EBG00000313339 - n.809G>A
Drug resistance types
10 Sensitive
22 RR-TB
9 HR-TB
32 MDR-TB
11 Pre-XDR-TB
2 XDR-TB
44 Other
lineage Counts
| lineage | Count |
|---|---|
| La1.7.1 | 3 |
| lineage4.4 | 1 |
| La1.8.1 | 8 |
| lineage2.2.1 | 26 |
| La2 | 1 |
| lineage4.4.2 | 2 |
| lineage4.3.4.1 | 1 |
| lineage4.9 | 16 |
| lineage4.1.2.1 | 6 |
| lineage2.2 | 2 |
| lineage4.2.2.2 | 1 |
| 1 | |
| lineage4.8;lineage4.1.2 | 1 |
| lineage4.4.1.1 | 3 |
| lineage4.6.1.2 | 5 |
| lineage3 | 5 |
| lineage4 | 4 |
| lineage1.1.2 | 2 |
| lineage4.3.4.2.1 | 1 |
| lineage4.8 | 9 |
| lineage4.2.1.1 | 1 |
| lineage4.3.3 | 4 |
| lineage4.1 | 1 |
| lineage5.1.1 | 1 |
| lineage4.1.1.3 | 4 |
| lineage4.1.2 | 1 |
| lineage4.3.2.1 | 2 |
| lineage4.7 | 2 |
| lineage4.2.1 | 4 |
| La1.3 | 1 |
| lineage4.4.1.2 | 1 |
| lineage1.1.1.1 | 1 |
| lineage4.5 | 1 |
| lineage6.2.3;lineage1.1.2 | 1 |
| lineage4.1.1.2 | 1 |
| lineage4.9.1 | 1 |
| lineage4.8;lineage4.3.3 | 4 |
| lineage3.1.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 130 |
Geographic prevalence
Country level data for this variant is available for 5 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR21469202 | Other | La1.7.1 | None | SRR16627752 | RR-TB | lineage4.4 | None | SRR1792022 | Other | La1.8.1 | None | SRR18002991 | Pre-XDR-TB | lineage2.2.1 | None | SRR21469201 | Other | La1.7.1 | None | SRR13888750 | Other | La2 | None | SRR15316595 | RR-TB | lineage4.4.2 | None | SRR15508556 | Other | lineage4.3.4.1 | None | SRR16157123 | Other | lineage4.9 | None | SRR1792011 | Other | La1.8.1 | None | SRR21469200 | Other | La1.7.1 | None | SRR21686597 | Sensitive | lineage4.1.2.1 | None | SRR3601585 | Pre-XDR-TB | lineage2.2 | None | ERR4815143 | HR-TB | lineage4.2.2.2 | None | SRR21722120 | Sensitive | lineage4.1.2.1 | None | SRR3619841 | Pre-XDR-TB | lineage2.2.1 | None | ERR4817131 | Pre-XDR-TB | None | ERR1750941 | Sensitive | lineage4.8;lineage4.1.2 | None | SRR3619764 | Pre-XDR-TB | lineage2.2 | None | SRR3618864 | Pre-XDR-TB | lineage2.2.1 | None | ERR1750889 | Other | lineage4.4.1.1 | None | ERR4816293 | Other | lineage4.1.2.1 | None | SAMN02380990 | MDR-TB | lineage4.6.1.2 | None | ERR4817434 | Other | lineage3 | None | ERR4816868 | Other | lineage4.4.1.1 | None | ERR4817915 | RR-TB | lineage4.9 | None | ERR4820723 | RR-TB | lineage4.4.1.1 | None | ERR2513405 | Other | lineage2.2.1 | None | ERR4817617 | HR-TB | lineage4 | None | ERR3275190 | Other | lineage3 | nl | ERR4819533 | Other | lineage1.1.2 | None | ERR2446509 | Other | lineage3 | nl | SRR6044904 | Other | lineage3 | None | ERR4821987 | Sensitive | lineage4.9 | None | SRR5818647 | RR-TB | lineage4.3.4.2.1 | None | SRR6045002 | MDR-TB | lineage4.9 | None | ERR279502 | Sensitive | lineage4.8 | None | ERR4829264 | Sensitive | lineage4.8 | None | ERR1633803 | Sensitive | lineage4.8 | za | ERR4872322 | Pre-XDR-TB | lineage2.2.1 | None | ERR4796728 | Sensitive | lineage1.1.2 | in | ERR4815783 | Other | lineage4.1.2.1 | gb | SRR6785281 | Other | lineage4.2.1.1 | None | SRR6982141 | RR-TB | lineage4.3.3 | None | SRR6789624 | MDR-TB | lineage4.1 | None | ERR495033 | Sensitive | lineage4.8 | None | ERR502517 | MDR-TB | lineage5.1.1 | None | SRR9971333 | MDR-TB | lineage4.1.1.3 | None | ERR5087846 | Other | La1.8.1 | None | ERR5087596 | Other | La1.8.1 | None | SRR7131296 | Other | lineage4.3.3 | None | ERR5311077 | RR-TB | La1.8.1 | None | SRR9970980 | Other | lineage4.1.2 | None | SRR7645971 | Other | lineage2.2.1 | None | SRR7585435 | Other | lineage4.9 | None | SRR9970981 | RR-TB | lineage4.3.2.1 | None | SRR7645928 | RR-TB | lineage4.7 | None | SRR7645899 | RR-TB | lineage2.2.1 | None | SRR7645901 | MDR-TB | lineage2.2.1 | None | SRR7645906 | Other | lineage2.2.1 | None | SRR7645927 | Other | lineage4.8 | None | SRR7645972 | MDR-TB | lineage4.2.1 | None | SRR9971080 | RR-TB | lineage2.2.1 | None | SRR7645977 | MDR-TB | lineage4.2.1 | None | SRR9971065 | RR-TB | lineage2.2.1 | None | SRR9971046 | MDR-TB | lineage4.8 | None | SRR9971114 | Other | lineage2.2.1 | None | SRR7755645 | Pre-XDR-TB | lineage2.2.1 | None | SRR9971112 | Other | lineage2.2.1 | None | SRR7755655 | Other | lineage4.1.2.1 | None | SRR7755649 | MDR-TB | lineage4.2.1 | None | SRR7755688 | Pre-XDR-TB | lineage4.2.1 | None | SRR9971113 | Other | lineage2.2.1 | None | SRR7755657 | Other | lineage4.8 | None | SRR9971122 | MDR-TB | lineage4.8 | None | ERR4769436 | Other | La1.3 | None | DRR184982 | RR-TB | lineage2.2.1 | None | ERR126597 | MDR-TB | lineage4.4.1.2 | None | ERR3439265 | Other | lineage4.9 | None | ERR3468613 | RR-TB | La1.8.1 | None | SRR7765062 | Pre-XDR-TB | lineage4.1.2.1 | None | DRR185000 | Other | lineage1.1.1.1 | None | ERR036207 | Other | lineage4.9 | None | ERR1034647 | MDR-TB | lineage4.1.1.3 | None | ERR10465883 | Sensitive | lineage4.5 | None | ERR10762495 | MDR-TB | lineage2.2.1 | None | ERR3324368 | RR-TB | lineage6.2.3;lineage1.1.2 | None | ERR3439489 | RR-TB | La1.8.1 | None | ERR3468488 | RR-TB | La1.8.1 | None | ERR4811708 | HR-TB | lineage4 | None | ERR4769553 | RR-TB | lineage4.9 | None | ERR5979407 | Other | lineage3 | None | ERR5917985 | MDR-TB | lineage2.2.1 | None | ERR987707 | MDR-TB | lineage4.7 | None | ERR8975044 | Other | lineage4.1.1.2 | None | ERR037504 | Other | lineage4.9.1 | None | ERR970449 | RR-TB | lineage4.1.1.3 | None | ERR9786164 | RR-TB | lineage4.1.1.3 | None | SRR1049581 | MDR-TB | lineage4.6.1.2 | None | SRR10315567 | Other | lineage2.2.1 | None | ERR9992879 | XDR-TB | lineage4.3.3 | None | SRR1049674 | HR-TB | lineage2.2.1 | None | SRR1049582 | MDR-TB | lineage4.6.1.2 | None | SRR1049675 | HR-TB | lineage2.2.1 | None | SRR1062880 | MDR-TB | lineage4.6.1.2 | None | SRR1049676 | MDR-TB | lineage4.8;lineage4.3.3 | None | SRR1049677 | MDR-TB | lineage4.8;lineage4.3.3 | None | SRR11342634 | MDR-TB | lineage4.8 | None | SRR1062919 | HR-TB | lineage2.2.1 | None | SRR1062920 | MDR-TB | lineage4.8;lineage4.3.3 | None | SRR10869071 | MDR-TB | lineage2.2.1 | None | SRR11349135 | XDR-TB | lineage4.3.3 | None | SRR1175473 | Other | lineage4.9 | None | SRR11349147 | RR-TB | lineage4.3.2.1 | None | SRR1140574 | MDR-TB | lineage4.8;lineage4.3.3 | None | SRR1140712 | MDR-TB | lineage4.6.1.2 | None | SRR1140724 | HR-TB | lineage2.2.1 | None | SRR1173185 | HR-TB | lineage4.9 | None | SRR1173450 | RR-TB | lineage4.9 | None | SRR1180446 | Other | lineage4.9 | None | SRR1175472 | MDR-TB | lineage4 | None | SRR1175491 | MDR-TB | lineage4 | None | SRR1175474 | HR-TB | lineage4.9 | None | SRR1180440 | Other | lineage4.9 | None | SRR1184329 | MDR-TB | lineage4.9 | None | SRR11972425 | Pre-XDR-TB | lineage2.2.1 | None | SRR1196478 | MDR-TB | lineage4.9 | None | SRR11972417 | MDR-TB | lineage2.2.1 | None | SRR13423546 | Other | lineage4.4.2 | None | SRR12634609 | MDR-TB | lineage3.1.1 | None |
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