EBG00000313325 - n.653C>T


Drug resistance types
71 Sensitive 108 RR-TB 68 HR-TB 92 MDR-TB 56 Pre-XDR-TB 1 XDR-TB 480 Other
lineage Counts
lineage Count
38
lineage4 32
lineage4.8 64
lineage4.4.1.1 23
lineage4.6.2.2 11
lineage4.6.1.2 6
lineage4.1.2.1 59
lineage2.2 8
lineage3 75
lineage4.3.4.2 9
lineage4.5 7
lineage1 2
lineage4.9 150
lineage2.2.1 109
lineage3.1.2.1 7
lineage4.3.3 23
lineage4.1 4
lineage5.1.3 1
lineage4.1.1 9
lineage1.1.2 13
lineage4.3.2 5
lineage4.7 10
lineage4.2.2 3
lineage1.1.3 4
lineage4.1.1.3.1 7
lineage6 3
lineage4.3.4.1 7
lineage1.1.1 3
lineage4.6.1 3
lineage1.2.2.2 4
lineage4.1.1.3 12
lineage3.1.1 11
lineage4.3.4.2.1 12
lineage3.1.2 4
lineage4.2.1 10
lineage4.4 3
lineage4.1.2 6
lineage4.3.1.1 3
La1.8.1 12
lineage6.1.3 1
lineage4.3.2.1 4
lineage4.1.3 1
lineage5 2
lineage4.1.1.2 1
lineage4.2.2.2 5
lineage1.1.3.1 3
lineage4.8.2 3
lineage3.1.3 4
lineage3.1.2.2 3
lineage4.2.2.2;lineage3 1
lineage1.1.3.3 2
lineage4.8.1 1
lineage4.3.1 1
lineage4.1.4 1
lineage4.6.5 1
lineage2.2.1.1 6
La1.3 4
lineage1.2.1.2.1 2
lineage4.2.1.1 2
lineage4.3 3
lineage5.1.1 1
lineage4.6.1.1 1
lineage4.4.2 7
lineage1.1.1.1 2
lineage2.2.2 6
lineage4.9.1 1
lineage4.9;lineage1.1 2
lineage4.9;lineage4.1 1
lineage4.9;lineage4.3.4 1
lineage4.3.4 2
lineage4.4.1.2 1
La1.2 3
lineage4.9;La1.3 1
lineage4.6 2
lineage4.8;lineage4.3.3 4
lineage4.4.1.1;lineage4.1.2.1 1
La1.6 1
lineage2.2.1.2 2
La2 1
La1.4 1
lineage4.2.2.1 2
lineage7;lineage2.2.1.2 1
lineage1.2.1.2 1
La1.7.1 3
lineage3.1 2
lineage4.9;lineage3.1.1 1
lineage1.2.1.1 1
lineage4;lineage2 1
spoligotype Counts
spoligotype Count
None 876
Geographic prevalence
Country level data for this variant is available for 103 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR5818426 Other None
ERR2228810 RR-TB lineage4 None
ERR2228815 RR-TB lineage4.8 None
ERR4816868 Other lineage4.4.1.1 None
ERR2228838 RR-TB lineage4.8 None
ERR4816890 HR-TB lineage4.6.2.2 None
SAMN02380990 MDR-TB lineage4.6.1.2 None
ERR2228890 Other lineage4 None
ERR4817667 HR-TB lineage4.8 None
ERR4818646 Sensitive lineage4.1.2.1 None
SRR4033523 Other lineage2.2 None
ERR4817306 Other lineage3 gb
ERR2228900 RR-TB lineage4.8 None
ERR4815815 Sensitive lineage4 None
ERR4818671 Other lineage4.8 gb
ERR4818663 Other lineage3 None
SAMN02380982 MDR-TB lineage4.3.4.2 None
ERR4817826 RR-TB lineage4.5 None
ERR4818988 Other lineage1 None
ERR4818691 Other lineage4.8 None
ERR4817915 RR-TB lineage4.9 None
ERR4818726 Other lineage4.1.2.1 None
ERR4817917 Other lineage2.2.1 None
ERR4817926 HR-TB lineage4.6.2.2 gb
ERR4817948 Other lineage3 gb
SAMEA3450033 Other lineage4.8 None
ERR4819007 Other lineage2.2.1 None
ERR4819011 Other lineage3.1.2.1 None
ERR4818753 Other lineage3 gb
ERR4818752 Other lineage3 None
ERR2513405 Other lineage2.2.1 None
ERR2510796 HR-TB lineage4.3.4.2 it
ERR2510794 Other lineage4.3.4.2 None
ERR4818013 Other lineage4.3.3 gb
ERR2510804 Other lineage2.2.1 None
ERR4818050 Other lineage4.6.2.2 None
ERR4819017 RR-TB lineage3 None
ERR4818064 Other lineage4.8 None
ERR4818785 RR-TB lineage4.1.2.1 None
ERR4818126 RR-TB lineage1 None
ERR2446566 Other lineage4.1 None
ERR4818173 Other lineage2.2.1 None
ERR3276144 Other lineage3 nl
ERR4818176 Other lineage4.1.2.1 None
ERR4818128 RR-TB lineage4.1.2.1 None
ERR4818831 Other lineage3 None
ERR4818827 Sensitive lineage3 None
ERR2432997 Other lineage4.8 None
ERR2512532 Other lineage5.1.3 gb
ERR4818188 Other lineage4.1.2.1 None
ERR4818192 Other lineage4.1.2.1 gb
ERR4818259 RR-TB lineage4.1.1 None
ERR4818851 RR-TB lineage4.4.1.1 None
ERR4819041 Sensitive lineage4.3.3 gb
SAMEA3501063 RR-TB lineage4.8 None
ERR4818261 Other lineage1.1.2 None
ERR4818874 Other lineage4.1.2.1 gb
ERR4818272 Other lineage4.3.2 None
ERR4818890 Other lineage4.7 None
ERR4818296 Other lineage4.2.2 None
ERR2503533 Other lineage4.1.2.1 fi
ERR4818407 Other lineage4.3.2 None
ERR4818432 HR-TB lineage4.5 gb
ERR4818313 Other lineage2.2.1 None
ERR4818351 Other lineage1.1.3 None
ERR4818918 Other lineage1.1.2 gb
ERR4818507 RR-TB lineage4.1.2.1 None
ERR4818498 Other lineage3.1.2.1 gb
ERR2513273 Other lineage4.1.2.1 None
ERR4818522 Pre-XDR-TB lineage3 None
ERR4818538 Other lineage3 gb
ERR2509886 RR-TB lineage3 None
ERR4818561 HR-TB lineage4 None
SRR5007168 RR-TB lineage4.9 None
ERR4818952 Other lineage3 None
SRR5007161 RR-TB lineage4.1.1.3.1 None
ERR4818574 Other lineage6 None
SRR5007170 RR-TB lineage4.9 None
SRR5007167 RR-TB lineage4.1.1.3.1 None
ERR2512832 Other lineage4.3.4.1 None
ERR4817555 RR-TB lineage3 None
SRR5007172 Sensitive lineage4.1.2.1 None
SRR5074711 Sensitive lineage4.3.3 None
SRR5007204 Other lineage4.1.2.1 None
ERR4817628 Sensitive lineage4.8 gb
ERR4817645 Other lineage4.8 None
ERR4818977 RR-TB lineage4.1.2.1 None
ERR4820689 Sensitive lineage4.1.2.1 None
SRR5341365 Pre-XDR-TB lineage3 None
SRR5007193 RR-TB lineage4.1.1.3.1 None
ERR4817554 Other lineage1.1.1 None
ERR4817584 MDR-TB lineage3 None
ERR2446154 Sensitive lineage4.4.1.1 nl
ERR4818634 Other lineage4.6.1 None
ERR2513657 Other lineage1.2.2.2 gb
ERR4820717 Other lineage1.1.3 None
SAMEA3501067 RR-TB lineage4.8 None
SRR5818458 Other None
ERR4819175 Other lineage4.1.1.3 gb
ERR2513728 Other lineage3 gb
ERR4820720 Other lineage4.1.2.1 None
ERR4819192 Other lineage3 None
ERR4819196 Other lineage4.1.1 gb
ERR4819198 Other lineage2.2.1 None
ERR2513794 Other lineage4.8 gb
ERR4820713 HR-TB lineage4.8 None
ERR4819314 Other lineage1.1.1 None
ERR4820266 RR-TB lineage3 None
ERR4820723 RR-TB lineage4.4.1.1 None
ERR4820290 Other lineage3 None
ERR4819265 HR-TB lineage4.3.4.1 None
ERR4819458 Other lineage4.1.1.3.1 gb
SRR5341412 Pre-XDR-TB lineage3 None
ERR4819383 RR-TB lineage4.9 None
ERR3275615 Sensitive lineage4.4.1.1 nl
ERR4819456 Other lineage4.8 None
ERR4819491 Other lineage4.1.2.1 None
ERR2514173 Other lineage4.5 gb
ERR2514179 Sensitive lineage3.1.1 gb
ERR2514215 Other lineage2.2.1 gb
ERR4819533 Other lineage1.1.2 None
ERR4820746 RR-TB lineage3 None
ERR4820367 Sensitive lineage3.1.1 None
ERR4819528 RR-TB lineage3 None
ERR4819555 Other lineage4.8 None
ERR4819546 HR-TB lineage3 None
ERR4819550 Other lineage3 None
ERR4820410 Pre-XDR-TB lineage3.1.1 None
ERR4819567 Other lineage2.2.1 None
ERR4819615 Other lineage4.3.4.2.1 None
ERR4819636 Other lineage3.1.2 None
ERR2514394 Other lineage4.3.4.2 None
SRR5341456 Other None
ERR4819641 HR-TB lineage4.6.2.2 None
ERR4819706 MDR-TB lineage4.3.4.2 None
ERR2514515 Other lineage4.2.1 None
ERR4820771 Other lineage4.8 None
ERR4819720 Other lineage3.1.2.1 gb
ERR2514550 MDR-TB lineage3 gb
ERR2514565 Other lineage3.1.2.1 gb
ERR4819765 Other lineage4.1 None
ERR4819766 Other lineage4.4.1.1 None
SRR5341267 Pre-XDR-TB lineage3 None
ERR4820484 Other lineage4.8 None
ERR2514576 Other lineage4.8 gb
ERR4819784 Other lineage4.1.2.1 None
ERR2514613 Other lineage4.8 gb
ERR4819770 Other lineage4.8 gb
SRR5341306 Pre-XDR-TB lineage4.4 None
ERR4819876 HR-TB lineage4.3.4.2.1 None
ERR4820798 Other lineage3.1.2.1 gb
ERR4820889 Other lineage3 gb
ERR4819863 RR-TB lineage4.9 None
ERR4819872 HR-TB lineage4.4.1.1 None
ERR4819948 Other lineage4.4.1.1 None
ERR4820817 Other lineage4.1.2.1 None
ERR1023509 Other None
SAMEA3501070 RR-TB lineage4.8 None
ERR2514834 Other lineage4.7 None
ERR2514854 Other lineage4.3.3 None
ERR4820827 Other lineage4.1.2 None
ERR2514926 Other lineage4.6.2.2 gb
ERR4820019 Other lineage4.3.4.2.1 None
ERR4820030 Other lineage4.9 None
ERR4820833 HR-TB None
ERR6359082 Other lineage4.9 None
ERR4820846 RR-TB lineage4.6.2.2 gb
ERR4820130 Other lineage3 None
SRR5341330 HR-TB None
ERR4820107 RR-TB None
SRR5341341 Pre-XDR-TB lineage2.2.1 None
ERR4820193 Other lineage3 None
ERR4820184 MDR-TB lineage3 gb
ERR4821769 Other lineage4.1.2.1 None
ERR4820188 Other lineage3 gb
SRR6045422 Other lineage4.3.1.1 None
ERR4820959 Other lineage4.1.2.1 None
SAMEA3501052 RR-TB lineage4.8 None
ERR4820907 Other lineage4.1.2.1 gb
ERR4820922 Other lineage4.1.2.1 gb
ERR4821054 Other lineage3 None
SRR6046087 Other None
SRR5818445 Other None
SRR5431730 Other La1.8.1 None
SRR6045496 Other lineage6.1.3 None
SAMEA3501046 RR-TB lineage4.8 None
SRR6045464 Other lineage4.1.1.3 None
SRR6045485 Other lineage4.9 None
ERR4821119 Other lineage4.4.1.1 None
SRR5535933 HR-TB None
ERR4821198 Other lineage3 gb
SRR6045553 RR-TB lineage4.9 None
ERR2660539 Other lineage4.9 None
ERR4821154 Other lineage2.2.1 gb
ERR4821167 Other lineage4.8 gb
ERR4821172 RR-TB lineage4.9 None
SRR6046117 RR-TB lineage4.9 None
SRR6045544 Other lineage2.2.1 gb
ERR4821891 Other lineage4.8 None
ERR4821272 RR-TB lineage4.1.2.1 None
ERR4821222 Other lineage4.3.2.1 None
ERR4821214 RR-TB None
ERR4821264 Other lineage1.1.3 None
ERR4821334 RR-TB lineage4.1.3 None
ERR4821962 Other lineage4.1.1.3 gb
ERR4821286 Other lineage4.8 None
ERR4821288 Other lineage4.7 None
ERR4821981 Other lineage4.1.2.1 None
ERR4821310 Other lineage5 None
ERR4822176 Other lineage4.1.1.2 None
ERR4822021 Other lineage4.8 gb
ERR4822105 Other lineage4.1 None
ERR4822150 Other lineage4.8 gb
ERR4821519 Other lineage3 gb
ERR4821372 Other lineage4.1.2.1 None
ERR4822138 Other lineage4.1.2.1 None
SRR6045664 Other lineage4.2.1 None
ERR4821564 Sensitive lineage4.2.2.2 None
ERR4822190 Other lineage1.1.3.1 gb
ERR4821616 Other lineage1.1.3.1 None
ERR4821718 Other lineage4.2.2.2 gb
ERR4821725 Other lineage4.8.2 gb
ERR4821731 Other lineage3 gb
ERR4821746 Other lineage4.4.1.1 gb
SRR6045613 Other lineage3.1.3 None
ERR4821584 Other lineage4.8.2 None
ERR4822261 RR-TB lineage2.2.1 None
ERR4821679 Other lineage4.3.3 None
ERR4821719 Other lineage3 gb
SRR6045591 Other lineage4.1.2.1 None
SRR6045603 RR-TB lineage4.1.1.3 None
SRR6046210 Other lineage4 None
SRR6045614 Other lineage4.8 None
SRR6045618 Other lineage3.1.2 None
SRR5818385 Other lineage4.9 None
SRR6045642 Other lineage3.1.2.2 None
SRR5818393 Other lineage4.9 None
SRR5818395 Sensitive lineage4.9 None
SRR5818394 Other lineage4.9 None
SRR5818391 Other lineage4.9 None
SRR5818399 Sensitive lineage4.9 None
SRR5818397 Other lineage4.9 None
SRR5818398 Other lineage4.9 None
SRR5818388 Other lineage4.9 None
SRR5818396 Other lineage4.9 None
SRR5818389 Other lineage4.9 None
SRR5818402 Other lineage4.9 None
SRR5818408 Other lineage4.9 None
SRR5818405 Sensitive lineage4.9 None
SRR5818411 MDR-TB lineage4.9 None
SRR5818409 Other lineage4.9 None
SRR5818414 Other lineage4.9 None
SRR5818404 Other lineage4.9 None
SRR5818400 Other lineage4.9 None
SRR5818428 Sensitive lineage4.9 None
SRR5818415 Sensitive lineage4.9 None
SRR5818422 Other lineage4.9 None
SRR5818423 MDR-TB lineage4.9 None
SRR5818413 HR-TB lineage4.9 None
SRR5818430 Sensitive lineage4.9 None
SRR5818410 Sensitive lineage4.9 None
SRR5818407 Sensitive lineage4.9 None
SRR5818406 Other lineage4.9 None
SRR5818435 Sensitive lineage4.9 None
SRR5818432 MDR-TB lineage4.9 None
SRR5818425 Other lineage4.9 None
SRR5818436 Sensitive lineage4.9 None
SRR5818429 Sensitive lineage4.9 None
SRR5818427 HR-TB lineage4.9 None
SRR5818440 Other lineage4.9 None
SRR5818424 Sensitive lineage4.9 None
SRR5818446 Other lineage4.9 None
SRR5818431 Sensitive lineage4.9 None
SRR5818437 MDR-TB lineage4.9 None
SRR5818439 Sensitive lineage4.9 None
SRR5818448 Other lineage4.9 None
SRR5818441 Other lineage4.9 None
SRR5818452 Other lineage4.9 None
SRR5818442 Other lineage4.9 None
SRR5818421 Sensitive lineage4.9 None
SRR5818456 Other lineage4.9 None
SRR5818455 Sensitive lineage4.9 None
SRR5818459 Other lineage4.9 None
SRR5818460 Other lineage4.9 None
SRR5818453 Sensitive lineage4.9 None
SRR5818464 Other lineage4.9 None
SRR5818449 MDR-TB lineage4.9 None
SRR5818444 Sensitive lineage4.9 None
SRR5818470 Other lineage4.9 None
SRR5818466 Other lineage4.9 None
SRR5818463 Sensitive lineage4.9 None
SRR5818462 Other lineage4.9 None
SRR5818660 Sensitive lineage4.1.1.3 dj
SRR6045743 Other lineage3 None
SRR5818457 Other lineage4.9 None
SRR5818469 Other lineage4.9 None
SRR6045759 RR-TB lineage2.2.1 gb
SRR5818647 RR-TB lineage4.3.4.2.1 None
SRR5818663 Sensitive lineage4.1.2.1 dj
SRR6044787 Other lineage4.4 None
SRR5818677 Sensitive lineage1.1.2 dj
SRR5818694 RR-TB lineage4.2.2.2;lineage3 None
SRR6045843 Other lineage4.2.2.2 None
SRR6044784 MDR-TB lineage3 None
SRR6045957 Other lineage4.9 None
SRR6045928 Other lineage4.9 None
SRR6045944 Other lineage4.1.2.1 None
SRR6044936 Other lineage4 None
SRR6045909 Other lineage4.8 None
SRR6044873 Other lineage4.1.1.3.1 None
SRR6044904 Other lineage3 None
SRR6044958 Other lineage4.4.1.1 None
SRR6044952 RR-TB lineage4.9 None
SRR6045056 Other lineage2.2.1 gb
SRR6045002 MDR-TB lineage4.9 None
SRR6044983 Other lineage3.1.1 None
SRR6044978 Sensitive lineage4.1.1.3.1 gb
SRR6045124 Other lineage4.9 None
SRR6045053 Other None
SRR6046159 Other lineage4.8.2 None
SRR6045986 Other lineage3 None
SRR6045178 Other lineage3 None
SRR6046177 Other lineage3.1.2 None
SRR6046020 Other lineage3 None
SRR6045158 Other lineage4.9 None
SRR6045255 Sensitive lineage4.1.2 gb
SRR6045217 Other lineage4 None
SRR6046046 Other None
SRR6045312 Other lineage1.1.3.3 None
SRR6045267 RR-TB lineage4 None
SRR6045261 Other lineage1.1.2 gb
SRR6045264 Sensitive lineage2.2.1 None
SRR6045295 Other lineage4.7 None
SRR6045384 Other lineage4.1.2 None
SRR6045325 Other lineage4.8.1 gb
SRR6045359 Sensitive lineage4.9 None
SRR6045379 Other None
SRR6045424 Other lineage1.1.2 None
SRR6046275 Other lineage3.1.1 None
SRR6046246 Other lineage3 None
SRR6046250 Other lineage4.9 None
SRR6046253 HR-TB lineage4.9 None
ERR4829360 Sensitive lineage4.7 None
SRR6046299 HR-TB None
SRR6046359 Other lineage4.7 None
SRR6046343 Other lineage2.2.1 None
SRR6046376 Other lineage3 None
ERR4829039 RR-TB lineage4.3.1 None
ERR2851359 Other lineage4.9 None
ERR4829359 Other lineage4.7 None
ERR4828962 Other lineage4.1.4 it
SRR6046447 Sensitive lineage4.8 gb
SRR6046440 Other lineage3.1.2.2 None
SRR6046442 Other lineage3 None
SRR6046497 Other lineage4.9 None
SRR6046463 Other lineage4.4.1.1 None
SRR6046482 HR-TB None
SRR6046484 Other lineage1.2.2.2 None
SRR6046492 Other None
SRR6046541 Other lineage4.9 None
SRR6046607 Other lineage3 None
SRR6046534 Other lineage1.1.2 None
SRR6046701 Other lineage3.1.2.2 None
SRR6046641 Other lineage4.8 None
SRR6046655 Other lineage4.1.2.1 None
SRR6046668 Sensitive lineage1.1.2 gb
SRR6046616 Other lineage4.3.1.1 None
SRR6046646 Other lineage4.7 gb
SRR6046802 Other lineage4 None
SRR6046733 Pre-XDR-TB lineage2.2.1 None
SRR6046729 Other None
SRR6046737 Other lineage4.9 None
SRR6046839 Other lineage4.9 None
SRR6046818 Other lineage4.2.1 gb
SRR6046815 Other lineage3 None
SRR6046852 MDR-TB lineage3 None
SRR6046848 Other lineage4.6.5 None
SRR6046860 Other lineage4.4.1.1 None
SRR6046878 HR-TB lineage4 None
ERR2886463 Sensitive lineage2.2.1 None
SRR6152838 Other lineage2.2.1.1 ca
ERR3077969 Other La1.3 None
SRR6152681 Sensitive lineage1.2.1.2.1 ca
SRR6397640 Other lineage4.2.1.1 None
ERR4831117 HR-TB None
ERR502470 RR-TB lineage4.9 None
ERR502473 Pre-XDR-TB lineage4.9 None
ERR502474 Pre-XDR-TB lineage4.9 None
ERR502478 RR-TB lineage4.9 None
SRR6982090 RR-TB lineage4.4.1.1 None
ERR4872322 Pre-XDR-TB lineage2.2.1 None
ERR502479 RR-TB lineage4.9 None
ERR502481 Pre-XDR-TB lineage4.9 None
SRR6982141 RR-TB lineage4.3.3 None
SRR6785281 Other lineage4.2.1.1 None
ERR3275941 RR-TB lineage4.3 nl
SRR6982239 HR-TB lineage4.1.1.3 None
SRR6982246 Sensitive lineage4 None
SRR6832644 Other lineage4.3.3 None
ERR2984792 Pre-XDR-TB lineage4.3.4.1 None
ERR2984800 Pre-XDR-TB lineage4.3.4.1 None
ERR502517 MDR-TB lineage5.1.1 None
ERR5087846 Other La1.8.1 None
ERR3275190 Other lineage3 nl
ERR5087596 Other La1.8.1 None
ERR5311077 RR-TB La1.8.1 None
SRR7131121 Other lineage4.3.3 None
SRR7131068 Other lineage4.8 None
SRR7131123 Other lineage4.8 None
SRR9971246 MDR-TB lineage4.1.1.3 None
SRR7131004 Other lineage4.6.2.2 None
SRR7131030 Other lineage4.1.2.1 None
SRR7131109 Pre-XDR-TB lineage4.8 None
SRR7131161 Other lineage4.8 None
SRR7131145 Other lineage4.1.2.1 None
SRR7131149 Pre-XDR-TB lineage4.8 None
SRR7131147 Other lineage4.1.2.1 None
SRR7131152 MDR-TB lineage2.2.1 None
SRR7131125 Other lineage2.2.1 None
SRR7131221 Other lineage4.6.2.2 None
SRR7131195 Other lineage2.2.1 None
SRR7131216 Other lineage4.1.2.1 None
SRR7131237 Other lineage2.2.1 None
SRR7131230 HR-TB lineage4.3.4.2 None
SRR7131236 Other lineage4.3.4.2 None
SRR7645899 RR-TB lineage2.2.1 None
SRR9971333 MDR-TB lineage4.1.1.3 None
SRR7131287 Other lineage2.2.1.1 None
SRR7535047 RR-TB lineage4.6.1.1 None
SRR9970981 RR-TB lineage4.3.2.1 None
SRR7645906 Other lineage2.2.1 None
SRR7645901 MDR-TB lineage2.2.1 None
SRR7645927 Other lineage4.8 None
SRR7645928 RR-TB lineage4.7 None
SRR7645971 Other lineage2.2.1 None
SRR9971046 MDR-TB lineage4.8 None
SRR7645972 MDR-TB lineage4.2.1 None
SRR7646018 MDR-TB lineage4.2.1 None
SRR9971065 RR-TB lineage2.2.1 None
SRR9971114 Other lineage2.2.1 None
SRR9971088 RR-TB lineage2.2.1 None
SRR8651616 MDR-TB lineage2.2.1 None
SRR8651633 Pre-XDR-TB lineage4.4.2 None
SRR7755645 Pre-XDR-TB lineage2.2.1 None
SRR9971112 Other lineage2.2.1 None
SRR9971122 MDR-TB lineage4.8 None
SRR7755649 MDR-TB lineage4.2.1 None
SRR7755654 Pre-XDR-TB lineage4.2.1 None
SRR7755657 Other lineage4.8 None
SRR7755655 Other lineage4.1.2.1 None
SRR7755688 Pre-XDR-TB lineage4.2.1 None
SRR9971113 Other lineage2.2.1 None
ERR323044 HR-TB lineage4.3.4.2.1 None
ERR323048 Pre-XDR-TB lineage4.9 None
SRR7765062 Pre-XDR-TB lineage4.1.2.1 None
DRR184629 Other lineage2.2.1 None
DRR034348 Other lineage2.2.1 None
DRR185000 Other lineage1.1.1.1 None
DRR184982 RR-TB lineage2.2.1 None
ERR036207 Other lineage4.9 None
DRR188816 Sensitive lineage4.2.2 None
DRR185024 Other lineage2.2.2 None
DRR188519 Other lineage4.4.2 None
ERR017781 Other lineage3 None
ERR037504 Other lineage4.9.1 None
ERR10796562 Other lineage4.3.4.1 None
ERR067712 HR-TB lineage4 None
ERR1023502 MDR-TB lineage2.2.1 None
ERR1034647 MDR-TB lineage4.1.1.3 None
ERR10796555 Other lineage4.1.2.1 None
ERR10762495 MDR-TB lineage2.2.1 None
ERR10796558 Sensitive lineage4 None
ERR10796559 Other lineage4.9 None
ERR10796553 Other lineage4.9;lineage1.1 None
ERR10796560 MDR-TB lineage4.9;lineage4.1 None
ERR10796561 Other lineage4.3.2 None
ERR10796563 Other lineage4.3.3 None
ERR10796564 Other lineage4.3.3 None
ERR10796565 RR-TB lineage4.9 None
ERR10796566 Other lineage4.9;lineage4.3.4 None
ERR10796578 Other lineage2.2.1 None
ERR10796572 Other lineage4.3.4.1 None
ERR10796571 Other lineage4.9 None
ERR10796577 RR-TB lineage4.9 None
ERR10796575 RR-TB lineage4.9 None
ERR10796590 Other lineage4.9 None
ERR10796589 Other lineage4.9 None
ERR10796581 HR-TB lineage4.1.2 None
ERR10796582 HR-TB lineage4.3 None
ERR10796588 Other lineage4 None
ERR10796592 Other lineage4 None
ERR10796591 MDR-TB lineage4.9 None
ERR10796594 Other lineage4.9 None
ERR10796593 RR-TB lineage4 None
ERR10796596 Other lineage4.9 None
ERR10796597 Other lineage4 None
ERR10796595 Other lineage4.9 None
ERR10796598 RR-TB lineage4.9 None
ERR10796627 Other lineage4 None
ERR10796615 Other lineage4 None
ERR10796618 Other lineage4.3.4.1 None
ERR10796620 Other lineage4.1.1 None
ERR10796626 Other lineage4.1.2 None
ERR10796599 Other lineage4 None
ERR10796634 Other lineage4 None
ERR10796628 Other lineage4.3.3 None
ERR10796631 Other lineage4.3.4 None
ERR10796632 Other lineage4.3.3 None
ERR10796629 Other lineage4 None
ERR10796633 RR-TB lineage4.3.4 None
ERR10796640 Other lineage4.1.2.1 None
ERR10796636 Other lineage4.1.2.1 None
ERR10796635 Other lineage4 None
ERR126597 MDR-TB lineage4.4.1.2 None
ERR3283033 Sensitive lineage4.9 None
ERR3283006 RR-TB lineage4.9 None
ERR3468613 RR-TB La1.8.1 None
ERR3439489 RR-TB La1.8.1 None
ERR3468488 RR-TB La1.8.1 None
ERR3283055 HR-TB None
ERR3445504 HR-TB None
ERR4457829 MDR-TB lineage4.1.2.1 None
ERR3561977 MDR-TB lineage4.1.1 None
ERR3797046 HR-TB None
ERR4024582 MDR-TB lineage4.1.2.1 None
ERR4187652 Other lineage4.9 None
ERR4423674 MDR-TB lineage4.6.1 None
ERR3797062 RR-TB lineage4.9 None
ERR3806588 Other lineage6 None
ERR4178161 Other lineage4.4.1.1 None
ERR4586795 Other La1.8.1 None
ERR4596902 HR-TB lineage3 None
ERR4596904 MDR-TB lineage3.1.1 None
ERR4769419 Other lineage4.9 None
ERR4596944 MDR-TB lineage3.1.1 None
ERR4627319 Other La1.8.1 None
ERR4769406 Other lineage4.9 None
ERR4769417 Pre-XDR-TB lineage4.9 None
ERR4769450 HR-TB None
ERR4769427 Other La1.2 None
ERR4769436 Other La1.3 None
ERR4769452 HR-TB None
ERR4769457 Other lineage4.9 None
ERR4769418 Other La1.2 None
ERR4769433 Pre-XDR-TB lineage4.9 None
ERR4769495 Other La1.3 None
ERR4769493 Pre-XDR-TB lineage4.9;La1.3 None
ERR4769518 Sensitive lineage4.9 None
ERR4769497 HR-TB La1.2 None
ERR4769516 Other La1.3 None
ERR4797156 Pre-XDR-TB lineage2.2.1 in
ERR4769554 RR-TB lineage4.9 None
ERR4796351 MDR-TB lineage4.9 None
ERR4798823 HR-TB lineage4 None
ERR4798769 Other lineage1.1.3.3 None
ERR4799025 Pre-XDR-TB None
ERR5917972 MDR-TB lineage4.4.1.1 za
ERR4808964 RR-TB lineage2.2.1 None
ERR4811493 HR-TB None
ERR4799513 HR-TB lineage2.2 None
ERR4809333 Pre-XDR-TB lineage2.2.2 None
ERR6197034 Other lineage4.9 None
ERR6197024 RR-TB lineage4.9 None
ERR5979454 Pre-XDR-TB lineage3 None
ERR6197022 Other lineage4.9 None
ERR6197026 RR-TB lineage4.9 None
ERR6197038 HR-TB lineage4.9 None
ERR6197043 MDR-TB lineage4.3.4.2 None
ERR6197044 RR-TB lineage4.9 None
ERR6865446 Other lineage4.4.1.1 None
ERR8774326 MDR-TB lineage4.6.1 None
ERR752012 HR-TB lineage1.1.1.1 None
ERR6866171 Sensitive lineage4.3.3 None
ERR752229 Other lineage4.5 None
ERR9117704 Other lineage4.6 None
ERR9117699 Other lineage4.1.2.1 None
ERR9117747 HR-TB lineage4.8 None
ERR9117725 Other lineage4.1.1 None
ERR9117732 Other lineage1.2.2.2 None
ERR9117740 Other lineage3.1.1 None
ERR9117760 HR-TB lineage4.3 None
ERR9117788 Other lineage3 None
ERR9117812 Other lineage4.3.1.1 None
ERR9117805 Other lineage4.3.2 None
ERR9786164 RR-TB lineage4.1.1.3 None
ERR9117826 Other lineage3.1.3 None
ERR9992879 XDR-TB lineage4.3.3 None
ERR9786639 Sensitive lineage4.8 None
ERR987707 MDR-TB lineage4.7 None
ERR9896153 RR-TB lineage4.4.1.1 None
SRR10315464 MDR-TB lineage4.4.1.1 None
SRR10315567 Other lineage2.2.1 None
SRR10315556 Sensitive lineage2.2.1 None
SRR10315558 Sensitive lineage2.2.1 None
SRR1049559 MDR-TB lineage4.3.4.2.1 None
SRR1049560 MDR-TB lineage4.3.4.2.1 None
SRR1049675 HR-TB lineage2.2.1 None
SRR1049581 MDR-TB lineage4.6.1.2 None
SRR1049582 MDR-TB lineage4.6.1.2 None
SRR1049676 MDR-TB lineage4.8;lineage4.3.3 None
SRR1049674 HR-TB lineage2.2.1 None
SRR1049677 MDR-TB lineage4.8;lineage4.3.3 None
SRR1062871 MDR-TB lineage4.3.4.2.1 None
SRR1049726 MDR-TB lineage4.4.1.1;lineage4.1.2.1 None
SRR1049725 RR-TB lineage4.1.2.1 None
SRR1062918 Pre-XDR-TB lineage3 None
SRR1062880 MDR-TB lineage4.6.1.2 None
SRR1062919 HR-TB lineage2.2.1 None
SRR10993951 RR-TB La1.6 None
SRR1062928 RR-TB lineage4 None
SRR1062920 MDR-TB lineage4.8;lineage4.3.3 None
SRR1140724 HR-TB lineage2.2.1 None
SRR11342634 MDR-TB lineage4.8 None
SRR1140716 Pre-XDR-TB lineage3 None
SRR11342688 Other lineage4.2.2.2 None
SRR11349147 RR-TB lineage4.3.2.1 None
SRR11349203 MDR-TB lineage4.4.1.1 None
SRR11349211 Pre-XDR-TB lineage4.3.3 None
SRR1140574 MDR-TB lineage4.8;lineage4.3.3 None
SRR1140712 MDR-TB lineage4.6.1.2 None
SRR11462861 Other La1.8.1 None
SRR1140736 RR-TB None
SRR1140753 MDR-TB lineage4.3.4.2.1 None
SRR1172796 Sensitive lineage2.2.1.2 None
SRR1172987 HR-TB lineage4.9 None
SRR1173310 MDR-TB None
SRR1173170 Other lineage4.9 None
SRR1173185 HR-TB lineage4.9 None
SRR1173281 RR-TB lineage3 None
SRR1173450 RR-TB lineage4.9 None
SRR1173740 Other None
SRR1173719 HR-TB lineage3 None
SRR1175473 Other lineage4.9 None
SRR1173770 Other lineage4.9 None
SRR1175127 Sensitive lineage2.2.1.2 None
SRR1184329 MDR-TB lineage4.9 None
SRR1175491 MDR-TB lineage4 None
SRR1175474 HR-TB lineage4.9 None
SRR1175472 MDR-TB lineage4 None
SRR1180440 Other lineage4.9 None
SRR1180446 Other lineage4.9 None
SRR1184308 Sensitive lineage4.9 None
SRR1196478 MDR-TB lineage4.9 None
SRR11972369 Pre-XDR-TB lineage2.2.1 None
SRR1196545 HR-TB lineage4.9 None
SRR11972425 Pre-XDR-TB lineage2.2.1 None
SRR11972417 MDR-TB lineage2.2.1 None
SRR12142339 HR-TB lineage2.2.1 None
SRR12006547 Sensitive lineage1.2.1.2.1 None
SRR12199457 Sensitive lineage4.9;lineage1.1 None
SRR14334194 Pre-XDR-TB lineage2.2.1 None
SRR12634609 MDR-TB lineage3.1.1 None
SRR13423546 Other lineage4.4.2 None
SRR13888750 Other La2 None
SRR14782539 MDR-TB lineage4.2.1 None
SRR14782405 HR-TB None
SRR14801652 MDR-TB lineage4.3.3 None
SRR14801325 Pre-XDR-TB lineage4.2.1 None
SRR15316554 Sensitive lineage2.2.1 None
SRR14801720 RR-TB lineage4.8 None
SRR16278274 Other La1.4 None
SRR15316557 Sensitive lineage2.2.1 None
SRR15316561 Sensitive lineage2.2.1 None
SRR15316595 RR-TB lineage4.4.2 None
SRR16156775 Other lineage4.9 None
SRR16156832 RR-TB None
SRR16149133 MDR-TB lineage4.2.2.1 None
SRR16156188 HR-TB lineage4.9 None
SRR16156697 MDR-TB lineage2.2.1 None
SRR16157123 Other lineage4.9 None
SRR16627752 RR-TB lineage4.4 None
SRR16370694 Sensitive lineage4.1.1 None
SRR17567917 RR-TB lineage4.4.1.1 None
SRR1735596 RR-TB lineage4.9 None
SRR18002891 MDR-TB lineage2.2.1 None
SRR1791725 Other La1.8.1 None
SRR18002875 MDR-TB lineage2.2.2 None
SRR1792022 Other La1.8.1 None
SRR18002874 MDR-TB lineage2.2.1 None
SRR18002881 Pre-XDR-TB lineage2.2.1 None
SRR18002909 MDR-TB lineage2.2.1 None
SRR18002887 MDR-TB lineage2.2.1.1 None
SRR18002903 Pre-XDR-TB lineage2.2.1 None
SRR18002908 Other lineage2.2.1 None
SRR18002926 Other lineage2.2.1 None
SRR18002906 Pre-XDR-TB lineage2.2.1 None
SRR18002935 Pre-XDR-TB lineage2.2.1 None
SRR18002930 MDR-TB lineage2.2.1 None
SRR18002933 Other lineage2.2.1 None
SRR18002947 MDR-TB lineage2.2.1 None
SRR18002941 RR-TB lineage2.2.1 None
SRR18002945 RR-TB lineage2.2.1 None
SRR18002937 Other lineage2.2.1 None
SRR18002967 Pre-XDR-TB lineage2.2.1 None
SRR18002948 Other lineage2.2 None
SRR18002954 Other lineage2.2.1 None
SRR18002963 Other lineage2.2.1 None
SRR18002976 Other lineage2.2.1 None
SRR18002974 Pre-XDR-TB lineage2.2.1 None
SRR18002985 HR-TB lineage2.2.1 None
SRR18002981 Other lineage2.2.1 None
SRR18002980 Other lineage2.2.1 None
SRR18002984 MDR-TB lineage2.2.2 None
SRR18002994 MDR-TB lineage4.2.2 None
SRR18003007 MDR-TB lineage4.5 None
SRR18002998 Pre-XDR-TB lineage2.2.2 None
SRR18003002 MDR-TB lineage2.2.1 None
SRR18003004 Pre-XDR-TB lineage2.2.2 None
SRR18003013 Pre-XDR-TB lineage4.4.2 None
SRR18003009 MDR-TB lineage2.2.1 None
SRR18003012 Pre-XDR-TB lineage2.2.1 None
SRR18003024 RR-TB lineage2.2.1 None
SRR18003023 Other lineage2.2.1 None
SRR18003015 MDR-TB lineage2.2.1 None
SRR18003030 Pre-XDR-TB lineage2.2.1 None
SRR18003027 Other lineage2.2.1 None
SRR18003031 HR-TB lineage2.2.1 None
SRR18003032 Other lineage2.2.1 None
SRR18003038 Other lineage2.2.1 None
SRR18213726 Other lineage3 None
SRR18003049 Other lineage2.2.1 None
SRR18003042 Other lineage2.2.1 None
SRR18003045 Other lineage2.2.1 None
SRR18003047 MDR-TB lineage2.2.1 None
SRR18003046 MDR-TB lineage2.2.1 None
SRR18213684 Pre-XDR-TB lineage4.1.1.3.1 None
SRR18213721 Other lineage4.8 None
SRR18913742 Sensitive lineage3.1.3 None
SRR18213736 MDR-TB lineage3 None
SRR18911231 Sensitive lineage4.1.1.3 None
SRR18549032 HR-TB lineage7;lineage2.2.1.2 None
SRR18909918 Other lineage2.2.1.1 None
SRR19233762 Sensitive lineage4.1.1 None
SRR19303773 Other lineage4.6.2.2 None
SRR19303796 Other lineage4.3.3 None
SRR19303818 Other lineage4.3.4.2 None
SRR19303817 Other lineage2.2.1 None
SRR19303815 Other lineage4.8 None
SRR19303820 RR-TB lineage4.8 None
SRR19303899 Other lineage3 None
SRR19303819 Other lineage4.6.2.2 None
SRR19304115 Other lineage4.1.2.1 None
SRR19303907 Other lineage4.8 None
SRR19304094 Other lineage6 None
SRR19304104 Other lineage4.8 None
SRR20969475 Other lineage1.2.1.2 None
SRR19325518 MDR-TB lineage2.2.1 None
SRR20969708 HR-TB lineage2.2 None
SRR20969542 Other lineage4.4.2 None
SRR20969731 Other lineage2.2.1 None
SRR20970016 Other lineage2.2 None
SRR21469200 Other La1.7.1 None
SRR21240055 Other lineage4.1.2.1 None
SRR21469201 Other La1.7.1 None
SRR21469202 Other La1.7.1 None
SRR22424743 Pre-XDR-TB lineage1.1.2 None
SRR21658550 Other lineage1.1.1 None
SRR21727760 Other lineage2.2.1 None
SRR22175249 Pre-XDR-TB lineage2.2.1 None
SRR22424765 MDR-TB lineage4 None
SRR22424851 MDR-TB lineage4.3.3 None
SRR22424787 Sensitive lineage4.9 None
SRR22424778 RR-TB lineage2.2.1.1 None
ERR11243600 Sensitive lineage4.3.3 None
SRR22424884 Pre-XDR-TB lineage2.2.1 None
SAMEA3501065 RR-TB lineage4.8 None
SRR6207283 Sensitive lineage4.3.3 None
SRR3675474 Other lineage4.1.1 None
ERR4815204 Other lineage2.2.1.1 gb
ERR4815278 Other lineage4.8 None
ERR4815613 Other lineage3 None
ERR4815301 Other lineage4.4.2 None
ERR4815777 Other lineage4.9 None
ERR4815310 Other None
ERR4814438 HR-TB lineage4.1.2.1 gb
SRR3619841 Pre-XDR-TB lineage2.2.1 None
SRR3601585 Pre-XDR-TB lineage2.2 None
ERR4815427 HR-TB lineage3.1 gb
ERR4815425 Other lineage4.5 gb
ERR4814639 HR-TB lineage4 None
ERR4815783 Other lineage4.1.2.1 gb
ERR4814617 Other lineage1.1.3.1 None
SRR3619764 Pre-XDR-TB lineage2.2 None
SRR3618864 Pre-XDR-TB lineage2.2.1 None
ERR4814671 Other lineage3 gb
SRR3675230 RR-TB lineage3 None
ERR4814714 Other lineage3 None
ERR171142 Other lineage4.9;lineage3.1.1 None
ERR4814699 HR-TB lineage4.1.2.1 gb
ERR4815502 Other lineage4.1 None
ERR4814748 Other lineage4.8 None
ERR1750926 Other lineage4.3.2.1 za
SRR3675265 Other lineage4 None
SRR3675245 Other lineage4.1.2.1 None
SRR2024953 MDR-TB lineage2.2.1 cn
SRR3675270 HR-TB None
ERR4814874 MDR-TB lineage1.1.2 None
ERR176580 Sensitive lineage4.3.4.2.1 None
ERR4813263 MDR-TB lineage4.8 None
ERR4815738 Other lineage3 None
ERR4814905 Other lineage4.8 gb
ERR4815550 Other lineage4 None
ERR4814923 Other lineage4.3.2 None
ERR4814976 Other lineage4.9 None
ERR4814994 HR-TB lineage2.2.1 gb
ERR4815040 Other lineage4.2.2.2 None
SAMEA3501073 RR-TB lineage4.8 None
ERR4815022 Other lineage3.1.2.1 None
ERR4815036 Sensitive lineage4.8 None
ERR4815572 Other lineage4.1.2.1 None
ERR4815065 Other lineage4.1.2.1 gb
ERR4816928 HR-TB lineage1.2.2.2 None
ERR4815101 Other lineage3 gb
SRR5818419 Sensitive None
ERR4815584 Other lineage4.3.4.2.1 gb
ERR4815849 Other lineage3.1.1 None
SAMEA3501015 Other lineage4.8 None
ERR4817309 Other lineage4.5 gb
SRR3675509 Other lineage4.9 None
ERR4815901 Other lineage2.2 None
ERR4815910 Other lineage4.1.2.1 None
ERR4815919 Other lineage4.8 None
ERR4816967 RR-TB lineage5 None
SRR3675510 Other None
SRR3675513 Other lineage4.8 None
ERR4815956 Other lineage1.1.2 None
ERR4815994 Other lineage3 gb
SRR3675527 RR-TB lineage4.9 None
ERR4816988 Other lineage3 gb
ERR4816001 Other lineage3 None
ERR4816015 HR-TB lineage4.4.1.1 None
ERR2027220 Other lineage3.1.3 None
ERR4816031 Other lineage4.3.3 gb
ERR2027250 Other lineage3.1.2 None
ERR2027290 RR-TB lineage3.1 None
ERR2027209 MDR-TB lineage1.2.1.1 None
ERR2027255 HR-TB lineage4.4.1.1 None
ERR4816093 Other lineage1.1.3 None
ERR2027257 Other lineage4.1.2.1 None
ERR4816183 Other None
SRR3675552 RR-TB lineage4.9 None
ERR4816184 Other lineage4.1.2.1 None
ERR4816231 Other lineage4 None
ERR4817047 Other lineage4.2.2.1 gb
ERR4816422 Other lineage4.1.1 gb
ERR4816310 HR-TB lineage4.6.1.2 None
ERR4816322 Other lineage4.9 None
ERR212114 Other lineage4.3.4.2.1 None
ERR4816249 Other lineage1.1.2 gb
SRR3675565 Other lineage3 None
ERR4817069 RR-TB None
ERR4816417 Other lineage4.9 None
ERR2446509 Other lineage3 nl
ERR4816437 Other lineage3 gb
ERR4816569 Other lineage4.3.3 gb
ERR4817109 Other lineage3 None
ERR4816510 Other lineage4.1.2.1 None
ERR4816531 Other lineage4.1.2 None
ERR4816476 Other lineage3.1.2.1 None
ERR4816571 Other lineage1.1.2 None
ERR4816692 Other lineage4.1.2.1 None
ERR4816610 RR-TB lineage4.3.3 None
ERR4817398 Other lineage3.1.1 None
ERR4816702 RR-TB lineage4.6.2.2 None
ERR4816745 Pre-XDR-TB lineage2.2.1 None
ERR4816699 Other lineage4.6 None
ERR2229436 Other lineage4.8 None
ERR4816762 Other lineage4;lineage2 None
ERR4817434 Other lineage3 None
SRR5818386 Other None
ERR4816833 Other lineage4.1.1.3 None
ERR4817274 Other lineage4.9 gb
ERR4816800 Other lineage4.8 gb
ERR4816831 Other lineage4.1.2.1 None
ERR4816856 Other lineage4.1.2.1 None
ERR4816852 Other lineage4.9 None