR-TB | lineage2.1;lineage4.9 | None | SRR7755688 | Pre-XDR-TB | lineage4.2.1 | None | SRR7645927 | Other | lineage4.8 | None | ERR9786092 | Sensitive | lineage4.1.2.1;lineage6.3.1 | None | ERR9786543 | Sensitive | lineage4.1.2.1 | None | SRR5341330 | Other | lineage4.9 | None | ERR212123 | Other | lineage4.9 | None | SRR6046593 | Other | lineage4.9 | None | ERR3468613 | Other | La1.8.1 | None | ERR4769457 | Other | lineage4.9 | None | SRR21469201 | Other | La1.7.1 | None | ERR161039 | HR-TB | La3;lineage4.3.4 | None | SRR15014655 | Other | M.canetti;lineage1 | None | SRR16157123 | Other | lineage4.9 | None | DRR184629 | Other | lineage2.2.1 | None | ERR9121412 | Sensitive | lineage4.1.2.1 | None | SRR7535047 | RR-TB | lineage4.6.1.1 | None | SRR14782405 | HR-TB | lineage4.9 | None | SRR1180446 | Other | lineage4.9 | None | SRR3619841 | Pre-XDR-TB | lineage2.2.1 | None | SRR1173740 | Other | lineage3;lineage4 | None | SRR1172796 | Sensitive | lineage2.2.1.2 | None | ERR2660539 | Other | lineage4.9 | None | SRR16156697 | RR-TB | lineage2.2.1 | None | SRR1184329 | Other | lineage4.9 | None | ERR1023236 | Other | lineage6.1.3 | None | SRR9971113 | Other | lineage2.2.1 | None | ERR4769452 | Other | lineage4.9 | None | SRR1062928 | Other | lineage4.1.2.1;lineage4.9 | None | SRR1173185 | Other | lineage4.9 | None | SRR21469202 | Other | La1.7.1 | None | ERR6359082 | Other | lineage4.9 | None | SRR1792011 | Other | La1.8.1 | None | ERR3324368 | RR-TB | lineage1.1.2;lineage6.2.3 | None | SRR5818452 | Other | lineage4.9 | None | SRR11662690 | HR-TB | lineage4.9 | None | SRR5341456 | Other | lineage4.9 | None | ERR4811493 | HR-TB | lineage4.9 | None | SRR20970016 | Other | lineage2.2 | None | SRR28351488 | MDR-TB | lineage2.2.1 | None | SRR9971122 | MDR-TB | lineage4.8 | None | SRR1175491 | MDR-TB | lineage4.3.4.1 | None | SRR7755649 | MDR-TB | lineage4.2.1 | None | ERR212034 | HR-TB | La1.7;lineage4.9 | None | SRR12634609 | MDR-TB | lineage3.1.1 | None | SRR16156804 | Sensitive | lineage4.9 | None | SRR1173310 | Other | lineage3.1.1 | None | SRR12708406 | HR-TB | lineage2.2.1;lineage4.9 | None | DRR473792 | Sensitive | lineage2.2.1 | None | ERR4817915 | Other | lineage4.9 | None | ERR323044 | HR-TB | lineage4.3.4.2.1 | None | ERR3445504 | Other | lineage4.9;lineage6.1.3 | None | ERR10762275 | MDR-TB | lineage4.2.1 | None | SRR11349147 | RR-TB | lineage4.3.2.1 | None | SRR1140716 | Other | lineage3 | None | SRR1049677 | MDR-TB | lineage4.3.3;lineage4.8 | None | SRR1175472 | RR-TB | lineage4.3.4.1 | None | ERR9786926 | Other | lineage4.1.2.1;lineage4.3.2 | None | ERR752229 | Other | lineage4.5 | None | ERR1199132 | Sensitive | lineage4.6.1.1 | None | SRR3675270 | Other | lineage4.9 | None | SRR1181403 | Other | lineage4.9 | None | SRR1049676 | MDR-TB | lineage4.3.3;lineage4.8 | None | SRR12142339 | HR-TB | lineage2.2.1 | None | SRR1792025 | Other | La1.8.1 | None | SRR1180440 | Other | lineage4.9 | None | SRR1140574 | MDR-TB | lineage4.3.3;lineage4.8 | None | SRR3619764 | Pre-XDR-TB | lineage2.2.1 | None | SRR7645977 | MDR-TB | lineage4.2.1 | None | ERR502481 | RR-TB | lineage4.9 | None | SRR3675520 | Other | La1.7.X-unk4;lineage4.9 | None | SRR1140753 | RR-TB | lineage4.3.4.2.1 | None | ERR12328189 | Sensitive | lineage2.2.1 | None | SRR7755655 | Other | lineage4.1.2.1 | None | SRR7240476 | Other | La1.8.1 | None | SRR7645899 | Other | lineage2.2.1 | None | SRR3618864 | Pre-XDR-TB | lineage2.2.1 | None | SRR7645973 | Other | lineage4.3.4.1 | None | ERR987765 | Sensitive | lineage4.6.1.1 | None | ERR3275941 | RR-TB | lineage4.3 | nl | SRR3601585 | Pre-XDR-TB | lineage2.2.1 | None | SRR14782054 | Other | lineage4.9 | None | ERR2229198 | Sensitive | lineage4.8 | None | ERR970449 | RR-TB | lineage4.1.1.3 | None | ERR4769450 | Other | lineage4.9 | None | SRR7645901 | MDR-TB | lineage2.2.1 | None | ERR4972567 | MDR-TB | lineage4.3.2 | None | ERR161037 | Other | lineage4.9 | None | SRR10315567 | HR-TB | lineage2.2.1 | None | SRR9970981 | RR-TB | lineage4.3.2.1 | None | SRR6789624 | HR-TB | lineage4.1.1.3 | None | SRR6046720 | HR-TB | lineage4.9;lineage9 | None | ERR2041726 | MDR-TB | lineage4.1.2.1 | None | ERR4820030 | Other | lineage4.9 | None | DRR188519 | Other | lineage4.4.2 | None | SRR1062920 | MDR-TB | lineage4.3.3;lineage4.8 | None | ERR5311077 | Other | La1.8.1 | None | ERR4195369 | Sensitive | lineage4.1.2.1 | None | SAMN02380982 | MDR-TB | lineage4.3.4.2.1 | None | ERR3797062 | RR-TB | lineage4.9 | None | DRR185024 | Other | lineage2.2.2 | None | DRR185000 | Other | lineage1.1.1.1 | None | SRR11342634 | MDR-TB | lineage4.8 | None | DRR189072 | Sensitive | lineage2.2.1 | None | SRR4033549 | Other | lineage2.2.2 | None | ERR752012 | HR-TB | lineage1.1.1.1 | None | SRR8758877 | MDR-TB | lineage4.1.1.1 | None | SRR1792022 | Other | La1.8.1 | None | ERR9992879 | XDR-TB | lineage4.3.3 | None | SRR6046253 | Sensitive | lineage4.9 | None | SRR9971112 | Other | lineage2.2.1 | None | SRR7645972 | MDR-TB | lineage4.2.1 | None | SRR1792012 | Other | La1.8.1 | None | ERR2041725 | MDR-TB | lineage4.1.2.1 | None | ERR4819863 | RR-TB | lineage4.9 | None | ERR9992784 | XDR-TB | lineage2.2.2 | None | SRR7070157 | Other | lineage4.1.1.3.1 | None | ERR176560 | HR-TB | La1.7;lineage4.9 | None | SRR9971333 | MDR-TB | lineage4.1.1.3 | None | SRR10808730 | Other | lineage4.9 | None | ERR4769497 | Other | La1;lineage4.9 | None | ERR5917985 | MDR-TB | lineage2.2.1 | None | ERR5979407 | Other | lineage3 | None | SRR17567917 | RR-TB | lineage4.4.1.1 | None | SRR1791725 | Other | La1.8.1 | None | SRR1049726 | Other | lineage4.1.2.1;lineage4.4.1.1 | None | SRR7646018 | MDR-TB | lineage4.2.1 | None | ERR13285192 | Sensitive | lineage4.9 | None | SRR1140736 | Other | lineage4.1.2.1 | None | ERR3077969 | Other | La1.3 | None | ERR181744 | HR-TB | La3;lineage4.9 | None | SRR1049560 | MDR-TB | lineage4.3.4.2.1 | None | SRR7755657 | Other | lineage4.8 | None | SRR9971114 | Other | lineage2.2.1 | None | SRR10993951 | RR-TB | La1.6 | None | SRR1175127 | Other | lineage2.2.1.2 | None | SRR21469200 | Other | La1.7.1 | None | ERR4769554 | RR-TB | lineage4.9 | None | ERR5162090 | RR-TB | lineage4.9 | None | SRR11972425 | Pre-XDR-TB | lineage2.2.1 | None | SRR22175249 | Pre-XDR-TB | lineage2.2.1 | None | SRR9970980 | HR-TB | lineage4.1.2 | None | SRR20969708 | HR-TB | lineage2.2 | None | SRR6824501 | Pre-XDR-TB | lineage2.2.1 | None | ERR4769427 | Other | La1.2 | None | SRR7851312 | Other | La1.2 | None | SRR20969731 | Other | lineage2.2.1 | None | SRR6045548 | Sensitive | lineage4.9 | None | SRR16156832 | RR-TB | lineage2.2;lineage4 | None | SRR7755645 | Pre-XDR-TB | lineage2.2.1 | None | ERR987707 | MDR-TB | lineage4.7 | None | ERR2446566 | Other | lineage4.9 | None | SRR16627752 | RR-TB | lineage4.4 | None | SRR1062880 | MDR-TB | lineage4.6.1.2 | None | SRR6045347 | Other | lineage4.9 | None | SRR7240033 | Other | La1.2;La1.8.1 | None | ERR502479 | RR-TB | lineage4.9 | None | SRR6982141 | Other | lineage4.3.3 | None | SAMN02380990 | MDR-TB | lineage4.6.1.2 | None | ERR502473 | RR-TB | lineage4.9 | None | ERR502478 | RR-TB | lineage4.9 | None | SRR1049581 | MDR-TB | lineage4.6.1.2 | None | ERR3283021 | HR-TB | lineage4.9 | None | SRR1792024 | Other | La1.8.1 | None | SRR5818397 | Other | lineage4.9 | None | ERR13285191 | Sensitive | lineage4.9 | None | ERR3468488 | Other | La1.8.1 | None | ERR126597 | HR-TB | lineage4.4.1.2 | None | ERR3797047 | MDR-TB | lineage4.9 | None | SRR7240538 | Other | La1.7.1 | None | SRR1175473 | Other | lineage4.9 | None | ERR4831117 | HR-TB | lineage4.9;lineage7 | None | ERR3797046 | HR-TB | lineage4.9 | None | ERR3797065 | RR-TB | lineage4.9 | None | ERR8975044 | Other | lineage4.1.1.2 | None | ERR9786164 | RR-TB | lineage4.1.1.3 | None | ERR4799513 | HR-TB | lineage2.2 | None | ERR4819383 | RR-TB | lineage4.9 | None | SRR16278274 | Other | La1.4 | None | SRR1062871 | RR-TB | lineage4.3.4.2.1 | None | SRR1196478 | Other | lineage4.9 | None | SRR6785281 | Other | lineage4.2.1.1 | None | ERR212114 | Other | lineage4.3.4.2.1 | None | ERR1034647 | MDR-TB | lineage4.1.1.3 | None | SRR1049582 | MDR-TB | lineage4.6.1.2 | None | SRR7645971 | Other | lineage2.2.1 | None | SRR1173770 | Other | lineage4.9 | None | SRR9971046 | MDR-TB | lineage4.8 | None | SRR1049559 | MDR-TB | lineage4.3.4.2.1 | None | SRR1173281 | Other | lineage3 | None | SRR5341365 | Pre-XDR-TB | lineage3 | None | ERR3283055 | HR-TB | lineage4.9 | None | SRR1181256 | Other | lineage4.9 | None | SRR3675539 | HR-TB | lineage4.9;lineage7 | None |
|---|
