EBG00000313339 - n.1066G>A
Drug resistance types
13 Sensitive
27 RR-TB
5 HR-TB
26 MDR-TB
17 Pre-XDR-TB
1 XDR-TB
81 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage1.2.2.2 | 2 |
| lineage4.1.1.3 | 6 |
| lineage4.3 | 1 |
| lineage3.1.3 | 1 |
| lineage4.3.2 | 1 |
| lineage2.2.1 | 45 |
| lineage4.3.3 | 6 |
| lineage4.3.2.1 | 1 |
| lineage4.9 | 18 |
| lineage4 | 4 |
| La2 | 1 |
| lineage3.1.1 | 2 |
| lineage4.4.2 | 4 |
| lineage4.3.4.1 | 2 |
| La1.8.1 | 9 |
| lineage4.2.2.2 | 3 |
| lineage2.2.2 | 4 |
| lineage4.2.2 | 1 |
| lineage4.5 | 1 |
| lineage4.8 | 9 |
| lineage3 | 7 |
| lineage4.1.2;lineage3.1 | 2 |
| lineage4.1.1 | 2 |
| La1.7.1 | 3 |
| lineage6.1.1 | 1 |
| lineage4.1.2.1 | 10 |
| lineage2.2.1.1 | 2 |
| lineage2.2 | 2 |
| lineage4.9;lineage3.1.1 | 1 |
| lineage4.6.2.2 | 1 |
| lineage3.1 | 1 |
| 3 | |
| lineage4.2.2.2;lineage3 | 1 |
| lineage4.3.4.2.1 | 1 |
| lineage4.1.1.3.1 | 1 |
| lineage4.8.2 | 2 |
| lineage3.1.2.2 | 2 |
| lineage4.1.2 | 1 |
| lineage4.7 | 1 |
| lineage4.2.1.1 | 1 |
| lineage5.1.1 | 1 |
| lineage4.3.4.2 | 1 |
| lineage4.4.1.2 | 1 |
| lineage6.2.3;lineage1.1.2 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 170 |
Geographic prevalence
Country level data for this variant is available for 2 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR9117732 | Other | lineage1.2.2.2 | None | ERR9786164 | RR-TB | lineage4.1.1.3 | None | ERR9117760 | HR-TB | lineage4.3 | None | ERR9117781 | Other | lineage3.1.3 | None | ERR9117805 | Other | lineage4.3.2 | None | ERR9125467 | Sensitive | lineage2.2.1 | None | SRR10851739 | Sensitive | lineage4.3.3 | None | ERR9992879 | XDR-TB | lineage4.3.3 | None | SRR11972417 | MDR-TB | lineage2.2.1 | None | SRR11349147 | RR-TB | lineage4.3.2.1 | None | SRR1173185 | HR-TB | lineage4.9 | None | SRR1175472 | MDR-TB | lineage4 | None | SRR1175491 | MDR-TB | lineage4 | None | SRR1175474 | HR-TB | lineage4.9 | None | SRR1196478 | MDR-TB | lineage4.9 | None | SRR14165046 | Sensitive | lineage4.3.3 | None | SRR11972425 | Pre-XDR-TB | lineage2.2.1 | None | SRR13888750 | Other | La2 | None | SRR12634609 | MDR-TB | lineage3.1.1 | None | SRR13423546 | Other | lineage4.4.2 | None | SRR18002874 | MDR-TB | lineage2.2.1 | None | SRR15508556 | Other | lineage4.3.4.1 | None | SRR16058682 | Sensitive | lineage2.2.1 | None | SRR1792025 | Other | La1.8.1 | None | SRR15316595 | RR-TB | lineage4.4.2 | None | SRR16058249 | Sensitive | lineage4.2.2.2 | None | SRR1792011 | Other | La1.8.1 | None | SRR1792022 | Other | La1.8.1 | None | SRR18002875 | MDR-TB | lineage2.2.2 | None | SRR18002891 | MDR-TB | lineage2.2.1 | None | SRR18002901 | MDR-TB | lineage2.2.1 | None | SRR18002909 | MDR-TB | lineage2.2.1 | None | SRR18002930 | MDR-TB | lineage2.2.1 | None | SRR18002941 | RR-TB | lineage2.2.1 | None | SRR18002937 | Other | lineage2.2.1 | None | SRR18002935 | Pre-XDR-TB | lineage2.2.1 | None | SRR18002963 | Other | lineage2.2.1 | None | SRR18002945 | RR-TB | lineage2.2.1 | None | SRR18002974 | Pre-XDR-TB | lineage2.2.1 | None | SRR18002967 | Pre-XDR-TB | lineage2.2.1 | None | SRR18002976 | Other | lineage2.2.1 | None | SRR18002981 | Other | lineage2.2.1 | None | SRR18002994 | MDR-TB | lineage4.2.2 | None | SRR18002980 | Other | lineage2.2.1 | None | SRR18002984 | MDR-TB | lineage2.2.2 | None | SRR18002998 | Pre-XDR-TB | lineage2.2.2 | None | SRR18002995 | Other | lineage4.4.2 | None | SRR18003002 | MDR-TB | lineage2.2.1 | None | SRR18003007 | MDR-TB | lineage4.5 | None | SRR18003004 | Pre-XDR-TB | lineage2.2.2 | None | SRR18003013 | Pre-XDR-TB | lineage4.4.2 | None | SRR18003009 | MDR-TB | lineage2.2.1 | None | SRR18003015 | MDR-TB | lineage2.2.1 | None | SRR18003024 | RR-TB | lineage2.2.1 | None | SRR18003012 | Pre-XDR-TB | lineage2.2.1 | None | SRR18003023 | Other | lineage2.2.1 | None | SRR18003030 | Pre-XDR-TB | lineage2.2.1 | None | SRR18003042 | Other | lineage2.2.1 | None | SRR18003032 | Other | lineage2.2.1 | None | SRR18003033 | Other | lineage2.2.1 | None | SRR18003049 | Other | lineage2.2.1 | None | SRR19303815 | Other | lineage4.8 | None | SRR18003046 | MDR-TB | lineage2.2.1 | None | SRR18913779 | Other | lineage3 | None | SRR19303805 | Other | lineage4.8 | None | SRR18003045 | Other | lineage2.2.1 | None | SRR18003047 | MDR-TB | lineage2.2.1 | None | SRR19303899 | Other | lineage3 | None | SRR19303907 | Other | lineage4.8 | None | SRR19303820 | RR-TB | lineage4.8 | None | SRR19304104 | Other | lineage4.8 | None | SRR19303917 | Other | lineage2.2.1 | None | SRR2101625 | Other | lineage4.1.2;lineage3.1 | None | SRR2101730 | Sensitive | lineage4.1.1 | None | SRR21727760 | Other | lineage2.2.1 | None | SRR21239833 | Sensitive | lineage4.3.3 | None | SRR21239974 | Sensitive | lineage4.3.3 | None | SRR21469201 | Other | La1.7.1 | None | SRR21469202 | Other | La1.7.1 | None | SRR21658552 | Other | lineage6.1.1 | None | SRR21686597 | Sensitive | lineage4.1.2.1 | None | SRR21469200 | Other | La1.7.1 | None | SRR22424778 | RR-TB | lineage2.2.1.1 | None | SRR22048375 | Other | lineage4.1.2.1 | None | ERR1665405 | Pre-XDR-TB | lineage2.2.1 | None | SRR3619764 | Pre-XDR-TB | lineage2.2 | None | SRR3618864 | Pre-XDR-TB | lineage2.2.1 | None | SRR3601585 | Pre-XDR-TB | lineage2.2 | None | SRR3619841 | Pre-XDR-TB | lineage2.2.1 | None | ERR171142 | Other | lineage4.9;lineage3.1.1 | None | ERR4816702 | RR-TB | lineage4.6.2.2 | None | ERR2027290 | RR-TB | lineage3.1 | None | ERR1750907 | RR-TB | None | SRR3675265 | Other | lineage4 | None | SRR3675282 | Other | None | SRR3675565 | Other | lineage3 | None | ERR4817204 | RR-TB | lineage4.9 | None | SRR5007172 | Sensitive | lineage4.1.2.1 | None | ERR4817915 | RR-TB | lineage4.9 | None | ERR2513405 | Other | lineage2.2.1 | None | SRR6045553 | RR-TB | lineage4.9 | None | SRR5007204 | Other | lineage4.1.2.1 | None | SRR6045464 | Other | lineage4.1.1.3 | None | SRR6045621 | Other | lineage4.1.1.3 | None | SRR6044838 | Other | lineage4.9 | None | SRR5818694 | RR-TB | lineage4.2.2.2;lineage3 | None | SRR6045843 | Other | lineage4.2.2.2 | None | SRR6046210 | Other | lineage4 | None | SRR5818647 | RR-TB | lineage4.3.4.2.1 | None | SRR6045909 | Other | lineage4.8 | None | SRR6044841 | Other | lineage4.9 | None | SRR6045928 | Other | lineage4.9 | None | SRR6044873 | Other | lineage4.1.1.3.1 | None | SRR6045002 | MDR-TB | lineage4.9 | None | SRR6045944 | Other | lineage4.1.2.1 | None | SRR6045999 | Sensitive | lineage4.8.2 | gb | SRR6045017 | Other | lineage3.1.2.2 | None | SRR6046159 | Other | lineage4.8.2 | None | SRR6045986 | Other | lineage3 | None | SRR6046020 | Other | lineage3 | None | SRR6045384 | Other | lineage4.1.2 | None | SRR6045178 | Other | lineage3 | None | SRR6046484 | Other | lineage1.2.2.2 | None | ERR2851354 | RR-TB | lineage4.9 | None | SRR6046440 | Other | lineage3.1.2.2 | None | SRR6046275 | Other | lineage3.1.1 | None | SRR6046359 | Other | lineage4.7 | None | SRR6046343 | Other | lineage2.2.1 | None | SRR6046442 | Other | lineage3 | None | SRR6982141 | RR-TB | lineage4.3.3 | None | SRR6046482 | HR-TB | None | ERR4872322 | Pre-XDR-TB | lineage2.2.1 | None | SRR6982064 | Sensitive | lineage4.1.1 | None | SRR6982389 | Other | lineage4.1.2;lineage3.1 | None | SRR6785281 | Other | lineage4.2.1.1 | None | SRR7131031 | Other | lineage4.2.2.2 | None | ERR2984800 | Pre-XDR-TB | lineage4.3.4.1 | None | ERR5087846 | Other | La1.8.1 | None | ERR5087596 | Other | La1.8.1 | None | ERR502517 | MDR-TB | lineage5.1.1 | None | ERR5311077 | RR-TB | La1.8.1 | None | SRR7131075 | Other | lineage4.8 | None | SRR7131147 | Other | lineage4.1.2.1 | None | SRR7131123 | Other | lineage4.8 | None | SRR7131145 | Other | lineage4.1.2.1 | None | SRR9971333 | MDR-TB | lineage4.1.1.3 | None | SRR7131182 | Other | lineage4.1.2.1 | None | SRR7131195 | Other | lineage2.2.1 | None | SRR7131216 | Other | lineage4.1.2.1 | None | SRR7131229 | Other | lineage4.1.2.1 | None | SRR7131287 | Other | lineage2.2.1.1 | None | ERR1034647 | MDR-TB | lineage4.1.1.3 | None | DRR184982 | RR-TB | lineage2.2.1 | None | ERR10219876 | Other | lineage4.3.4.2 | None | SRR9971080 | RR-TB | lineage2.2.1 | None | SRR9971122 | MDR-TB | lineage4.8 | None | ERR3439265 | Other | lineage4.9 | None | ERR126597 | MDR-TB | lineage4.4.1.2 | None | ERR3324368 | RR-TB | lineage6.2.3;lineage1.1.2 | None | ERR4769553 | RR-TB | lineage4.9 | None | ERR3468488 | RR-TB | La1.8.1 | None | ERR3468613 | RR-TB | La1.8.1 | None | ERR4769433 | Pre-XDR-TB | lineage4.9 | None | ERR3439489 | RR-TB | La1.8.1 | None | ERR3468561 | HR-TB | lineage4.9 | None | ERR4187652 | Other | lineage4.9 | None | ERR6197024 | RR-TB | lineage4.9 | None | ERR4800297 | Other | lineage4.1.1.3 | in | ERR5917985 | MDR-TB | lineage2.2.1 | None | ERR6359073 | Sensitive | lineage4.9 | None |
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