Rv0668 - p.Ser377Ala
Drug resistance types
39 Sensitive
114 RR-TB
17 HR-TB
49 MDR-TB
21 Pre-XDR-TB
1 XDR-TB
56 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.2.1 | 2 |
| lineage2.2.1 | 31 |
| lineage4.9 | 144 |
| lineage4.3.4.1 | 1 |
| 7 | |
| lineage4.4 | 1 |
| lineage4.4.1.2 | 2 |
| lineage4.4.1.1 | 4 |
| La1.8.1 | 10 |
| lineage4.8 | 8 |
| lineage4.6.2.2 | 1 |
| lineage4.4.2 | 1 |
| La1.7.1 | 2 |
| lineage4.3.4.2.1 | 10 |
| lineage2.2 | 2 |
| lineage4.1.2 | 1 |
| lineage3 | 15 |
| lineage3.1.2.1 | 1 |
| lineage4.3.4.2 | 1 |
| lineage4.6.1.2 | 5 |
| lineage4.3.3 | 3 |
| lineage4.1.1.3.1 | 1 |
| lineage4.8.2 | 1 |
| lineage4.1.2.1 | 4 |
| lineage4 | 7 |
| lineage4.1.1.3 | 5 |
| lineage4.2.2.2 | 1 |
| lineage4.1 | 1 |
| lineage5.1.1 | 1 |
| lineage4.3 | 1 |
| lineage4.6.1.1 | 1 |
| lineage4.3.2.1 | 2 |
| lineage2.2.2 | 3 |
| La1.7.X-unk4 | 1 |
| lineage3.1.1 | 3 |
| La1.3 | 3 |
| lineage4.5;lineage2.2.1 | 1 |
| lineage4.6.5 | 2 |
| lineage4.7 | 1 |
| lineage4.8;lineage4.3.3 | 4 |
| lineage4.4.1.1;lineage4.1.2.1 | 1 |
| La1.6 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 297 |
Geographic prevalence
Country level data for this variant is available for 6 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR14782539 | MDR-TB | lineage4.2.1 | None | SRR15315797 | RR-TB | lineage2.2.1 | None | SRR16156188 | HR-TB | lineage4.9 | None | SRR15508556 | Other | lineage4.3.4.1 | None | SRR16156804 | RR-TB | lineage4.9 | None | SRR16156697 | MDR-TB | lineage2.2.1 | None | SRR16156832 | RR-TB | None | SRR16157123 | Other | lineage4.9 | None | SRR1735596 | RR-TB | lineage4.9 | None | SRR16627752 | RR-TB | lineage4.4 | None | SRR18511647 | Sensitive | lineage2.2.1 | None | SRR17567887 | Sensitive | lineage4.4.1.2 | None | SRR17567917 | RR-TB | lineage4.4.1.1 | None | SRR17567930 | Other | lineage4.4.1.1 | None | SRR1792025 | Other | La1.8.1 | None | SRR1792011 | Other | La1.8.1 | None | SRR19303788 | Sensitive | lineage4.8 | None | SRR19303773 | Other | lineage4.6.2.2 | None | SRR20969542 | Other | lineage4.4.2 | None | SRR19303820 | RR-TB | lineage4.8 | None | SRR21469202 | Other | La1.7.1 | None | SRR2101471 | RR-TB | lineage4.4.1.1 | None | SRR21469201 | Other | La1.7.1 | None | ERR161014 | Sensitive | lineage4.3.4.2.1 | None | ERR176780 | Sensitive | lineage4.9 | None | SRR22175249 | Pre-XDR-TB | lineage2.2.1 | None | SRR3619841 | Pre-XDR-TB | lineage2.2.1 | None | SRR3601585 | Pre-XDR-TB | lineage2.2 | None | SRR3618864 | Pre-XDR-TB | lineage2.2.1 | None | SRR3619764 | Pre-XDR-TB | lineage2.2 | None | ERR4812763 | Other | lineage2.2.1 | None | ERR1750944 | Other | lineage4.1.2 | za | ERR2446544 | Sensitive | lineage3 | nl | ERR1750907 | RR-TB | None | ERR176619 | Sensitive | lineage4.9 | None | ERR176580 | Sensitive | lineage4.3.4.2.1 | None | SAMEA3501073 | RR-TB | lineage4.8 | None | ERR4815556 | RR-TB | lineage3 | None | ERR190388 | Sensitive | lineage4.9 | None | ERR4817069 | RR-TB | None | ERR4815079 | RR-TB | lineage3 | None | ERR4817204 | RR-TB | lineage4.9 | None | ERR3275548 | Sensitive | lineage3 | nl | ERR2229198 | MDR-TB | lineage4.8 | None | ERR2229791 | RR-TB | lineage4.9 | None | ERR4816717 | RR-TB | lineage3.1.2.1 | None | ERR4816729 | Sensitive | lineage4.9 | None | SAMN02380982 | MDR-TB | lineage4.3.4.2 | None | ERR2229442 | HR-TB | lineage4.8 | None | SAMN02380990 | MDR-TB | lineage4.6.1.2 | None | ERR2509886 | RR-TB | lineage3 | None | ERR4818851 | RR-TB | lineage4.4.1.1 | None | ERR4818583 | Other | lineage4.3.3 | None | SRR5007161 | RR-TB | lineage4.1.1.3.1 | None | SRR5007169 | RR-TB | lineage4.8.2 | None | SRR5007168 | RR-TB | lineage4.9 | None | ERR4818646 | Sensitive | lineage4.1.2.1 | None | ERR4819383 | RR-TB | lineage4.9 | None | ERR4819131 | Other | lineage4 | None | ERR2515352 | Sensitive | lineage2.2.1 | None | ERR4820586 | Other | lineage3 | gb | ERR2514137 | Pre-XDR-TB | lineage2.2.1 | None | ERR4820394 | Other | lineage4.3.4.2.1 | None | ERR4819863 | RR-TB | lineage4.9 | None | ERR4819910 | Other | lineage4.9 | None | ERR1023509 | Other | None | ERR4820503 | Other | lineage2.2.1 | None | ERR4821811 | RR-TB | lineage4.9 | None | ERR4820030 | Other | lineage4.9 | None | ERR2517457 | Sensitive | lineage3 | None | ERR4821143 | RR-TB | lineage4.9 | None | ERR4821172 | RR-TB | lineage4.9 | None | ERR2660498 | Sensitive | lineage4.3.4.2.1 | None | ERR2660499 | Sensitive | lineage4.1.1.3 | None | ERR4821276 | Other | lineage3 | None | SRR5709926 | MDR-TB | lineage2.2.1 | None | ERR4821272 | RR-TB | lineage4.1.2.1 | None | SRR6046839 | Other | lineage4.9 | None | SRR6046376 | Other | lineage3 | None | SRR6046834 | Sensitive | lineage4.9 | None | SRR5818586 | RR-TB | lineage4.2.2.2 | None | SRR6044952 | RR-TB | lineage4.9 | None | SRR6045002 | MDR-TB | lineage4.9 | None | SRR6397389 | Sensitive | lineage4.1.2.1 | None | ERR502478 | RR-TB | lineage4.9 | None | ERR502470 | RR-TB | lineage4.9 | None | ERR502473 | Pre-XDR-TB | lineage4.9 | None | ERR502474 | Pre-XDR-TB | lineage4.9 | None | ERR502479 | RR-TB | lineage4.9 | None | ERR4831529 | Pre-XDR-TB | lineage2.2.1 | None | ERR502481 | Pre-XDR-TB | lineage4.9 | None | SRR6982246 | Sensitive | lineage4 | None | ERR4872322 | Pre-XDR-TB | lineage2.2.1 | None | SRR6982239 | HR-TB | lineage4.1.1.3 | None | ERR4831722 | HR-TB | lineage2.2.1 | None | SRR6982141 | RR-TB | lineage4.3.3 | None | SRR6789624 | MDR-TB | lineage4.1 | None | SRR6789628 | HR-TB | lineage4.9 | None | ERR5087846 | Other | La1.8.1 | None | ERR502517 | MDR-TB | lineage5.1.1 | None | ERR5311087 | Other | La1.8.1 | None | ERR3275941 | RR-TB | lineage4.3 | nl | ERR5311077 | RR-TB | La1.8.1 | None | ERR5311084 | Other | La1.8.1 | None | SRR9971113 | Other | lineage2.2.1 | None | SRR7535047 | RR-TB | lineage4.6.1.1 | None | SRR9971114 | Other | lineage2.2.1 | None | SRR9971112 | Other | lineage2.2.1 | None | SRR7585435 | Other | lineage4.9 | None | SRR9970981 | RR-TB | lineage4.3.2.1 | None | SRR9971046 | MDR-TB | lineage4.8 | None | SRR9971065 | RR-TB | lineage2.2.1 | None | SRR9971122 | MDR-TB | lineage4.8 | None | DRR184982 | RR-TB | lineage2.2.1 | None | ERR323044 | HR-TB | lineage4.3.4.2.1 | None | ERR323048 | Pre-XDR-TB | lineage4.9 | None | ERR108125 | Pre-XDR-TB | lineage4.9 | None | ERR036207 | Other | lineage4.9 | None | DRR213597 | MDR-TB | lineage2.2.2 | None | ERR1034647 | MDR-TB | lineage4.1.1.3 | None | ERR10762275 | MDR-TB | lineage4.2.1 | None | ERR3283013 | MDR-TB | lineage4 | None | ERR126597 | MDR-TB | lineage4.4.1.2 | None | ERR3283006 | RR-TB | lineage4.9 | None | ERR3283015 | Sensitive | lineage4.9 | None | ERR3283046 | MDR-TB | lineage4.9 | None | ERR3283049 | Sensitive | lineage4.9 | None | ERR3283051 | Other | lineage4.9 | None | ERR3797084 | Sensitive | lineage4.9 | None | ERR3468609 | Other | La1.8.1 | None | ERR3468644 | HR-TB | La1.8.1 | None | ERR3797074 | Sensitive | lineage4.9 | None | ERR3439265 | Other | lineage4.9 | None | ERR3445487 | Other | La1.7.X-unk4 | None | ERR3797062 | RR-TB | lineage4.9 | None | ERR3797065 | MDR-TB | lineage4 | None | ERR400350 | Sensitive | lineage4.9 | None | ERR4188213 | HR-TB | La1.8.1 | None | ERR4188222 | MDR-TB | La1.8.1 | None | ERR4808964 | RR-TB | lineage2.2.1 | None | ERR4596904 | MDR-TB | lineage3.1.1 | None | ERR4769517 | Other | La1.3 | None | ERR4769436 | Other | La1.3 | None | ERR4769508 | RR-TB | lineage4.9 | None | ERR4769516 | Other | La1.3 | None | ERR4769530 | RR-TB | lineage4.9 | None | ERR4796351 | MDR-TB | lineage4.9 | None | ERR4809333 | Pre-XDR-TB | lineage2.2.2 | None | ERR9029360 | MDR-TB | lineage2.2.1 | None | ERR4811035 | Pre-XDR-TB | lineage4.5;lineage2.2.1 | None | ERR5917985 | MDR-TB | lineage2.2.1 | None | ERR751317 | Sensitive | lineage4.9 | None | ERR7801175 | RR-TB | lineage4.6.5 | None | ERR7801176 | RR-TB | lineage4.6.5 | None | ERR7911082 | MDR-TB | lineage2.2.1 | md | ERR8975534 | Sensitive | lineage4.3.4.2.1 | None | SRR1049560 | MDR-TB | lineage4.3.4.2.1 | None | ERR9285979 | RR-TB | lineage3.1.1 | None | ERR9992879 | XDR-TB | lineage4.3.3 | None | SRR10315558 | Sensitive | lineage2.2.1 | None | SRR10315567 | Other | lineage2.2.1 | None | ERR970449 | RR-TB | lineage4.1.1.3 | None | ERR9786164 | RR-TB | lineage4.1.1.3 | None | ERR987707 | MDR-TB | lineage4.7 | None | ERR9992784 | Pre-XDR-TB | lineage2.2.2 | None | SRR1049675 | HR-TB | lineage2.2.1 | None | SRR1049581 | MDR-TB | lineage4.6.1.2 | None | SRR1049673 | Pre-XDR-TB | lineage3 | None | SRR1049559 | MDR-TB | lineage4.3.4.2.1 | None | SRR1049582 | MDR-TB | lineage4.6.1.2 | None | SRR1049672 | Other | lineage3 | None | SRR1049677 | MDR-TB | lineage4.8;lineage4.3.3 | None | SRR1049676 | MDR-TB | lineage4.8;lineage4.3.3 | None | SRR1049674 | HR-TB | lineage2.2.1 | None | SRR1049726 | MDR-TB | lineage4.4.1.1;lineage4.1.2.1 | None | SRR1049725 | RR-TB | lineage4.1.2.1 | None | SRR1062928 | RR-TB | lineage4 | None | SRR1062871 | MDR-TB | lineage4.3.4.2.1 | None | SRR1062880 | MDR-TB | lineage4.6.1.2 | None | SRR1062919 | HR-TB | lineage2.2.1 | None | SRR1062918 | Pre-XDR-TB | lineage3 | None | SRR1062920 | MDR-TB | lineage4.8;lineage4.3.3 | None | SRR11342634 | MDR-TB | lineage4.8 | None | SRR10993951 | RR-TB | La1.6 | None | SRR1140712 | MDR-TB | lineage4.6.1.2 | None | SRR11349147 | RR-TB | lineage4.3.2.1 | None | SRR1140574 | MDR-TB | lineage4.8;lineage4.3.3 | None | SRR1140724 | HR-TB | lineage2.2.1 | None | SRR1140716 | Pre-XDR-TB | lineage3 | None | SRR1173281 | RR-TB | lineage3 | None | SRR1173170 | Other | lineage4.9 | None | SRR1140736 | RR-TB | None | SRR1140753 | MDR-TB | lineage4.3.4.2.1 | None | SRR1173310 | MDR-TB | None | SRR1173719 | HR-TB | lineage3 | None | SRR1173515 | HR-TB | lineage4.9 | None | SRR1175472 | MDR-TB | lineage4 | None | SRR1173770 | Other | lineage4.9 | None | SRR1175473 | Other | lineage4.9 | None | SRR1173740 | Other | None | SRR1175474 | HR-TB | lineage4.9 | None | SRR1175491 | MDR-TB | lineage4 | None | SRR1180440 | Other | lineage4.9 | None | SRR13861138 | RR-TB | lineage4.9 | None | SRR1184308 | Sensitive | lineage4.9 | None | SRR11972425 | Pre-XDR-TB | lineage2.2.1 | None | SRR1180446 | Other | lineage4.9 | None | SRR1196545 | HR-TB | lineage4.9 | None | SRR12634609 | MDR-TB | lineage3.1.1 | None | SRR13861154 | RR-TB | lineage4.9 | None | SRR13861149 | RR-TB | lineage4.9 | None | SRR13861140 | MDR-TB | lineage4.9 | None | SRR13861152 | Sensitive | lineage4.9 | None | SRR13861170 | RR-TB | lineage4.9 | None | SRR13861200 | Other | lineage4.9 | None | SRR13861186 | Other | lineage4.9 | None | SRR13861197 | RR-TB | lineage4.9 | None | SRR13861169 | RR-TB | lineage4.9 | None | SRR13861202 | RR-TB | lineage4.9 | None | SRR13861199 | RR-TB | lineage4.9 | None | SRR13861218 | RR-TB | lineage4.9 | None | SRR13861216 | RR-TB | lineage4.9 | None | SRR13861222 | RR-TB | lineage4.9 | None | SRR13861232 | RR-TB | lineage4.9 | None | SRR13861267 | Other | lineage4.9 | None | SRR13861262 | RR-TB | lineage4.9 | None | SRR13861233 | RR-TB | lineage4.9 | None | SRR13861245 | RR-TB | lineage4.9 | None | SRR13861261 | Sensitive | lineage4.9 | None | SRR13861276 | RR-TB | lineage4.9 | None | SRR13861277 | RR-TB | lineage4.9 | None | SRR13861310 | RR-TB | lineage4.9 | None | SRR13861281 | Other | lineage4.9 | None | SRR13861292 | RR-TB | lineage4.9 | None | SRR13861284 | RR-TB | lineage4.9 | None | SRR13861393 | Sensitive | lineage4.9 | None | SRR13861316 | RR-TB | lineage4.9 | None | SRR13861321 | RR-TB | lineage4.9 | None | SRR13861338 | Sensitive | lineage4.9 | None | SRR13861368 | RR-TB | lineage4.9 | None | SRR13861375 | Other | lineage4.9 | None | SRR13861386 | HR-TB | lineage4.9 | None | SRR13861389 | Other | lineage4.9 | None | SRR13861320 | RR-TB | lineage4.9 | None | SRR13861337 | RR-TB | lineage4.9 | None | SRR13861341 | RR-TB | lineage4.9 | None | SRR13861357 | RR-TB | lineage4.9 | None | SRR13861385 | Sensitive | lineage4.9 | None | SRR13861408 | MDR-TB | lineage4.9 | None | SRR13861406 | MDR-TB | lineage4.9 | None | SRR13861543 | RR-TB | lineage4.9 | None | SRR13861424 | RR-TB | lineage4.9 | None | SRR13861443 | RR-TB | lineage4.9 | None | SRR13861450 | RR-TB | lineage4.9 | None | SRR13861458 | MDR-TB | lineage4.9 | None | SRR13861463 | Other | lineage4.9 | None | SRR13861481 | RR-TB | lineage4.9 | None | SRR13861484 | RR-TB | lineage4.9 | None | SRR13861494 | Other | lineage4.9 | None | SRR13861501 | RR-TB | lineage4.9 | None | SRR13861500 | RR-TB | lineage4.9 | None | SRR13861513 | RR-TB | lineage4.9 | None | SRR13861520 | RR-TB | lineage4.9 | None | SRR13861524 | RR-TB | lineage4.9 | None | SRR13861451 | RR-TB | lineage4.9 | None | SRR13861474 | Sensitive | lineage4.9 | None | SRR13861486 | Other | lineage4.9 | None | SRR13861488 | RR-TB | lineage4.9 | None | SRR13861495 | MDR-TB | lineage4.9 | None | SRR13861503 | Other | lineage4.9 | None | SRR13861549 | RR-TB | lineage4.9 | None | SRR13861547 | RR-TB | lineage4.9 | None | SRR13861571 | RR-TB | lineage4.9 | None | SRR13861563 | RR-TB | lineage4.9 | None | SRR13861560 | RR-TB | lineage4.9 | None | SRR13861570 | Other | lineage4.9 | None | SRR13861561 | RR-TB | lineage4.9 | None | SRR13861590 | RR-TB | lineage4.9 | None | SRR13861585 | RR-TB | lineage4.9 | None | SRR13861631 | RR-TB | lineage4.9 | None | SRR13861603 | RR-TB | lineage4.9 | None | SRR13861618 | RR-TB | lineage4.9 | None | SRR13861632 | MDR-TB | lineage4.9 | None | SRR13861638 | Sensitive | lineage4.9 | None | SRR13861629 | RR-TB | lineage4.9 | None | SRR13861650 | Sensitive | lineage4.9 | None | SRR13861663 | Sensitive | lineage4.9 | None | SRR13861662 | RR-TB | lineage4.9 | None | SRR13861686 | RR-TB | lineage4.9 | None | SRR13861699 | Sensitive | lineage4.9 | None | SRR13861701 | RR-TB | lineage4.9 | None | SRR13861730 | Sensitive | lineage4.9 | None | SRR13861722 | RR-TB | lineage4.9 | None | SRR13861729 | RR-TB | lineage4.9 | None | SRR13861737 | RR-TB | lineage4.9 | None | SRR13861736 | RR-TB | lineage4.9 | None | SRR14334194 | Pre-XDR-TB | lineage2.2.1 | None |
|---|
