EBG00000313325 - n.1484G>T
Drug resistance types
0 Sensitive
85 RR-TB
22 HR-TB
102 MDR-TB
105 Pre-XDR-TB
23 XDR-TB
260 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage2.2;lineage4 | 1 |
| lineage2.2.1 | 147 |
| lineage4.3.4.1 | 5 |
| lineage3 | 34 |
| lineage4.8 | 82 |
| lineage4.7 | 4 |
| lineage4.3.4.2 | 10 |
| lineage4.3.4.2.1 | 10 |
| lineage6.1.2 | 1 |
| lineage4.6.1.2 | 5 |
| La1.8.1 | 7 |
| lineage4.3.3 | 15 |
| lineage4.8;lineage4.9 | 1 |
| lineage4.9 | 72 |
| lineage4.3.4.1;lineage4.9 | 1 |
| La1.3 | 1 |
| lineage3.1.1;lineage4.9 | 1 |
| lineage3.1.2;lineage4.1.1.3.1 | 1 |
| lineage4.3 | 2 |
| lineage4.4.1.1 | 9 |
| lineage4.1.1.3 | 22 |
| lineage4.6.2.2 | 2 |
| lineage4.4.1.2 | 2 |
| lineage4.1.1 | 2 |
| lineage4.1.2.1 | 23 |
| lineage4.1.1.1 | 3 |
| lineage4.9.1 | 1 |
| lineage2.2.1.1 | 10 |
| La1.7;M.canetti;lineage4.9 | 1 |
| lineage3.1.3 | 1 |
| lineage4.2.1.1 | 3 |
| lineage4.2.1 | 13 |
| lineage4.1.2 | 3 |
| lineage4.4 | 1 |
| lineage4 | 3 |
| La2 | 1 |
| La1.7.1 | 2 |
| lineage1.1.3.3 | 1 |
| lineage4.3.2 | 3 |
| lineage4.3.2.1 | 3 |
| lineage4.2.2.2 | 7 |
| lineage1.2.2.2 | 2 |
| lineage1.1.1 | 2 |
| lineage3.1.2 | 1 |
| lineage4.3.4.2;lineage4.9 | 1 |
| lineage1.1.1.1 | 2 |
| lineage4.4.1.1.1 | 1 |
| lineage3.1.1 | 5 |
| lineage4.3.3;lineage4.4.1.1 | 2 |
| lineage4.1.2.1;lineage4.9 | 2 |
| lineage5.1.1 | 2 |
| lineage2.1 | 4 |
| 1 | |
| lineage4.5 | 2 |
| lineage3.1.2.1 | 2 |
| lineage2.2.2 | 9 |
| La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | 1 |
| lineage2.2.1;lineage4.5 | 1 |
| lineage3.1.2.1;lineage4.9 | 1 |
| lineage2.2.1;lineage3.1.2.1 | 1 |
| lineage2.2.1;lineage4.2.1 | 1 |
| lineage4.3.3;lineage4.8 | 4 |
| lineage4.6.5 | 3 |
| lineage4.6.1.1 | 1 |
| lineage3;lineage4 | 1 |
| lineage4.2.2 | 1 |
| lineage4.1.1.2 | 1 |
| lineage2;lineage4 | 1 |
| lineage4.1.1.3.1 | 3 |
| lineage4.4.2 | 5 |
| lineage4.1;lineage4.9 | 1 |
| La3 | 1 |
| lineage4.1.3 | 1 |
| lineage4.8.1 | 2 |
| lineage2.2.1;lineage4.9 | 1 |
| lineage4.8.2 | 1 |
| lineage4.3.4.2;lineage4.7 | 1 |
| lineage2.2.1;lineage2.2.2 | 1 |
| lineage4.1.2.1;lineage4.4.1.1 | 1 |
| lineage4.1.2.1;lineage4.4.1 | 1 |
| M.canetti;lineage2.1;lineage4.9;lineage6.3 | 1 |
| lineage4.1.1.3.1;lineage4.9 | 1 |
| La1.6 | 1 |
| lineage1.2.1.1 | 1 |
| lineage2.2.1;lineage4 | 1 |
| lineage3.1.2.2 | 1 |
| lineage3;lineage4.9 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 597 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR16156832 | RR-TB | lineage2.2;lineage4 | None | SRR13232459 | Pre-XDR-TB | lineage2.2.1 | None | ERR10796618 | Other | lineage4.3.4.1 | None | ERR4828879 | HR-TB | lineage3 | None | ERR2446509 | Other | lineage3 | nl | ERR978761_ERR978762_ERR978760 | RR-TB | lineage4.8 | None | ERR987707 | MDR-TB | lineage4.7 | None | SRR7131230 | HR-TB | lineage4.3.4.2 | None | SRR29274217 | Pre-XDR-TB | lineage4.8 | None | ERR978750_ERR978752_ERR978751 | RR-TB | lineage4.8 | None | SRR18002937 | Other | lineage2.2.1 | None | SRR5818647 | Other | lineage4.3.4.2.1 | None | SRR19304094 | Other | lineage6.1.2 | None | SRR1062880 | MDR-TB | lineage4.6.1.2 | None | ERR5087596 | Other | La1.8.1 | None | SRR6982141 | Other | lineage4.3.3 | None | ERR2228890 | Other | lineage4.8;lineage4.9 | None | ERR2229204 | Other | lineage4.8 | None | SRR3675582 | Other | lineage4.9 | None | ERR10796572 | Other | lineage4.3.4.1;lineage4.9 | None | SRR16157123 | Other | lineage4.9 | None | ERR3132179 | Pre-XDR-TB | lineage2.2.1 | None | ERR502478 | RR-TB | lineage4.9 | None | SRR18002903 | Pre-XDR-TB | lineage2.2.1 | None | ERR1036294 | Pre-XDR-TB | lineage4.3.4.2 | pt | ERR4769436 | Other | La1.3 | None | ERR171142 | Other | lineage3.1.1;lineage4.9 | None | ERR5987263 | MDR-TB | lineage2.2.1 | None | SRR5485571 | RR-TB | lineage4.9 | None | ERR2514430 | Other | lineage3.1.2;lineage4.1.1.3.1 | None | ERR10796593 | Other | lineage4.3 | None | SRR11342698 | RR-TB | lineage4.4.1.1 | None | SRR18002881 | Pre-XDR-TB | lineage2.2.1 | None | SRR18002909 | MDR-TB | lineage2.2.1 | None | ERR2229366 | Other | lineage4.8 | None | SRR11342685 | HR-TB | lineage4.4.1.1 | None | SRR1173876 | Pre-XDR-TB | lineage4.1.1.3 | None | ERR2228900 | Other | lineage4.8 | None | ERR867522 | Pre-XDR-TB | lineage2.2.1 | None | SRR7069648 | Other | lineage4.6.2.2 | None | ERR126597 | HR-TB | lineage4.4.1.2 | None | ERR4276875 | MDR-TB | lineage4.8 | None | ERR5866201 | Pre-XDR-TB | lineage2.2.1 | None | SRR13870369 | Pre-XDR-TB | lineage4.1.1 | None | SRR14801720 | Other | lineage4.8 | None | SRR7131182 | Other | lineage4.1.2.1 | None | ERR5866492 | Pre-XDR-TB | lineage4.1.2.1 | None | SRR6045944 | Other | lineage4.1.2.1 | None | SRR8758877 | MDR-TB | lineage4.1.1.1 | None | ERR037504 | Other | lineage4.9.1 | None | ERR4972530 | Pre-XDR-TB | lineage4.3.3 | None | SRR1792022 | Other | La1.8.1 | None | SRR1173185 | Other | lineage4.9 | None | SAMN02403532 | Pre-XDR-TB | lineage4.1.1.3 | za | ERR4799634 | XDR-TB | lineage2.2.1.1 | in | ERR867571 | Other | lineage4.9 | None | SRR9971112 | Other | lineage2.2.1 | None | SRR1181130 | Other | lineage4.1.1.3 | None | SRR6045384 | Other | lineage4.1.2.1 | None | SRR6045887 | Other | La1.7;M.canetti;lineage4.9 | None | SRR13232476 | MDR-TB | lineage2.2.1 | None | SRR17657952 | Pre-XDR-TB | lineage2.2.1 | None | SAMEA3501052 | RR-TB | lineage4.8 | None | SRR19303899 | Other | lineage3 | None | ERR10796577 | Other | lineage4.9 | None | SAMEA3501046 | RR-TB | lineage4.8 | None | SRR7070144 | Other | lineage4.8 | None | SRR1159810 | Pre-XDR-TB | lineage4.3.3 | None | SRR7131275 | Other | lineage4.1.2.1 | None | ERR4817109 | Other | lineage3 | None | ERR8665706 | Pre-XDR-TB | lineage2.2.1 | None | SRR1173407 | MDR-TB | lineage4.1.1.3 | None | SRR1173281 | Other | lineage3 | None | SRR18003024 | RR-TB | lineage2.2.1 | None | SRR1181256 | Other | lineage4.9 | None | SRR10869071 | MDR-TB | lineage2.2.1 | None | SRR3601585 | Pre-XDR-TB | lineage2.2.1 | None | SRR22175172 | XDR-TB | lineage2.2.1 | None | SRR6045613 | Other | lineage3.1.3 | None | ERR4817434 | Other | lineage3 | None | SRR7755645 | Pre-XDR-TB | lineage2.2.1 | None | SRR5486892 | Pre-XDR-TB | lineage4.8 | None | SRR7070521 | Other | lineage4.2.1.1 | None | ERR2228838 | Other | lineage4.8 | None | SRR7755688 | Pre-XDR-TB | lineage4.2.1 | None | ERR978762 | Other | lineage4.8 | None | SRR18002976 | Other | lineage2.2.1 | None | SAMEA3501065 | RR-TB | lineage4.8 | None | SRR11342691 | MDR-TB | lineage2.2.1 | None | ERR270777 | HR-TB | lineage4.1.2 | None | SRR16627752 | RR-TB | lineage4.4 | None | ERR4811708 | HR-TB | lineage4 | None | SRR5526915 | Pre-XDR-TB | lineage2.2.1.1 | pg | SRR11972417 | MDR-TB | lineage2.2.1 | None | ERR970449 | RR-TB | lineage4.1.1.3 | None | SRR19303818 | Other | lineage4.3.4.2 | None | SRR6485038 | MDR-TB | lineage2.2.1 | None | SRR3675389 | Other | lineage4.9 | None | SRR11342660 | MDR-TB | lineage2.2.1 | None | ERR502479 | RR-TB | lineage4.9 | None | SRR12420476 | Pre-XDR-TB | lineage2.2.1 | None | SRR19304104 | Other | lineage4.8 | None | ERR5087846 | Other | La1.8.1 | None | ERR13266717 | Pre-XDR-TB | lineage2.2.1 | None | SRR13888750 | Other | La2 | None | SRR21469201 | Other | La1.7.1 | None | SRR7645901 | MDR-TB | lineage2.2.1 | None | ERR4798769 | Other | lineage1.1.3.3 | None | ERR4972567 | MDR-TB | lineage4.3.2 | None | SRR10315567 | HR-TB | lineage2.2.1 | None | ERR2512423 | Other | lineage4.1.1.3 | None | ERR911930 | Other | lineage4.8 | None | ERR502473 | RR-TB | lineage4.9 | None | SRR9970981 | RR-TB | lineage4.3.2.1 | None | SRR11342688 | Other | lineage4.2.2.2 | None | SRR6044841 | Other | lineage4.9 | None | SRR12708411 | HR-TB | lineage1.2.2.2 | None | SRR18002945 | Other | lineage2.2.1 | None | ERR978760 | RR-TB | lineage4.8 | None | SRR1049581 | MDR-TB | lineage4.6.1.2 | None | SRR1173456 | Pre-XDR-TB | lineage4.1.1.3 | None | SAMN02419563 | Pre-XDR-TB | lineage4.3.3 | by | SRR18003047 | MDR-TB | lineage2.2.1 | None | SRR5818586 | RR-TB | lineage4.2.2.2 | None | ERR117618 | Pre-XDR-TB | lineage1.1.1 | None | SRR18002948 | Other | lineage2.2.1 | None | SRR18002967 | HR-TB | lineage2.2.1 | None | ERR4811294 | XDR-TB | lineage2.2.1 | cn | SRR6046802 | Other | lineage4.9 | None | ERR11465301 | Other | lineage4.3.4.2.1 | None | SRR18003012 | Pre-XDR-TB | lineage2.2.1 | None | SRR21747027 | Pre-XDR-TB | lineage2.2.1 | None | SRR29772561 | Pre-XDR-TB | lineage2.2.1 | None | ERR2653132 | Pre-XDR-TB | lineage4.8 | None | SRR6046177 | Other | lineage3.1.2 | None | SRR6046359 | Other | lineage4.7 | None | ERR867541 | MDR-TB | lineage4.2.1 | None | DRR184629 | Other | lineage2.2.1 | None | SRR7069137 | Other | lineage4.8 | None | ERR4827684 | MDR-TB | lineage2.2.1 | None | SRR7069251 | Other | lineage3 | None | ERR9117788 | Other | lineage3 | None | ERR8665707 | Pre-XDR-TB | lineage2.2.1 | None | ERR13266820 | XDR-TB | lineage3 | None | SRR5485510 | RR-TB | lineage4.9 | None | SRR18003049 | Other | lineage2.2.1 | None | ERR4797521 | XDR-TB | lineage2.2.1 | in | ERR2600422 | MDR-TB | lineage2.2.1 | None | ERR978747 | Other | lineage4.8 | None | SAMN02380982 | MDR-TB | lineage4.3.4.2.1 | None | SRR29538959 | Pre-XDR-TB | lineage2.2.1 | None | ERR10796631 | Other | lineage4.3.4.2;lineage4.9 | None | DRR185000 | Other | lineage1.1.1.1 | None | SRR11342644 | MDR-TB | lineage4.4.1.1.1 | None | ERR9285979 | RR-TB | lineage3.1.1 | None | SRR11342634 | MDR-TB | lineage4.8 | None | ERR10796568 | Other | lineage4.9 | None | SRR16156697 | RR-TB | lineage2.2.1 | None | SRR18002964 | Other | lineage2.2.1 | None | SRR7070154 | Other | lineage4.4.1.1 | None | SRR1184329 | Other | lineage4.9 | None | ERR10796553 | Other | lineage4.9 | None | SRR9971113 | Other | lineage2.2.1 | None | ERR752012 | HR-TB | lineage1.1.1.1 | None | SRR5153825 | Pre-XDR-TB | lineage2.2.1 | None | ERR4972534 | XDR-TB | lineage4.3.3;lineage4.4.1.1 | None | SRR18002999 | Pre-XDR-TB | lineage2.2.1 | None | ERR978746 | RR-TB | lineage4.8 | None | ERR4276876 | MDR-TB | lineage4.8 | None | ERR9786164 | RR-TB | lineage4.1.1.3 | None | ERR978735 | Other | lineage4.8 | None | SRR1062928 | Other | lineage4.1.2.1;lineage4.9 | None | SRR9971080 | RR-TB | lineage2.2.1 | None | ERR2228965 | Other | lineage4.8 | None | ERR502517 | Other | lineage5.1.1 | None | ERR9992879 | XDR-TB | lineage4.3.3 | None | SRR5485522 | RR-TB | lineage4.9 | None | ERR5866491 | Pre-XDR-TB | lineage4.1.2.1 | None | SRR5153087 | Pre-XDR-TB | lineage2.2.1 | None | SRR7069074 | Other | lineage3 | None | SRR1173450 | Other | lineage4.9 | None | ERR10796598 | Other | lineage4.9 | None | SRR1062871 | RR-TB | lineage4.3.4.2.1 | None | SRR1196478 | Other | lineage4.9 | None | SRR25827366 | XDR-TB | lineage2.2.1 | None | ERR867525 | Pre-XDR-TB | lineage2.2.1 | None | ERR212114 | Other | lineage4.3.4.2.1 | None | ERR3283006 | RR-TB | lineage4.9 | None | ERR1034647 | MDR-TB | lineage4.1.1.3 | None | SRR9971168 | Other | lineage4.3.2.1 | None | SRR1792011 | Other | La1.8.1 | None | SRR6384967 | Pre-XDR-TB | lineage2.2.1 | None | ERR10796566 | Other | lineage4.9 | None | ERR5865315 | Pre-XDR-TB | lineage2.2.1 | None | ERR978754 | RR-TB | lineage4.8 | None | ERR5979454 | Pre-XDR-TB | lineage3 | None | SRR30180343 | MDR-TB | lineage2.1 | None | SAMEA3501070 | RR-TB | lineage4.8 | None | SRR18002987 | Other | lineage2.2.1 | None | SRR21001883 | XDR-TB | lineage2.2.1 | None | ERR10796636 | Other | lineage4.1.2.1 | None | ERR1036296 | Pre-XDR-TB | lineage4.3.4.2 | pt | SRR18003023 | Other | lineage2.2.1 | None | ERR10762297 | MDR-TB | lineage4.2.1 | None | SAMEA3501067 | RR-TB | lineage4.8 | None | SRR1049582 | MDR-TB | lineage4.6.1.2 | None | SRR25207218 | MDR-TB | lineage2.2.1 | None | SRR5818684 | Other | lineage4.2.2.2 | None | ERR4817069 | RR-TB | None | SRR7070134 | Other | lineage3.1.1 | None | SRR7585400 | MDR-TB | lineage3 | None | SRR7645971 | Other | lineage2.2.1 | None | SRR7655982 | Pre-XDR-TB | lineage2.2.1 | None | SRR28351634 | XDR-TB | lineage4.2.1 | None | ERR1034582 | Pre-XDR-TB | lineage3 | pk | SRR1175491 | MDR-TB | lineage4.3.4.1 | None | SRR9971046 | MDR-TB | lineage4.8 | None | SRR9971122 | MDR-TB | lineage4.8 | None | SRR1049559 | MDR-TB | lineage4.3.4.2.1 | None | SRR1173770 | Other | lineage4.9 | None | SRR11342646 | HR-TB | lineage3 | None | SRR7755649 | MDR-TB | lineage4.2.1 | None | ERR10796555 | Other | lineage4.1.2.1 | None | ERR978734 | RR-TB | lineage4.8 | None | SRR12062533 | Pre-XDR-TB | lineage2.2.1.1 | None | SRR1165209 | MDR-TB | lineage4.1.1.3 | None | SRR18003045 | Other | lineage2.2.1 | None | SRR19303907 | Other | lineage4.8 | None | ERR4830757 | RR-TB | lineage4.5 | ir | ERR11465562 | Other | lineage4.1.2.1 | None | ERR10796627 | Other | lineage4.1.2.1;lineage4.9 | None | ERR978727 | Other | lineage4.8 | None | SRR023487 | RR-TB | lineage2.2.1 | None | SRR1140736 | Other | lineage4.1.2.1 | None | ERR4817915 | Other | lineage4.9 | None | SRR7069097 | Other | lineage3.1.2.1 | None | SRR18003030 | Pre-XDR-TB | lineage2.2.1 | None | ERR2229733 | Other | lineage4.8 | dk | SRR7765062 | Pre-XDR-TB | lineage4.1.2.1 | None | SRR7131149 | Pre-XDR-TB | lineage4.8 | None | SRR1049672 | Other | lineage3 | None | SRR10303325 | MDR-TB | lineage2.2.1 | None | SRR18002963 | Other | lineage2.2.1 | None | ERR10796620 | Other | lineage4.1.1.1 | None | SRR6045603 | Other | lineage4.1.1.3 | None | SRR7131147 | Other | lineage4.1.2.1 | None | SRR7645927 | Other | lineage4.8 | None | ERR5758317 | Pre-XDR-TB | lineage2.2.2 | None | SRR16156751 | Other | lineage4.9 | None | ERR867567 | RR-TB | lineage3 | None | SRR18002984 | MDR-TB | lineage2.2.2 | None | SRR11342651 | MDR-TB | lineage4.1.1.1 | None | SRR10315751 | MDR-TB | lineage4.8 | None | ERR978748 | Other | lineage4.8 | None | ERR978755_ERR978756_ERR978754_ERR978757 | RR-TB | lineage4.8 | None | SRR28498452 | XDR-TB | lineage4.2.1 | None | SRR5485526 | RR-TB | lineage4.9 | None | SRR6045516 | Other | lineage3.1.1 | None | SRR6046020 | Other | lineage3 | None | SRR6046482 | Other | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | None | ERR13290738 | MDR-TB | lineage2.1 | None | ERR978693 | Other | lineage4.8 | None | ERR3468613 | Other | La1.8.1 | None | ERR4820723 | Other | lineage4.4.1.1 | None | SRR10147708 | RR-TB | lineage4.5 | None | SAMN02380990 | MDR-TB | lineage4.6.1.2 | None | SRR14807667 | XDR-TB | lineage2.2.1 | None | ERR4811035 | Pre-XDR-TB | lineage2.2.1;lineage4.5 | None | ERR2027290 | Other | lineage3.1.2.1;lineage4.9 | None | SRR6046484 | Other | lineage1.2.2.2 | None | ERR867540 | MDR-TB | lineage2.2.1 | None | SRR6789624 | HR-TB | lineage4.1.1.3 | None | ERR4818583 | Other | lineage4.3.3 | None | ERR867572 | Other | lineage4.9 | None | SAMEA3450033 | Other | lineage4.8 | None | SRR18003027 | Other | lineage2.2.1 | None | SRR7070329 | Other | lineage3 | None | SRR18003046 | MDR-TB | lineage2.2.1 | None | ERR5865314 | Pre-XDR-TB | lineage2.2.1 | None | SRR16370485 | Pre-XDR-TB | lineage2.2.1 | None | ERR11465563 | Other | lineage4.1.2.1 | None | SRR3675509 | Other | lineage4.9 | None | SRR18714846 | Pre-XDR-TB | lineage2.2.1 | None | SRR25207217 | Pre-XDR-TB | lineage2.2.1 | None | ERR10796596 | Other | lineage4.9 | None | ERR4797884 | XDR-TB | lineage2.2.1;lineage3.1.2.1 | in | SRR12062542 | Pre-XDR-TB | lineage2.2.1 | None | ERR3283032 | Other | lineage4.9 | None | SRR6397815 | Other | lineage4.4.1.1 | None | SRR6046376 | Other | lineage3 | None | SRR7131145 | Other | lineage4.1.2.1 | None | ERR2229541 | Other | lineage4.8 | None | SRR7755652 | Pre-XDR-TB | lineage2.2.1;lineage4.2.1 | None | SRR1062920 | MDR-TB | lineage4.3.3;lineage4.8 | None | ERR1034852 | Pre-XDR-TB | lineage4.3.4.2 | pt | ERR4798248 | MDR-TB | lineage2.2.1.1 | in | ERR047880 | MDR-TB | lineage1.1.1 | ru | ERR5311077 | Other | La1.8.1 | None | SRR19303815 | Other | lineage4.8 | None | SRR11349203 | MDR-TB | lineage4.4.1.1 | None | SRR6046848 | Other | lineage4.6.5 | None | SRR7535047 | RR-TB | lineage4.6.1.1 | None | ERR2228899 | Other | lineage4.8 | None | ERR3468488 | Other | La1.8.1 | None | ERR3797062 | RR-TB | lineage4.9 | None | ERR1023509 | Other | lineage4.9 | None | ERR9119120 | Other | lineage4.8 | None | ERR867566 | Other | lineage4.9 | None | DRR185024 | Other | lineage2.2.2 | None | ERR3283043 | Other | lineage4.9 | None | SRR3619841 | Pre-XDR-TB | lineage2.2.1 | None | SRR5485603 | Other | lineage4.9 | None | SRR18002935 | Pre-XDR-TB | lineage2.2.1 | None | SRR1173740 | Other | lineage3;lineage4 | None | ERR10762248 | MDR-TB | lineage4.2.1 | None | SRR29093763 | Pre-XDR-TB | lineage2.2.1 | None | SRR1175473 | Other | lineage4.9 | None | ERR911929 | Other | lineage4.8 | None | SRR18002875 | MDR-TB | lineage2.2.2 | None | SRR18002994 | MDR-TB | lineage4.2.2 | None | SRR5485511 | RR-TB | lineage4.9 | None | SRR18002980 | Other | lineage2.2.1 | None | SRR5485485 | RR-TB | lineage4.9 | None | SRR18003032 | Other | lineage2.2.1 | None | ERR4830549 | MDR-TB | lineage4.1.1.3 | None | SRR11342647 | MDR-TB | lineage4.1.1.3 | None | ERR13290728 | MDR-TB | lineage2.1 | None | ERR978734_ERR978733_ERR978735 | RR-TB | lineage4.8 | None | ERR8975044 | Other | lineage4.1.1.2 | None | ERR9119680 | Pre-XDR-TB | lineage2.2.1 | None | ERR1035260 | XDR-TB | lineage4.1.2.1 | br | ERR502470 | RR-TB | lineage4.9 | None | SRR3743202 | Pre-XDR-TB | lineage4.8 | None | ERR2229147 | Other | lineage4.8 | None | ERR978726_ERR978727 | RR-TB | lineage4.8 | None | ERR1023502 | MDR-TB | lineage2;lineage4 | None | SRR7645972 | MDR-TB | lineage4.2.1 | None | SRR7653023 | Pre-XDR-TB | lineage2.2.1 | None | SRR6785281 | Other | lineage4.2.1.1 | None | SRR18002998 | Pre-XDR-TB | lineage2.2.2 | None | SRR7069027 | MDR-TB | lineage4.3.4.2 | None | SRR15723174 | Pre-XDR-TB | lineage2.2.1 | None | DRR034348 | Other | lineage2.2.1 | None | SRR7131122 | Other | lineage2.2.1 | None | SRR7131195 | Other | lineage2.2.1 | None | SRR1062918 | Other | lineage3 | None | ERR4819863 | RR-TB | lineage4.9 | None | ERR4810998 | Pre-XDR-TB | lineage2.2.1 | cn | SRR6046442 | Other | lineage3 | None | SRR24709933 | XDR-TB | lineage2.2.1 | None | SRR7070157 | Other | lineage4.1.1.3.1 | None | SRR1735598 | RR-TB | lineage4.9 | None | SRR5485525 | RR-TB | lineage4.9 | None | ERR978757 | RR-TB | lineage4.8 | None | SRR11349207 | RR-TB | lineage2.2.1 | None | SAMN02403523 | MDR-TB | lineage4.1.1.3 | za | ERR4796858 | Pre-XDR-TB | lineage4.2.2.2 | in | ERR3283008 | Other | lineage4.9 | None | SRR2024922 | Pre-XDR-TB | lineage2.2.1 | cn | SRR9971333 | MDR-TB | lineage4.1.1.3 | None | ERR10796635 | Other | lineage4.8 | None | ERR5917985 | MDR-TB | lineage2.2.1 | None | ERR5979407 | Other | lineage3 | None | SRR13423546 | Other | lineage4.4.2 | None | SRR5341365 | Pre-XDR-TB | lineage3 | None | ERR10796629 | Other | lineage4.1;lineage4.9 | None | ERR5865312 | Pre-XDR-TB | lineage2.2.1 | None | SRR10321138 | Other | La3 | None | SRR11342671 | RR-TB | lineage4.1.3 | None | SRR11342673 | RR-TB | lineage4.3.4.2 | None | SRR17567917 | RR-TB | lineage4.4.1.1 | None | SRR18003002 | MDR-TB | lineage2.2.1 | None | ERR4972500 | Pre-XDR-TB | lineage4.3.3 | None | ERR978694 | Other | lineage4.8 | None | ERR8976117 | Pre-XDR-TB | lineage2.2.2 | None | ERR4809359 | Pre-XDR-TB | lineage2.2.2 | None | ERR2513405 | Other | lineage2.2.1 | None | SRR6044952 | Other | lineage4.9 | None | SRR6045002 | RR-TB | lineage4.9 | None | SRR6045909 | Other | lineage4.8.1 | None | SRR12708406 | HR-TB | lineage2.2.1;lineage4.9 | None | SRR22424778 | RR-TB | lineage2.2.1.1 | None | SRR7131287 | Other | lineage2.2.1.1 | None | SRR7646018 | MDR-TB | lineage4.2.1 | None | ERR3275190 | Other | lineage3 | nl | ERR978751 | Other | lineage4.8 | None | ERR10762495 | MDR-TB | lineage2.2.1 | None | SRR1049674 | HR-TB | lineage2.2.1 | None | ERR5865313 | Pre-XDR-TB | lineage2.2.1 | None | SRR7645906 | Other | lineage2.2.1 | None | SRR9971114 | Other | lineage2.2.1 | None | SRR7068941 | Other | lineage4.8.2 | None | SRR5485513 | RR-TB | lineage4.9 | None | ERR978755 | RR-TB | lineage4.8 | None | SRR25206953 | XDR-TB | lineage2.2.1 | None | SRR11342640 | MDR-TB | lineage4.3.3 | None | SRR11342649 | MDR-TB | lineage4.3.3 | None | ERR4809333 | Pre-XDR-TB | lineage2.2.2 | None | ERR4815121 | HR-TB | lineage4.6.2.2 | None | SRR18003013 | Pre-XDR-TB | lineage4.4.2 | None | ERR9119709 | MDR-TB | lineage2.2.1.1 | None | SRR3619764 | Pre-XDR-TB | lineage2.2.1 | None | ERR4830941 | Pre-XDR-TB | lineage2.2.1 | np | ERR502481 | RR-TB | lineage4.9 | None | SRR21469200 | Other | La1.7.1 | None | SRR21727760 | Other | lineage2.2.1 | None | ERR502474 | RR-TB | lineage4.9 | None | ERR978694_ERR978693 | Other | lineage4.8 | None | ERR4816717 | RR-TB | lineage3.1.2.1 | None | SRR7131229 | Other | lineage4.1.2.1 | None | ERR7801175 | HR-TB | lineage4.6.5 | None | SRR6046117 | Other | lineage4.9 | None | ERR10796571 | Other | lineage4.9 | None | ERR10796589 | Other | lineage4.9 | None | SRR6397640 | Other | lineage4.2.1.1 | None | ERR4457829 | MDR-TB | lineage4.1.2.1 | None | DRR184982 | Other | lineage2.2.1 | None | ERR4872322 | Pre-XDR-TB | lineage2.2.1 | None | SAMEA3501015 | Other | lineage4.8 | None | ERR867538 | Other | lineage4.2.2.2 | None | ERR3132175 | Pre-XDR-TB | lineage2.2.1 | None | ERR4972575 | XDR-TB | lineage4.3.3;lineage4.4.1.1 | None | SRR1140716 | Other | lineage3 | None | SRR1140712 | MDR-TB | lineage4.6.1.2 | None | SRR14782539 | MDR-TB | lineage4.2.1 | None | SRR7645928 | Other | lineage4.7 | None | SRR7653079 | Pre-XDR-TB | lineage2.2.1 | None | ERR10796560 | Other | lineage4.9 | None | ERR5866202 | Pre-XDR-TB | lineage2.2.1 | None | SRR10430377 | MDR-TB | lineage2.2.1 | None | ERR4799529 | XDR-TB | lineage2.2.1 | in | SRR5007204 | Other | lineage4.1.2.1 | None | ERR2228910 | Other | lineage4.8 | None | SRR15315797 | RR-TB | lineage2.2.1 | None | ERR911929_ERR911930 | Other | lineage4.8 | None | SRR9738555 | Pre-XDR-TB | lineage4.8 | None | SRR18003009 | MDR-TB | lineage2.2.1 | None | SRR18002891 | MDR-TB | lineage2.2.1 | None | SRR1049673 | Pre-XDR-TB | lineage3 | None | SRR023450 | RR-TB | lineage2.2.1 | None | ERR4815079 | RR-TB | lineage3 | None | ERR10219876 | Other | lineage4.3.4.2 | None | SRR1159747 | Pre-XDR-TB | lineage4.3.3 | None | SRR1049676 | MDR-TB | lineage4.3.3;lineage4.8 | None | SRR6046839 | Other | lineage4.9 | None | SRR1062919 | HR-TB | lineage2.2.1 | None | SRR7131236 | Other | lineage4.3.4.2 | None | ERR2229436 | Other | lineage4.8 | None | ERR019855 | Other | lineage3 | None | ERR6197023 | MDR-TB | lineage4.3.4.2;lineage4.7 | None | SRR18002995 | Other | lineage4.4.2 | None | ERR10796594 | Other | lineage4.9 | None | ERR10796640 | Other | lineage4.1.2.1 | None | ERR9119733 | MDR-TB | lineage2.2.1 | None | ERR4769554 | RR-TB | lineage4.9 | None | SRR11342669 | Other | lineage4.8 | None | ERR978726 | RR-TB | lineage4.8 | None | ERR978756 | Other | lineage4.8 | None | ERR5162090 | RR-TB | lineage4.9 | None | SRR7755655 | Other | lineage4.1.2.1 | None | SRR15316595 | RR-TB | lineage4.4.2 | None | SRR11972425 | Pre-XDR-TB | lineage2.2.1 | None | SRR6045843 | Other | lineage4.2.2.2 | None | SRR6046210 | Other | lineage4.9 | None | SRR22175249 | Pre-XDR-TB | lineage2.2.1 | None | ERR6358979 | Other | lineage4.9 | None | SRR9970980 | HR-TB | lineage4.1.2 | None | ERR4817204 | Other | lineage4.9 | None | ERR4799911 | XDR-TB | lineage2.2.1 | in | SRR17658004 | Pre-XDR-TB | lineage2.2.1 | None | ERR6866241 | Other | lineage4.3.2 | None | ERR10796626 | Other | lineage4.1.2.1 | None | SRR18002876 | MDR-TB | lineage2.2.1;lineage2.2.2 | None | SRR7645899 | Other | lineage2.2.1 | None | ERR4821172 | RR-TB | lineage4.9 | None | ERR7801176 | RR-TB | lineage4.6.5 | None | SRR1167307 | MDR-TB | lineage4.1.1.3 | None | ERR10796634 | Other | lineage4.7 | None | SRR29273964 | Pre-XDR-TB | lineage4.8 | None | ERR978752 | Other | lineage4.8 | None | SRR1173421 | Other | lineage4.9 | None | ERR10796559 | Other | lineage4.9 | None | ERR867569 | Other | lineage4.9 | None | ERR10796581 | Other | lineage4.1.2 | None | ERR2027257 | Other | lineage4.1.2.1 | None | SRR7070446 | Other | lineage3 | None | SRR18665464 | MDR-TB | lineage4.1.1.3 | None | ERR5908124 | Other | lineage4.8 | None | SRR7069946 | Other | lineage4.8 | None | SRR1165336 | Pre-XDR-TB | lineage4.1.1.3 | None | ERR3275941 | RR-TB | lineage4.3 | nl | SRR3618864 | Pre-XDR-TB | lineage2.2.1 | None | SRR12634609 | MDR-TB | lineage3.1.1 | None | ERR017781 | Other | lineage3 | None | ERR688014 | Pre-XDR-TB | lineage3 | None | SRR1140724 | Other | lineage2.2.1 | None | SRR9738517 | Pre-XDR-TB | lineage4.8 | None | ERR10796599 | Other | lineage4.8 | None | ERR10796597 | Other | lineage4.3.3 | None | SRR15508556 | Other | lineage4.3.4.1 | None | ERR229982 | Pre-XDR-TB | lineage2.2.1 | ru | ERR4813341 | Pre-XDR-TB | lineage4.1.1 | pe | ERR3287507 | RR-TB | lineage2.2.1.1 | pe | ERR4830649 | MDR-TB | lineage2.2.1 | None | ERR4830615 | MDR-TB | lineage2.2.1 | None | ERR4797885 | XDR-TB | lineage2.2.1 | None | SRR1049726 | Other | lineage4.1.2.1;lineage4.4.1.1 | None | SRR1173310 | Other | lineage3.1.1 | None | SRR1175474 | Other | lineage4.9 | None | SRR18002887 | MDR-TB | lineage2.2.1.1 | None | SRR18002981 | Other | lineage2.2.1 | None | SRR6044873 | Other | lineage4.1.1.3.1 | None | SRR7069158 | Other | lineage3 | None | ERR867570 | RR-TB | lineage4.9 | None | ERR10796592 | Other | lineage4.9 | None | SRR6045986 | Other | lineage3 | None | SRR1049725 | Other | lineage4.1.2.1;lineage4.4.1 | None | SRR7069314 | Other | lineage3 | None | ERR323044 | HR-TB | lineage4.3.4.2.1 | None | ERR10796561 | Other | lineage4.3.2 | None | SRR24710286 | MDR-TB | lineage2.2.1 | None | ERR10796591 | Other | lineage4.9 | None | SRR29273953 | Pre-XDR-TB | lineage4.8 | None | SRR18002930 | MDR-TB | lineage2.2.1 | None | SRR18002947 | MDR-TB | lineage2.2.1 | None | SRR6045952 | HR-TB | M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | ERR2653134 | Pre-XDR-TB | lineage4.8 | None | ERR10762275 | MDR-TB | lineage4.2.1 | None | SRR11349147 | RR-TB | lineage4.3.2.1 | None | SAMEA3501063 | RR-TB | lineage4.8 | None | ERR6362659 | MDR-TB | lineage2.2.1.1 | None | SRR1049677 | MDR-TB | lineage4.3.3;lineage4.8 | None | SRR1173170 | Other | lineage4.9 | None | SRR11342662 | MDR-TB | lineage4.8.1 | None | SRR1175472 | RR-TB | lineage4.3.4.1 | None | SRR1180921 | Pre-XDR-TB | lineage4.3.3 | None | SRR1181098 | Pre-XDR-TB | lineage4.3.3 | None | SRR12062493 | Pre-XDR-TB | lineage4.4.2 | None | ERR4816868 | Other | lineage4.4.1.1 | None | ERR978750 | RR-TB | lineage4.8 | None | ERR4024582 | MDR-TB | lineage4.1.2.1 | None | SRR18002874 | MDR-TB | lineage2.2.1 | None | SRR1049560 | MDR-TB | lineage4.3.4.2.1 | None | SRR7755657 | Other | lineage4.8 | None | SRR1049675 | HR-TB | lineage2.2.1 | None | SRR6397733 | Other | lineage4.4.1.2 | None | ERR4798023 | XDR-TB | lineage2.2.1 | in | ERR4808964 | RR-TB | lineage2.2.1 | None | ERR978733 | RR-TB | lineage4.8 | None | SRR1173624 | MDR-TB | lineage4.1.1.3 | None | SRR5007161 | RR-TB | lineage4.1.1.3.1;lineage4.9 | None | ERR10796562 | Other | lineage4.3.4.1 | None | ERR978761 | Other | lineage4.8 | None | SRR10993951 | RR-TB | La1.6 | None | SRR1181403 | Other | lineage4.9 | None | SRR7069922 | Other | lineage2.2.1 | None | ERR4831271 | MDR-TB | lineage4.8 | de | ERR978746_ERR978747_ERR978748 | RR-TB | lineage4.8 | None | SRR18003015 | MDR-TB | lineage2.2.1 | None | ERR2027209 | MDR-TB | lineage1.2.1.1 | None | SRR18003004 | Pre-XDR-TB | lineage2.2.2 | None | SRR28706466 | XDR-TB | lineage2.2.1 | None | ERR2513382 | RR-TB | lineage4.1.1.3 | None | ERR4799790 | XDR-TB | lineage2.2.1 | in | SRR9971041 | MDR-TB | lineage4.3.3 | None | SRR7069931 | Other | lineage4.2.2.2 | None | SRR11342684 | HR-TB | lineage4.4.1.1 | None | ERR867568 | Other | lineage2.2.1;lineage4 | None | ERR4818624 | Other | lineage4.3.4.2.1 | None | SRR1180440 | Other | lineage4.9 | None | SRR1140574 | MDR-TB | lineage4.3.3;lineage4.8 | None | SRR18002941 | RR-TB | lineage2.2.1 | None | SRR18003042 | Other | lineage2.2.1 | None | SRR13423564 | Pre-XDR-TB | lineage2.2.1 | None | SRR25207229 | MDR-TB | lineage2.2.1 | None | ERR867524 | Pre-XDR-TB | lineage4.2.1 | None | SRR19303820 | RR-TB | lineage4.8 | None | SRR7645977 | MDR-TB | lineage4.2.1 | None | SRR6046440 | Other | lineage3.1.2.2 | None | ERR4800564 | Pre-XDR-TB | lineage2.2.1 | in | ERR5866203 | Pre-XDR-TB | lineage2.2.1 | None | SRR1173719 | Other | lineage4.9 | None | SRR3675265 | Other | lineage4 | None | SRR5007167 | RR-TB | lineage4.1.1.3.1 | None | SRR18002974 | Other | lineage2.2.1 | None | SRR3675565 | Other | lineage4 | None | SRR1140753 | RR-TB | lineage4.3.4.2.1 | None | ERR751345 | Other | lineage5.1.1 | None | SRR11662552 | MDR-TB | lineage2.2.1 | None | ERR10796628 | Other | lineage4.3.3 | None | SRR7131123 | Other | lineage4.8 | None | SRR5007163 | Other | lineage3;lineage4.9 | None | SRR7069835 | Other | lineage2.2.1 | None | ERR10796633 | Other | lineage4.3.4.2 | None | ERR13290849 | MDR-TB | lineage2.1 | None | SRR18003038 | Other | lineage2.2.1 | None | SRR1167260 | Pre-XDR-TB | lineage4.1.1.3 | None |
|---|
