EBG00000313325 - n.653C>T
Drug resistance types
53 Sensitive
72 RR-TB
29 HR-TB
68 MDR-TB
36 Pre-XDR-TB
1 XDR-TB
303 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.1.1.1 | 4 |
| lineage4.8 | 61 |
| lineage4.9 | 148 |
| lineage2.2.1 | 79 |
| lineage4.1.2.1 | 24 |
| lineage1.2.2 | 1 |
| lineage4.3.4.1 | 4 |
| lineage3 | 27 |
| La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | 1 |
| lineage4.6.1.2 | 3 |
| lineage4.3.4.1;lineage4.9 | 2 |
| lineage3.1.2.1;lineage4.9 | 1 |
| lineage1.2.2.2 | 1 |
| lineage4.4.1.1 | 9 |
| lineage3.1.1 | 10 |
| lineage6.1.3 | 2 |
| lineage4.2.1 | 9 |
| La1.3 | 3 |
| lineage3.1.1;lineage4.9 | 1 |
| M.canetti;lineage2.1;lineage4.9 | 1 |
| lineage4.3.1 | 1 |
| lineage4.6.2.2 | 1 |
| lineage4.3.4.2.1 | 9 |
| La1.8.1 | 11 |
| lineage4.3.3;lineage4.9 | 1 |
| lineage4.4.1.2 | 1 |
| lineage2.2.2 | 6 |
| lineage1.1.1.1 | 2 |
| lineage4.1.1.3 | 10 |
| lineage4.1.2.1;lineage4.9 | 2 |
| lineage5.1.1 | 1 |
| La1.4 | 1 |
| lineage4.1 | 1 |
| La1.7.1 | 2 |
| lineage4.1.1.3.1 | 3 |
| La1.2 | 2 |
| lineage4.2.2.2 | 5 |
| lineage2.2.1;lineage4.9 | 2 |
| lineage2.2.1.1 | 4 |
| lineage4.1.2.1;lineage4.4.1 | 1 |
| lineage4.9;lineage6.1.3 | 1 |
| lineage4.3.2.1 | 2 |
| lineage4.3.3;lineage4.8 | 4 |
| lineage4.4.2 | 6 |
| lineage4.5 | 2 |
| lineage4.6 | 1 |
| lineage3.1.2.1 | 5 |
| lineage4.1.1.2 | 1 |
| lineage2.2.1.2 | 2 |
| lineage2.2.1;lineage4 | 1 |
| lineage4.3.3 | 12 |
| lineage3.1.2.2 | 1 |
| lineage4.3.4.2 | 3 |
| lineage4.3.1.1 | 1 |
| lineage4 | 4 |
| lineage4.3.1;lineage4.9;lineage6 | 1 |
| lineage5 | 1 |
| La2 | 1 |
| lineage1.1.2 | 1 |
| lineage4.7 | 5 |
| lineage4.6.1.1 | 1 |
| lineage4.4.1.1.1 | 2 |
| lineage1.1.1 | 3 |
| lineage4.9;lineage7 | 1 |
| lineage2.2 | 3 |
| lineage4.2.2 | 2 |
| lineage4.1.2;lineage4.9 | 1 |
| lineage2;lineage4 | 1 |
| lineage4.2.1.1 | 3 |
| lineage3.1.2 | 1 |
| 1 | |
| La1;lineage4.9 | 1 |
| lineage4.1;lineage4.9 | 1 |
| lineage4.1.3 | 1 |
| lineage4.1.2.1;lineage4.4.1.1 | 1 |
| lineage4.8.1 | 2 |
| La1.6 | 1 |
| lineage4.3;lineage4.9 | 1 |
| lineage4.4 | 2 |
| lineage1.1.3.3 | 1 |
| lineage4.3.2 | 2 |
| lineage1.2.1.2 | 1 |
| lineage4.3 | 2 |
| lineage1.2.1.2.1 | 2 |
| lineage1.1.3.1 | 1 |
| lineage3;lineage4 | 2 |
| lineage4.9.1 | 1 |
| lineage2.2.1.2;lineage7 | 1 |
| lineage4.2.1.1;lineage4.3.3 | 1 |
| lineage1.2.1.1 | 1 |
| lineage4.1.2 | 2 |
| lineage6.1.2 | 1 |
| lineage2.2;lineage4 | 1 |
| lineage2.2;lineage4.9 | 1 |
| lineage4.6.3;lineage4.9 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 562 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR11342651 | MDR-TB | lineage4.1.1.1 | None | ERR978748 | Other | lineage4.8 | None | SRR5341330 | Other | lineage4.9 | None | ERR978755_ERR978756_ERR978754_ERR978757 | RR-TB | lineage4.8 | None | SRR11972417 | MDR-TB | lineage2.2.1 | None | SRR6045347 | Other | lineage4.9 | None | SRR7069082 | Other | lineage4.1.2.1 | None | ERR4818126 | Other | lineage1.2.2 | None | ERR867554 | Other | lineage4.3.4.1 | None | SRR7070293 | Other | lineage4.8 | None | SRR5818458 | Other | lineage4.9 | None | SRR6046020 | Other | lineage3 | None | SRR6046482 | Other | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | None | SRR19304104 | Other | lineage4.8 | None | SRR3675245 | Other | lineage4.1.2.1 | None | SRR5818426 | Other | lineage4.9 | None | ERR4769457 | Other | lineage4.9 | None | SAMN02380990 | MDR-TB | lineage4.6.1.2 | None | ERR10796572 | Other | lineage4.3.4.1;lineage4.9 | None | SRR5818413 | Sensitive | lineage4.9 | None | SRR18003047 | MDR-TB | lineage2.2.1 | None | ERR2027290 | Other | lineage3.1.2.1;lineage4.9 | None | SRR6046484 | Other | lineage1.2.2.2 | None | SRR15316557 | Sensitive | lineage2.2.1 | None | SRR7070329 | Other | lineage3 | None | ERR9896153 | RR-TB | lineage4.4.1.1 | None | SRR18003046 | MDR-TB | lineage2.2.1 | None | SRR3675509 | Other | lineage4.9 | None | SRR7069669 | Other | lineage3.1.1 | None | ERR3276144 | Other | lineage3 | nl | SRR6045496 | Other | lineage6.1.3 | None | ERR867541 | MDR-TB | lineage4.2.1 | None | ERR4769436 | Other | La1.3 | None | ERR171142 | Other | lineage3.1.1;lineage4.9 | None | ERR4596902 | MDR-TB | lineage3 | None | ERR10796558 | Sensitive | lineage4.3.4.1;lineage4.9 | None | SRR6045290 | RR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR978767 | RR-TB | lineage4.8 | None | ERR4829039 | RR-TB | lineage4.3.1 | None | ERR4819528 | RR-TB | lineage3 | None | ERR4819641 | Other | lineage4.6.2.2 | None | SRR11349203 | MDR-TB | lineage4.4.1.1 | None | ERR978747 | Other | lineage4.8 | None | SAMN02380982 | MDR-TB | lineage4.3.4.2.1 | None | ERR3468488 | Other | La1.8.1 | None | SRR2024953 | MDR-TB | lineage2.2.1 | cn | SRR14334194 | Pre-XDR-TB | lineage2.2.1 | None | ERR867522 | Pre-XDR-TB | lineage2.2.1 | None | ERR4818831 | Other | lineage3 | None | SRR7236330 | Other | La1.8.1 | None | SRR6832644 | Other | lineage4.3.3;lineage4.9 | None | ERR126597 | HR-TB | lineage4.4.1.2 | None | ERR2886463 | Sensitive | lineage2.2.1 | None | ERR10796578 | Other | lineage2.2.1 | None | SRR16156697 | RR-TB | lineage2.2.1 | None | ERR911929 | Other | lineage4.8 | None | SRR18002875 | MDR-TB | lineage2.2.2 | None | ERR752012 | HR-TB | lineage1.1.1.1 | None | SRR11342647 | MDR-TB | lineage4.1.1.3 | None | SRR1062928 | Other | lineage4.1.2.1;lineage4.9 | None | ERR4819383 | RR-TB | lineage4.9 | None | ERR502517 | Other | lineage5.1.1 | None | SRR1792022 | Other | La1.8.1 | None | SRR1173185 | Other | lineage4.9 | None | SRR16278274 | Other | La1.4 | None | SRR7070153 | Sensitive | lineage4.1.2.1 | None | SRR5818408 | Other | lineage4.9 | None | ERR10796598 | Other | lineage4.9 | None | ERR4815502 | Other | lineage4.1 | None | SRR21469202 | Other | La1.7.1 | None | DRR034348 | Other | lineage2.2.1 | None | ERR867525 | Pre-XDR-TB | lineage2.2.1 | None | ERR212114 | Other | lineage4.3.4.2.1 | None | ERR867573 | Other | lineage4.9 | None | ERR4815815 | Sensitive | lineage4.9 | None | ERR4819863 | RR-TB | lineage4.9 | None | ERR978754 | RR-TB | lineage4.8 | None | SRR11662690 | HR-TB | lineage4.9 | None | SAMEA3501070 | RR-TB | lineage4.8 | None | SRR5341456 | Other | lineage4.9 | None | SAMEA3501052 | RR-TB | lineage4.8 | None | SRR6046442 | Other | lineage3 | None | SRR7070157 | Other | lineage4.1.1.3.1 | None | SRR5818440 | Other | lineage4.9 | None | SRR9971333 | MDR-TB | lineage4.1.1.3 | None | SRR1049559 | MDR-TB | lineage4.3.4.2.1 | None | ERR10796635 | Other | lineage4.8 | None | ERR4769418 | Other | La1.2 | None | SRR1175491 | MDR-TB | lineage4.3.4.1 | None | SRR7755649 | MDR-TB | lineage4.2.1 | None | ERR10796555 | Other | lineage4.1.2.1 | None | ERR4821718 | Sensitive | lineage4.2.2.2 | gb | SRR1181256 | Other | lineage4.9 | None | SRR7069391 | Other | lineage4.9 | None | SRR18003031 | HR-TB | lineage2.2.1 | None | SRR18003045 | Other | lineage2.2.1 | None | SRR19303907 | Other | lineage4.8 | None | ERR2513405 | Other | lineage2.2.1 | None | SRR12708406 | HR-TB | lineage2.2.1;lineage4.9 | None | SRR18911231 | Sensitive | lineage4.1.1.3 | None | SRR7131287 | Other | lineage2.2.1.1 | None | ERR867544 | Other | lineage4.9 | None | SRR6045217 | Sensitive | lineage4.9 | None | SRR1049725 | Other | lineage4.1.2.1;lineage4.4.1 | None | ERR2503533 | Other | lineage4.1.2.1 | fi | SRR5818411 | RR-TB | lineage4.9 | None | ERR10796591 | Other | lineage4.9 | None | SRR5818423 | RR-TB | lineage4.9 | None | SRR5818453 | Sensitive | lineage4.9 | None | SRR5818459 | Other | lineage4.9 | None | SRR18002947 | MDR-TB | lineage2.2.1 | None | ERR3445504 | Other | lineage4.9;lineage6.1.3 | None | ERR4596944 | MDR-TB | lineage3.1.1 | None | SRR21240055 | Other | lineage4.1.2.1 | None | ERR4816322 | Other | lineage4.9 | None | SRR11349147 | RR-TB | lineage4.3.2.1 | None | SRR1140716 | Other | lineage3 | None | SRR1049677 | MDR-TB | lineage4.3.3;lineage4.8 | None | SRR1175472 | RR-TB | lineage4.3.4.1 | None | SRR14782539 | MDR-TB | lineage4.2.1 | None | SRR12062493 | Pre-XDR-TB | lineage4.4.2 | None | ERR4816762 | Sensitive | lineage4.9 | None | ERR4816868 | Other | lineage4.4.1.1 | None | ERR10796560 | Other | lineage4.9 | None | ERR4024582 | MDR-TB | lineage4.1.2.1 | None | ERR4819007 | Other | lineage2.2.1 | None | SRR18002874 | MDR-TB | lineage2.2.1 | None | SRR7131149 | Pre-XDR-TB | lineage4.8 | None | ERR752229 | Other | lineage4.5 | None | SRR7645906 | Other | lineage2.2.1 | None | SRR1049675 | HR-TB | lineage2.2.1 | None | SRR6044936 | Other | lineage4.6 | None | ERR4820798 | Other | lineage3.1.2.1 | gb | ERR10796562 | Other | lineage4.3.4.1 | None | SRR7069922 | Other | lineage2.2.1 | None | SRR7069473 | Other | lineage4.1.1.2 | None | ERR978746_ERR978747_ERR978748 | RR-TB | lineage4.8 | None | ERR911929_ERR911930 | Other | lineage4.8 | None | ERR867527 | Pre-XDR-TB | lineage2.2.1 | None | SRR1175127 | Other | lineage2.2.1.2 | None | ERR978765 | RR-TB | lineage4.8 | None | SRR7069931 | Other | lineage4.2.2.2 | None | ERR867568 | Other | lineage2.2.1;lineage4 | None | SRR11342640 | MDR-TB | lineage4.3.3 | None | SRR1180440 | Other | lineage4.9 | None | SRR18003042 | Other | lineage2.2.1 | None | ERR4814994 | HR-TB | lineage2.2.1 | gb | SRR3619764 | Pre-XDR-TB | lineage2.2.1 | None | SRR6046440 | Other | lineage3.1.2.2 | None | SRR21469200 | Other | La1.7.1 | None | ERR502474 | RR-TB | lineage4.9 | None | SRR6045124 | Other | lineage4.9 | None | SRR7131236 | Other | lineage4.3.4.2 | None | SRR1173719 | Other | lineage4.9 | None | ERR4586795 | Other | La1.8.1 | None | SRR1140753 | RR-TB | lineage4.3.4.2.1 | None | ERR4822138 | Other | lineage4.1.2.1 | None | SRR22424765 | HR-TB | lineage4.8 | None | SRR7069837 | Sensitive | lineage4.1.1.3 | None | SRR5007167 | RR-TB | lineage4.1.1.3.1 | None | ERR4769554 | RR-TB | lineage4.9 | None | SRR11342669 | Other | lineage4.8 | None | ERR4815022 | Other | lineage3.1.2.1 | None | ERR5162090 | RR-TB | lineage4.9 | None | SRR11972425 | Pre-XDR-TB | lineage2.2.1 | None | SRR6046616 | Other | lineage4.3.1.1 | None | SRR6045843 | Other | lineage4.2.2.2 | None | SRR6046210 | Other | lineage4.9 | None | SRR6982239 | Sensitive | lineage4.1.1.3 | None | SRR5818394 | Other | lineage4.9 | None | SRR6045053 | Other | lineage4 | None | SRR6046299 | Other | lineage4.3.1;lineage4.9;lineage6 | None | SRR7617847 | Other | La1.8.1 | None | SRR5818445 | Other | lineage4.9 | None | SRR6046593 | Other | lineage4.9 | None | SRR5818386 | Other | lineage4.9 | None | ERR4816852 | Other | lineage4.9 | None | ERR4816967 | Other | lineage5 | None | ERR978693 | Other | lineage4.8 | None | SRR13888750 | Other | La2 | None | SRR16156188 | Sensitive | lineage4.9 | None | SRR22424787 | Sensitive | lineage4.9 | None | ERR4769495 | Other | La1.3 | None | ERR4769450 | Other | lineage4.9 | None | ERR4821769 | Other | lineage4.1.2.1 | None | ERR911930 | Other | lineage4.8 | None | ERR502473 | RR-TB | lineage4.9 | None | ERR502478 | RR-TB | lineage4.9 | None | SRR11342653 | MDR-TB | lineage2.2.1 | None | SRR18003007 | MDR-TB | lineage4.5 | None | ERR2041726 | MDR-TB | lineage4.1.2.1 | None | SAMEA3450033 | Other | lineage4.8 | None | SRR11342636 | MDR-TB | lineage4.3.3 | None | ERR867523 | Pre-XDR-TB | lineage2.2.1 | None | SRR20969542 | Other | lineage4.4.2 | None | ERR4814639 | HR-TB | lineage4.9 | None | ERR4820030 | Other | lineage4.9 | None | SRR5818421 | Sensitive | lineage4.9 | None | SRR5818464 | Other | lineage4.9 | None | ERR4816571 | Sensitive | lineage1.1.2 | None | SRR6046359 | Other | lineage4.7 | None | SRR5818405 | Other | lineage4.9 | None | SRR5007193 | RR-TB | lineage4.1.1.3.1 | None | ERR4820193 | Other | lineage3 | None | SRR5818437 | RR-TB | lineage4.9 | None | ERR4769493 | Other | lineage4.9 | None | SRR7535047 | RR-TB | lineage4.6.1.1 | None | SRR6046250 | Other | lineage4.9 | None | ERR2228900 | Other | lineage4.8 | None | SRR7068938 | Sensitive | lineage3.1.1 | None | DRR185024 | Other | lineage2.2.2 | None | SRR11342696 | MDR-TB | lineage4.4.1.1.1 | None | ERR4817554 | Other | lineage1.1.1 | None | SRR1180446 | Other | lineage4.9 | None | SRR6045158 | Other | lineage4.9 | None | SRR5818427 | HR-TB | lineage4.9 | None | SRR11342644 | MDR-TB | lineage4.4.1.1.1 | None | SRR3619841 | Pre-XDR-TB | lineage2.2.1 | None | SRR18002935 | Pre-XDR-TB | lineage2.2.1 | None | SRR14801652 | HR-TB | lineage4.3.3 | None | ERR3275615 | Sensitive | lineage4.4.1.1 | nl | ERR4831117 | HR-TB | lineage4.9;lineage7 | None | SRR1184329 | Other | lineage4.9 | None | ERR10796553 | Other | lineage4.9 | None | SRR5818398 | Other | lineage4.9 | None | SRR5818409 | Other | lineage4.9 | None | SRR18003032 | Other | lineage2.2.1 | None | ERR2514215 | Other | lineage2.2.1 | gb | ERR978734_ERR978733_ERR978735 | RR-TB | lineage4.8 | None | ERR4769452 | Other | lineage4.9 | None | ERR9786164 | RR-TB | lineage4.1.1.3 | None | ERR4799513 | HR-TB | lineage2.2 | None | DRR188816 | Sensitive | lineage4.2.2 | None | SRR5818444 | Sensitive | lineage4.9 | None | ERR9992879 | XDR-TB | lineage4.3.3 | None | SRR3675527 | Other | lineage4.9 | None | SRR6982246 | Sensitive | lineage4.1.2;lineage4.9 | None | ERR1023502 | MDR-TB | lineage2;lineage4 | None | SRR7645972 | MDR-TB | lineage4.2.1 | None | SRR6785281 | Other | lineage4.2.1.1 | None | SRR7131195 | Other | lineage2.2.1 | None | ERR6359082 | Other | lineage4.9 | None | SRR1062918 | Other | lineage3 | None | ERR5979454 | Pre-XDR-TB | lineage3 | None | SRR11342664 | MDR-TB | lineage2.2.2 | None | ERR2027250 | Other | lineage3.1.2 | None | SRR19303899 | Other | lineage3 | None | SRR20970016 | Other | lineage2.2 | None | ERR10796577 | Other | lineage4.9 | None | SAMEA3501046 | RR-TB | lineage4.8 | None | SRR1735598 | RR-TB | lineage4.9 | None | SRR18003023 | Other | lineage2.2.1 | None | ERR4821288 | Other | lineage4.7 | None | SAMEA3501067 | RR-TB | lineage4.8 | None | SRR1049582 | MDR-TB | lineage4.6.1.2 | None | SRR5818469 | Other | lineage4.9 | None | ERR4817069 | RR-TB | None | SRR7070134 | Other | lineage3.1.1 | None | ERR978757 | RR-TB | lineage4.8 | None | SRR9971046 | MDR-TB | lineage4.8 | None | SRR9971122 | MDR-TB | lineage4.8 | None | SRR1173770 | Other | lineage4.9 | None | ERR4769497 | Other | La1;lineage4.9 | None | SRR13423546 | Other | lineage4.4.2 | None | SRR5341365 | Pre-XDR-TB | lineage3 | None | ERR10796629 | Other | lineage4.1;lineage4.9 | None | SRR11342671 | RR-TB | lineage4.1.3 | None | SRR11342673 | RR-TB | lineage4.3.4.2 | None | SRR12062533 | Pre-XDR-TB | lineage2.2.1.1 | None | SRR12634609 | MDR-TB | lineage3.1.1 | None | ERR10796632 | Other | lineage4.3.3 | None | ERR978694 | Other | lineage4.8 | None | SRR12420628 | MDR-TB | lineage2.2.1 | None | SRR7070195 | Sensitive | lineage3.1.2.1 | None | ERR9786639 | Sensitive | lineage4.8 | None | SRR1049726 | Other | lineage4.1.2.1;lineage4.4.1.1 | None | SRR6045002 | RR-TB | lineage4.9 | None | SRR6045909 | Other | lineage4.8.1 | None | SRR5818389 | Other | lineage4.9 | None | SRR5818396 | Other | lineage4.9 | None | SRR7646018 | MDR-TB | lineage4.2.1 | None | SRR5818422 | Other | lineage4.9 | None | SRR6045986 | Other | lineage3 | None | ERR978727 | Other | lineage4.8 | None | ERR4815310 | Other | lineage2.2.1;lineage4.9 | None | SRR18003030 | Pre-XDR-TB | lineage2.2.1 | None | SRR5818439 | Sensitive | lineage4.9 | None | ERR323044 | HR-TB | lineage4.3.4.2.1 | None | SRR5163959 | Other | lineage4.9 | None | SRR18002930 | MDR-TB | lineage2.2.1 | None | ERR978751 | Other | lineage4.8 | None | SAMEA3501063 | RR-TB | lineage4.8 | None | SRR1049560 | MDR-TB | lineage4.3.4.2.1 | None | SRR5007204 | Other | lineage4.1.2.1 | None | SRR6045359 | Sensitive | lineage4.9 | None | ERR4808964 | RR-TB | lineage2.2.1 | None | SRR5818404 | Other | lineage4.9 | None | ERR4818646 | Sensitive | lineage4.1.2.1 | None | SRR10993951 | RR-TB | La1.6 | None | SRR1181403 | Other | lineage4.9 | None | ERR4769417 | Pre-XDR-TB | lineage4.9 | None | SRR18003015 | MDR-TB | lineage2.2.1 | None | SRR5818442 | Sensitive | lineage4.9 | None | SRR5818414 | Other | lineage4.9 | None | ERR4815783 | Other | lineage4.1.2.1 | gb | SRR10315556 | Sensitive | lineage2.2.1 | None | SRR10315558 | Sensitive | lineage2.2.1 | None | SRR1049676 | MDR-TB | lineage4.3.3;lineage4.8 | None | ERR036207 | Other | lineage4.3;lineage4.9 | None | SRR18003013 | Pre-XDR-TB | lineage4.4.2 | None | SRR1140574 | MDR-TB | lineage4.3.3;lineage4.8 | None | ERR867524 | Pre-XDR-TB | lineage4.2.1 | None | ERR502481 | RR-TB | lineage4.9 | None | SRR21727760 | Other | lineage2.2.1 | None | SRR5341306 | Pre-XDR-TB | lineage4.4 | None | SRR5818446 | Other | lineage4.9 | None | ERR978694_ERR978693 | Other | lineage4.8 | None | SRR3675265 | Other | lineage4 | None | SRR3675565 | Other | lineage4 | None | SRR5535933 | Other | lineage4.9 | None | ERR10796564 | Other | lineage4.3.3 | None | ERR978756 | Other | lineage4.8 | None | SRR7755655 | Other | lineage4.1.2.1 | None | SRR15316595 | RR-TB | lineage4.4.2 | None | SRR20969708 | HR-TB | lineage2.2 | None | ERR10796626 | Other | lineage4.1.2.1 | None | SRR6046046 | Other | lineage4.9 | None | SRR7131123 | Other | lineage4.8 | None | SRR6046117 | Other | lineage4.9 | None | ERR10796589 | Other | lineage4.9 | None | ERR3806588 | Other | lineage6.1.3 | None | SRR7069835 | Other | lineage2.2.1 | None | SRR7131068 | Other | lineage4.8 | None | SRR5818432 | MDR-TB | lineage4.9 | None | SRR5818456 | Other | lineage4.9 | None | ERR4769427 | Other | La1.2 | None | SRR5341341 | Pre-XDR-TB | lineage2.2.1 | None | SRR18003038 | Other | lineage2.2.1 | None | SRR11342660 | MDR-TB | lineage2.2.1 | None | ERR4829360 | Sensitive | lineage4.7 | None | SRR6982141 | Other | lineage4.3.3 | None | SRR7645901 | MDR-TB | lineage2.2.1 | None | ERR4798769 | Other | lineage1.1.3.3 | None | SRR10315567 | HR-TB | lineage2.2.1 | None | SRR3675582 | Other | lineage4.9 | None | SRR9970981 | RR-TB | lineage4.3.2.1 | None | ERR867572 | Other | lineage4.9 | None | SRR15316554 | Sensitive | lineage2.2.1 | None | SRR12062542 | Pre-XDR-TB | lineage2.2.1 | None | SRR5818391 | Other | lineage4.9 | None | SRR18003012 | Pre-XDR-TB | lineage2.2.1 | None | SRR5818402 | Other | lineage4.9 | None | SRR5818431 | Sensitive | lineage4.9 | None | SRR5818449 | MDR-TB | lineage4.9 | None | SRR5818462 | Other | lineage4.9 | None | SRR5818466 | Other | lineage4.9 | None | ERR9117805 | Other | lineage4.3.2 | None | DRR184629 | Other | lineage2.2.1 | None | DRR188519 | Other | lineage4.4.2 | None | SRR20969475 | Other | lineage1.2.1.2 | None | SRR6046376 | Other | lineage3 | None | SRR5341267 | Pre-XDR-TB | lineage3 | None | ERR9117788 | Other | lineage3 | None | SRR7131145 | Other | lineage4.1.2.1 | None | SRR5818397 | Other | lineage4.9 | None | SRR5818429 | Sensitive | lineage4.9 | None | SRR5818448 | Other | lineage4.9 | None | SRR1062920 | MDR-TB | lineage4.3.3;lineage4.8 | None | ERR10796593 | Other | lineage4.3 | None | SRR11342698 | RR-TB | lineage4.4.1.1 | None | SRR6152681 | Sensitive | lineage1.2.1.2.1 | ca | SRR18002881 | Pre-XDR-TB | lineage2.2.1 | None | ERR4814905 | Sensitive | lineage4.8 | gb | ERR4814976 | Other | lineage4.9 | None | ERR5311077 | Other | La1.8.1 | None | ERR4813263 | MDR-TB | lineage4.8 | None | ERR978766 | RR-TB | lineage4.8 | None | ERR2446154 | Sensitive | lineage4.4.1.1 | nl | ERR978767_ERR978765_ERR978766 | RR-TB | lineage4.8 | None | ERR4821616 | Other | lineage1.1.3.1 | None | ERR3797062 | RR-TB | lineage4.9 | None | ERR4819546 | HR-TB | lineage3 | None | ERR1023509 | Other | lineage4.9 | None | SRR5818425 | Other | lineage4.9 | None | SRR14782405 | HR-TB | lineage4.9 | None | SRR6044904 | Other | lineage3 | None | DRR185000 | Other | lineage1.1.1.1 | None | SRR10614047 | Sensitive | lineage4.9 | None | SRR9971065 | RR-TB | lineage2.2.1 | None | SRR1173740 | Other | lineage3;lineage4 | None | SRR1172796 | Sensitive | lineage2.2.1.2 | None | SRR18002994 | MDR-TB | lineage4.2.2 | None | SRR7070154 | Other | lineage4.4.1.1 | None | ERR3797046 | HR-TB | lineage4.9 | None | ERR978735 | Other | lineage4.8 | None | SRR8758877 | MDR-TB | lineage4.1.1.1 | None | ERR502470 | RR-TB | lineage4.9 | None | ERR037504 | Other | lineage4.9.1 | None | ERR867571 | Other | lineage4.9 | None | ERR978726_ERR978727 | RR-TB | lineage4.8 | None | SRR9971112 | Other | lineage2.2.1 | None | SRR1062871 | RR-TB | lineage4.3.4.2.1 | None | SRR1196478 | Other | lineage4.9 | None | SRR18002998 | Pre-XDR-TB | lineage2.2.2 | None | ERR2041725 | MDR-TB | lineage4.1.2.1 | None | ERR1034647 | MDR-TB | lineage4.1.1.3 | None | SRR5818452 | Other | lineage4.9 | None | ERR4819491 | Other | lineage4.1.2.1 | None | ERR4811493 | HR-TB | lineage4.9 | None | ERR10796636 | Other | lineage4.1.2.1 | None | SRR5341412 | Pre-XDR-TB | lineage3 | None | SRR7645971 | Other | lineage2.2.1 | None | ERR4819175 | Other | lineage4.1.1.3 | gb | SRR11342646 | HR-TB | lineage3 | None | SRR1173281 | Other | lineage3 | None | SRR18003024 | RR-TB | lineage2.2.1 | None | ERR3283055 | HR-TB | lineage4.9 | None | ERR978734 | RR-TB | lineage4.8 | None | SRR17567917 | RR-TB | lineage4.4.1.1 | None | SRR1791725 | Other | La1.8.1 | None | SRR18003002 | MDR-TB | lineage2.2.1 | None | SRR5431730 | Other | La1.8.1 | None | ERR4820019 | Other | lineage4.3.4.2.1 | None | SRR5818424 | Sensitive | lineage4.9 | None | SRR5818388 | Other | lineage4.9 | None | SRR5818428 | Sensitive | lineage4.9 | None | SRR5818455 | Sensitive | lineage4.9 | None | SRR5818470 | Other | lineage4.9 | None | ERR10796597 | Other | lineage4.3.3 | None | SRR15316561 | Sensitive | lineage2.2.1 | None | SRR11462861 | Other | La1.8.1 | None | SRR1173310 | Other | lineage3.1.1 | None | SRR18002981 | Other | lineage2.2.1 | None | SRR22424778 | RR-TB | lineage2.2.1.1 | None | ERR867570 | RR-TB | lineage4.9 | None | ERR10796592 | Other | lineage4.9 | None | ERR10796627 | Other | lineage4.1.2.1;lineage4.9 | None | SRR1140736 | Other | lineage4.1.2.1 | None | SRR7069097 | Other | lineage3.1.2.1 | None | ERR3077969 | Other | La1.3 | None | ERR3275190 | Other | lineage3 | nl | ERR4798823 | HR-TB | lineage4 | None | ERR4819314 | Other | lineage1.1.1 | None | ERR10762495 | MDR-TB | lineage2.2.1 | None | SRR1049674 | HR-TB | lineage2.2.1 | None | SRR1173170 | Other | lineage4.9 | None | SRR11342662 | MDR-TB | lineage4.8.1 | None | SRR1140712 | MDR-TB | lineage4.6.1.2 | None | SRR7645928 | Other | lineage4.7 | None | ERR2514179 | Sensitive | lineage3.1.1 | gb | SRR18549032 | HR-TB | lineage2.2.1.2;lineage7 | None | SRR7755657 | Other | lineage4.8 | None | SRR5818406 | Other | lineage4.9 | None | SRR9971114 | Other | lineage2.2.1 | None | ERR978755 | RR-TB | lineage4.8 | None | ERR978761 | Other | lineage4.8 | None | SRR7236399 | Other | La1.8.1 | None | ERR867542 | HR-TB | lineage4.2.1.1;lineage4.3.3 | None | ERR2027209 | MDR-TB | lineage1.2.1.1 | None | ERR10796565 | Other | lineage4.9 | None | SRR18003004 | Pre-XDR-TB | lineage2.2.2 | None | SRR18003009 | MDR-TB | lineage2.2.1 | None | SRR7070223 | HR-TB | lineage3 | None | SRR18002891 | MDR-TB | lineage2.2.1 | None | SRR5818395 | Sensitive | lineage4.9 | None | SRR11342658 | RR-TB | lineage4.1.2 | None | SRR12142339 | HR-TB | lineage2.2.1 | None | SRR11342649 | MDR-TB | lineage4.3.3 | None | SRR19303820 | RR-TB | lineage4.8 | None | SRR14801325 | Pre-XDR-TB | lineage4.2.1 | None | SRR5818393 | Other | lineage4.9 | None | SRR5818407 | Sensitive | lineage4.9 | None | SRR6046839 | Other | lineage4.9 | None | SRR18002974 | Other | lineage2.2.1 | None | SRR11349211 | Pre-XDR-TB | lineage4.3.3 | None | ERR10796640 | Other | lineage4.1.2.1 | None | SRR18002933 | Other | lineage2.2.1 | None | ERR10796628 | Other | lineage4.3.3 | None | SRR5818415 | Sensitive | lineage4.9 | None | SRR7069800 | Other | lineage3.1.2.1 | None | SAMEA3501073 | RR-TB | lineage4.8 | None | ERR4821172 | RR-TB | lineage4.9 | None | SRR7645899 | Other | lineage2.2.1 | None | ERR4817667 | HR-TB | lineage4.8 | None | ERR10796633 | Other | lineage4.3.4.2 | None | SRR18909918 | Other | lineage2.2.1.1 | None | SRR3618864 | Pre-XDR-TB | lineage2.2.1 | None | ERR978752 | Other | lineage4.8 | None | SRR5818385 | Other | lineage4.9 | None | SRR5818400 | Other | lineage4.9 | None | ERR867575 | Other | lineage4.9 | None | ERR5917972 | MDR-TB | lineage4.4.1.1 | za | ERR867574 | Other | lineage4.9 | None | SRR5818460 | Other | lineage4.9 | None | SRR6045603 | Other | lineage4.1.1.3 | None | ERR4799025 | Other | lineage4.8 | None | SRR6046492 | Other | lineage4.9 | None | SRR7131121 | Other | lineage4.3.3 | None | SRR7131147 | Other | lineage4.1.2.1 | None | SRR7755688 | Pre-XDR-TB | lineage4.2.1 | None | SRR16156775 | Other | lineage4.9 | None | SRR14782054 | Other | lineage4.9 | None | SRR5818399 | Sensitive | lineage4.9 | None | ERR978750_ERR978752_ERR978751 | RR-TB | lineage4.8 | None | SRR5818647 | Other | lineage4.3.4.2.1 | None | ERR2446566 | Other | lineage4.9 | None | SRR19304094 | Other | lineage6.1.2 | None | ERR4769433 | RR-TB | lineage4.9 | None | SRR6044983 | Other | lineage3.1.1 | None | SRR20969731 | Other | lineage2.2.1 | None | SRR6045548 | Sensitive | lineage4.9 | None | SRR12006547 | Sensitive | lineage1.2.1.2.1 | None | SRR11342642 | MDR-TB | lineage4.1.1.1 | None | ERR2027257 | Other | lineage4.1.2.1 | None | ERR4818272 | Other | lineage4.3.2 | None | SRR11972369 | Pre-XDR-TB | lineage2.2.1 | None | SRR16156832 | RR-TB | lineage2.2;lineage4 | None | ERR4815550 | Other | lineage2.2;lineage4.9 | None | SRR21658550 | Other | lineage1.1.1 | None | ERR4817434 | Other | lineage3 | None | SRR7755645 | Pre-XDR-TB | lineage2.2.1 | None | ERR978761_ERR978762_ERR978760 | RR-TB | lineage4.8 | None | SRR7070521 | Other | lineage4.2.1.1 | None | ERR4596904 | MDR-TB | lineage3.1.1 | None | SRR7645927 | Other | lineage4.8 | None | ERR867567 | RR-TB | lineage3 | None | ERR978762 | Other | lineage4.8 | None | SRR18002984 | MDR-TB | lineage2.2.2 | None | SRR16627752 | RR-TB | lineage4.4 | None | SRR3675230 | Other | lineage3;lineage4 | None | SRR6046577 | Other | lineage4.6.3;lineage4.9 | None | SRR7240476 | Other | La1.8.1 | None | SRR3675552 | Other | lineage4.9 | None | SRR7755654 | Pre-XDR-TB | lineage4.2.1 | None | ERR10796571 | Other | lineage4.9 | None | SRR7070320 | Other | lineage4.8 | None | ERR10796634 | Other | lineage4.7 | None | SRR6397640 | Other | lineage4.2.1.1 | None | ERR4457829 | MDR-TB | lineage4.1.2.1 | None | DRR184982 | Other | lineage2.2.1 | None | SRR11342687 | RR-TB | lineage4.2.2.2 | None | ERR4872322 | Pre-XDR-TB | lineage2.2.1 | None | SAMEA3501015 | Other | lineage4.8 | None | ERR867526 | MDR-TB | lineage2.2.1 | None | ERR867538 | Other | lineage4.2.2.2 | None | ERR10796559 | Other | lineage4.9 | None | ERR9117740 | Other | lineage3.1.1 | None | SRR5818435 | Sensitive | lineage4.9 | None | ERR867569 | Other | lineage4.9 | None | ERR10796581 | Other | lineage4.1.2 | None | ERR3275941 | RR-TB | lineage4.3 | nl | SRR3601585 | Pre-XDR-TB | lineage2.2.1 | None | SRR18002963 | Other | lineage2.2.1 | None | ERR10796620 | Other | lineage4.1.1.1 | None | SRR6045267 | RR-TB | lineage4.8 | None | ERR067712 | Sensitive | lineage4.9 | None | ERR2446509 | Other | lineage3 | nl | ERR4821962 | Other | lineage4.1.1.3 | gb | SAMEA3501065 | RR-TB | lineage4.8 | None | SRR18002937 | Other | lineage2.2.1 | None | ERR4818561 | Sensitive | lineage4.9 | None | SRR11342686 | MDR-TB | lineage4.8 | None |
|---|
