EBG00000313325 - n.448C>A
Drug resistance types
12 Sensitive
27 RR-TB
3 HR-TB
18 MDR-TB
11 Pre-XDR-TB
0 XDR-TB
50 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9 | 45 |
| lineage2.2.1 | 24 |
| La1.7.1 | 1 |
| lineage1.1.3.3 | 1 |
| lineage4.3.3 | 3 |
| lineage4.8 | 8 |
| lineage4.1.1.3 | 2 |
| lineage2.2.1.1 | 2 |
| lineage4.1.1.1 | 1 |
| lineage4.1.2.1 | 2 |
| lineage2.2;lineage4 | 1 |
| lineage3.1.1 | 2 |
| La2 | 1 |
| lineage1.1.1.1 | 1 |
| lineage4.4.1.1.1 | 1 |
| lineage4.1.2;lineage4.9 | 1 |
| lineage1.1.2;lineage6.2.3 | 1 |
| lineage3 | 2 |
| lineage2.2.2 | 3 |
| 1 | |
| lineage4.2.1 | 2 |
| La1.6 | 1 |
| lineage4.8.1 | 3 |
| lineage4.1.2 | 1 |
| La1.8.1 | 2 |
| lineage4.3 | 1 |
| lineage4.4 | 1 |
| lineage4.3.2.1 | 1 |
| lineage3.1.2.1;lineage4.9 | 1 |
| La1.3 | 1 |
| lineage4.4.2 | 1 |
| lineage4.3.4.2 | 1 |
| lineage4.2.2.2 | 2 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 121 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR5818445 | Other | lineage4.9 | None | SRR5818436 | Sensitive | lineage4.9 | None | SRR11972417 | MDR-TB | lineage2.2.1 | None | SRR21469201 | Other | La1.7.1 | None | ERR4798769 | Other | lineage1.1.3.3 | None | SRR10315567 | HR-TB | lineage2.2.1 | None | SRR11342636 | MDR-TB | lineage4.3.3 | None | DRR184629 | Other | lineage2.2.1 | None | SRR5818397 | Other | lineage4.9 | None | SRR5818437 | RR-TB | lineage4.9 | None | ERR978766 | RR-TB | lineage4.8 | None | ERR978767_ERR978765_ERR978766 | RR-TB | lineage4.8 | None | ERR3797062 | RR-TB | lineage4.9 | None | ERR867522 | Pre-XDR-TB | lineage2.2.1 | None | SRR16156697 | RR-TB | lineage2.2.1 | None | SRR5818398 | Other | lineage4.9 | None | SRR5818409 | Other | lineage4.9 | None | ERR3283006 | RR-TB | lineage4.9 | None | SRR5818440 | Other | lineage4.9 | None | SRR9971333 | MDR-TB | lineage4.1.1.3 | None | ERR10796597 | Other | lineage4.3.3 | None | SRR22424778 | RR-TB | lineage2.2.1.1 | None | ERR867527 | Pre-XDR-TB | lineage2.2.1 | None | ERR978765 | RR-TB | lineage4.8 | None | SRR10315558 | Sensitive | lineage2.2.1 | None | SRR5818446 | Other | lineage4.9 | None | SAMEA3501073 | RR-TB | lineage4.8 | None | DRR184982 | Other | lineage2.2.1 | None | SRR3618864 | Pre-XDR-TB | lineage2.2.1 | None | SRR5818435 | Sensitive | lineage4.9 | None | ERR867569 | Other | lineage4.9 | None | SRR11342642 | MDR-TB | lineage4.1.1.1 | None | ERR2027257 | Other | lineage4.1.2.1 | None | SRR16156832 | RR-TB | lineage2.2;lineage4 | None | SRR10869071 | MDR-TB | lineage2.2.1 | None | SRR3601585 | Pre-XDR-TB | lineage2.2.1 | None | ERR4596904 | MDR-TB | lineage3.1.1 | None | SRR5818426 | Other | lineage4.9 | None | SRR13888750 | Other | La2 | None | SRR5818413 | Sensitive | lineage4.9 | None | SRR16157123 | Other | lineage4.9 | None | SRR7131145 | Other | lineage4.1.2.1 | None | SRR5818429 | Sensitive | lineage4.9 | None | DRR185000 | Other | lineage1.1.1.1 | None | ERR9285979 | RR-TB | lineage3.1.1 | None | SRR11342644 | MDR-TB | lineage4.4.1.1.1 | None | SRR3619841 | Pre-XDR-TB | lineage2.2.1 | None | SRR9971113 | Other | lineage2.2.1 | None | ERR867571 | Other | lineage4.9 | None | SRR9971112 | Other | lineage2.2.1 | None | SRR6982246 | Sensitive | lineage4.1.2;lineage4.9 | None | SRR7131195 | Other | lineage2.2.1 | None | ERR3324368 | RR-TB | lineage1.1.2;lineage6.2.3 | None | ERR5979454 | Pre-XDR-TB | lineage3 | None | SRR5818452 | Other | lineage4.9 | None | SRR11342664 | MDR-TB | lineage2.2.2 | None | SRR5818469 | Other | lineage4.9 | None | ERR4817069 | RR-TB | None | SRR9971122 | MDR-TB | lineage4.8 | None | SRR5818424 | Sensitive | lineage4.9 | None | SRR5818388 | Other | lineage4.9 | None | SRR5818428 | Sensitive | lineage4.9 | None | ERR867570 | RR-TB | lineage4.9 | None | SRR5818411 | RR-TB | lineage4.9 | None | SRR14782539 | MDR-TB | lineage4.2.1 | None | SRR9971114 | Other | lineage2.2.1 | None | SRR10993951 | RR-TB | La1.6 | None | SRR5818414 | Other | lineage4.9 | None | SRR11342668 | Pre-XDR-TB | lineage4.8.1 | None | SRR19303820 | RR-TB | lineage4.8 | None | ERR4769554 | RR-TB | lineage4.9 | None | SRR11972425 | Pre-XDR-TB | lineage2.2.1 | None | SRR22175249 | Pre-XDR-TB | lineage2.2.1 | None | SRR9970980 | HR-TB | lineage4.1.2 | None | SRR7617847 | Other | La1.8.1 | None | ERR3275941 | RR-TB | lineage4.3 | nl | SRR5818460 | Other | lineage4.9 | None | SRR16627752 | RR-TB | lineage4.4 | None | SRR5818386 | Other | lineage4.9 | None | SRR16156188 | Sensitive | lineage4.9 | None | SRR9970981 | RR-TB | lineage4.3.2.1 | None | ERR2027290 | Other | lineage3.1.2.1;lineage4.9 | None | ERR867572 | Other | lineage4.9 | None | SRR5818449 | MDR-TB | lineage4.9 | None | SRR5818462 | Other | lineage4.9 | None | ERR867541 | MDR-TB | lineage4.2.1 | None | ERR4769436 | Other | La1.3 | None | ERR978767 | RR-TB | lineage4.8 | None | DRR185024 | Other | lineage2.2.2 | None | SRR7236330 | Other | La1.8.1 | None | SRR5818425 | Other | lineage4.9 | None | ERR4819863 | RR-TB | lineage4.9 | None | ERR4811101 | Other | lineage4.4.2 | None | SRR11342693 | MDR-TB | lineage4.8.1 | None | SRR18002887 | MDR-TB | lineage2.2.1.1 | None | SRR18002981 | Other | lineage2.2.1 | None | SRR5818389 | Other | lineage4.9 | None | SRR5818422 | Other | lineage4.9 | None | SRR5818423 | RR-TB | lineage4.9 | None | SRR11342662 | MDR-TB | lineage4.8.1 | None | ERR4808964 | RR-TB | lineage2.2.1 | None | SRR5818395 | Sensitive | lineage4.9 | None | ERR10219876 | Other | lineage4.3.4.2 | None | SRR11342649 | MDR-TB | lineage4.3.3 | None | ERR4809333 | Pre-XDR-TB | lineage2.2.2 | None | SRR3619764 | Pre-XDR-TB | lineage2.2.1 | None | SRR21727760 | Other | lineage2.2.1 | None | SRR5818393 | Other | lineage4.9 | None | SRR18002974 | Other | lineage2.2.1 | None | SRR22424765 | HR-TB | lineage4.8 | None | SRR6982239 | Sensitive | lineage4.1.1.3 | None | SRR11342687 | RR-TB | lineage4.2.2.2 | None | SRR5818432 | MDR-TB | lineage4.9 | None | SRR5818456 | Other | lineage4.9 | None | ERR867538 | Other | lineage4.2.2.2 | None | SRR5818385 | Other | lineage4.9 | None | SRR5818457 | Other | lineage4.9 | None | SRR16156775 | Other | lineage4.9 | None | ERR867567 | RR-TB | lineage3 | None | SRR11342691 | MDR-TB | lineage2.2.1 | None | SRR5818399 | Sensitive | lineage4.9 | None |
|---|
