EBG00000313339 - n.1066G>A
Drug resistance types
6 Sensitive
14 RR-TB
4 HR-TB
17 MDR-TB
14 Pre-XDR-TB
1 XDR-TB
43 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.2.2.2 | 2 |
| lineage4.9 | 5 |
| lineage2.2.1 | 31 |
| lineage2.2.2 | 3 |
| lineage4.3.3 | 8 |
| lineage4.5 | 1 |
| lineage4.8 | 4 |
| La1.8.1 | 6 |
| lineage4.4.1.2 | 1 |
| lineage4.1.1.3 | 2 |
| lineage4.2.1.1 | 1 |
| La1.7.1 | 2 |
| lineage1.1.2;lineage6.2.3 | 1 |
| lineage3 | 3 |
| lineage2.2.1.1 | 2 |
| lineage3.1.1 | 1 |
| lineage4.3.4.1 | 1 |
| lineage2.2.1;lineage4.9 | 1 |
| lineage4.1.2.1 | 4 |
| lineage2.2.1;lineage4 | 1 |
| lineage4 | 2 |
| lineage4.3.4.2.1 | 1 |
| La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | 1 |
| lineage3.1.2.1;lineage4.9 | 1 |
| lineage1.2.2.2 | 1 |
| lineage4.3.4.2 | 2 |
| lineage4.3.2.1 | 1 |
| La2 | 1 |
| lineage4.4.1.1 | 1 |
| lineage4.2.2 | 1 |
| lineage4.1.1.1 | 1 |
| lineage4.4.2 | 4 |
| lineage4.1.3 | 1 |
| lineage4.8.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 99 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR867538 | Other | lineage4.2.2.2 | None | ERR867569 | Other | lineage4.9 | None | SRR3601585 | Pre-XDR-TB | lineage2.2.1 | None | SRR18002984 | MDR-TB | lineage2.2.2 | None | SRR6982141 | Other | lineage4.3.3 | None | SRR18003047 | MDR-TB | lineage2.2.1 | None | SRR18003007 | MDR-TB | lineage4.5 | None | SRR19303815 | Other | lineage4.8 | None | ERR3468488 | Other | La1.8.1 | None | ERR126597 | HR-TB | lineage4.4.1.2 | None | SRR3619841 | Pre-XDR-TB | lineage2.2.1 | None | SRR18002935 | Pre-XDR-TB | lineage2.2.1 | None | SRR18002980 | Other | lineage2.2.1 | None | ERR9786164 | RR-TB | lineage4.1.1.3 | None | SRR6785281 | Other | lineage4.2.1.1 | None | SRR21469202 | Other | La1.7.1 | None | ERR3324368 | RR-TB | lineage1.1.2;lineage6.2.3 | None | SRR18003023 | Other | lineage2.2.1 | None | SRR11342646 | HR-TB | lineage3 | None | SRR18003024 | RR-TB | lineage2.2.1 | None | SRR12062533 | Pre-XDR-TB | lineage2.2.1.1 | None | SRR12634609 | MDR-TB | lineage3.1.1 | None | SRR18003045 | Other | lineage2.2.1 | None | SRR15508556 | Other | lineage4.3.4.1 | None | SRR12708406 | HR-TB | lineage2.2.1;lineage4.9 | None | ERR867570 | RR-TB | lineage4.9 | None | SRR5007204 | Other | lineage4.1.2.1 | None | SRR29230823 | Sensitive | lineage4.3.3 | None | SRR18003009 | MDR-TB | lineage2.2.1 | None | SRR18002891 | MDR-TB | lineage2.2.1 | None | ERR867568 | Other | lineage2.2.1;lineage4 | None | SRR11342640 | MDR-TB | lineage4.3.3 | None | SRR18003042 | Other | lineage2.2.1 | None | SRR18002974 | Other | lineage2.2.1 | None | SRR3675565 | Other | lineage4 | None | SRR7069835 | Other | lineage2.2.1 | None | ERR4872322 | Pre-XDR-TB | lineage2.2.1 | None | SRR5818647 | Other | lineage4.3.4.2.1 | None | SRR11972417 | MDR-TB | lineage2.2.1 | None | SRR6046482 | Other | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | None | ERR2027290 | Other | lineage3.1.2.1;lineage4.9 | None | SRR6046484 | Other | lineage1.2.2.2 | None | SRR18002967 | HR-TB | lineage2.2.1 | None | ERR3439489 | RR-TB | La1.8.1 | None | SRR1792022 | Other | La1.8.1 | None | ERR9992879 | XDR-TB | lineage4.3.3 | None | SRR21686597 | Sensitive | lineage4.1.2.1 | None | SRR11342673 | RR-TB | lineage4.3.4.2 | None | SRR18003002 | MDR-TB | lineage2.2.1 | None | SRR18002981 | Other | lineage2.2.1 | None | SRR22424778 | RR-TB | lineage2.2.1.1 | None | SRR18002930 | MDR-TB | lineage2.2.1 | None | SRR11349147 | RR-TB | lineage4.3.2.1 | None | ERR10219876 | Other | lineage4.3.4.2 | None | SRR1792025 | Other | La1.8.1 | None | SRR19303820 | RR-TB | lineage4.8 | None | SRR3619764 | Pre-XDR-TB | lineage2.2.1 | None | SRR21727760 | Other | lineage2.2.1 | None | SRR3675265 | Other | lineage4 | None | SRR11342669 | Other | lineage4.8 | None | ERR5162090 | RR-TB | lineage4.9 | None | SRR11972425 | Pre-XDR-TB | lineage2.2.1 | None | SRR10851739 | Sensitive | lineage4.3.3 | None | ERR867555 | Other | lineage3 | None | SRR18002963 | Other | lineage2.2.1 | None | SRR7131147 | Other | lineage4.1.2.1 | None | SRR3675389 | Other | lineage4.9 | None | SRR13888750 | Other | La2 | None | SRR3675582 | Other | lineage4.9 | None | SRR18003046 | MDR-TB | lineage2.2.1 | None | SRR18003012 | Pre-XDR-TB | lineage2.2.1 | None | SRR7131145 | Other | lineage4.1.2.1 | None | SRR11342698 | RR-TB | lineage4.4.1.1 | None | ERR5311077 | Other | La1.8.1 | None | SRR16058249 | Sensitive | lineage4.2.2.2 | None | SRR18002994 | MDR-TB | lineage4.2.2 | None | SRR18003032 | Other | lineage2.2.1 | None | SRR8758877 | MDR-TB | lineage4.1.1.1 | None | SRR18002998 | Pre-XDR-TB | lineage2.2.2 | None | SRR1792011 | Other | La1.8.1 | None | SRR19303899 | Other | lineage3 | None | SRR21239974 | Sensitive | lineage4.3.3 | None | SRR9971122 | MDR-TB | lineage4.8 | None | SRR9971333 | MDR-TB | lineage4.1.1.3 | None | SRR13423546 | Other | lineage4.4.2 | None | SRR11342671 | RR-TB | lineage4.1.3 | None | SRR6045909 | Other | lineage4.8.1 | None | SRR12062493 | Pre-XDR-TB | lineage4.4.2 | None | SRR18003030 | Pre-XDR-TB | lineage2.2.1 | None | SRR18002874 | MDR-TB | lineage2.2.1 | None | SRR18003004 | Pre-XDR-TB | lineage2.2.2 | None | SRR11342649 | MDR-TB | lineage4.3.3 | None | SRR18003013 | Pre-XDR-TB | lineage4.4.2 | None | SRR18002941 | RR-TB | lineage2.2.1 | None | SRR21469200 | Other | La1.7.1 | None | SRR15316595 | RR-TB | lineage4.4.2 | None | SRR21239833 | Sensitive | lineage4.3.3 | None | DRR184982 | Other | lineage2.2.1 | None | SRR3618864 | Pre-XDR-TB | lineage2.2.1 | None |
|---|
