Rv0668 - c.-423C>G
Drug resistance types
27 Sensitive
42 RR-TB
23 HR-TB
37 MDR-TB
19 Pre-XDR-TB
0 XDR-TB
70 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage3 | 18 |
| La1.8.1 | 6 |
| La1.3 | 2 |
| lineage4.9 | 43 |
| lineage4.9;La1.3 | 1 |
| lineage2.2.1 | 31 |
| lineage4 | 13 |
| lineage2.2.2 | 5 |
| lineage5.1.1 | 3 |
| lineage2.2 | 8 |
| lineage4.6.2.2 | 3 |
| lineage4.3 | 1 |
| lineage4.8;lineage4.1 | 2 |
| 9 | |
| lineage4.1.1.3 | 5 |
| lineage4.1.2.1 | 5 |
| lineage4.6.1.2 | 6 |
| lineage4.9;lineage2.2.1 | 2 |
| lineage4.3.2.1 | 1 |
| lineage4.3.3 | 5 |
| lineage4.4.2 | 3 |
| lineage1.2.1.2 | 1 |
| La2 | 1 |
| La1.4 | 1 |
| lineage4.4 | 1 |
| lineage4.4.1.1 | 3 |
| lineage3.1.3 | 1 |
| lineage1.2.1.1 | 1 |
| lineage3.1 | 1 |
| lineage4.5 | 1 |
| lineage4;lineage2 | 1 |
| lineage4.8 | 8 |
| lineage4.1.1.3.1 | 3 |
| lineage4;lineage3 | 1 |
| lineage1.1.1 | 1 |
| lineage1.2.1.2.1 | 1 |
| lineage4.9;lineage4.2.1 | 1 |
| lineage4.2.2.2 | 1 |
| lineage4.3.4.2.1 | 2 |
| lineage1.2.2.2 | 1 |
| lineage3.1.1 | 1 |
| lineage4.7 | 2 |
| lineage1.1.2 | 1 |
| lineage4.3.1.1 | 1 |
| lineage4.6.1 | 1 |
| lineage4.6.1.1 | 3 |
| lineage4.2.1 | 3 |
| lineage4.9.1 | 1 |
| lineage4.1.1 | 1 |
| lineage4.4.1.2 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 218 |
Geographic prevalence
Country level data for this variant is available for 3 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR4596902 | HR-TB | lineage3 | None | ERR4627377 | Other | La1.8.1 | None | ERR4627311 | Other | La1.8.1 | None | ERR4769408 | Other | La1.3 | None | ERR4769419 | Other | lineage4.9 | None | ERR4769514 | Other | La1.3 | None | ERR4769493 | Pre-XDR-TB | lineage4.9;La1.3 | None | ERR4796472 | Pre-XDR-TB | lineage2.2.1 | None | ERR4808964 | RR-TB | lineage2.2.1 | None | ERR4798823 | HR-TB | lineage4 | None | ERR7821163 | Other | lineage2.2.1 | None | ERR4809333 | Pre-XDR-TB | lineage2.2.2 | None | ERR751330 | MDR-TB | lineage5.1.1 | None | ERR751338 | Other | lineage5.1.1 | None | ERR7911670 | Pre-XDR-TB | lineage2.2 | None | ERR9119525 | MDR-TB | lineage4.6.2.2 | None | ERR9117760 | HR-TB | lineage4.3 | None | ERR9786076 | Sensitive | lineage3 | None | ERR990545 | Other | lineage3 | None | ERR9786525 | Other | lineage4.8;lineage4.1 | None | ERR9786843 | Other | None | ERR9786164 | RR-TB | lineage4.1.1.3 | None | ERR9786526 | Other | lineage4.8;lineage4.1 | None | ERR9786656 | Sensitive | lineage4.1.2.1 | None | SRR1013530 | HR-TB | lineage4.9 | None | SRR1013527 | RR-TB | lineage2.2 | None | SRR1013531 | MDR-TB | lineage4.9 | None | SRR1013528 | Pre-XDR-TB | lineage2.2 | None | SRR10315556 | Sensitive | lineage2.2.1 | None | SRR1062865 | HR-TB | lineage2.2.2 | None | SRR1049581 | MDR-TB | lineage4.6.1.2 | None | SRR1049582 | MDR-TB | lineage4.6.1.2 | None | SRR1062864 | Sensitive | lineage4.9;lineage2.2.1 | None | SRR10869071 | MDR-TB | lineage2.2.1 | None | SRR1062867 | RR-TB | lineage4.9;lineage2.2.1 | None | SRR1062868 | HR-TB | lineage4.9 | None | SRR1062880 | MDR-TB | lineage4.6.1.2 | None | SRR11349147 | RR-TB | lineage4.3.2.1 | None | SRR1106670 | Other | lineage4.9 | None | SRR1173281 | RR-TB | lineage3 | None | SRR1140712 | MDR-TB | lineage4.6.1.2 | None | SRR11462861 | Other | La1.8.1 | None | SRR1141261 | MDR-TB | lineage4.9 | None | SRR1173185 | HR-TB | lineage4.9 | None | SRR1173450 | RR-TB | lineage4.9 | None | SRR1173310 | MDR-TB | None | SRR1180137 | Other | lineage2.2.1 | None | SRR1173719 | HR-TB | lineage3 | None | SRR1173687 | Pre-XDR-TB | lineage2.2.1 | None | SRR1180440 | Other | lineage4.9 | None | SRR1180446 | Other | lineage4.9 | None | SRR1181020 | Other | lineage2.2.1 | None | SRR1181250 | Other | lineage4.9 | None | SRR1181161 | Other | lineage4.9 | None | SRR1181289 | Other | lineage2.2.1 | None | SRR12006056 | Sensitive | lineage4.9 | None | SRR1196478 | MDR-TB | lineage4.9 | None | SRR1183049 | Other | lineage2.2 | None | SRR1184329 | MDR-TB | lineage4.9 | None | SRR11972425 | Pre-XDR-TB | lineage2.2.1 | None | SRR16156832 | RR-TB | None | SRR14801652 | MDR-TB | lineage4.3.3 | None | SRR15316595 | RR-TB | lineage4.4.2 | None | SRR16156697 | MDR-TB | lineage2.2.1 | None | SRR12006550 | Other | lineage1.2.1.2 | None | SRR13888750 | Other | La2 | None | SRR18003024 | RR-TB | lineage2.2.1 | None | SRR16278274 | Other | La1.4 | None | SRR16627752 | RR-TB | lineage4.4 | None | SRR18002881 | Pre-XDR-TB | lineage2.2.1 | None | SRR18002947 | MDR-TB | lineage2.2.1 | None | SRR18002998 | Pre-XDR-TB | lineage2.2.2 | None | SRR18003004 | Pre-XDR-TB | lineage2.2.2 | None | SRR16157123 | Other | lineage4.9 | None | SRR1735596 | RR-TB | lineage4.9 | None | SRR17567917 | RR-TB | lineage4.4.1.1 | None | SRR18002875 | MDR-TB | lineage2.2.2 | None | SRR18002903 | Pre-XDR-TB | lineage2.2.1 | None | SRR18003015 | MDR-TB | lineage2.2.1 | None | SRR18003042 | Other | lineage2.2.1 | None | SRR18003049 | Other | lineage2.2.1 | None | SRR20969542 | Other | lineage4.4.2 | None | SRR18003047 | MDR-TB | lineage2.2.1 | None | SRR18213736 | MDR-TB | lineage3 | None | SRR18911231 | Sensitive | lineage4.1.1.3 | None | SRR18913742 | Sensitive | lineage3.1.3 | None | SRR2100067 | Other | lineage4.3.3 | None | SRR21677886 | Sensitive | lineage4.9 | None | SRR22424787 | Sensitive | lineage4.9 | None | SRR3619841 | Pre-XDR-TB | lineage2.2.1 | None | ERR550636 | MDR-TB | lineage4.1.1.3 | None | SRR3601585 | Pre-XDR-TB | lineage2.2 | None | SRR3619764 | Pre-XDR-TB | lineage2.2 | None | SRR3618864 | Pre-XDR-TB | lineage2.2.1 | None | ERR4814639 | HR-TB | lineage4 | None | ERR2027209 | MDR-TB | lineage1.2.1.1 | None | SRR3675230 | RR-TB | lineage3 | None | SRR3675312 | HR-TB | lineage4 | None | ERR4815079 | RR-TB | lineage3 | None | SRR3675509 | Other | lineage4.9 | None | ERR4816702 | RR-TB | lineage4.6.2.2 | None | ERR2027290 | RR-TB | lineage3.1 | None | SRR3675552 | RR-TB | lineage4.9 | None | ERR4816466 | HR-TB | None | ERR4816548 | MDR-TB | lineage4.5 | None | ERR2027257 | Other | lineage4.1.2.1 | None | ERR4816656 | HR-TB | None | ERR4816762 | Other | lineage4;lineage2 | None | SAMN02380990 | MDR-TB | lineage4.6.1.2 | None | ERR2432997 | Other | lineage4.8 | None | ERR4817667 | HR-TB | lineage4.8 | None | ERR4817915 | RR-TB | lineage4.9 | None | ERR4815815 | Sensitive | lineage4 | None | ERR2229519 | Sensitive | lineage4.8 | None | ERR4818110 | Sensitive | lineage4.9 | None | ERR3276170 | Other | lineage4.1.2.1 | nl | ERR4819051 | Other | lineage4 | None | ERR4818929 | HR-TB | None | ERR4818536 | Other | lineage4.9 | None | ERR4818561 | HR-TB | lineage4 | None | SRR5007170 | RR-TB | lineage4.9 | None | SRR5007161 | RR-TB | lineage4.1.1.3.1 | None | SRR5007163 | MDR-TB | lineage4;lineage3 | None | SRR5007165 | MDR-TB | lineage3 | None | SRR5007167 | RR-TB | lineage4.1.1.3.1 | None | ERR2446154 | Sensitive | lineage4.4.1.1 | nl | SRR5007193 | RR-TB | lineage4.1.1.3.1 | None | ERR3275615 | Sensitive | lineage4.4.1.1 | nl | SRR5153091 | HR-TB | lineage4.3.3 | None | ERR2513830 | RR-TB | lineage4.8 | None | ERR4819314 | Other | lineage1.1.1 | None | ERR4819546 | HR-TB | lineage3 | None | ERR4819462 | Other | lineage4 | None | ERR2514181 | Other | lineage1.2.1.2.1 | None | ERR2515228 | Other | lineage2.2.1 | None | ERR4820833 | HR-TB | None | SRR6046117 | RR-TB | lineage4.9 | None | ERR4821747 | MDR-TB | lineage4.9;lineage4.2.1 | None | ERR4821276 | Other | lineage3 | None | ERR4822104 | RR-TB | lineage3 | None | ERR2747607 | Sensitive | lineage4.9 | None | ERR4821214 | RR-TB | None | ERR4821550 | Other | lineage2.2.1 | None | SRR5818586 | RR-TB | lineage4.2.2.2 | None | SRR6045603 | RR-TB | lineage4.1.1.3 | None | SRR6046151 | Sensitive | lineage4.9 | None | SRR6045928 | Other | lineage4.9 | None | SRR5818647 | RR-TB | lineage4.3.4.2.1 | None | SRR5818672 | Other | lineage1.2.2.2 | None | SRR6044780 | Other | lineage4.9 | None | SRR6044784 | MDR-TB | lineage3 | None | SRR6045010 | Other | lineage4 | None | SRR6044983 | Other | lineage3.1.1 | None | SRR6044936 | Other | lineage4 | None | SRR6045957 | Other | lineage4.9 | None | SRR6046359 | Other | lineage4.7 | None | SRR6046020 | Other | lineage3 | None | SRR6045267 | RR-TB | lineage4 | None | SRR6045359 | Sensitive | lineage4.9 | None | SRR6045424 | Other | lineage1.1.2 | None | ERR4872119 | MDR-TB | lineage4.6.2.2 | None | SRR6046616 | Other | lineage4.3.1.1 | None | SRR6046839 | Other | lineage4.9 | None | SRR6046376 | Other | lineage3 | None | SRR6046815 | Other | lineage3 | None | ERR4831545 | Pre-XDR-TB | lineage2.2 | None | SRR7131030 | Other | lineage4.1.2.1 | None | ERR323035 | Sensitive | lineage4.9 | None | ERR502517 | MDR-TB | lineage5.1.1 | None | ERR4831546 | HR-TB | lineage2.2 | None | SRR6896545 | Other | lineage4.9 | None | SRR6982365 | Other | lineage2.2.1 | None | ERR5311077 | RR-TB | La1.8.1 | None | SRR7535053 | Sensitive | lineage3 | None | SRR7535077 | MDR-TB | lineage4.6.1.2 | None | SRR7535074 | Sensitive | lineage3 | None | SRR7535054 | Sensitive | lineage4.6.1 | None | SRR7645901 | MDR-TB | lineage2.2.1 | None | SRR7535081 | Sensitive | lineage4.6.1.1 | None | SRR7535082 | Sensitive | lineage4 | None | SRR7645899 | RR-TB | lineage2.2.1 | None | SRR7535073 | Sensitive | lineage4.6.1.1 | None | SRR7535079 | Sensitive | lineage4.6.1.1 | None | SRR7535080 | HR-TB | lineage4.8 | None | SRR7645936 | Sensitive | lineage2.2.1 | None | SRR7645928 | RR-TB | lineage4.7 | None | SRR7645906 | Other | lineage2.2.1 | None | SRR7645927 | Other | lineage4.8 | None | SRR7645972 | MDR-TB | lineage4.2.1 | None | SRR9971122 | MDR-TB | lineage4.8 | None | SRR7755657 | Other | lineage4.8 | None | SRR8651633 | Pre-XDR-TB | lineage4.4.2 | None | SRR7755645 | Pre-XDR-TB | lineage2.2.1 | None | SRR7755649 | MDR-TB | lineage4.2.1 | None | SRR7755655 | Other | lineage4.1.2.1 | None | SRR7755688 | Pre-XDR-TB | lineage4.2.1 | None | ERR323068 | Sensitive | lineage4.9 | None | ERR323044 | HR-TB | lineage4.3.4.2.1 | None | ERR067712 | HR-TB | lineage4 | None | ERR038289 | Other | lineage4.3.3 | None | DRR184982 | RR-TB | lineage2.2.1 | None | ERR037504 | Other | lineage4.9.1 | None | ERR10796564 | Other | lineage4.3.3 | None | ERR1034634 | HR-TB | None | ERR1034647 | MDR-TB | lineage4.1.1.3 | None | ERR1023502 | MDR-TB | lineage2.2.1 | None | ERR10796576 | RR-TB | lineage4.9 | None | ERR10796565 | RR-TB | lineage4.9 | None | ERR10796598 | RR-TB | lineage4.9 | None | ERR10796627 | Other | lineage4 | None | ERR10796620 | Other | lineage4.1.1 | None | ERR126597 | MDR-TB | lineage4.4.1.2 | None | ERR3283006 | RR-TB | lineage4.9 | None | ERR3283051 | Other | lineage4.9 | None | ERR3797062 | RR-TB | lineage4.9 | None | ERR3468488 | RR-TB | La1.8.1 | None | ERR3439265 | Other | lineage4.9 | None | ERR3439489 | RR-TB | La1.8.1 | None |
|---|
