EBG00000313325 - n.448C>A
Drug resistance types
10 Sensitive
32 RR-TB
4 HR-TB
21 MDR-TB
13 Pre-XDR-TB
0 XDR-TB
63 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.8 | 8 |
| lineage2.2.1 | 28 |
| La1.7.1 | 1 |
| lineage4 | 3 |
| lineage2.2.1.1 | 2 |
| lineage3 | 5 |
| lineage4.3.3 | 2 |
| lineage2.2 | 2 |
| 5 | |
| lineage3.1 | 1 |
| lineage1.2.1.1 | 1 |
| lineage4.1.2.1 | 5 |
| lineage4.1.1.3.1 | 2 |
| lineage4.9 | 47 |
| lineage4.8.2 | 1 |
| lineage4.5 | 1 |
| lineage1.2.1.2.1 | 1 |
| lineage4.2.2.2 | 1 |
| lineage4.3 | 1 |
| lineage4.1.1.3 | 3 |
| La1.8.1 | 2 |
| lineage4.3.2.1 | 2 |
| lineage4.1.2 | 1 |
| lineage4.4.2 | 2 |
| lineage2.2.2 | 3 |
| lineage1.1.1.1 | 1 |
| lineage4.3.4.2 | 1 |
| lineage6.2.3;lineage1.1.2 | 1 |
| lineage3.1.1 | 2 |
| lineage1.1.3.3 | 1 |
| La1.3 | 1 |
| lineage1.2.2.2 | 1 |
| lineage4.3.2 | 1 |
| La1.6 | 1 |
| La2 | 1 |
| lineage4.2.1 | 1 |
| lineage4.4 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 143 |
Geographic prevalence
Country level data for this variant is available for 8 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR19303820 | RR-TB | lineage4.8 | None | SRR21727760 | Other | lineage2.2.1 | None | SRR21469201 | Other | La1.7.1 | None | SRR22424765 | MDR-TB | lineage4 | None | SRR22175249 | Pre-XDR-TB | lineage2.2.1 | None | SRR22424778 | RR-TB | lineage2.2.1.1 | None | ERR4815556 | RR-TB | lineage3 | None | SRR22424851 | MDR-TB | lineage4.3.3 | None | SRR3619841 | Pre-XDR-TB | lineage2.2.1 | None | SRR3618864 | Pre-XDR-TB | lineage2.2.1 | None | SRR3601585 | Pre-XDR-TB | lineage2.2 | None | SRR3619764 | Pre-XDR-TB | lineage2.2 | None | ERR4817069 | RR-TB | None | SAMEA3501073 | RR-TB | lineage4.8 | None | ERR2027290 | RR-TB | lineage3.1 | None | ERR2229760 | Other | lineage4.8 | dk | ERR2027209 | MDR-TB | lineage1.2.1.1 | None | ERR2027257 | Other | lineage4.1.2.1 | None | ERR4816800 | Other | lineage4.8 | gb | SRR5818386 | Other | None | ERR2510804 | Other | lineage2.2.1 | None | ERR2513056 | HR-TB | lineage4.1.2.1 | gb | SRR5818426 | Other | None | ERR2512986 | Other | lineage3 | None | SRR5007167 | RR-TB | lineage4.1.1.3.1 | None | SRR5007161 | RR-TB | lineage4.1.1.3.1 | None | SRR5007168 | RR-TB | lineage4.9 | None | SRR5007169 | RR-TB | lineage4.8.2 | None | ERR2514173 | Other | lineage4.5 | gb | ERR4820266 | RR-TB | lineage3 | None | SRR5818385 | Other | lineage4.9 | None | ERR2514181 | Other | lineage1.2.1.2.1 | None | ERR4820586 | Other | lineage3 | gb | SRR5818445 | Other | None | SRR6046117 | RR-TB | lineage4.9 | None | ERR4821172 | RR-TB | lineage4.9 | None | ERR4822035 | Other | lineage4.8 | None | ERR4819863 | RR-TB | lineage4.9 | None | ERR2514943 | Other | lineage4.8 | gb | SRR6045537 | Pre-XDR-TB | lineage2.2.1 | None | ERR4822150 | Other | lineage4.8 | gb | SRR5818393 | Other | lineage4.9 | None | SRR5818398 | Other | lineage4.9 | None | SRR5818399 | Sensitive | lineage4.9 | None | SRR5818388 | Other | lineage4.9 | None | SRR5818389 | Other | lineage4.9 | None | SRR5818395 | Sensitive | lineage4.9 | None | SRR5818397 | Other | lineage4.9 | None | SRR5818428 | Sensitive | lineage4.9 | None | SRR5818411 | MDR-TB | lineage4.9 | None | SRR5818414 | Other | lineage4.9 | None | SRR5818413 | HR-TB | lineage4.9 | None | SRR5818432 | MDR-TB | lineage4.9 | None | SRR5818409 | Other | lineage4.9 | None | SRR5818422 | Other | lineage4.9 | None | SRR5818423 | MDR-TB | lineage4.9 | None | SRR5818429 | Sensitive | lineage4.9 | None | SRR5818435 | Sensitive | lineage4.9 | None | SRR5818425 | Other | lineage4.9 | None | SRR5818446 | Other | lineage4.9 | None | SRR5818436 | Sensitive | lineage4.9 | None | SRR5818440 | Other | lineage4.9 | None | SRR5818424 | Sensitive | lineage4.9 | None | SRR5818437 | MDR-TB | lineage4.9 | None | SRR5818449 | MDR-TB | lineage4.9 | None | SRR5818452 | Other | lineage4.9 | None | SRR5818456 | Other | lineage4.9 | None | SRR5818460 | Other | lineage4.9 | None | SRR5818469 | Other | lineage4.9 | None | SRR5818462 | Other | lineage4.9 | None | SRR5818457 | Other | lineage4.9 | None | SRR6045843 | Other | lineage4.2.2.2 | None | SRR6982141 | RR-TB | lineage4.3.3 | None | ERR2851354 | RR-TB | lineage4.9 | None | SRR6484920 | MDR-TB | lineage2.2.1 | None | SRR6044952 | RR-TB | lineage4.9 | None | SRR7131195 | Other | lineage2.2.1 | None | ERR3275941 | RR-TB | lineage4.3 | nl | SRR7131145 | Other | lineage4.1.2.1 | None | SRR6982239 | HR-TB | lineage4.1.1.3 | None | SRR6982246 | Sensitive | lineage4 | None | ERR5087596 | Other | La1.8.1 | None | SRR9971114 | Other | lineage2.2.1 | None | SRR9971333 | MDR-TB | lineage4.1.1.3 | None | SRR9970981 | RR-TB | lineage4.3.2.1 | None | SRR9970980 | Other | lineage4.1.2 | None | SRR8651633 | Pre-XDR-TB | lineage4.4.2 | None | SRR9971113 | Other | lineage2.2.1 | None | SRR9971112 | Other | lineage2.2.1 | None | SRR9971122 | MDR-TB | lineage4.8 | None | DRR184982 | RR-TB | lineage2.2.1 | None | SRR9971168 | Other | lineage4.3.2.1 | None | DRR184629 | Other | lineage2.2.1 | None | DRR185024 | Other | lineage2.2.2 | None | DRR185000 | Other | lineage1.1.1.1 | None | ERR10796597 | Other | lineage4 | None | ERR10219876 | Other | lineage4.3.4.2 | None | ERR4808964 | RR-TB | lineage2.2.1 | None | ERR3283006 | RR-TB | lineage4.9 | None | ERR3283033 | Sensitive | lineage4.9 | None | ERR3324368 | RR-TB | lineage6.2.3;lineage1.1.2 | None | ERR3797062 | RR-TB | lineage4.9 | None | ERR3797068 | Other | La1.8.1 | None | ERR4024582 | MDR-TB | lineage4.1.2.1 | None | ERR4187652 | Other | lineage4.9 | None | ERR4596904 | MDR-TB | lineage3.1.1 | None | ERR4769554 | RR-TB | lineage4.9 | None | ERR4798769 | Other | lineage1.1.3.3 | None | ERR3439265 | Other | lineage4.9 | None | ERR4457829 | MDR-TB | lineage4.1.2.1 | None | ERR4769436 | Other | La1.3 | None | ERR4809333 | Pre-XDR-TB | lineage2.2.2 | None | ERR5979454 | Pre-XDR-TB | lineage3 | None | ERR4811101 | Other | lineage4.4.2 | None | ERR9117827 | Other | lineage1.2.2.2 | None | ERR6866241 | Other | lineage4.3.2 | None | SRR11972425 | Pre-XDR-TB | lineage2.2.1 | None | ERR9285979 | RR-TB | lineage3.1.1 | None | SRR10315558 | Sensitive | lineage2.2.1 | None | SRR11972417 | MDR-TB | lineage2.2.1 | None | ERR9786164 | RR-TB | lineage4.1.1.3 | None | SRR10315567 | Other | lineage2.2.1 | None | SRR10869071 | MDR-TB | lineage2.2.1 | None | SRR10993951 | RR-TB | La1.6 | None | SRR16156188 | HR-TB | lineage4.9 | None | SRR13888750 | Other | La2 | None | SRR14782539 | MDR-TB | lineage4.2.1 | None | SRR16156775 | Other | lineage4.9 | None | SRR16156697 | MDR-TB | lineage2.2.1 | None | SRR16156751 | RR-TB | lineage4.9 | None | SRR16627752 | RR-TB | lineage4.4 | None | SRR16156832 | RR-TB | None | SRR16157123 | Other | lineage4.9 | None | SRR18002974 | Pre-XDR-TB | lineage2.2.1 | None | SRR18002963 | Other | lineage2.2.1 | None | SRR18002887 | MDR-TB | lineage2.2.1.1 | None | SRR18002947 | MDR-TB | lineage2.2.1 | None | SRR18003049 | Other | lineage2.2.1 | None | SRR18002998 | Pre-XDR-TB | lineage2.2.2 | None | SRR18003030 | Pre-XDR-TB | lineage2.2.1 | None | SRR18002981 | Other | lineage2.2.1 | None | SRR18003024 | RR-TB | lineage2.2.1 | None | SRR18003047 | MDR-TB | lineage2.2.1 | None |
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