Rv0668 - c.1266C>G
Drug resistance types
31 Sensitive
26 RR-TB
16 HR-TB
28 MDR-TB
10 Pre-XDR-TB
1 XDR-TB
54 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9 | 56 |
| lineage2.2.1 | 24 |
| lineage4 | 2 |
| lineage4.7 | 2 |
| lineage3 | 7 |
| lineage2.2.2 | 2 |
| lineage4.1.1.3 | 3 |
| lineage4.1.2.1 | 5 |
| lineage4.3.4.2.1 | 1 |
| 1 | |
| lineage4.2.1 | 5 |
| lineage4.3.3 | 5 |
| lineage1.1.1 | 1 |
| lineage4.8.1 | 3 |
| lineage4.8 | 5 |
| La1.8.1 | 4 |
| lineage4.3;lineage4.9 | 1 |
| lineage3.1.2.1 | 1 |
| lineage2.2.1.1 | 2 |
| lineage4.3 | 1 |
| lineage2.2;lineage4.9 | 1 |
| La3;lineage4.3.4 | 1 |
| lineage1.2.1.2 | 1 |
| lineage4.4.1.1.1 | 2 |
| lineage4.1.1.1 | 2 |
| La1.4 | 1 |
| lineage4.1.1.3.1 | 2 |
| lineage3.1.1 | 2 |
| lineage4.4.1.1 | 5 |
| lineage4.9;lineage6.1.3 | 1 |
| La1.7.1 | 1 |
| lineage4.3.1;lineage4.9;lineage6 | 1 |
| lineage2.2;lineage4 | 1 |
| lineage4.4 | 1 |
| lineage4.3.3;lineage4.9 | 1 |
| lineage1.1.1.1 | 1 |
| lineage2.2 | 1 |
| lineage4.3.4.1 | 3 |
| lineage3.1.3 | 1 |
| lineage4.1.1.3;lineage4.9 | 1 |
| lineage2.2.1;lineage4.9 | 1 |
| La3;lineage4.9 | 1 |
| lineage4.2.2.2 | 1 |
| lineage4.1.2 | 1 |
| La2 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 166 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR1181299 | Other | lineage4.9 | None | SRR19303931 | Other | lineage2.2.1 | None | ERR4819877 | HR-TB | lineage4.9 | None | SRR18002881 | Pre-XDR-TB | lineage2.2.1 | None | SRR1183548 | Other | lineage4.9 | None | ERR4817731 | HR-TB | lineage4.9 | None | ERR4816478 | HR-TB | lineage4 | None | ERR4817189 | Other | lineage4.7 | None | ERR3797062 | RR-TB | lineage4.9 | None | ERR4819546 | HR-TB | lineage3 | None | SRR14334194 | Pre-XDR-TB | lineage2.2.1 | None | DRR185024 | Other | lineage2.2.2 | None | ERR4816656 | Other | lineage4.9 | None | SRR3619841 | Pre-XDR-TB | lineage2.2.1 | None | SRR1062865 | Sensitive | lineage2.2.2 | None | SRR1183339 | Other | lineage4.9 | None | ERR9786164 | RR-TB | lineage4.1.1.3 | None | SRR3675312 | Sensitive | lineage4.9 | None | ERR11465490 | Sensitive | lineage4.1.2.1 | None | ERR212114 | Other | lineage4.3.4.2.1 | None | ERR4815815 | Sensitive | lineage4.9 | None | SRR11342655 | MDR-TB | lineage2.2.1 | None | SRR1180831 | Other | lineage4.9 | None | ERR4820586 | Other | lineage3 | gb | ERR4817069 | RR-TB | None | ERR323035 | Sensitive | lineage4.9 | None | SRR7755649 | MDR-TB | lineage4.2.1 | None | SRR2100067 | Other | lineage4.3.3 | None | ERR4816729 | Sensitive | lineage4.9 | None | SRR1183438 | Other | lineage4.9 | None | SRR6044952 | Other | lineage4.9 | None | SRR6045002 | RR-TB | lineage4.9 | None | ERR867570 | RR-TB | lineage4.9 | None | SRR6045217 | Sensitive | lineage4.9 | None | ERR4798823 | HR-TB | lineage4 | None | ERR4819314 | Other | lineage1.1.1 | None | ERR4819241 | Other | lineage4.9 | None | ERR10762275 | MDR-TB | lineage4.2.1 | None | SRR11342662 | MDR-TB | lineage4.8.1 | None | SRR7755657 | Other | lineage4.8 | None | SRR3742667 | Sensitive | lineage4.9 | None | SRR11342649 | MDR-TB | lineage4.3.3 | None | SRR1792025 | Other | La1.8.1 | None | ERR036207 | Other | lineage4.3;lineage4.9 | None | SRR19303820 | RR-TB | lineage4.8 | None | SRR1181269 | Other | lineage4.9 | None | SRR11972306 | Pre-XDR-TB | lineage2.2.1 | None | ERR4816717 | RR-TB | lineage3.1.2.1 | None | ERR4820773 | HR-TB | lineage4.9 | None | SRR7645899 | Other | lineage2.2.1 | None | ERR4821172 | RR-TB | lineage4.9 | None | ERR4821276 | Sensitive | lineage3 | None | ERR4817667 | HR-TB | lineage4.8 | None | SRR18909918 | Other | lineage2.2.1.1 | None | ERR9029360 | MDR-TB | lineage2.2.1 | None | SRR1182954 | Other | lineage4.9 | None | ERR3275941 | RR-TB | lineage4.3 | nl | SRR10869071 | MDR-TB | lineage2.2.1 | None | SRR3601585 | Pre-XDR-TB | lineage2.2.1 | None | ERR4815550 | Other | lineage2.2;lineage4.9 | None | SRR7755688 | Pre-XDR-TB | lineage4.2.1 | None | SRR16156775 | Other | lineage4.9 | None | ERR867567 | RR-TB | lineage3 | None | SRR10315751 | MDR-TB | lineage4.8 | None | ERR4831863 | HR-TB | lineage2.2.1.1 | None | SRR11972417 | MDR-TB | lineage2.2.1 | None | SRR11342660 | MDR-TB | lineage2.2.1 | None | ERR161039 | HR-TB | La3;lineage4.3.4 | None | SRR7645901 | MDR-TB | lineage2.2.1 | None | SRR1183067 | Other | lineage4.9 | None | ERR4815441 | HR-TB | lineage4.9 | None | SRR20969475 | Other | lineage1.2.1.2 | None | SRR11342644 | MDR-TB | lineage4.4.1.1.1 | None | SRR16156697 | RR-TB | lineage2.2.1 | None | SRR1183686 | Sensitive | lineage4.9 | None | SRR1106670 | Sensitive | lineage4.9 | None | SRR8758877 | MDR-TB | lineage4.1.1.1 | None | SRR1183152 | Other | lineage4.9 | None | SRR16278274 | Other | La1.4 | None | SRR7645972 | MDR-TB | lineage4.2.1 | None | ERR4818110 | Sensitive | lineage4.9 | None | ERR4815556 | RR-TB | lineage3 | None | SRR7070157 | Other | lineage4.1.1.3.1 | None | SRR12634609 | MDR-TB | lineage3.1.1 | None | SRR17567917 | RR-TB | lineage4.4.1.1 | None | ERR038289 | Other | lineage4.3.3 | None | ERR4819422 | HR-TB | lineage4.9 | None | SRR1173310 | Other | lineage3.1.1 | None | SRR1175474 | Other | lineage4.9 | None | ERR3445504 | Other | lineage4.9;lineage6.1.3 | None | SRR21240055 | Other | lineage4.1.2.1 | None | ERR1815538 | Other | La1.7.1 | None | SRR14782539 | MDR-TB | lineage4.2.1 | None | SRR7645928 | Other | lineage4.7 | None | SRR2101471 | Sensitive | lineage4.4.1.1 | None | SRR7645906 | Other | lineage2.2.1 | None | SRR1238559 | Other | lineage4.9 | None | ERR5162090 | RR-TB | lineage4.9 | None | SRR7755655 | Other | lineage4.1.2.1 | None | SRR11972425 | Pre-XDR-TB | lineage2.2.1 | None | SRR6982239 | Sensitive | lineage4.1.1.3 | None | SRR6046299 | Other | lineage4.3.1;lineage4.9;lineage6 | None | SRR6045548 | Sensitive | lineage4.9 | None | SRR3618864 | Pre-XDR-TB | lineage2.2.1 | None | ERR5917972 | MDR-TB | lineage4.4.1.1 | za | SRR16156832 | RR-TB | lineage2.2;lineage4 | None | ERR4818561 | Sensitive | lineage4.9 | None | SRR16627752 | RR-TB | lineage4.4 | None | SRR11342651 | MDR-TB | lineage4.1.1.1 | None | SRR1183181 | Sensitive | lineage4.9 | None | SRR1184308 | Sensitive | lineage4.9 | None | SRR11342653 | MDR-TB | lineage2.2.1 | None | SRR11342636 | MDR-TB | lineage4.3.3 | None | ERR4814639 | HR-TB | lineage4.9 | None | ERR3283032 | Other | lineage4.9 | None | ERR4596902 | MDR-TB | lineage3 | None | SRR5007193 | RR-TB | lineage4.1.1.3.1 | None | SRR7236330 | Other | La1.8.1 | None | SRR11342696 | MDR-TB | lineage4.4.1.1.1 | None | SRR1062864 | Sensitive | lineage4.9 | None | SRR6832644 | Other | lineage4.3.3;lineage4.9 | None | SRR1181569 | Other | lineage4.9 | None | ERR752012 | HR-TB | lineage1.1.1.1 | None | SRR11342647 | MDR-TB | lineage4.1.1.3 | None | ERR4799513 | HR-TB | lineage2.2 | None | ERR502470 | RR-TB | lineage4.9 | None | ERR9992879 | XDR-TB | lineage4.3.3 | None | ERR3283006 | RR-TB | lineage4.9 | None | SRR1792011 | Other | La1.8.1 | None | SRR5341456 | Other | lineage4.9 | None | ERR4818851 | RR-TB | lineage4.4.1.1 | None | SRR1175491 | MDR-TB | lineage4.3.4.1 | None | ERR5917985 | MDR-TB | lineage2.2.1 | None | SRR18572454 | RR-TB | lineage4.9 | None | SRR18913742 | Sensitive | lineage3.1.3 | None | SRR6131515 | Sensitive | lineage4.1.1.3;lineage4.9 | None | SRR15508556 | Other | lineage4.3.4.1 | None | SRR11342693 | MDR-TB | lineage4.8.1 | None | SRR11462861 | Other | La1.8.1 | None | ERR4815310 | Other | lineage2.2.1;lineage4.9 | None | SRR1175472 | RR-TB | lineage4.3.4.1 | None | ERR4816762 | Sensitive | lineage4.9 | None | ERR181744 | HR-TB | La3;lineage4.9 | None | ERR4024582 | MDR-TB | lineage4.1.2.1 | None | ERR4818929 | HR-TB | lineage4.9 | None | SRR6045359 | Sensitive | lineage4.9 | None | SRR6896383 | Sensitive | lineage4.4.1.1 | None | SRR1180094 | Other | lineage4.9 | None | SRR1013527 | Other | lineage2.2.1 | None | SRR10315558 | Sensitive | lineage2.2.1 | None | ERR4815079 | RR-TB | lineage3 | None | SRR1172807 | Sensitive | lineage4.9 | None | SRR3619764 | Pre-XDR-TB | lineage2.2.1 | None | SRR1735596 | RR-TB | lineage4.9 | None | ERR4457829 | MDR-TB | lineage4.1.2.1 | None | SRR11342687 | RR-TB | lineage4.2.2.2 | None | ERR067712 | Sensitive | lineage4.9 | None | SRR11342682 | Other | lineage4.1.2 | None | SRR7755645 | Pre-XDR-TB | lineage2.2.1 | None | SRR9971150 | RR-TB | lineage4.8.1 | None | ERR4817628 | Sensitive | lineage4.8 | gb | SRR13888750 | Other | La2 | None | SRR16156188 | Sensitive | lineage4.9 | None | SRR22424787 | Sensitive | lineage4.9 | None | SRR1141261 | Sensitive | lineage4.9 | None | DRR184629 | Other | lineage2.2.1 | None |
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