EBG00000313339 - n.694G>C


Drug resistance types
42 Sensitive 20 RR-TB 35 HR-TB 21 MDR-TB 21 Pre-XDR-TB 0 XDR-TB 92 Other
lineage Counts
lineage Count
lineage4.9 84
22
La1.2 5
La1.3 1
lineage4.9;La1.3 1
lineage2.2 8
lineage4.4.1.1 2
lineage1.1.1.1 1
lineage4.1.2.1 10
lineage4 10
lineage4.3.4.2 2
lineage4.5 2
lineage4.1.1.3 2
lineage4.7 1
lineage6 1
lineage4.8;lineage4.3.3 4
lineage3 14
lineage4.8 5
lineage4.3.4.2.1 5
lineage4.4.1.1;lineage4.1.2.1 1
lineage4.4.1.1.1 2
lineage4.3.3 2
lineage4.9;lineage2.2 1
lineage2 1
lineage3.1.1 1
lineage2.2.1 12
lineage4.4.2 2
lineage4.3.4.1 1
La1.4 1
La1.7.1 3
La1.8.1 4
lineage7;lineage2.2.1.2 1
lineage1.2.1.2 1
lineage1.1.1 2
lineage4.1.1.2 1
lineage1.2.1.1 1
lineage4.1.3 1
lineage3.1.2.1 1
lineage1.1.2 2
lineage4.6.2.2 1
lineage4.1 1
lineage4.3.2 1
lineage1.1.3.1 1
lineage4.9;lineage4.2.1 1
lineage3.1.2.2 1
lineage4.1.4 1
lineage2.2.2 1
lineage4.8.1 1
lineage6.2.3;lineage1.1.2 1
spoligotype Counts
spoligotype Count
None 231
Geographic prevalence
Country level data for this variant is available for 5 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR4769419 Other lineage4.9 None
ERR3797046 HR-TB None
ERR473334 HR-TB lineage4.9 None
ERR473367 Sensitive lineage4.9 None
ERR4769427 Other La1.2 None
ERR4769421 Other La1.2 None
ERR4769418 Other La1.2 None
ERR4769433 Pre-XDR-TB lineage4.9 None
ERR4769457 Other lineage4.9 None
ERR4769436 Other La1.3 None
ERR4769452 HR-TB None
ERR4769450 HR-TB None
ERR4769493 Pre-XDR-TB lineage4.9;La1.3 None
ERR4769472 Other lineage4.9 None
ERR4769497 HR-TB La1.2 None
ERR4799513 HR-TB lineage2.2 None
ERR4799025 Pre-XDR-TB None
ERR4769521 HR-TB None
ERR6359069 Other lineage4.9 None
ERR5917972 MDR-TB lineage4.4.1.1 za
ERR4811493 HR-TB None
ERR6197028 Other lineage4.9 None
ERR6197044 RR-TB lineage4.9 None
ERR4810624 HR-TB lineage2.2 None
ERR6197030 Other lineage4.9 None
ERR6359070 Other lineage4.9 None
ERR752012 HR-TB lineage1.1.1.1 None
ERR6866125 Sensitive lineage4.1.2.1 None
ERR6866807 HR-TB lineage4 None
ERR736831 HR-TB lineage4.9 None
ERR9786346 Sensitive lineage4.3.4.2 None
ERR752229 Other lineage4.5 None
ERR9786164 RR-TB lineage4.1.1.3 None
ERR987707 MDR-TB lineage4.7 None
ERR9786705 Sensitive lineage4.1.2.1 None
ERR9787030 Sensitive lineage6 None
SRR1049676 MDR-TB lineage4.8;lineage4.3.3 None
SRR1049672 Other lineage3 None
SRR10315751 MDR-TB lineage4.8 None
SRR1049560 MDR-TB lineage4.3.4.2.1 None
SRR1049559 MDR-TB lineage4.3.4.2.1 None
SRR1049726 MDR-TB lineage4.4.1.1;lineage4.1.2.1 None
SRR1049677 MDR-TB lineage4.8;lineage4.3.3 None
SRR1049725 RR-TB lineage4.1.2.1 None
SRR1062918 Pre-XDR-TB lineage3 None
SRR1062871 MDR-TB lineage4.3.4.2.1 None
SRR1140736 RR-TB None
SRR1062920 MDR-TB lineage4.8;lineage4.3.3 None
SRR11349145 Pre-XDR-TB lineage4.4.1.1.1 None
SRR1140574 MDR-TB lineage4.8;lineage4.3.3 None
SRR1140716 Pre-XDR-TB lineage3 None
SRR1062928 RR-TB lineage4 None
SRR11349211 Pre-XDR-TB lineage4.3.3 None
SRR1172807 Sensitive lineage4.9 None
SRR1140753 MDR-TB lineage4.3.4.2.1 None
SRR1172717 Other lineage4.9 None
SRR1172987 HR-TB lineage4.9 None
SRR1173170 Other lineage4.9 None
SRR1173385 Sensitive lineage4.9 None
SRR1173185 HR-TB lineage4.9 None
SRR1173740 Other None
SRR1173450 RR-TB lineage4.9 None
SRR1173515 HR-TB lineage4.9 None
SRR1173770 Other lineage4.9 None
SRR1175472 MDR-TB lineage4 None
SRR1175473 Other lineage4.9 None
SRR1175512 Sensitive lineage4.9 None
SRR1175491 MDR-TB lineage4 None
SRR1175487 Sensitive lineage4.9 None
SRR1175506 Sensitive lineage4.9 None
SRR1180148 Sensitive lineage4.9 None
SRR1175513 Other lineage4.9 None
SRR1180250 Other lineage4.9 None
SRR1180355 Sensitive lineage4.9 None
SRR1180312 Sensitive lineage4.9 None
SRR1180319 Sensitive lineage4.9 None
SRR1180300 Sensitive lineage4.9 None
SRR1180345 Other lineage4.9 None
SRR1180375 Sensitive lineage4.9 None
SRR1180391 Sensitive lineage4.9 None
SRR1180406 Sensitive lineage4.9 None
SRR1180399 Sensitive lineage4.9 None
SRR1180420 Sensitive lineage4.9 None
SRR1180410 Sensitive lineage4.9;lineage2.2 None
SRR1180413 Sensitive lineage4.9 None
SRR1181214 Other lineage4.9 None
SRR1180444 Sensitive lineage4.9 None
SRR1180977 Sensitive lineage4.9 None
SRR1181325 Sensitive lineage4.9 None
SRR1181283 Sensitive lineage4.9 None
SRR1181237 Sensitive lineage2.2 None
SRR1181351 Sensitive lineage4.9 None
SRR1181349 Sensitive lineage4.4.1.1.1 None
SRR1181402 Sensitive lineage4.9 None
SRR1181368 Other lineage4.9 None
SRR1181390 Sensitive lineage2 None
SRR1183054 Sensitive lineage4.9 None
SRR1184308 Sensitive lineage4.9 None
SRR1184021 Sensitive lineage4.9 None
SRR1196478 MDR-TB lineage4.9 None
SRR1184329 MDR-TB lineage4.9 None
SRR1196545 HR-TB lineage4.9 None
SRR12634609 MDR-TB lineage3.1.1 None
SRR11972369 Pre-XDR-TB lineage2.2.1 None
SRR11972425 Pre-XDR-TB lineage2.2.1 None
SRR15316595 RR-TB lineage4.4.2 None
SRR14334194 Pre-XDR-TB lineage2.2.1 None
SRR14782405 HR-TB None
SRR15508556 Other lineage4.3.4.1 None
SRR16278274 Other La1.4 None
SRR16156775 Other lineage4.9 None
SRR21469200 Other La1.7.1 None
SRR1792011 Other La1.8.1 None
SRR18003031 HR-TB lineage2.2.1 None
SRR18549032 HR-TB lineage7;lineage2.2.1.2 None
SRR20969731 Other lineage2.2.1 None
SRR20969708 HR-TB lineage2.2 None
SRR21469201 Other La1.7.1 None
SRR1792022 Other La1.8.1 None
SRR20969475 Other lineage1.2.1.2 None
SRR20970016 Other lineage2.2 None
SRR21240055 Other lineage4.1.2.1 None
ERR4815550 Other lineage4 None
SRR21469202 Other La1.7.1 None
ERR4815310 Other None
SRR3601585 Pre-XDR-TB lineage2.2 None
SRR3618864 Pre-XDR-TB lineage2.2.1 None
SRR3675245 Other lineage4.1.2.1 None
SRR21658550 Other lineage1.1.1 None
SRR21686597 Sensitive lineage4.1.2.1 None
SRR3619841 Pre-XDR-TB lineage2.2.1 None
SRR3619764 Pre-XDR-TB lineage2.2 None
ERR4815471 Other lineage4.9 None
ERR1750909 RR-TB lineage4.1.1.2 None
SRR3675261 Other lineage1.2.1.1 None
ERR4813263 MDR-TB lineage4.8 None
ERR4816198 Sensitive lineage4.1.3 None
ERR4815022 Other lineage3.1.2.1 None
ERR4814976 Other lineage4.9 None
ERR212034 HR-TB None
ERR4816231 Other lineage4 None
ERR4816322 Other lineage4.9 None
ERR216965 HR-TB lineage4.9 None
ERR4816417 Other lineage4.9 None
SAMN02380982 MDR-TB lineage4.3.4.2 None
ERR4816571 Other lineage1.1.2 None
ERR4816852 Other lineage4.9 None
ERR2229369 Other lineage4.8 None
ERR4816702 RR-TB lineage4.6.2.2 None
ERR4816729 Sensitive lineage4.9 None
ERR4816868 Other lineage4.4.1.1 None
ERR4818646 Sensitive lineage4.1.2.1 None
ERR4818831 Other lineage3 None
ERR4818710 Sensitive lineage4.9 None
ERR4818107 Sensitive lineage3 None
ERR2446566 Other lineage4.1 None
ERR3275190 Other lineage3 nl
ERR4818272 Other lineage4.3.2 None
ERR4818261 Other lineage1.1.2 None
ERR2503426 Sensitive lineage4.1.2.1 None
ERR4818904 Other lineage4.8 None
ERR4818952 Other lineage3 None
ERR4818536 Other lineage4.9 None
ERR4819383 RR-TB lineage4.9 None
ERR4819357 Other lineage4.9 None
SRR5341412 Pre-XDR-TB lineage3 None
ERR4817554 Other lineage1.1.1 None
ERR2446509 Other lineage3 nl
ERR4819462 Other lineage4 None
SRR5341456 Other None
SRR5341267 Pre-XDR-TB lineage3 None
ERR4819863 RR-TB lineage4.9 None
ERR4819876 HR-TB lineage4.3.4.2.1 None
ERR6359082 Other lineage4.9 None
SRR5341330 HR-TB None
SRR5341341 Pre-XDR-TB lineage2.2.1 None
ERR4820484 Other lineage4.8 None
ERR4819933 Other lineage4.9 None
ERR4820030 Other lineage4.9 None
ERR4820161 Other lineage3 None
ERR4820193 Other lineage3 None
ERR2693238 HR-TB lineage4.9 None
ERR2660539 Other lineage4.9 None
ERR4821811 RR-TB lineage4.9 None
ERR4821272 RR-TB lineage4.1.2.1 None
ERR4821616 Other lineage1.1.3.1 None
ERR4822138 Other lineage4.1.2.1 None
SRR6045620 Other lineage3 None
ERR4821747 MDR-TB lineage4.9;lineage4.2.1 None
ERR2693227 Other lineage4.9 None
SRR6045642 Other lineage3.1.2.2 None
SRR6045217 Other lineage4 None
SRR6045124 Other lineage4.9 None
SRR6045053 Other None
SRR6046046 Other None
SRR6046291 Other lineage3 None
SRR6045267 RR-TB lineage4 None
SRR6046250 Other lineage4.9 None
SRR6046299 HR-TB None
ERR485006 HR-TB lineage4.9 None
ERR4830778 Pre-XDR-TB lineage4.5 None
SRR6046737 Other lineage4.9 None
ERR323037 HR-TB lineage4 None
SRR6046492 Other None
ERR4828962 Sensitive lineage4.1.4 it
ERR502473 Pre-XDR-TB lineage4.9 None
ERR4831117 HR-TB None
SRR8217918 HR-TB None
ERR502474 Pre-XDR-TB lineage4.9 None
ERR502478 RR-TB lineage4.9 None
ERR502481 Pre-XDR-TB lineage4.9 None
SRR6832644 Other lineage4.3.3 None
ERR5087486 Other La1.8.1 None
ERR502479 RR-TB lineage4.9 None
ERR5087596 Other La1.8.1 None
ERR036207 Other lineage4.9 None
DRR185024 Other lineage2.2.2 None
SRR9971080 RR-TB lineage2.2.1 None
SRR8651616 MDR-TB lineage2.2.1 None
SRR9971150 RR-TB lineage4.8.1 None
SRR7851312 Other La1.2 None
DRR184629 Other lineage2.2.1 None
DRR184982 RR-TB lineage2.2.1 None
DRR188519 Other lineage4.4.2 None
ERR4819175 Other lineage4.1.1.3 gb
ERR1063839 HR-TB lineage2.2 None
ERR3283048 HR-TB lineage4.9 None
ERR3445504 HR-TB None
ERR1063857 HR-TB None
ERR3283055 HR-TB None
ERR3324368 RR-TB lineage6.2.3;lineage1.1.2 None