EBG00000313325 - n.1479G>A
Drug resistance types
1 Sensitive
32 RR-TB
9 HR-TB
18 MDR-TB
8 Pre-XDR-TB
1 XDR-TB
54 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.3.3 | 5 |
| lineage4.1.1.3.1;lineage3.1.2 | 1 |
| lineage2.2.1 | 12 |
| lineage3 | 7 |
| lineage4.8 | 19 |
| lineage4.1.2 | 2 |
| lineage1.1.3.2 | 1 |
| lineage4.9 | 18 |
| lineage4.6.2.2 | 2 |
| lineage4.9;lineage4.2.1 | 1 |
| lineage1.2.2.2 | 1 |
| lineage4.2.2.2 | 1 |
| lineage4.6 | 2 |
| lineage4.1.1 | 1 |
| lineage4.4.1.2 | 1 |
| lineage4.4.1.1 | 2 |
| lineage4.2.1.1 | 1 |
| La1.8.1 | 7 |
| lineage4.1.2.1 | 1 |
| lineage4.2.1 | 2 |
| lineage4.1.1.3 | 6 |
| lineage4.5;lineage2.2.1 | 1 |
| lineage4.9;La1.8.1 | 1 |
| lineage4.9;La1.3 | 1 |
| lineage4.6.5 | 2 |
| lineage4 | 6 |
| 2 | |
| lineage4.7 | 1 |
| lineage4.1.1.2 | 1 |
| lineage4.8;lineage4.3.3 | 4 |
| lineage3.1.1 | 1 |
| lineage4.4.2 | 2 |
| lineage4.3.4.1 | 1 |
| La1.7.1 | 2 |
| lineage2.2 | 2 |
| lineage2.2.1.1 | 1 |
| lineage4.3.4.2.1 | 1 |
| lineage4.5 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 123 |
Geographic prevalence
Country level data for this variant is available for 7 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR4818583 | Other | lineage4.3.3 | None | ERR2514430 | Other | lineage4.1.1.3.1;lineage3.1.2 | None | ERR4820369 | Other | lineage2.2.1 | None | ERR2514305 | Other | lineage3 | None | SAMEA3501067 | RR-TB | lineage4.8 | None | ERR270777 | HR-TB | lineage4.1.2 | None | SAMEA3501052 | RR-TB | lineage4.8 | None | ERR2514801 | Other | lineage1.1.3.2 | gb | SAMEA3501070 | RR-TB | lineage4.8 | None | SAMEA3501046 | RR-TB | lineage4.8 | None | ERR4821974 | Other | lineage3 | None | ERR4821276 | Other | lineage3 | None | SRR6045002 | MDR-TB | lineage4.9 | None | ERR4821318 | HR-TB | lineage4.6.2.2 | gb | ERR4821747 | MDR-TB | lineage4.9;lineage4.2.1 | None | SRR6045635 | Other | lineage1.2.2.2 | gb | SRR5818586 | RR-TB | lineage4.2.2.2 | None | ERR4828805 | Other | lineage4.6 | None | SRR6152980 | HR-TB | lineage4.8 | ca | ERR4828879 | MDR-TB | lineage3 | None | ERR4828811 | Other | lineage4.1.1 | None | SRR6046907 | Other | lineage4.9 | None | SRR7131296 | Other | lineage4.3.3 | None | SRR6397733 | Other | lineage4.4.1.2 | None | SRR6397815 | Other | lineage4.4.1.1 | None | ERR4872322 | Pre-XDR-TB | lineage2.2.1 | None | SRR6785281 | Other | lineage4.2.1.1 | None | ERR5087486 | Other | La1.8.1 | None | ERR5087596 | Other | La1.8.1 | None | ERR5087846 | Other | La1.8.1 | None | SRR7765062 | Pre-XDR-TB | lineage4.1.2.1 | None | SRR8600288 | Other | La1.8.1 | None | SRR8649119 | Other | lineage4.6 | None | SRR9971080 | RR-TB | lineage2.2.1 | None | ERR10762248 | MDR-TB | lineage4.2.1 | None | ERR019855 | Other | lineage3 | None | ERR1034647 | MDR-TB | lineage4.1.1.3 | None | DRR034348 | Other | lineage2.2.1 | None | DRR184982 | RR-TB | lineage2.2.1 | None | ERR017781 | Other | lineage3 | None | ERR036207 | Other | lineage4.9 | None | ERR3439489 | RR-TB | La1.8.1 | None | ERR10762495 | MDR-TB | lineage2.2.1 | None | ERR3439265 | Other | lineage4.9 | None | ERR4187652 | Other | lineage4.9 | None | ERR4811035 | Pre-XDR-TB | lineage4.5;lineage2.2.1 | None | ERR4187671 | Other | lineage4.9;La1.8.1 | None | ERR4769502 | RR-TB | lineage4.9;La1.3 | None | ERR4769553 | RR-TB | lineage4.9 | None | ERR4799462 | Sensitive | lineage3 | in | ERR7801175 | RR-TB | lineage4.6.5 | None | ERR4811708 | HR-TB | lineage4 | None | ERR5917985 | MDR-TB | lineage2.2.1 | None | ERR736816 | Other | lineage4.9 | None | ERR6358979 | Other | None | ERR987707 | MDR-TB | lineage4.7 | None | ERR7801176 | RR-TB | lineage4.6.5 | None | ERR8975044 | Other | lineage4.1.1.2 | None | ERR970449 | RR-TB | lineage4.1.1.3 | None | ERR9786164 | RR-TB | lineage4.1.1.3 | None | SRR1049676 | MDR-TB | lineage4.8;lineage4.3.3 | None | ERR9992879 | XDR-TB | lineage4.3.3 | None | SRR1049677 | MDR-TB | lineage4.8;lineage4.3.3 | None | SRR023450 | RR-TB | lineage2.2.1 | None | SRR023487 | RR-TB | lineage2.2.1 | None | SRR1175473 | Other | lineage4.9 | None | SRR1140574 | MDR-TB | lineage4.8;lineage4.3.3 | None | SRR1173185 | HR-TB | lineage4.9 | None | SRR1173450 | RR-TB | lineage4.9 | None | SRR1062920 | MDR-TB | lineage4.8;lineage4.3.3 | None | SRR1173421 | RR-TB | lineage4.9 | None | SRR1173833 | Other | lineage4.9 | None | SRR1175474 | HR-TB | lineage4.9 | None | SRR1175472 | MDR-TB | lineage4 | None | SRR1175491 | MDR-TB | lineage4 | None | SRR14801720 | RR-TB | lineage4.8 | None | SRR11972425 | Pre-XDR-TB | lineage2.2.1 | None | SRR1184329 | MDR-TB | lineage4.9 | None | SRR1196478 | MDR-TB | lineage4.9 | None | SRR12634609 | MDR-TB | lineage3.1.1 | None | SRR13423546 | Other | lineage4.4.2 | None | SRR15316595 | RR-TB | lineage4.4.2 | None | SRR15508556 | Other | lineage4.3.4.1 | None | SRR2100877 | HR-TB | lineage4.1.2 | None | SRR1792022 | Other | La1.8.1 | None | SRR1792011 | Other | La1.8.1 | None | SRR21469200 | Other | La1.7.1 | None | SRR3619764 | Pre-XDR-TB | lineage2.2 | None | SRR21469201 | Other | La1.7.1 | None | SRR5485415 | RR-TB | None | SRR3601585 | Pre-XDR-TB | lineage2.2 | None | SRR3619841 | Pre-XDR-TB | lineage2.2.1 | None | SRR22424851 | MDR-TB | lineage4.3.3 | None | SAMEA3501065 | RR-TB | lineage4.8 | None | SRR3675219 | Other | lineage4.9 | None | SRR3618864 | Pre-XDR-TB | lineage2.2.1 | None | ERR1750889 | Other | lineage4.4.1.1 | None | ERR1750916 | Other | lineage2.2.1.1 | None | ERR4815957 | HR-TB | lineage4.2.1 | None | ERR2228965 | Other | lineage4.8 | None | SAMEA3501015 | Other | lineage4.8 | None | ERR2229147 | Other | lineage4.8 | None | ERR212114 | Other | lineage4.3.4.2.1 | None | ERR4816755 | Other | lineage4.1.1.3 | None | ERR4817204 | RR-TB | lineage4.9 | None | ERR4816702 | RR-TB | lineage4.6.2.2 | None | ERR2229801 | Other | lineage4 | None | ERR2229436 | Other | lineage4.8 | None | ERR2229435 | HR-TB | lineage4.8 | None | ERR2228900 | RR-TB | lineage4.8 | None | ERR2228838 | RR-TB | lineage4.8 | None | ERR2228890 | Other | lineage4 | None | ERR2228810 | RR-TB | lineage4 | None | ERR2228815 | RR-TB | lineage4.8 | None | ERR2228899 | RR-TB | lineage4.8 | None | ERR4815816 | Other | lineage4.5 | gb | ERR2228910 | Other | lineage4.8 | None | ERR4817915 | RR-TB | lineage4.9 | None | ERR2513382 | RR-TB | lineage4.1.1.3 | None | ERR2512423 | Other | lineage4.1.1.3 | None | SAMEA3501063 | RR-TB | lineage4.8 | None | ERR2512689 | Other | lineage4.3.3 | gb | SAMEA3450033 | Other | lineage4.8 | None |
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