Rv1630 - c.690T>C


Drug resistance types
51 Sensitive 34 RR-TB 56 HR-TB 58 MDR-TB 7 Pre-XDR-TB 1 XDR-TB 162 Other
lineage Counts
lineage Count
lineage4.9 118
La1.7;lineage4.9 2
18
lineage4.9;lineage6.3 5
M.canetti;lineage2.1;lineage4.9 16
La3;lineage2.1;lineage6.3 1
lineage4.4.1.1.1 2
lineage2.2.2 3
La3;M.canetti;lineage2.2.1 1
lineage2.1;lineage4.9;lineage6.3 7
lineage2.1;lineage4.9 14
lineage2.2.1 25
La1.2.BCG 3
lineage4.9.1 1
La3;lineage4.9 10
lineage4.8 12
lineage2.1;lineage6.3 2
M.canetti 1
lineage3 8
lineage1.2.1.1 1
lineage2.2;lineage4 2
La1.8.1 4
lineage4.1.2.1 12
lineage2.2.1;lineage4 1
lineage2.2.1;lineage6.3 1
M.canetti;lineage2.1;lineage4.9;lineage6.3 3
lineage4 4
La3;M.canetti;lineage4.8;lineage4.9 1
lineage4.1.1.3 2
lineage3;lineage4 1
lineage3.1.1;lineage4.9 1
lineage4.1.3 3
lineage2.2.1.2;lineage7 1
lineage2;lineage4.9 1
lineage4.3.3 4
lineage4.3.2.1 3
La3 2
lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 1
lineage4.4.1.2 2
La3;lineage4.8 2
La3;lineage2 1
lineage4.9;lineage7 1
lineage2.2.1;lineage4.9 2
lineage4.8.1 1
M.canetti;lineage2.1 1
La3;lineage2.1;lineage4.9 2
M.canetti;lineage2.1;lineage6.3 1
lineage4.6.1.2 3
La3;lineage2.1;lineage4.9;lineage6.3 3
La1.7.1 1
lineage4.6.2.2 1
lineage2.1;lineage4.9;lineage6.3;lineage8 1
lineage4.7 2
lineage4.1.1.1 4
M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 1
lineage3.1.3 1
lineage2.1 4
lineage4.6.5 1
M.canetti;lineage4.9 1
lineage4.6.1.1 2
lineage4.4.2 1
lineage4.4.1.1 2
lineage4.5 2
lineage4.3.2 1
lineage4.1.2.1.1 1
lineage2.1;lineage4.3.2 1
lineage4.9;lineage9 1
lineage4.3.4.2.1 3
La3;lineage2.2.1 1
M.canetti;lineage2.1;lineage4.9;lineage6.3;lineage8 1
lineage1.1.3.1 1
La1;lineage4.9 1
lineage4.3.4.2 1
lineage2.1;lineage2.2;lineage6.3 1
lineage1.1.2 1
lineage6.3.1 1
lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 1
La3;lineage1.1.2 1
M.canetti;lineage4.1.1.3;lineage6.3;lineage8 1
M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 1
lineage4.2.1 2
La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 1
lineage2.2.1;lineage3 1
lineage4.9;lineage6.1.3 1
La1.2.BCG;lineage4.9 1
lineage4.3.1;lineage4.9;lineage6 1
La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 1
lineage6.1.3 1
La3;lineage4 1
spoligotype Counts
spoligotype Count
None 369
Geographic prevalence
Country level data for this variant is available for 1 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR108125 RR-TB lineage4.9 None
ERR971389 Other lineage4.9 None
ERR3283025 MDR-TB La1.7;lineage4.9 None
SRR6045359 HR-TB lineage4.9 None
ERR9786671 Other None
SRR28119717 Other lineage4.9;lineage6.3 None
ERR9786604 Other None
ERR4815604 Other None
ERR4817069 RR-TB None
ERR9787197 Other None
SRR3675236 Other None
SRR28119805 Other lineage4.9 None
ERR4816999 Other None
SRR28119777 Other lineage4.9 None
ERR4188342 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR4810741 HR-TB La3;lineage2.1;lineage6.3 None
ERR1035239 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR3675275 Other lineage4.9 None
SRR3675524 Other lineage4.9;lineage6.3 None
ERR176651 Other lineage4.9 None
SRR1181403 Other lineage4.9 None
SRR1180345 Other lineage4.9 None
SRR1181215 Sensitive lineage4.4.1.1.1 None
ERR4769493 Other lineage4.9 None
ERR4809333 Pre-XDR-TB lineage2.2.2 None
SRR3742657 Pre-XDR-TB La3;M.canetti;lineage2.2.1 None
ERR6359070 Sensitive lineage4.9 None
ERR3283027 Other lineage2.1;lineage4.9;lineage6.3 None
SRR6046046 Other lineage4.9 None
SRR1181256 Other lineage4.9 None
ERR294248 MDR-TB lineage2.1;lineage4.9 None
SRR16156697 RR-TB lineage2.2.1 None
SRR1915479 Other La1.2.BCG None
ERR5311081 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR4811022 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR245758 Other lineage4.9.1 None
SRR26399973 Other La3;lineage4.9 None
ERR4817735 Other lineage4.8 None
SRR19303884 Other lineage2.1;lineage6.3 None
ERR266123 Other M.canetti None
ERR5311100 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR5311101 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR6045832 Other lineage4.9 None
ERR3797048 Other La3;lineage4.9 None
SRR6046141 Other lineage4.9 None
ERR4596902 MDR-TB lineage3 None
ERR3283031 Other La3;lineage4.9 None
SRR6045242 Other lineage2.1;lineage4.9 None
ERR4814734 Other lineage1.2.1.1 None
ERR926154 Sensitive lineage4.9 None
ERR926157 Other lineage4.9 None
SRR1735596 RR-TB lineage4.9 None
SRR16156832 RR-TB lineage2.2;lineage4 None
SRR1791696 RR-TB La1.8.1 None
ERR3797016 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR9786627 Other lineage4.1.2.1 None
SRR1175487 Sensitive lineage4.9 None
ERR181887 Other lineage4.9 None
SRR6046066 Other lineage4.9 None
SRR3675216 Other lineage2.1;lineage4.9 None
SRR1181237 Sensitive lineage2.2.1;lineage4 None
SRR28119811 Other lineage2.2.1;lineage6.3 None
ERR5311078 MDR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR1181349 Sensitive lineage4 None
SRR1180312 Sensitive lineage4.9 None
SRR26159043 Other lineage4.9 None
ERR038268 MDR-TB La3;M.canetti;lineage4.8;lineage4.9 None
SRR22424787 Sensitive lineage4.9 None
ERR4816470 HR-TB lineage3 None
ERR3797063 Other La3;lineage4.9 None
SRR10315567 HR-TB lineage2.2.1 None
SRR7496471 Sensitive lineage4 None
ERR3283011 Other La3;lineage4.9 None
SRR6789624 HR-TB lineage4.1.1.3 None
SRR9971270 RR-TB lineage2.2.1 None
SRR7645906 Other lineage2.2.1 None
SRR11972417 MDR-TB lineage2.2.1 None
ERR485006 HR-TB lineage4.9 None
ERR1063862 HR-TB lineage4.9 None
SRR6785263 Sensitive lineage2.2.1 None
SRR1173740 Other lineage3;lineage4 None
SRR6046210 Other lineage4.9 None
ERR171142 Other lineage3.1.1;lineage4.9 None
SRR1181325 Sensitive lineage4.9 None
SRR1180355 Sensitive lineage4.9 None
ERR4821334 Other lineage4.1.3 None
SRR18549032 HR-TB lineage2.2.1.2;lineage7 None
SRR6046540 Other lineage2.1;lineage4.9 None
SRR3675221 Other lineage4.9 None
SRR1180319 Sensitive lineage4.9 None
SRR5431730 Other La1.8.1 None
SRR1180946 Sensitive lineage2;lineage4.9 None
SRR8692863 Other lineage2.2;lineage4 None
ERR4821704 Other lineage4.3.3 None
ERR4596910 Sensitive lineage4.9 None
SRR12708396 MDR-TB lineage4.3.2.1 None
ERR4818646 Sensitive lineage4.1.2.1 None
ERR3468544 RR-TB lineage2.1;lineage4.9 None
SRR1172728 RR-TB La3 None
ERR978767_ERR978765_ERR978766 RR-TB lineage4.8 None
SRR6044875 Other lineage4.9 None
ERR11049020 Other lineage4.8 None
ERR1334034 Other lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 None
SRR6044876 Sensitive lineage4.9 None
SRR1180444 Sensitive lineage4.9 None
ERR9786611 HR-TB lineage4.1.3 None
ERR126597 HR-TB lineage4.4.1.2 None
SRR3675457 Other lineage4.9 None
ERR12015083 Other La3;lineage4.8 None
ERR10796598 Other lineage4.9 None
SRR20969677 HR-TB La3;lineage2 None
ERR4831117 HR-TB lineage4.9;lineage7 None
SRR1184114 Sensitive lineage2.2.1;lineage4.9 None
SRR12708389 MDR-TB lineage4.8.1 None
ERR323041 MDR-TB M.canetti;lineage2.1 None
SRR5341302 Other La3;lineage2.1;lineage4.9 None
ERR502532 Other M.canetti;lineage2.1;lineage6.3 None
SRR1140712 MDR-TB lineage4.6.1.2 None
ERR502470 RR-TB lineage4.9 None
SRR1915485 Other La1.2.BCG None
ERR4188350 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR3675517 Other La3;lineage2.1;lineage4.9;lineage6.3 None
SRR1180413 Sensitive lineage4.9 None
SRR1172817 Other La3 None
SRR3675490 Other lineage2.1;lineage4.9;lineage6.3 None
ERR1023509 MDR-TB lineage4.9 None
ERR4817915 Other lineage4.9 None
SRR1180446 Other lineage4.9 None
SRR1181390 Sensitive lineage2.2.1;lineage4.9 None
ERR3275196 RR-TB lineage2.2.1 nl
SRR7240492 MDR-TB La1.7.1 None
ERR926155 Other lineage4.9 None
SRR1175506 Sensitive lineage4.9 None
SRR1915487 Other La1.2.BCG None
ERR9786645 Other lineage4.6.2.2 None
SRR1165667 Other lineage4.9;lineage6.3 None
SRR3675464 MDR-TB lineage2.1;lineage4.9;lineage6.3;lineage8 None
SRR7131023 Other lineage4.1.2.1 None
SRR1180410 Sensitive lineage4.9 None
SRR7496523 Other lineage4.7 None
ERR9786617 Other lineage4.1.1.1 None
ERR9786682 Other lineage4.1.2.1 None
SRR5341456 Other lineage4.9 None
ERR926161 Sensitive lineage4.9 None
ERR9119096 RR-TB lineage4.3.3 None
ERR9786642 Other lineage4.1.2.1 None
SRR7496509 Other None
SRR28119756 Other lineage4.9;lineage6.3 None
SRR1184372 MDR-TB None
ERR9117709 Other None
SRR7535086 Other None
SRR28044634 Other lineage3 None
SRR18213713 HR-TB None
SRR25827682 Other None
SRR7496517 Other None
ERR4407463 HR-TB None
SRR1180406 Sensitive lineage4.9 None
ERR9786639 Sensitive lineage4.8 None
ERR3797029 Other lineage4.9 None
ERR4798493 MDR-TB lineage2.2.1 None
SRR1180300 Sensitive lineage4.9 None
ERR4800341 HR-TB lineage3 None
SRR3742665 HR-TB M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 None
ERR4822261 RR-TB lineage2.2.1 None
SRR20632814 Sensitive lineage4.9 None
ERR2513121 Sensitive lineage3.1.3 None
SRR3675581 Other lineage2.1;lineage4.9 None
SRR1710057 Other lineage2.1 None
SRR6046492 Other lineage4.9 None
SRR1049582 MDR-TB lineage4.6.1.2 None
ERR4816964 HR-TB lineage4.9 None
ERR3797069 Other lineage4.9 None
SRR18910194 HR-TB lineage2.2.2 None
ERR4819932 Other lineage4.7 None
SRR11462861 Other La1.8.1 None
ERR4817204 Other lineage4.9 None
SAMEA3501073 RR-TB lineage4.8 None
ERR7801176 RR-TB lineage4.6.5 None
ERR9786569 Other lineage4.8 None
SRR3675529 Other lineage2.1;lineage4.9;lineage6.3 None
ERR176741 Other lineage4.9 None
SRR3675487 MDR-TB M.canetti;lineage4.9 None
SRR10869071 MDR-TB lineage2.2.1 None
ERR4811105 HR-TB La3;lineage2.1;lineage4.9;lineage6.3 None
ERR6358755 Other lineage4.6.1.1 None
ERR4811311 Other lineage2.1;lineage4.9;lineage6.3 None
ERR3283019 Other lineage2.1;lineage4.9 None
ERR4816762 Sensitive lineage4.9 None
ERR4818536 Other lineage4.9 None
ERR3797023 MDR-TB La1.8.1 None
ERR736837 Pre-XDR-TB lineage4.9 None
SRR1181351 Sensitive lineage4.9 None
SRR16156817 Other lineage4.9 None
SRR20969542 Other lineage4.4.2 None
SRR8552928 HR-TB lineage2.1;lineage4.9;lineage6.3 None
SRR14801749 HR-TB lineage4.9 None
ERR4829816 RR-TB lineage4.4.1.1 None
ERR323043 Other lineage2.1;lineage4.9 None
ERR4816548 HR-TB lineage4.5 None
SRR6789621 Other lineage4.9 None
ERR161033 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR1181283 Sensitive lineage4.9 None
ERR926158 Sensitive lineage4.9 None
ERR926160 Other lineage4.9 None
ERR5311096 MDR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR3283047 Sensitive La3;lineage4.9 None
ERR926163 Other lineage4.9 None
ERR9117805 Other lineage4.3.2 None
ERR3797070 Other lineage4.9 None
ERR176779 HR-TB lineage4.9 None
SRR1180250 Other lineage4.9 None
ERR926159 Sensitive lineage4.9 None
SRR11342664 MDR-TB lineage2.2.2 None
SRR1175513 Sensitive lineage4.9 None
ERR9786421 Other lineage4.1.2.1 None
ERR323037 Other lineage4.9 None
ERR108471 HR-TB lineage4.9 None
SRR1184308 RR-TB lineage4.9 None
ERR736831 Other lineage4.9 None
ERR760733 MDR-TB lineage4.1.2.1.1 None
SRR7535047 RR-TB lineage4.6.1.1 None
ERR3804155 Other lineage4.1.2.1 None
ERR736859 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR3797062 RR-TB lineage4.9 None
ERR5311099 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR3283036 Other lineage2.1;lineage4.9 None
ERR926164 Other lineage4.9 None
ERR9786694 Other lineage4.1.2.1 None
ERR736867 Other lineage2.1;lineage4.9 None
SRR1175512 Sensitive lineage4.9 None
ERR772255 MDR-TB lineage2.1;lineage4.3.2 None
SRR1180399 Sensitive lineage4.9 None
ERR3797046 HR-TB lineage4.9 None
ERR11081258 Other lineage4.8 None
SRR6046720 HR-TB lineage4.9;lineage9 None
ERR4797588 MDR-TB lineage3 None
SRR3416776 Other lineage2.1 None
ERR3468607 RR-TB lineage4.9 None
ERR4815752 Other lineage4.9 None
ERR323044 HR-TB lineage4.3.4.2.1 None
SRR26937071 MDR-TB La3;lineage2.2.1 None
ERR323056 HR-TB lineage4.4.1.2 None
ERR212125 HR-TB lineage4.9 None
ERR9786601 Other lineage4.1.2.1 None
SRR6045892 Sensitive lineage4.9 None
ERR5908228 RR-TB lineage4.3.3 None
ERR5987263 MDR-TB lineage2.2.1 None
ERR11466146 Other lineage4.3.4.2.1 None
SRR11342644 MDR-TB lineage4.4.1.1.1 None
SRR25827507 MDR-TB lineage4.1.1.1 None
SRR19304036 Other La3;lineage2.1;lineage4.9;lineage6.3 None
SRR3675568 MDR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3;lineage8 None
ERR8479578 HR-TB lineage1.1.3.1 None
SRR6789626 Other None
ERR4796577 HR-TB None
ERR234659 HR-TB None
ERR752229 Other lineage4.5 None
SRR3675510 Sensitive La3;lineage4.9 None
ERR4819051 Sensitive lineage4.9 None
ERR4818710 Sensitive lineage4.9 None
ERR4769497 Other La1;lineage4.9 None
ERR4808964 RR-TB lineage2.2.1 None
ERR5336148 Other lineage2.1;lineage6.3 None
SRR11342649 MDR-TB lineage4.3.3 None
ERR4817893 Other La3;lineage4.8 None
ERR2514327 HR-TB lineage4.8 None
SRR3675507 RR-TB lineage4.9 None
ERR9786515 Other lineage4.1.2.1 None
SRR11342673 RR-TB lineage4.3.4.2 None
ERR8976043 MDR-TB lineage2.1;lineage2.2;lineage6.3 None
SRR25827687 MDR-TB lineage1.1.2 None
SRR5341330 Other lineage4.9 None
SRR3675549 Other lineage4.9 None
ERR9787139 Other lineage6.3.1 None
SRR6045010 Sensitive lineage4.9 None
SRR1180440 Other lineage4.9 None
SRR10808668 Other lineage2.2.1 None
ERR2693252 HR-TB lineage4.9 None
SRR1180375 Sensitive lineage4.9 None
ERR736874 Other La3;lineage2.1;lineage4.9 None
SRR1173629 Other lineage2.1;lineage4.9 None
SRR12416824 HR-TB lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 None
SRR11972425 Pre-XDR-TB lineage2.2.1 None
ERR3283055 HR-TB lineage4.9 None
ERR9117721 HR-TB La3;lineage1.1.2 None
ERR4188247 HR-TB lineage4.9 None
ERR4817896 HR-TB lineage2.2.1 None
SRR3675558 MDR-TB M.canetti;lineage4.1.1.3;lineage6.3;lineage8 None
ERR926165 Other lineage4.9 None
SRR1181402 Sensitive lineage4.9 None
ERR124642 MDR-TB M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 None
ERR702406 Other lineage2.1 None
ERR926156 Other lineage4.9 None
ERR4872322 Pre-XDR-TB lineage2.2.1 None
SRR12142339 HR-TB lineage2.2.1 None
ERR926162 Sensitive lineage4.9 None
SRR11342642 MDR-TB lineage4.1.1.1 None
SRR3675214 Other lineage4.9 None
ERR736848 Other lineage4.9 None
SRR5341365 Pre-XDR-TB lineage3 None
SRR14782539 MDR-TB lineage4.2.1 None
SRR3675545 RR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR1184312 Other lineage2.2.1 None
ERR4818851 RR-TB lineage4.4.1.1 None
SRR12708407 HR-TB lineage4.3.2.1 None
SRR3675465 Other lineage4.9;lineage6.3 None
SRR5341333 HR-TB lineage2.1;lineage4.9 None
SRR3675506 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR25827497 XDR-TB lineage2.2.1;lineage3 None
SRR1173778 Other lineage4.9 None
SRR3675232 Other lineage4.1.2.1 None
ERR2027263 Other lineage4 None
SRR10315751 MDR-TB lineage4.8 None
SRR6045002 RR-TB lineage4.9 None
ERR978765 RR-TB lineage4.8 None
ERR4798823 HR-TB lineage4 None
ERR3445504 Other lineage4.9;lineage6.1.3 None
SRR11342660 MDR-TB lineage2.2.1 None
ERR3804169 HR-TB lineage4.1.3 None
SAMN02380990 MDR-TB lineage4.6.1.2 None
ERR9119733 MDR-TB lineage2.2.1 None
SRR1915481 Other La1.2.BCG;lineage4.9 None
ERR1063846 HR-TB lineage4.9 None
SRR9970981 RR-TB lineage4.3.2.1 None
SRR7496472 Other lineage4.9 None
ERR4820854 Other lineage4.1.2.1 None
ERR4814639 HR-TB lineage4.9 None
ERR176793 Other lineage4.1.1.1 None
ERR2446566 Other lineage4.9 None
ERR4815079 RR-TB lineage3 None
SRR3675467 Other lineage2.1;lineage4.9;lineage6.3 None
ERR4815471 HR-TB lineage4.9 None
SRR12708413 HR-TB lineage4.1.1.3 None
SRR14801759 MDR-TB La1.7;lineage4.9 None
ERR4769474 HR-TB lineage4.9 None
SRR1183054 Sensitive lineage4.9 None
SRR1165699 Other lineage4.9 None
ERR978767 RR-TB lineage4.8 None
SRR14802079 MDR-TB lineage4.2.1 None
ERR11465626 Sensitive lineage4.3.4.2.1 None
SRR10808399 Sensitive lineage4.9 None
SRR9971112 HR-TB lineage2.2.1 None
ERR3283014 Other La3;lineage4.9 None
ERR978766 RR-TB lineage4.8 None
ERR4814352 Other lineage2.2.1 None
SRR1173281 Other lineage3 None
ERR3797064 Other La3;lineage4.9 None
ERR4819462 Sensitive lineage4.9 None
ERR6359069 HR-TB lineage4.9 None
SRR6046299 Other lineage4.3.1;lineage4.9;lineage6 None
ERR4819781 Other lineage2.2.1 None
SRR6458423 HR-TB lineage2.2.1 None
SRR6044790 Other lineage2.1;lineage4.9 None
SRR3675450 MDR-TB La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
SRR12708392 Other lineage2.2.1 None
SRR3675494 RR-TB lineage4.9 None
ERR4797054 Pre-XDR-TB lineage2.1 None
ERR5311102 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR6044835 Other lineage4.9 None
ERR736871 HR-TB lineage2.1;lineage4.9;lineage6.3 None
ERR9787165 Other lineage6.1.3 None
ERR3283057 Sensitive La3;lineage4.9 None
ERR5311083 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR5311090 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR6045380 Other lineage2.1;lineage4.9 None
ERR473314 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR473334 HR-TB lineage4.9 None
SRR3675554 MDR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR3283028 Other La3;lineage4 None