EBG00000313339 - n.694G>C
Drug resistance types
48 Sensitive
20 RR-TB
37 HR-TB
21 MDR-TB
21 Pre-XDR-TB
0 XDR-TB
102 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.1.1 | 1 |
| lineage4.1.2.1 | 14 |
| lineage2.2 | 8 |
| lineage2.2.1 | 14 |
| lineage4.9 | 84 |
| lineage4.8 | 6 |
| lineage4.1.1.2 | 1 |
| lineage1.2.1.1 | 1 |
| lineage4.6.2.2 | 2 |
| lineage4 | 10 |
| lineage3 | 17 |
| lineage3.1.2.1 | 1 |
| lineage4.1.3 | 1 |
| 22 | |
| lineage1.1.2 | 2 |
| lineage4.1 | 2 |
| lineage4.4.1.1 | 3 |
| lineage4.3.4.2 | 2 |
| lineage4.3.2 | 1 |
| lineage4.5 | 3 |
| lineage4.1.1.3 | 2 |
| lineage1.1.1 | 2 |
| lineage4.3.4.2.1 | 5 |
| lineage1.1.3.1 | 1 |
| lineage4.6.3 | 1 |
| lineage4.9;lineage4.2.1 | 1 |
| lineage3.1.2.2 | 2 |
| lineage4.3.1.1 | 1 |
| lineage4.1.4 | 1 |
| lineage4.3.3 | 2 |
| La1.8.1 | 4 |
| lineage4.8.1 | 1 |
| La1.2 | 5 |
| lineage2.2.2 | 1 |
| lineage4.4.2 | 2 |
| lineage6.2.3;lineage1.1.2 | 1 |
| La1.3 | 1 |
| lineage4.9;La1.3 | 1 |
| lineage1.1.1.1 | 1 |
| lineage6 | 1 |
| lineage4.7 | 1 |
| lineage4.8;lineage4.3.3 | 4 |
| lineage4.4.1.1;lineage4.1.2.1 | 1 |
| lineage4.4.1.1.1 | 2 |
| lineage4.9;lineage2.2 | 1 |
| lineage2 | 1 |
| lineage3.1.1 | 1 |
| lineage4.3.4.1 | 1 |
| lineage7;lineage2.2.1.2 | 1 |
| La1.4 | 1 |
| lineage1.2.1.2 | 1 |
| La1.7.1 | 3 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 249 |
Geographic prevalence
Country level data for this variant is available for 23 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR4814524 | Other | lineage4.1.1 | gb | ERR4815783 | Other | lineage4.1.2.1 | gb | SRR3601585 | Pre-XDR-TB | lineage2.2 | None | SRR3619841 | Pre-XDR-TB | lineage2.2.1 | None | SRR3619764 | Pre-XDR-TB | lineage2.2 | None | ERR4815714 | Sensitive | lineage4.1.2.1 | gb | SRR3618864 | Pre-XDR-TB | lineage2.2.1 | None | ERR4815471 | Other | lineage4.9 | None | ERR4814905 | Other | lineage4.8 | gb | ERR1750909 | RR-TB | lineage4.1.1.2 | None | SRR3675245 | Other | lineage4.1.2.1 | None | SRR3675261 | Other | lineage1.2.1.1 | None | ERR4814855 | HR-TB | lineage4.6.2.2 | gb | ERR4813263 | MDR-TB | lineage4.8 | None | ERR4814976 | Other | lineage4.9 | None | ERR4815550 | Other | lineage4 | None | ERR2446509 | Other | lineage3 | nl | ERR4815022 | Other | lineage3.1.2.1 | None | ERR4816198 | Sensitive | lineage4.1.3 | None | ERR4816231 | Other | lineage4 | None | ERR212034 | HR-TB | None | ERR4816322 | Other | lineage4.9 | None | ERR4816417 | Other | lineage4.9 | None | ERR216965 | HR-TB | lineage4.9 | None | ERR4816571 | Other | lineage1.1.2 | None | ERR4816852 | Other | lineage4.9 | None | ERR2229369 | Other | lineage4.8 | None | ERR4816702 | RR-TB | lineage4.6.2.2 | None | ERR4816729 | Sensitive | lineage4.9 | None | ERR2446566 | Other | lineage4.1 | None | ERR4817948 | Other | lineage3 | gb | ERR4816868 | Other | lineage4.4.1.1 | None | ERR4818646 | Sensitive | lineage4.1.2.1 | None | SAMN02380982 | MDR-TB | lineage4.3.4.2 | None | ERR4818710 | Sensitive | lineage4.9 | None | ERR4818107 | Sensitive | lineage3 | None | ERR4818261 | Other | lineage1.1.2 | None | ERR4818831 | Other | lineage3 | None | ERR2512599 | Other | lineage3 | gb | ERR4818272 | Other | lineage4.3.2 | None | ERR4818904 | Other | lineage4.8 | None | SRR5341412 | Pre-XDR-TB | lineage3 | None | ERR2503426 | Sensitive | lineage4.1.2.1 | None | ERR4818432 | HR-TB | lineage4.5 | gb | ERR2503533 | Other | lineage4.1.2.1 | fi | ERR2513709 | Sensitive | lineage4.1 | gb | ERR4819175 | Other | lineage4.1.1.3 | gb | ERR4819357 | Other | lineage4.9 | None | ERR4818536 | Other | lineage4.9 | None | ERR4818952 | Other | lineage3 | None | ERR4817554 | Other | lineage1.1.1 | None | SRR5341267 | Pre-XDR-TB | lineage3 | None | ERR4819462 | Other | lineage4 | None | ERR2514215 | Other | lineage2.2.1 | gb | ERR2514328 | Sensitive | lineage4.1.2.1 | gb | SRR5341456 | Other | None | ERR4820484 | Other | lineage4.8 | None | ERR4819383 | RR-TB | lineage4.9 | None | ERR4819933 | Other | lineage4.9 | None | ERR4819863 | RR-TB | lineage4.9 | None | ERR4819876 | HR-TB | lineage4.3.4.2.1 | None | ERR6359082 | Other | lineage4.9 | None | ERR4820030 | Other | lineage4.9 | None | ERR4820161 | Other | lineage3 | None | SRR5341330 | HR-TB | None | ERR4820193 | Other | lineage3 | None | SRR5341341 | Pre-XDR-TB | lineage2.2.1 | None | ERR4822138 | Other | lineage4.1.2.1 | None | ERR4821811 | RR-TB | lineage4.9 | None | ERR2660539 | Other | lineage4.9 | None | ERR4821154 | Other | lineage2.2.1 | gb | ERR4821272 | RR-TB | lineage4.1.2.1 | None | ERR2693238 | HR-TB | lineage4.9 | None | ERR4821519 | Other | lineage3 | gb | ERR4822203 | Sensitive | lineage4.4.1.1 | gb | ERR4821616 | Other | lineage1.1.3.1 | None | SRR6045572 | Sensitive | lineage4.6.3 | gb | ERR4821747 | MDR-TB | lineage4.9;lineage4.2.1 | None | ERR2693227 | Other | lineage4.9 | None | SRR6045620 | Other | lineage3 | None | SRR6046291 | Other | lineage3 | None | SRR6045642 | Other | lineage3.1.2.2 | None | SRR6045053 | Other | None | SRR6045124 | Other | lineage4.9 | None | SRR6046044 | Sensitive | lineage4.3.1.1 | gb | SRR6046046 | Other | None | SRR6045267 | RR-TB | lineage4 | None | SRR6045217 | Other | lineage4 | None | SRR6046250 | Other | lineage4.9 | None | ERR4830778 | Pre-XDR-TB | lineage4.5 | None | SRR6046299 | HR-TB | None | ERR4828962 | Other | lineage4.1.4 | it | SRR6046737 | Other | lineage4.9 | None | SRR6046492 | Other | None | SRR6046508 | Sensitive | lineage3.1.2.2 | gb | ERR502473 | Pre-XDR-TB | lineage4.9 | None | ERR323037 | HR-TB | lineage4 | None | ERR485006 | HR-TB | lineage4.9 | None | ERR4831117 | HR-TB | None | ERR3275190 | Other | lineage3 | nl | ERR502474 | Pre-XDR-TB | lineage4.9 | None | ERR502478 | RR-TB | lineage4.9 | None | ERR502479 | RR-TB | lineage4.9 | None | ERR502481 | Pre-XDR-TB | lineage4.9 | None | SRR6832644 | Other | lineage4.3.3 | None | SRR9971080 | RR-TB | lineage2.2.1 | None | ERR5087486 | Other | La1.8.1 | None | ERR5087596 | Other | La1.8.1 | None | SRR8217918 | HR-TB | None | SRR8651616 | MDR-TB | lineage2.2.1 | None | SRR9971150 | RR-TB | lineage4.8.1 | None | SRR7851312 | Other | La1.2 | None | DRR184629 | Other | lineage2.2.1 | None | DRR184982 | RR-TB | lineage2.2.1 | None | DRR185024 | Other | lineage2.2.2 | None | DRR188519 | Other | lineage4.4.2 | None | ERR036207 | Other | lineage4.9 | None | ERR3324368 | RR-TB | lineage6.2.3;lineage1.1.2 | None | ERR1063839 | HR-TB | lineage2.2 | None | ERR1063857 | HR-TB | None | ERR3283055 | HR-TB | None | ERR3283048 | HR-TB | lineage4.9 | None | ERR4769419 | Other | lineage4.9 | None | ERR473334 | HR-TB | lineage4.9 | None | ERR473367 | Sensitive | lineage4.9 | None | ERR4769421 | Other | La1.2 | None | ERR3445504 | HR-TB | None | ERR3797046 | HR-TB | None | ERR4769427 | Other | La1.2 | None | ERR4769418 | Other | La1.2 | None | ERR4769433 | Pre-XDR-TB | lineage4.9 | None | ERR4769452 | HR-TB | None | ERR4769436 | Other | La1.3 | None | ERR4769457 | Other | lineage4.9 | None | ERR4769472 | Other | lineage4.9 | None | ERR4769450 | HR-TB | None | ERR4799025 | Pre-XDR-TB | None | ERR4769497 | HR-TB | La1.2 | None | ERR4769521 | HR-TB | None | ERR4769493 | Pre-XDR-TB | lineage4.9;La1.3 | None | ERR6359070 | Other | lineage4.9 | None | ERR4810624 | HR-TB | lineage2.2 | None | ERR4811493 | HR-TB | None | ERR5917972 | MDR-TB | lineage4.4.1.1 | za | ERR6197028 | Other | lineage4.9 | None | ERR6197044 | RR-TB | lineage4.9 | None | ERR4799513 | HR-TB | lineage2.2 | None | ERR6197030 | Other | lineage4.9 | None | ERR6866125 | Sensitive | lineage4.1.2.1 | None | ERR6359069 | Other | lineage4.9 | None | ERR736831 | HR-TB | lineage4.9 | None | ERR6866807 | HR-TB | lineage4 | None | ERR752229 | Other | lineage4.5 | None | ERR752012 | HR-TB | lineage1.1.1.1 | None | ERR9786346 | Sensitive | lineage4.3.4.2 | None | ERR9786164 | RR-TB | lineage4.1.1.3 | None | SRR10315751 | MDR-TB | lineage4.8 | None | ERR9786705 | Sensitive | lineage4.1.2.1 | None | ERR9787030 | Sensitive | lineage6 | None | ERR987707 | MDR-TB | lineage4.7 | None | SRR1049560 | MDR-TB | lineage4.3.4.2.1 | None | SRR1049672 | Other | lineage3 | None | SRR1049559 | MDR-TB | lineage4.3.4.2.1 | None | SRR1062871 | MDR-TB | lineage4.3.4.2.1 | None | SRR1049676 | MDR-TB | lineage4.8;lineage4.3.3 | None | SRR1049725 | RR-TB | lineage4.1.2.1 | None | SRR1049677 | MDR-TB | lineage4.8;lineage4.3.3 | None | SRR1049726 | MDR-TB | lineage4.4.1.1;lineage4.1.2.1 | None | SRR11349145 | Pre-XDR-TB | lineage4.4.1.1.1 | None | SRR1062918 | Pre-XDR-TB | lineage3 | None | SRR1062920 | MDR-TB | lineage4.8;lineage4.3.3 | None | SRR1062928 | RR-TB | lineage4 | None | SRR11349211 | Pre-XDR-TB | lineage4.3.3 | None | SRR1140574 | MDR-TB | lineage4.8;lineage4.3.3 | None | SRR1140716 | Pre-XDR-TB | lineage3 | None | SRR1173185 | HR-TB | lineage4.9 | None | SRR1140753 | MDR-TB | lineage4.3.4.2.1 | None | SRR1172717 | Other | lineage4.9 | None | SRR1172987 | HR-TB | lineage4.9 | None | SRR1173170 | Other | lineage4.9 | None | SRR1140736 | RR-TB | None | SRR1172807 | Sensitive | lineage4.9 | None | SRR1173450 | RR-TB | lineage4.9 | None | SRR1173385 | Sensitive | lineage4.9 | None | SRR1173770 | Other | lineage4.9 | None | SRR1173740 | Other | None | SRR1173515 | HR-TB | lineage4.9 | None | SRR1180250 | Other | lineage4.9 | None | SRR1175473 | Other | lineage4.9 | None | SRR1175491 | MDR-TB | lineage4 | None | SRR1175487 | Sensitive | lineage4.9 | None | SRR1180148 | Sensitive | lineage4.9 | None | SRR1175472 | MDR-TB | lineage4 | None | SRR1175506 | Sensitive | lineage4.9 | None | SRR1175512 | Sensitive | lineage4.9 | None | SRR1175513 | Other | lineage4.9 | None | SRR1180319 | Sensitive | lineage4.9 | None | SRR1180300 | Sensitive | lineage4.9 | None | SRR1180312 | Sensitive | lineage4.9 | None | SRR1180355 | Sensitive | lineage4.9 | None | SRR1180345 | Other | lineage4.9 | None | SRR1180375 | Sensitive | lineage4.9 | None | SRR1180391 | Sensitive | lineage4.9 | None | SRR1180399 | Sensitive | lineage4.9 | None | SRR1181237 | Sensitive | lineage2.2 | None | SRR1180406 | Sensitive | lineage4.9 | None | SRR1180410 | Sensitive | lineage4.9;lineage2.2 | None | SRR1180420 | Sensitive | lineage4.9 | None | SRR1180444 | Sensitive | lineage4.9 | None | SRR1180977 | Sensitive | lineage4.9 | None | SRR1180413 | Sensitive | lineage4.9 | None | SRR1181214 | Other | lineage4.9 | None | SRR1181368 | Other | lineage4.9 | None | SRR1181325 | Sensitive | lineage4.9 | None | SRR1181349 | Sensitive | lineage4.4.1.1.1 | None | SRR1181283 | Sensitive | lineage4.9 | None | SRR1181351 | Sensitive | lineage4.9 | None | SRR1181390 | Sensitive | lineage2 | None | SRR11972369 | Pre-XDR-TB | lineage2.2.1 | None | SRR1181402 | Sensitive | lineage4.9 | None | SRR1183054 | Sensitive | lineage4.9 | None | SRR1184021 | Sensitive | lineage4.9 | None | SRR1184308 | Sensitive | lineage4.9 | None | SRR1196545 | HR-TB | lineage4.9 | None | SRR1184329 | MDR-TB | lineage4.9 | None | SRR1196478 | MDR-TB | lineage4.9 | None | SRR14334194 | Pre-XDR-TB | lineage2.2.1 | None | SRR11972425 | Pre-XDR-TB | lineage2.2.1 | None | SRR12634609 | MDR-TB | lineage3.1.1 | None | SRR14782405 | HR-TB | None | SRR16156775 | Other | lineage4.9 | None | SRR15316595 | RR-TB | lineage4.4.2 | None | SRR15508556 | Other | lineage4.3.4.1 | None | SRR20969708 | HR-TB | lineage2.2 | None | SRR1792022 | Other | La1.8.1 | None | SRR18003031 | HR-TB | lineage2.2.1 | None | SRR18549032 | HR-TB | lineage7;lineage2.2.1.2 | None | SRR16278274 | Other | La1.4 | None | SRR1792011 | Other | La1.8.1 | None | SRR20969475 | Other | lineage1.2.1.2 | None | SRR20969731 | Other | lineage2.2.1 | None | SRR21240055 | Other | lineage4.1.2.1 | None | SRR20970016 | Other | lineage2.2 | None | ERR4815310 | Other | None | SRR21469201 | Other | La1.7.1 | None | SRR21469202 | Other | La1.7.1 | None | SRR21686597 | Sensitive | lineage4.1.2.1 | None | SRR21469200 | Other | La1.7.1 | None | SRR21658550 | Other | lineage1.1.1 | None |
|---|
