EBG00000313339 - n.1066G>A


Drug resistance types
5 Sensitive 14 RR-TB 4 HR-TB 17 MDR-TB 14 Pre-XDR-TB 1 XDR-TB 43 Other
lineage Counts
lineage Count
lineage2.2.1 31
lineage4.2.2.2 2
lineage2.2.1;lineage4.9 1
lineage4.1.1.3 2
lineage4.3.3 7
La1.7.1 2
lineage4.9 5
lineage3.1.2.1;lineage4.9 1
lineage1.2.2.2 1
lineage3 3
lineage4.1.2.1 4
La1.8.1 6
lineage3.1.1 1
lineage4.4.2 4
lineage4.8 4
lineage2.2.1.1 2
lineage4.1.1.1 1
lineage4.3.2.1 1
lineage2.2.1;lineage4 1
lineage4 2
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 1
lineage4.1.3 1
lineage4.3.4.2.1 1
lineage4.2.2 1
La2 1
lineage4.4.1.1 1
lineage1.1.2;lineage6.2.3 1
lineage2.2.2 3
lineage4.3.4.2 2
lineage4.8.1 1
lineage4.5 1
lineage4.3.4.1 1
lineage4.4.1.2 1
lineage4.2.1.1 1
spoligotype Counts
spoligotype Count
None 98
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR4872322 Pre-XDR-TB lineage2.2.1 None
SRR3601585 Pre-XDR-TB lineage2.2.1 None
SRR16058249 Sensitive lineage4.2.2.2 None
SRR12708406 HR-TB lineage2.2.1;lineage4.9 None
ERR9786164 RR-TB lineage4.1.1.3 None
SRR6982141 Other lineage4.3.3 None
SRR21469200 Other La1.7.1 None
SRR7069835 Other lineage2.2.1 None
SRR3675582 Other lineage4.9 None
ERR2027290 Other lineage3.1.2.1;lineage4.9 None
SRR6046484 Other lineage1.2.2.2 None
ERR867555 Other lineage3 None
SRR9971333 MDR-TB lineage4.1.1.3 None
SRR5007204 Other lineage4.1.2.1 None
SRR18002930 MDR-TB lineage2.2.1 None
SRR18003012 Pre-XDR-TB lineage2.2.1 None
ERR5311077 Other La1.8.1 None
SRR11342640 MDR-TB lineage4.3.3 None
SRR3618864 Pre-XDR-TB lineage2.2.1 None
SRR12634609 MDR-TB lineage3.1.1 None
SRR18002935 Pre-XDR-TB lineage2.2.1 None
SRR13423546 Other lineage4.4.2 None
SRR19303820 RR-TB lineage4.8 None
SRR18003023 Other lineage2.2.1 None
SRR12062533 Pre-XDR-TB lineage2.2.1.1 None
SRR18002980 Other lineage2.2.1 None
SRR18003032 Other lineage2.2.1 None
SRR8758877 MDR-TB lineage4.1.1.1 None
SRR11349147 RR-TB lineage4.3.2.1 None
SRR21469202 Other La1.7.1 None
SRR1792011 Other La1.8.1 None
SRR1792022 Other La1.8.1 None
SRR11342649 MDR-TB lineage4.3.3 None
SRR18002891 MDR-TB lineage2.2.1 None
ERR867568 Other lineage2.2.1;lineage4 None
SRR18003046 MDR-TB lineage2.2.1 None
SRR18002974 Other lineage2.2.1 None
SRR3675565 Other lineage4 None
ERR5162090 RR-TB lineage4.9 None
SRR15316595 RR-TB lineage4.4.2 None
SRR11972425 Pre-XDR-TB lineage2.2.1 None
SRR21239833 Sensitive lineage4.3.3 None
SRR21727760 Other lineage2.2.1 None
SRR18003047 MDR-TB lineage2.2.1 None
SRR6046482 Other La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 None
SRR11342671 RR-TB lineage4.1.3 None
SRR5818647 Other lineage4.3.4.2.1 None
SRR18002994 MDR-TB lineage4.2.2 None
SRR13888750 Other La2 None
SRR18002874 MDR-TB lineage2.2.1 None
ERR867570 RR-TB lineage4.9 None
DRR184982 Other lineage2.2.1 None
SRR11342698 RR-TB lineage4.4.1.1 None
SRR18002967 HR-TB lineage2.2.1 None
SRR19303815 Other lineage4.8 None
ERR3324368 RR-TB lineage1.1.2;lineage6.2.3 None
SRR3619841 Pre-XDR-TB lineage2.2.1 None
SRR18003045 Other lineage2.2.1 None
SRR9971122 MDR-TB lineage4.8 None
SRR21686597 Sensitive lineage4.1.2.1 None
SRR18002998 Pre-XDR-TB lineage2.2.2 None
ERR867569 Other lineage4.9 None
SRR18003002 MDR-TB lineage2.2.1 None
SRR11342673 RR-TB lineage4.3.4.2 None
SRR12062493 Pre-XDR-TB lineage4.4.2 None
SRR3619764 Pre-XDR-TB lineage2.2.1 None
ERR10219876 Other lineage4.3.4.2 None
SRR10851739 Sensitive lineage4.3.3 None
ERR3439489 RR-TB La1.8.1 None
SRR6045909 Other lineage4.8.1 None
SRR18002984 MDR-TB lineage2.2.2 None
SRR18002963 Other lineage2.2.1 None
SRR22424778 RR-TB lineage2.2.1.1 None
SRR18003013 Pre-XDR-TB lineage4.4.2 None
SRR18003009 MDR-TB lineage2.2.1 None
SRR18002981 Other lineage2.2.1 None
SRR18003007 MDR-TB lineage4.5 None
SRR11972417 MDR-TB lineage2.2.1 None
SRR1792025 Other La1.8.1 None
SRR11342646 HR-TB lineage3 None
SRR15508556 Other lineage4.3.4.1 None
ERR3468488 Other La1.8.1 None
ERR867538 Other lineage4.2.2.2 None
ERR126597 HR-TB lineage4.4.1.2 None
SRR7131145 Other lineage4.1.2.1 None
SRR18003024 RR-TB lineage2.2.1 None
SRR18003042 Other lineage2.2.1 None
SRR3675389 Other lineage4.9 None
ERR9992879 XDR-TB lineage4.3.3 None
SRR6785281 Other lineage4.2.1.1 None
SRR18003030 Pre-XDR-TB lineage2.2.1 None
SRR19303899 Other lineage3 None
SRR21239974 Sensitive lineage4.3.3 None
SRR18002941 RR-TB lineage2.2.1 None
SRR18003004 Pre-XDR-TB lineage2.2.2 None
SRR3675265 Other lineage4 None
SRR7131147 Other lineage4.1.2.1 None
SRR11342669 Other lineage4.8 None