EBG00000313325 - n.577T>C


Drug resistance types
82 Sensitive 36 RR-TB 34 HR-TB 42 MDR-TB 19 Pre-XDR-TB 1 XDR-TB 124 Other
lineage Counts
lineage Count
lineage4.8 18
lineage4.6.5 2
lineage4.9 146
lineage4.4.1.1 4
lineage6.1.3 2
lineage4.3.4.2 2
lineage3 9
lineage4.9;lineage7 2
lineage2.2.1 36
lineage4.1.2.1 5
lineage4.6.1.2 8
lineage4.1.1.1 3
lineage4.4 1
lineage2.2.1.1 2
lineage1.1.2 2
lineage4.4.2 2
lineage4.1.1.3 5
lineage4 3
lineage4.5 2
lineage2.2.1;lineage4.5 1
lineage4.2.1 4
lineage3.1.2.1 3
lineage3;lineage4 2
lineage3.1.1;lineage4.9 1
La1.3 4
lineage2;lineage4.9 1
lineage4.3.2.1 2
lineage4.4.1.1.1 4
La1.8.1 6
lineage4.2.2.2 2
lineage5.1.1 2
lineage4.7 3
lineage3.1.2 1
1
lineage4.8.1 4
lineage1.2.1.1 1
lineage4.3.4.1 3
lineage2.2.2 4
lineage4.6.2.2 1
lineage4.3.3 5
lineage1.1.1 1
lineage2.1;lineage4.9 1
lineage4.3.3;lineage4.8 2
lineage4.3.4.2.1 2
lineage4.1.2 2
lineage2.2.1;lineage4.9 2
lineage4.9.1 1
lineage4.2.1.1;lineage4.3.3 1
lineage2.1;lineage4.9;lineage7 1
lineage2.2.1;lineage4 2
lineage4.1.2;lineage4.9 1
lineage4.6.1.1 1
lineage6.1.2 1
lineage4.1.3 1
lineage4.2.2 1
lineage4.3;lineage4.9 1
La2 1
lineage3.1.2.1;lineage4.9 1
lineage1.2.2.2 1
La1;lineage4.9 1
La1.2.BCG;lineage4.9 1
lineage4.4.1.2 1
lineage1.1.1.1 1
lineage2;lineage4 1
spoligotype Counts
spoligotype Count
None 338
Geographic prevalence
Country level data for this variant is available for 2 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR10796599 Other lineage4.8 None
ERR7801175 HR-TB lineage4.6.5 None
SRR6045832 Other lineage4.9 None
SRR1049623 MDR-TB lineage4.4.1.1 None
SRR1181402 Sensitive lineage4.9 None
SAMEA3501073 RR-TB lineage4.8 None
SRR3675552 Other lineage4.9 None
ERR3806588 Other lineage6.1.3 None
ERR10796633 Other lineage4.3.4.2 None
ERR4596902 MDR-TB lineage3 None
SRR3675231 MDR-TB lineage4.9;lineage7 None
ERR867575 Other lineage4.9 None
SRR21727760 Other lineage2.2.1 None
ERR6866125 Sensitive lineage4.1.2.1 None
SRR1184021 Sensitive lineage4.9 None
SAMN02381051 RR-TB lineage4.6.1.2 None
ERR10796620 Other lineage4.1.1.1 None
ERR867574 Other lineage4.9 None
ERR3275709 HR-TB lineage3 nl
ERR4818536 Other lineage4.9 None
ERR4769439 HR-TB lineage4.9 None
SRR10315751 MDR-TB lineage4.8 None
SRR16627752 RR-TB lineage4.4 None
ERR1063855 Other lineage4.9 None
SRR22424778 RR-TB lineage2.2.1.1 None
SRR5341310 Other lineage1.1.2 None
SRR20969542 Other lineage4.4.2 None
ERR970449 RR-TB lineage4.1.1.3 None
SRR1049674 HR-TB lineage2.2.1 None
SRR1181349 Sensitive lineage4 None
ERR4816548 HR-TB lineage4.5 None
SRR5818426 Other lineage4.9 None
SRR1181283 Sensitive lineage4.9 None
SRR1049751 RR-TB lineage4.6.1.2 None
SRR7645901 MDR-TB lineage2.2.1 None
ERR1140766 Sensitive lineage1.1.2 None
SRR1175052 HR-TB lineage4.9 None
ERR10796591 Other lineage4.9 None
SRR6855695 Sensitive lineage4.8 None
SRR7496471 Sensitive lineage4 None
ERR4811035 Pre-XDR-TB lineage2.2.1;lineage4.5 None
SRR7755649 MDR-TB lineage4.2.1 None
SRR7645906 Other lineage2.2.1 None
SRR7070195 Sensitive lineage3.1.2.1 None
SRR1173740 Other lineage3;lineage4 None
ERR171142 Other lineage3.1.1;lineage4.9 None
SRR1181214 Other lineage4.9 None
ERR867541 MDR-TB lineage4.2.1 None
SRR1180319 Sensitive lineage4.9 None
SRR12708413 HR-TB lineage4.1.1.3 None
ERR4769436 Other La1.3 None
SRR1180946 Sensitive lineage2;lineage4.9 None
SRR1180977 Sensitive lineage4.9 None
SRR1175513 Sensitive lineage4.9 None
SRR5818456 Other lineage4.9 None
ERR323037 Other lineage4.9 None
DRR184982 Other lineage2.2.1 None
SRR11342698 RR-TB lineage4.4.1.1 None
ERR978767 RR-TB lineage4.8 None
ERR4769552 Sensitive La1.3 None
SRR12708396 MDR-TB lineage4.3.2.1 None
ERR736831 Other lineage4.9 None
SRR9971112 HR-TB lineage2.2.1 None
SRR5818437 RR-TB lineage4.9 None
ERR867540 MDR-TB lineage2.2.1 None
ERR978766 RR-TB lineage4.8 None
SRR3618864 Pre-XDR-TB lineage2.2.1 None
SRR10315556 Sensitive lineage2.2.1 None
SRR1173281 Other lineage3 None
SRR5818458 Other lineage4.9 None
SRR11342696 MDR-TB lineage4.4.1.1.1 None
SRR8073606 Other La1.8.1 None
SRR1180444 Sensitive lineage4.9 None
ERR867538 Other lineage4.2.2.2 None
ERR10796636 Other lineage4.1.2.1 None
SRR5818385 Other lineage4.9 None
SRR5818427 HR-TB lineage4.9 None
SRR3619841 Pre-XDR-TB lineage2.2.1 None
ERR751338 Other lineage5.1.1 None
SRR1175512 Sensitive lineage4.9 None
SRR5818459 Other lineage4.9 None
SRR1180399 Sensitive lineage4.9 None
SRR12708392 Other lineage2.2.1 None
SRR6152979 Other lineage4.7 None
SRR11342647 MDR-TB lineage4.1.1.3 None
ERR502470 RR-TB lineage4.9 None
ERR867571 Other lineage4.9 None
SRR1180446 Other lineage4.9 None
ERR867525 Pre-XDR-TB lineage2.2.1 None
SRR11342644 MDR-TB lineage4.4.1.1.1 None
SRR1180410 Sensitive lineage4.9 None
SRR5818452 Other lineage4.9 None
ERR473334 HR-TB lineage4.9 None
ERR2027250 Other lineage3.1.2 None
ERR867569 Other lineage4.9 None
SRR6045359 HR-TB lineage4.9 None
ERR2515230 Sensitive lineage4.8 None
ERR4796577 HR-TB None
SRR1792022 Other La1.8.1 None
SRR5818470 Other lineage4.9 None
SRR11342662 MDR-TB lineage4.8.1 None
SRR5341429 HR-TB lineage3.1.2.1 None
ERR2027209 MDR-TB lineage1.2.1.1 None
SRR5818388 Other lineage4.9 None
SRR1175472 RR-TB lineage4.3.4.1 None
SRR20632814 Sensitive lineage4.9 None
SRR11342673 RR-TB lineage4.3.4.2 None
SRR1180345 Other lineage4.9 None
SRR1181215 Sensitive lineage4.4.1.1.1 None
ERR867527 Pre-XDR-TB lineage2.2.1 None
SRR1180440 Other lineage4.9 None
SRR11349145 Pre-XDR-TB lineage4.4.1.1.1 None
ERR4769408 Other La1.3 None
SRR18003004 Pre-XDR-TB lineage2.2.2 None
SRR5818446 Other lineage4.9 None
ERR9786528 Sensitive lineage4.6.2.2 None
SRR5818429 Sensitive lineage4.9 None
ERR10796564 Other lineage4.3.3 None
SRR16156804 Sensitive lineage4.9 None
ERR3283046 Sensitive lineage4.9 None
SRR11342687 RR-TB lineage4.2.2.2 None
SRR18911231 Sensitive lineage4.1.1.3 None
ERR4819314 HR-TB lineage1.1.1 None
ERR2027257 Other lineage4.1.2.1 None
SRR1181161 Other lineage4.9 None
ERR216965 Sensitive lineage4.9 None
ERR867573 Other lineage4.9 None
SRR5818399 Sensitive lineage4.9 None
SRR3675495 RR-TB lineage2.1;lineage4.9 None
SRR11342651 MDR-TB lineage4.1.1.1 None
SRR1181351 Sensitive lineage4.9 None
ERR2229198 Sensitive lineage4.8 None
ERR4798823 HR-TB lineage4 None
SRR1180312 Sensitive lineage4.9 None
SRR1062920 MDR-TB lineage4.3.3;lineage4.8 None
SRR11342660 MDR-TB lineage2.2.1 None
ERR867554 Other lineage4.3.4.1 None
SRR11342636 MDR-TB lineage4.3.3 None
ERR6359066 HR-TB lineage4.9 None
SRR10315567 HR-TB lineage2.2.1 None
SRR5818413 Sensitive lineage4.9 None
ERR867572 Other lineage4.9 None
ERR867570 RR-TB lineage4.9 None
ERR036225 Other lineage4.3.4.2.1 None
SRR5818404 Other lineage4.9 None
SRR5818448 Other lineage4.9 None
SRR1183054 Sensitive lineage4.9 None
SRR5818398 Other lineage4.9 None
SRR11342664 MDR-TB lineage2.2.2 None
SRR1184308 RR-TB lineage4.9 None
SRR1172717 Sensitive lineage4.9 None
ERR4818646 Sensitive lineage4.1.2.1 None
ERR037234 Sensitive lineage4.9 None
ERR978767_ERR978765_ERR978766 RR-TB lineage4.8 None
ERR3468488 Other La1.8.1 None
ERR2851356 Sensitive lineage4.9 None
ERR4769444 HR-TB lineage4.9 None
SRR5818396 Other lineage4.9 None
SRR18913750 Other lineage2.2.1 None
SRR5818425 Other lineage4.9 None
ERR2886463 Sensitive lineage2.2.1 None
SRR5818408 Other lineage4.9 None
SRR9971065 RR-TB lineage2.2.1 None
ERR10796598 Other lineage4.9 None
SRR1180391 Sensitive lineage4.9 None
SRR11342658 RR-TB lineage4.1.2 None
SRR1184114 Sensitive lineage2.2.1;lineage4.9 None
SRR1184329 Other lineage4.9 None
ERR2432997 Other lineage4.8 None
SRR5818409 Other lineage4.9 None
SRR1062880 MDR-TB lineage4.6.1.2 None
ERR037504 Other lineage4.9.1 None
ERR323044 HR-TB lineage4.3.4.2.1 None
SRR6045191 Sensitive lineage4.9 None
SRR1173185 Other lineage4.9 None
ERR473323 HR-TB lineage4.9 None
ERR4817915 Other lineage4.9 None
SRR1238558 Other lineage4.9 None
SRR1181390 Sensitive lineage2.2.1;lineage4.9 None
SRR1196478 Other lineage4.9 None
ERR5987263 MDR-TB lineage2.2.1 None
ERR473303 Sensitive lineage4.9 None
SRR1175506 Sensitive lineage4.9 None
SRR1792011 Other La1.8.1 None
ERR4815815 Sensitive lineage4.9 None
ERR9992784 XDR-TB lineage2.2.2 None
SRR5818445 Other lineage4.9 None
SRR5818397 Other lineage4.9 None
SRR22424765 HR-TB lineage4.8 None
SRR5818428 Sensitive lineage4.9 None
SRR1180406 Sensitive lineage4.9 None
SRR1049675 HR-TB lineage2.2.1 None
ERR6359074 HR-TB lineage4.9 None
SRR9971114 Other lineage2.2.1 None
SRR1180300 Sensitive lineage4.9 None
ERR867542 HR-TB lineage4.2.1.1;lineage4.3.3 None
SRR3675555 MDR-TB lineage2.1;lineage4.9;lineage7 None
ERR867566 Other lineage4.9 None
SRR11342649 MDR-TB lineage4.3.3 None
SRR6046385 Sensitive lineage4.9 None
SRR5818395 Sensitive lineage4.9 None
SAMN02381009 MDR-TB lineage4.4.1.1 None
SRR7444074 Sensitive lineage4.9 None
SRR26159065 Other lineage4.9 None
SRR5818422 Other lineage4.9 None
ERR867568 Other lineage2.2.1;lineage4 None
SRR3675539 MDR-TB lineage4.9;lineage7 None
SRR6045664 Other lineage4.2.1 None
ERR6359070 Sensitive lineage4.9 None
SRR6982246 RR-TB lineage4.1.2;lineage4.9 None
SRR1180375 Sensitive lineage4.9 None
SRR1180420 Sensitive lineage4.9 None
ERR9786076 Other lineage3 None
SRR13180204 Other lineage3 None
SRR11972425 Pre-XDR-TB lineage2.2.1 None
SRR6982239 Sensitive lineage4.1.1.3 None
ERR4817667 HR-TB lineage4.8 None
SAMN02381005 Sensitive lineage4.6.1.1 None
ERR7801176 RR-TB lineage4.6.5 None
SRR6046141 Other lineage4.9 None
SRR18909918 Other lineage2.2.1.1 None
ERR2513259 Other lineage3 None
SRR5818469 Other lineage4.9 None
ERR473279 Other lineage4.9 None
ERR387051 RR-TB lineage4.9 None
ERR176741 Other lineage4.9 None
SRR5818435 Sensitive lineage4.9 None
ERR9787033 Sensitive lineage6.1.2 None
SRR11342642 MDR-TB lineage4.1.1.1 None
ERR867524 Pre-XDR-TB lineage4.2.1 None
SRR18003047 MDR-TB lineage2.2.1 None
SRR3601585 Pre-XDR-TB lineage2.2.1 None
ERR067712 Sensitive lineage4.9 None
SRR5818449 MDR-TB lineage4.9 None
SRR11342682 Other lineage4.1.2 None
SRR7755645 Pre-XDR-TB lineage2.2.1 None
SRR3675230 Other lineage3;lineage4 None
SRR9971150 RR-TB lineage4.8.1 None
SRR11342671 RR-TB lineage4.1.3 None
SRR5818453 Sensitive lineage4.9 None
DRR188816 Other lineage4.2.2 None
SRR1175487 Sensitive lineage4.9 None
ERR4816762 Sensitive lineage4.9 None
ERR10796571 Other lineage4.9 None
ERR736837 Pre-XDR-TB lineage4.9 None
SRR11342668 Pre-XDR-TB lineage4.8.1 None
SRR7069800 Other lineage3.1.2.1 None
SRR5818423 RR-TB lineage4.9 None
SRR11342686 MDR-TB lineage4.8 None
ERR4769514 Other La1.3 None
SRR1181237 Sensitive lineage2.2.1;lineage4 None
SRR5818436 Sensitive lineage4.9 None
ERR978765 RR-TB lineage4.8 None
ERR036207 Other lineage4.3;lineage4.9 None
SRR12708414 HR-TB lineage2.2.1 None
SRR7236374 Other La1.8.1 None
SRR5818386 Other lineage4.9 None
ERR867526 MDR-TB lineage2.2.1 None
SRR13888750 Other La2 None
SRR22424787 Sensitive lineage4.9 None
SRR6982141 Other lineage4.3.3 None
SRR5818410 Sensitive lineage4.9 None
SAMN02380990 MDR-TB lineage4.6.1.2 None
ERR4816470 HR-TB lineage3 None
ERR9119733 MDR-TB lineage2.2.1 None
SRR1049677 MDR-TB lineage4.3.3;lineage4.8 None
ERR751330 MDR-TB lineage5.1.1 None
SRR12708370 Pre-XDR-TB lineage2.2.2 None
SRR7645928 Other lineage4.7 None
SRR3675582 Other lineage4.9 None
SRR9970981 RR-TB lineage4.3.2.1 None
ERR2027290 Other lineage3.1.2.1;lineage4.9 None
SRR12708411 HR-TB lineage1.2.2.2 None
SRR9971270 RR-TB lineage2.2.1 None
ERR4769550 Sensitive La1;lineage4.9 None
SRR5818432 MDR-TB lineage4.9 None
SRR1172807 Sensitive lineage4.9 None
ERR9896153 RR-TB lineage4.4.1.1 None
SRR7645899 Other lineage2.2.1 None
ERR867523 Pre-XDR-TB lineage2.2.1 None
SRR1175474 Other lineage4.9 None
SRR11342693 MDR-TB lineage4.8.1 None
ERR4814639 HR-TB lineage4.9 None
ERR485006 HR-TB lineage4.9 None
SRR5818421 Sensitive lineage4.9 None
SRR1181325 Sensitive lineage4.9 None
SRR1180355 Sensitive lineage4.9 None
SRR5818389 Other lineage4.9 None
SRR5818460 Other lineage4.9 None
SRR5818411 RR-TB lineage4.9 None
ERR867544 Other lineage4.9 None
SRR6046376 Other lineage3 None
SRR1180250 Other lineage4.9 None
SRR1172885 HR-TB lineage4.9 None
SRR8651633 Pre-XDR-TB lineage4.4.2 None
ERR4596910 Sensitive lineage4.9 None
ERR6358951 Sensitive lineage4.9 None
ERR867567 RR-TB lineage3 None
ERR4819462 Sensitive lineage4.9 None
ERR6359069 HR-TB lineage4.9 None
SRR1173719 Other lineage4.9 None
ERR560440 Sensitive La1.2.BCG;lineage4.9 None
ERR126597 HR-TB lineage4.4.1.2 None
DRR185000 Other lineage1.1.1.1 None
SRR21677886 Sensitive lineage4.9 None
ERR10796589 Other lineage4.9 None
SRR21713567 Other lineage4.5 None
ERR4820484 Sensitive lineage4.8 None
SRR1791940 Other La1.8.1 None
ERR736850 Sensitive lineage4.9 None
SRR1140712 MDR-TB lineage4.6.1.2 None
SRR1180413 Sensitive lineage4.9 None
ERR036194 Other lineage4.6.1.2 None
ERR1023502 MDR-TB lineage2;lineage4 None
ERR036215 Other lineage4.8 None
SRR1175491 MDR-TB lineage4.3.4.1 None
SRR12708419 Other lineage4.3.3 None
SRR18002947 MDR-TB lineage2.2.1 None
SRR7496523 Other lineage4.7 None
ERR4769442 Sensitive lineage4.9 None
ERR867522 Pre-XDR-TB lineage2.2.1 None
ERR108125 RR-TB lineage4.9 None
SRR1049752 RR-TB lineage4.6.1.2 None
SRR5818414 Other lineage4.9 None
SRR1181403 Other lineage4.9 None
ERR4769417 Pre-XDR-TB lineage4.9 None
SRR12708418 HR-TB lineage2.2.1 None
ERR10796635 Other lineage4.8 None
ERR4819357 Sensitive lineage4.9 None
ERR9787336 RR-TB lineage6.1.3 None
SRR3619764 Pre-XDR-TB lineage2.2.1 None
SRR5818462 Other lineage4.9 None
SRR1181256 Other lineage4.9 None
SRR1049582 MDR-TB lineage4.6.1.2 None
ERR3797065 RR-TB lineage4.9 None
SRR2024953 MDR-TB lineage2.2.1 cn
SRR11342669 Other lineage4.8 None
SRR7755655 Other lineage4.1.2.1 None