EBG00000313339 - n.2340A>G


Drug resistance types
18 Sensitive 29 RR-TB 25 HR-TB 35 MDR-TB 12 Pre-XDR-TB 2 XDR-TB 105 Other
lineage Counts
lineage Count
lineage4.3.4.1 4
lineage4.8 8
lineage2.2.1 30
lineage4.9 63
lineage4.1.2.1;lineage4.4.1 1
lineage4.6.1.2 5
lineage4.2.1 7
lineage4.7 2
lineage2.2.1.2;lineage7 1
M.canetti;lineage4.9;lineage9 1
lineage4.4.2 2
lineage4 1
lineage4.3.1;lineage4.9;lineage6 1
lineage4.6.3;lineage4.9 1
lineage2.1;lineage4.9 2
lineage4.1.2.1;lineage6.3.1 1
lineage4.1.2.1 7
La1.8.1 10
La1.7.1 4
La3;lineage4.3.4 1
M.canetti;lineage1 1
lineage4.6.1.1 3
lineage3;lineage4 1
lineage2.2.1.2 2
lineage6.1.3 1
lineage4.1.2.1;lineage4.9 1
lineage1.1.2;lineage6.2.3 1
lineage2.2 3
La1.7;lineage4.9 2
lineage3.1.1 2
lineage2.2.1;lineage4.9 1
lineage4.3.4.2.1 7
lineage4.9;lineage6.1.3 1
lineage4.3.2.1 2
lineage3 4
lineage4.3.3;lineage4.8 4
lineage4.1.2.1;lineage4.3.2 1
lineage4.5 1
La1.7.X-unk4;lineage4.9 1
lineage4.3 1
lineage4.1.1.3 5
lineage4.3.2 1
lineage4.9;lineage9 1
lineage2.2.2 3
lineage1.1.1.1 2
lineage4.1.1.1 1
lineage4.3.3 2
lineage4.1.1.3.1 1
La1;lineage4.9 1
lineage4.4.1.1 1
lineage4.1.2.1;lineage4.4.1.1 1
La1.3 1
La3;lineage4.9 1
La1.6 1
lineage4.1.2 1
La1.2 2
lineage2.2;lineage4 1
lineage4.4 1
La1.2;La1.8.1 1
lineage4.4.1.2 1
lineage4.9;lineage7 2
lineage4.1.1.2 1
La1.4 1
lineage4.2.1.1 1
spoligotype Counts
spoligotype Count
None 226
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR15508556 Other lineage4.3.4.1 None
ERR9786639 Sensitive lineage4.8 None
ERR2513405 Other lineage2.2.1 None
SRR1175474 Other lineage4.9 None
SRR6044952 Other lineage4.9 None
SRR6045002 RR-TB lineage4.9 None
SRR6045217 Sensitive lineage4.9 None
SRR1049725 Other lineage4.1.2.1;lineage4.4.1 None
SRR5163959 Other lineage4.9 None
SRR1173170 Other lineage4.9 None
SRR1140712 MDR-TB lineage4.6.1.2 None
SRR14782539 MDR-TB lineage4.2.1 None
SRR7645928 Other lineage4.7 None
SRR18549032 HR-TB lineage2.2.1.2;lineage7 None
SRR7645906 Other lineage2.2.1 None
ERR387051 Other lineage4.9 None
ERR1063856 HR-TB M.canetti;lineage4.9;lineage9 None
ERR502474 RR-TB lineage4.9 None
SRR5535933 Other lineage4.9 None
DRR184982 Other lineage2.2.1 None
SRR15316595 RR-TB lineage4.4.2 None
SRR6045053 Other lineage4 None
SRR6046299 Other lineage4.3.1;lineage4.9;lineage6 None
SRR6046577 Other lineage4.6.3;lineage4.9 None
SRR6046046 Other lineage4.9 None
SRR3675495 Other lineage2.1;lineage4.9 None
ERR4872322 Pre-XDR-TB lineage2.2.1 None
SRR5341341 Pre-XDR-TB lineage2.2.1 None
ERR108125 RR-TB lineage4.9 None
SRR5153833 Other lineage2.2.1 None
ERR4799025 Other lineage4.8 None
SRR6046492 Other lineage4.9 None
ERR1035138 MDR-TB lineage2.1;lineage4.9 None
SRR7755688 Pre-XDR-TB lineage4.2.1 None
SRR7645927 Other lineage4.8 None
ERR9786092 Sensitive lineage4.1.2.1;lineage6.3.1 None
ERR9786543 Sensitive lineage4.1.2.1 None
SRR5341330 Other lineage4.9 None
ERR212123 Other lineage4.9 None
SRR6046593 Other lineage4.9 None
ERR3468613 Other La1.8.1 None
ERR4769457 Other lineage4.9 None
SRR21469201 Other La1.7.1 None
ERR161039 HR-TB La3;lineage4.3.4 None
SRR15014655 Other M.canetti;lineage1 None
SRR16157123 Other lineage4.9 None
DRR184629 Other lineage2.2.1 None
ERR9121412 Sensitive lineage4.1.2.1 None
SRR7535047 RR-TB lineage4.6.1.1 None
SRR14782405 HR-TB lineage4.9 None
SRR1180446 Other lineage4.9 None
SRR3619841 Pre-XDR-TB lineage2.2.1 None
SRR1173740 Other lineage3;lineage4 None
SRR1172796 Sensitive lineage2.2.1.2 None
ERR2660539 Other lineage4.9 None
SRR16156697 RR-TB lineage2.2.1 None
SRR1184329 Other lineage4.9 None
ERR1023236 Other lineage6.1.3 None
SRR9971113 Other lineage2.2.1 None
ERR4769452 Other lineage4.9 None
SRR1062928 Other lineage4.1.2.1;lineage4.9 None
SRR1173185 Other lineage4.9 None
SRR21469202 Other La1.7.1 None
ERR6359082 Other lineage4.9 None
SRR1792011 Other La1.8.1 None
ERR3324368 RR-TB lineage1.1.2;lineage6.2.3 None
SRR5818452 Other lineage4.9 None
SRR11662690 HR-TB lineage4.9 None
SRR5341456 Other lineage4.9 None
ERR4811493 HR-TB lineage4.9 None
SRR20970016 Other lineage2.2 None
SRR28351488 MDR-TB lineage2.2.1 None
SRR9971122 MDR-TB lineage4.8 None
SRR1175491 MDR-TB lineage4.3.4.1 None
SRR7755649 MDR-TB lineage4.2.1 None
ERR212034 HR-TB La1.7;lineage4.9 None
SRR12634609 MDR-TB lineage3.1.1 None
SRR16156804 Sensitive lineage4.9 None
SRR1173310 Other lineage3.1.1 None
SRR12708406 HR-TB lineage2.2.1;lineage4.9 None
DRR473792 Sensitive lineage2.2.1 None
ERR4817915 Other lineage4.9 None
ERR323044 HR-TB lineage4.3.4.2.1 None
ERR3445504 Other lineage4.9;lineage6.1.3 None
ERR10762275 MDR-TB lineage4.2.1 None
SRR11349147 RR-TB lineage4.3.2.1 None
SRR1140716 Other lineage3 None
SRR1049677 MDR-TB lineage4.3.3;lineage4.8 None
SRR1175472 RR-TB lineage4.3.4.1 None
ERR9786926 Other lineage4.1.2.1;lineage4.3.2 None
ERR752229 Other lineage4.5 None
ERR1199132 Sensitive lineage4.6.1.1 None
SRR3675270 Other lineage4.9 None
SRR1181403 Other lineage4.9 None
SRR1049676 MDR-TB lineage4.3.3;lineage4.8 None
SRR12142339 HR-TB lineage2.2.1 None
SRR1792025 Other La1.8.1 None
SRR1180440 Other lineage4.9 None
SRR1140574 MDR-TB lineage4.3.3;lineage4.8 None
SRR3619764 Pre-XDR-TB lineage2.2.1 None
SRR7645977 MDR-TB lineage4.2.1 None
ERR502481 RR-TB lineage4.9 None
SRR3675520 Other La1.7.X-unk4;lineage4.9 None
SRR1140753 RR-TB lineage4.3.4.2.1 None
ERR12328189 Sensitive lineage2.2.1 None
SRR7755655 Other lineage4.1.2.1 None
SRR7240476 Other La1.8.1 None
SRR7645899 Other lineage2.2.1 None
SRR3618864 Pre-XDR-TB lineage2.2.1 None
SRR7645973 Other lineage4.3.4.1 None
ERR987765 Sensitive lineage4.6.1.1 None
ERR3275941 RR-TB lineage4.3 nl
SRR3601585 Pre-XDR-TB lineage2.2.1 None
SRR14782054 Other lineage4.9 None
ERR2229198 Sensitive lineage4.8 None
ERR970449 RR-TB lineage4.1.1.3 None
ERR4769450 Other lineage4.9 None
SRR7645901 MDR-TB lineage2.2.1 None
ERR4972567 MDR-TB lineage4.3.2 None
ERR161037 Other lineage4.9 None
SRR10315567 HR-TB lineage2.2.1 None
SRR9970981 RR-TB lineage4.3.2.1 None
SRR6789624 HR-TB lineage4.1.1.3 None
SRR6046720 HR-TB lineage4.9;lineage9 None
ERR2041726 MDR-TB lineage4.1.2.1 None
ERR4820030 Other lineage4.9 None
DRR188519 Other lineage4.4.2 None
SRR1062920 MDR-TB lineage4.3.3;lineage4.8 None
ERR5311077 Other La1.8.1 None
ERR4195369 Sensitive lineage4.1.2.1 None
SAMN02380982 MDR-TB lineage4.3.4.2.1 None
ERR3797062 RR-TB lineage4.9 None
DRR185024 Other lineage2.2.2 None
DRR185000 Other lineage1.1.1.1 None
SRR11342634 MDR-TB lineage4.8 None
DRR189072 Sensitive lineage2.2.1 None
SRR4033549 Other lineage2.2.2 None
ERR752012 HR-TB lineage1.1.1.1 None
SRR8758877 MDR-TB lineage4.1.1.1 None
SRR1792022 Other La1.8.1 None
ERR9992879 XDR-TB lineage4.3.3 None
SRR6046253 Sensitive lineage4.9 None
SRR9971112 Other lineage2.2.1 None
SRR7645972 MDR-TB lineage4.2.1 None
SRR1792012 Other La1.8.1 None
ERR2041725 MDR-TB lineage4.1.2.1 None
ERR4819863 RR-TB lineage4.9 None
ERR9992784 XDR-TB lineage2.2.2 None
SRR7070157 Other lineage4.1.1.3.1 None
ERR176560 HR-TB La1.7;lineage4.9 None
SRR9971333 MDR-TB lineage4.1.1.3 None
SRR10808730 Other lineage4.9 None
ERR4769497 Other La1;lineage4.9 None
ERR5917985 MDR-TB lineage2.2.1 None
ERR5979407 Other lineage3 None
SRR17567917 RR-TB lineage4.4.1.1 None
SRR1791725 Other La1.8.1 None
SRR1049726 Other lineage4.1.2.1;lineage4.4.1.1 None
SRR7646018 MDR-TB lineage4.2.1 None
ERR13285192 Sensitive lineage4.9 None
SRR1140736 Other lineage4.1.2.1 None
ERR3077969 Other La1.3 None
ERR181744 HR-TB La3;lineage4.9 None
SRR1049560 MDR-TB lineage4.3.4.2.1 None
SRR7755657 Other lineage4.8 None
SRR9971114 Other lineage2.2.1 None
SRR10993951 RR-TB La1.6 None
SRR1175127 Other lineage2.2.1.2 None
SRR21469200 Other La1.7.1 None
ERR4769554 RR-TB lineage4.9 None
ERR5162090 RR-TB lineage4.9 None
SRR11972425 Pre-XDR-TB lineage2.2.1 None
SRR22175249 Pre-XDR-TB lineage2.2.1 None
SRR9970980 HR-TB lineage4.1.2 None
SRR20969708 HR-TB lineage2.2 None
SRR6824501 Pre-XDR-TB lineage2.2.1 None
ERR4769427 Other La1.2 None
SRR7851312 Other La1.2 None
SRR20969731 Other lineage2.2.1 None
SRR6045548 Sensitive lineage4.9 None
SRR16156832 RR-TB lineage2.2;lineage4 None
SRR7755645 Pre-XDR-TB lineage2.2.1 None
ERR987707 MDR-TB lineage4.7 None
ERR2446566 Other lineage4.9 None
SRR16627752 RR-TB lineage4.4 None
SRR1062880 MDR-TB lineage4.6.1.2 None
SRR6045347 Other lineage4.9 None
SRR7240033 Other La1.2;La1.8.1 None
ERR502479 RR-TB lineage4.9 None
SRR6982141 Other lineage4.3.3 None
SAMN02380990 MDR-TB lineage4.6.1.2 None
ERR502473 RR-TB lineage4.9 None
ERR502478 RR-TB lineage4.9 None
SRR1049581 MDR-TB lineage4.6.1.2 None
ERR3283021 HR-TB lineage4.9 None
SRR1792024 Other La1.8.1 None
SRR5818397 Other lineage4.9 None
ERR13285191 Sensitive lineage4.9 None
ERR3468488 Other La1.8.1 None
ERR126597 HR-TB lineage4.4.1.2 None
ERR3797047 MDR-TB lineage4.9 None
SRR7240538 Other La1.7.1 None
SRR1175473 Other lineage4.9 None
ERR4831117 HR-TB lineage4.9;lineage7 None
ERR3797046 HR-TB lineage4.9 None
ERR3797065 RR-TB lineage4.9 None
ERR8975044 Other lineage4.1.1.2 None
ERR9786164 RR-TB lineage4.1.1.3 None
ERR4799513 HR-TB lineage2.2 None
ERR4819383 RR-TB lineage4.9 None
SRR16278274 Other La1.4 None
SRR1062871 RR-TB lineage4.3.4.2.1 None
SRR1196478 Other lineage4.9 None
SRR6785281 Other lineage4.2.1.1 None
ERR212114 Other lineage4.3.4.2.1 None
ERR1034647 MDR-TB lineage4.1.1.3 None
SRR1049582 MDR-TB lineage4.6.1.2 None
SRR7645971 Other lineage2.2.1 None
SRR1173770 Other lineage4.9 None
SRR9971046 MDR-TB lineage4.8 None
SRR1049559 MDR-TB lineage4.3.4.2.1 None
SRR1173281 Other lineage3 None
SRR5341365 Pre-XDR-TB lineage3 None
ERR3283055 HR-TB lineage4.9 None
SRR1181256 Other lineage4.9 None
SRR3675539 HR-TB lineage4.9;lineage7 None