Rv1630 - c.690T>C


Drug resistance types
65 Sensitive 39 RR-TB 109 HR-TB 39 MDR-TB 13 Pre-XDR-TB 0 XDR-TB 143 Other
lineage Counts
lineage Count
105
La1.2 1
lineage3 11
lineage4 31
lineage4.9 105
lineage4.9;La1.3 1
La1.3 4
lineage2.2.1 34
lineage2 4
lineage4.8;La3 2
lineage2.2.2 3
lineage4.3.3 4
lineage4.6.1.1 2
lineage4.9.1 1
lineage4.1.2.1 15
lineage1.1.3.1 1
lineage4.6.5 1
lineage4.5 4
lineage4.1.2.1.1 1
lineage4.3.2 2
lineage1.1.2 4
lineage4.8 12
lineage4.1.3 3
lineage4.1.1 2
lineage4.6.2.2 2
lineage6 1
lineage6.3.1 1
lineage4.6.1.2 5
La1.8.1 5
lineage4.9;lineage2.2 1
lineage4.4.1.1.1 1
lineage2.2 3
lineage4.2.1 3
lineage2.1 2
lineage7;lineage2.2.1.2 1
lineage4.4.2 1
lineage4;lineage2.2 1
lineage2.2.1;La3 1
lineage4.9;La3 1
lineage3;lineage2.2.1 1
lineage4.1.1.1 1
lineage6.3;lineage2.2.1 1
lineage4.1 3
lineage4.9;lineage3.1.1 1
lineage1.2.1.1 1
lineage3.1 1
lineage4;lineage2 1
lineage3.1.3 1
lineage4.4.1.1 2
lineage4.1.1.3.1 1
lineage4.8.2 1
lineage4.7 3
lineage4.3.4.2.1 3
lineage4.8.1 1
lineage4.3.2.1 1
lineage4.4.1.2 2
La1 1
spoligotype Counts
spoligotype Count
None 408
Geographic prevalence
Country level data for this variant is available for 2 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR4407463 HR-TB None
ERR4188247 HR-TB None
ERR4188350 HR-TB None
ERR4769497 HR-TB La1.2 None
ERR4596902 HR-TB lineage3 None
ERR4769474 HR-TB lineage4 None
ERR4596910 Sensitive lineage4 None
ERR473303 Sensitive lineage4.9 None
ERR473334 HR-TB lineage4.9 None
ERR4769493 Pre-XDR-TB lineage4.9;La1.3 None
ERR4769506 Sensitive La1.3 None
ERR4769552 Other La1.3 None
ERR4769514 Other La1.3 None
ERR4808964 RR-TB lineage2.2.1 None
ERR4769554 RR-TB lineage4.9 None
ERR4769555 Other La1.3 None
ERR4796577 MDR-TB None
ERR4797054 Pre-XDR-TB lineage2 None
ERR4797588 MDR-TB lineage3 None
ERR4796351 MDR-TB lineage4.9 None
ERR4798493 MDR-TB lineage2.2.1 None
ERR4798823 HR-TB lineage4 None
ERR4800341 Other lineage3 None
ERR12015083 Other lineage4.8;La3 None
ERR5336148 Other None
ERR4809333 Pre-XDR-TB lineage2.2.2 None
ERR4810741 HR-TB None
ERR4811105 HR-TB None
ERR4811022 HR-TB None
ERR6359070 Other lineage4.9 None
ERR5908228 Other lineage4.3.3 None
ERR5987263 MDR-TB lineage2.2.1 None
ERR6358755 Other lineage4.6.1.1 None
ERR245758 Other lineage4.9.1 None
ERR6359069 Other lineage4.9 None
ERR6866125 Sensitive lineage4.1.2.1 None
ERR702406 HR-TB None
ERR736831 HR-TB lineage4.9 None
ERR736848 HR-TB None
ERR736837 Other lineage4.9 None
ERR736867 HR-TB None
ERR8479578 Sensitive lineage1.1.3.1 None
ERR736874 HR-TB None
ERR7801176 RR-TB lineage4.6.5 None
ERR752229 Other lineage4.5 None
ERR760733 MDR-TB lineage4.1.2.1.1 None
ERR772255 MDR-TB lineage4.3.2 None
ERR8976043 HR-TB None
ERR9117721 HR-TB lineage1.1.2 None
ERR9117709 HR-TB None
ERR9119096 Other lineage4.3.3 None
ERR9117805 Other lineage4.3.2 None
ERR9786604 Other None
ERR9634265 Sensitive None
ERR9119733 MDR-TB lineage2.2.1 None
ERR9786421 Other lineage4.1.2.1 None
ERR9786515 Other lineage4.1.2.1 None
ERR9786569 Other lineage4.8 None
ERR9786611 HR-TB lineage4.1.3 None
ERR9786617 Other lineage4.1.1 None
ERR9786639 Sensitive lineage4.8 None
ERR9786601 Other lineage4.1.2.1 None
ERR9786642 Other lineage4.1.2.1 None
ERR9786645 Other lineage4.6.2.2 None
ERR9786627 Other lineage4.1.2.1 None
ERR9786682 Other lineage4.1.2.1 None
ERR9786671 Other None
ERR9787165 Other lineage6 None
ERR9786694 Other lineage4.1.2.1 None
ERR9787139 Other lineage6.3.1 None
SRR10315567 Other lineage2.2.1 None
ERR9787197 Other None
SRR10315551 Sensitive lineage2.2.1 None
SRR1062880 MDR-TB lineage4.6.1.2 None
SRR1049582 MDR-TB lineage4.6.1.2 None
SRR10315751 MDR-TB lineage4.8 None
SRR1049581 MDR-TB lineage4.6.1.2 None
SRR10808399 Sensitive lineage4 None
SRR10869071 MDR-TB lineage2.2.1 None
SRR10808668 Sensitive lineage2.2.1 None
SRR1140712 MDR-TB lineage4.6.1.2 None
SRR1172234 Other None
SRR11462861 Other La1.8.1 None
SRR1169194 Other None
SRR1172717 Other lineage4.9 None
SRR1172728 MDR-TB None
SRR1172885 HR-TB lineage4.9 None
SRR1172807 Sensitive lineage4.9 None
SRR1172817 HR-TB None
SRR1173281 RR-TB lineage3 None
SRR1173118 Other None
SRR1173385 Sensitive lineage4.9 None
SRR1173310 MDR-TB None
SRR1173740 Other None
SRR1173633 HR-TB lineage4.9 None
SRR1173629 Other None
SRR1173687 Pre-XDR-TB lineage2.2.1 None
SRR1173706 Other lineage4.9 None
SRR1173384 Other lineage4 None
SRR1173515 HR-TB lineage4.9 None
SRR1173788 Other None
SRR1173778 Other None
SRR1180250 Other lineage4.9 None
SRR1175052 HR-TB lineage4.9 None
SRR1175074 MDR-TB None
SRR1175090 Other lineage4.9 None
SRR1175487 Sensitive lineage4.9 None
SRR1175506 Sensitive lineage4.9 None
SRR1180148 Sensitive lineage4.9 None
SRR1175512 Sensitive lineage4.9 None
SRR1175513 Other lineage4.9 None
SRR1180300 Sensitive lineage4.9 None
SRR1180355 Sensitive lineage4.9 None
SRR1180312 Sensitive lineage4.9 None
SRR1180319 Sensitive lineage4.9 None
SRR1180345 Other lineage4.9 None
SRR1180375 Sensitive lineage4.9 None
SRR1180406 Sensitive lineage4.9 None
SRR1180391 Sensitive lineage4.9 None
SRR1180399 Sensitive lineage4.9 None
SRR1180420 Sensitive lineage4.9 None
SRR1180410 Sensitive lineage4.9;lineage2.2 None
SRR1180413 Sensitive lineage4.9 None
SRR1180444 Sensitive lineage4.9 None
SRR1180440 Other lineage4.9 None
SRR1181368 Other lineage4.9 None
SRR1181214 Other lineage4.9 None
SRR1181283 Sensitive lineage4.9 None
SRR1181325 Sensitive lineage4.9 None
SRR1181349 Sensitive lineage4.4.1.1.1 None
SRR1181351 Sensitive lineage4.9 None
SRR1180446 Other lineage4.9 None
SRR1180977 Sensitive lineage4.9 None
SRR1181237 Sensitive lineage2.2 None
SRR1181390 Sensitive lineage2 None
SRR1183054 Sensitive lineage4.9 None
SRR1181402 Sensitive lineage4.9 None
SRR1184329 MDR-TB lineage4.9 None
SRR1184021 Sensitive lineage4.9 None
SRR1184308 Sensitive lineage4.9 None
SRR1184312 HR-TB lineage2.2.1 None
SRR1184372 MDR-TB None
SRR1196478 MDR-TB lineage4.9 None
SRR15368973 Other None
SRR1196677 HR-TB lineage2 None
SRR11972417 MDR-TB lineage2.2.1 None
SRR12142339 HR-TB lineage2.2.1 None
SRR14782539 MDR-TB lineage4.2.1 None
SRR14801749 Sensitive None
SRR14802079 MDR-TB lineage4.2.1 None
SRR1196494 MDR-TB None
SRR1196545 HR-TB lineage4.9 None
SRR11972425 Pre-XDR-TB lineage2.2.1 None
SRR12416824 HR-TB None
SRR16156188 HR-TB lineage4.9 None
SRR16156832 RR-TB None
SRR16156697 MDR-TB lineage2.2.1 None
SRR1791696 Other La1.8.1 None
SRR1710057 Other lineage2.1 None
SRR16157123 Other lineage4.9 None
SRR25827687 MDR-TB lineage1.1.2 None
SRR1735596 RR-TB lineage4.9 None
SRR19303884 HR-TB None
SRR18910194 HR-TB lineage2.2 None
SRR18213713 HR-TB lineage4.5 None
SRR18549032 HR-TB lineage7;lineage2.2.1.2 None
SRR19304036 HR-TB None
SRR20632814 Sensitive lineage4 None
SRR8692897 Other lineage4.9 None
SRR21677886 Sensitive lineage4.9 None
SRR22424765 MDR-TB lineage4 None
ERR11081258 Other lineage4.8 None
SRR8692807 Other lineage4.9 None
SRR8692893 Other lineage4.9 None
SRR20969542 Other lineage4.4.2 None
SRR20969677 HR-TB lineage2 None
SRR25827682 Other None
SRR22424787 Sensitive lineage4.9 None
SRR8692812 Other lineage4.9 None
SRR26159043 Other lineage4.9 None
SRR8692887 Other None
SRR8692863 Other lineage4;lineage2.2 None
SRR8692791 Other lineage4.9 None
SRR26937071 MDR-TB lineage2.2.1;La3 None
SRR26399973 Other lineage4.9;La3 None
SRR25827497 Pre-XDR-TB lineage3;lineage2.2.1 None
SRR25827507 MDR-TB lineage4.1.1.1 None
SRR28119811 Other lineage6.3;lineage2.2.1 None
ERR4815171 HR-TB lineage1.1.2 None
ERR4815604 HR-TB None
SRR3675464 HR-TB lineage4.1 None
ERR176778 HR-TB None
ERR176779 HR-TB None
ERR4814352 HR-TB lineage2.2.1 None
ERR176793 Other lineage4.1.1 None
ERR1035239 HR-TB None
SRR3675465 HR-TB None
ERR161033 HR-TB None
SRR3619841 Pre-XDR-TB lineage2.2.1 None
SRR3416776 Other lineage2.1 None
ERR4814639 HR-TB lineage4 None
ERR4814623 Other lineage4.8 None
ERR4814700 Other lineage4.3.3 None
SRR3675221 HR-TB None
ERR4814763 Other lineage2.2.1 None
ERR4815471 Other lineage4.9 None
ERR171142 Other lineage4.9;lineage3.1.1 None
SRR3675236 HR-TB None
ERR4814734 Other lineage1.2.1.1 None
SRR3675311 Other None
SRR3675232 Other lineage4.1.2.1 None
ERR4815910 Other lineage4.1.2.1 None
ERR181887 HR-TB None
ERR4815556 RR-TB lineage3 None
SAMEA3501073 RR-TB lineage4.8 None
ERR4815079 RR-TB lineage3 None
ERR176651 HR-TB None
ERR4815752 Other lineage4.9 None
ERR4816964 Other lineage4.9 None
SRR3675510 Other None
ERR4816470 Other lineage3 None
ERR4816999 Other None
SRR3675572 Other None
ERR212125 HR-TB lineage4 None
ERR2027263 Other lineage4 None
SRR3675545 HR-TB None
ERR2027290 RR-TB lineage3.1 None
ERR4817060 RR-TB None
SRR3675558 HR-TB None
ERR2229154 Sensitive lineage4.8 None
ERR4817069 RR-TB None
ERR4816548 MDR-TB lineage4.5 None
ERR212138 HR-TB lineage4 None
ERR2229233 Sensitive lineage4 None
ERR4816756 RR-TB None
SRR3742665 HR-TB None
ERR4817204 RR-TB lineage4.9 None
ERR4816585 Other lineage2.2 None
ERR4816856 Other lineage4.1.2.1 None
ERR4816762 Other lineage4;lineage2 None
SRR4033549 HR-TB lineage2.2.2 None
SAMN02380990 MDR-TB lineage4.6.1.2 None
ERR4818646 Sensitive lineage4.1.2.1 None
ERR4815815 Sensitive lineage4 None
ERR4817667 HR-TB lineage4.8 None
ERR4818710 Sensitive lineage4.9 None
ERR4817826 RR-TB lineage4.5 None
ERR4817735 Other lineage4.8 None
ERR4816425 Other lineage2.2.2 None
SRR7496472 Other None
ERR4817896 HR-TB lineage2.2.1 None
ERR4817893 Other lineage4.8;La3 None
ERR4819012 Other lineage1.1.2 None
ERR4817915 RR-TB lineage4.9 None
ERR2510756 HR-TB lineage2.2.1 None
ERR2513121 Sensitive lineage3.1.3 None
ERR4818021 Other La1.8.1 None
ERR4818851 RR-TB lineage4.4.1.1 None
ERR4818110 Sensitive lineage4.9 None
ERR234659 HR-TB None
ERR2446566 Other lineage4.1 None
ERR4819017 RR-TB lineage3 None
ERR3275196 Other lineage2.2.1 nl
ERR4818536 Other lineage4.9 None
ERR4819051 Other lineage4 None
SRR5341365 Pre-XDR-TB lineage3 None
SRR5007161 RR-TB lineage4.1.1.3.1 None
SRR5007168 RR-TB lineage4.9 None
SRR5007169 RR-TB lineage4.8.2 None
ERR4818615 Other None
ERR4817584 MDR-TB lineage3 None
ERR4820324 Other lineage4 None
ERR4820854 Other lineage4.1.2.1 None
ERR4819357 Other lineage4.9 None
ERR4819462 Other lineage4 None
ERR4819781 Other lineage2.2.1 None
ERR2514327 HR-TB lineage4.8 None
ERR4819641 HR-TB lineage4.6.2.2 None
ERR4819546 HR-TB lineage3 None
SRR5341456 Other None
ERR4819910 Other lineage4.9 None
SRR5341302 HR-TB None
ERR2446563 Other lineage2.2.1 nl
SRR5341333 HR-TB None
SRR5341330 HR-TB None
ERR1023509 Other None
ERR4819933 Other lineage4.9 None
ERR4819932 Other lineage4.7 None
ERR4820151 RR-TB lineage4.8 None
ERR4821811 RR-TB lineage4.9 None
ERR2693238 HR-TB lineage4.9 None
SRR5431730 Other La1.8.1 None
ERR4822261 RR-TB lineage2.2.1 None
ERR4821214 RR-TB None
ERR4821057 HR-TB lineage4 None
SRR6046117 RR-TB lineage4.9 None
ERR4821334 RR-TB lineage4.1.3 None
ERR4821550 Other lineage2.2.1 None
ERR4821655 Sensitive lineage4 None
SRR6046141 Other lineage4.9 None
ERR4821704 MDR-TB lineage4.3.3 None
SRR6044835 Sensitive lineage4 None
SRR6045795 HR-TB lineage2.2.1 None
SRR6045832 HR-TB lineage4.9 None
SRR6045892 Sensitive None
SRR6044780 Other lineage4.9 None
SRR6044790 HR-TB None
SRR6044875 HR-TB lineage4.9 None
SRR6045010 Other lineage4 None
SRR6044876 Sensitive lineage4 None
SRR6044911 Sensitive lineage4.9 None
SRR6044952 RR-TB lineage4.9 None
SRR6045002 MDR-TB lineage4.9 None
SRR6045191 Sensitive lineage4.9 None
SRR6046210 Other lineage4 None
SRR6046046 Other None
SRR6046253 HR-TB lineage4.9 None
SRR6046066 HR-TB None
SRR6045359 Sensitive lineage4.9 None
SRR6046540 HR-TB None
SRR6046259 Sensitive lineage4.9 None
SRR6046299 HR-TB None
SRR6046305 Other lineage4.9 None
ERR4829816 RR-TB lineage4.4.1.1 None
SRR6046492 Other None
SRR6046839 Other lineage4.9 None
SRR6046737 Other lineage4.9 None
ERR323037 HR-TB lineage4 None
SRR6458423 HR-TB lineage2.2.1 None
ERR502470 RR-TB lineage4.9 None
ERR4872322 Pre-XDR-TB lineage2.2.1 None
ERR485006 HR-TB lineage4.9 None
ERR11466146 Other lineage4.3.4.2.1 None
ERR4831117 HR-TB None
SRR6789624 MDR-TB lineage4.1 None
SRR6785263 Sensitive lineage2.2.1 None
ERR294248 HR-TB None
SRR6789626 Other None
SRR6831718 Pre-XDR-TB lineage2.2.1 None
ERR5311099 HR-TB None
ERR502532 HR-TB None
SRR7496517 Other None
ERR5311081 HR-TB None
ERR5311090 HR-TB None
SRR7496509 Other None
SRR7131023 Other lineage4.1.2.1 None
SRR9971270 RR-TB lineage2.2.1 None
SRR7496471 Sensitive None
SRR7585435 Other lineage4.9 None
SRR7535086 Other None
SRR7496523 Other lineage4.7 None
SRR7535047 RR-TB lineage4.6.1.1 None
SRR9971150 RR-TB lineage4.8.1 None
SRR7645928 RR-TB lineage4.7 None
SRR9971080 RR-TB lineage2.2.1 None
SRR9970981 RR-TB lineage4.3.2.1 None
SRR7645906 Other lineage2.2.1 None
SRR7645972 MDR-TB lineage4.2.1 None
SRR9971112 Other lineage2.2.1 None
ERR323041 HR-TB None
ERR323044 HR-TB lineage4.3.4.2.1 None
ERR323043 HR-TB None
ERR323056 HR-TB lineage4.4.1.2 None
SRR7796666 Pre-XDR-TB lineage2.2.1 None
ERR323048 Pre-XDR-TB lineage4.9 None
ERR036207 Other lineage4.9 None
ERR067712 HR-TB lineage4 None
ERR1063862 HR-TB None
ERR1035157 Other lineage4.9 None
ERR126597 MDR-TB lineage4.4.1.2 None
ERR10796598 RR-TB lineage4.9 None
ERR108471 HR-TB lineage4 None
ERR11049020 Other lineage4.8 None
ERR108125 Pre-XDR-TB lineage4.9 None
ERR3283036 HR-TB None
ERR3283008 Other lineage4.9 None
ERR3283028 Other None
ERR3283043 Other lineage4.9 None
ERR11465626 Sensitive lineage4.3.4.2.1 None
ERR3283006 RR-TB lineage4.9 None
ERR3283010 Other La1 None
ERR3283013 MDR-TB lineage4 None
ERR3283014 HR-TB None
ERR3283025 HR-TB None
ERR3283027 HR-TB None
ERR3283031 HR-TB None
ERR3445504 HR-TB None
ERR3283047 HR-TB None
ERR3283055 HR-TB None
ERR3439265 Other lineage4.9 None
ERR3283057 HR-TB lineage4 None
ERR3468544 HR-TB None
ERR3797062 RR-TB lineage4.9 None
ERR3797016 HR-TB None
ERR3797048 HR-TB None
ERR3797023 HR-TB La1.8.1 None
ERR3797046 HR-TB None
ERR3797063 HR-TB None
ERR3797065 MDR-TB lineage4 None
ERR3797069 Other None
ERR3797064 Sensitive None
ERR3797079 Sensitive lineage4 None
ERR3797081 Sensitive lineage4 None
ERR3797082 Other lineage4.9 None
ERR3797086 Other lineage4.9 None
ERR3804169 HR-TB lineage4.1.3 None
ERR3797087 Sensitive lineage4 None
ERR3804155 Other lineage4.1.2.1 None