EBG00000313339 - n.699T>C
Drug resistance types
80 Sensitive
32 RR-TB
90 HR-TB
65 MDR-TB
14 Pre-XDR-TB
3 XDR-TB
225 Other
lineage Counts
| lineage | Count |
|---|---|
| La3;lineage2 | 1 |
| lineage2.1;lineage4.9;lineage6.3 | 8 |
| lineage4.9 | 163 |
| 19 | |
| lineage4.3.3 | 9 |
| lineage2.1;lineage4.9 | 12 |
| lineage4.6.4 | 2 |
| La3;lineage2.1;lineage4.9 | 3 |
| lineage4.1.1.3 | 9 |
| lineage2.2.1 | 36 |
| La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 | 4 |
| La3;lineage2.1;lineage4.9;lineage6.3 | 3 |
| La3;M.canetti;lineage4.9 | 2 |
| lineage4.8 | 11 |
| lineage4.3.1;lineage4.9;lineage6 | 1 |
| La1.2 | 2 |
| lineage4.6.1.1 | 3 |
| La1.6;La3;lineage4.6.4;lineage4.9 | 1 |
| lineage2.2;lineage4 | 1 |
| lineage4 | 4 |
| lineage2.2.1;lineage6.3 | 1 |
| M.canetti;lineage2.1;lineage4.9;lineage6.3 | 3 |
| lineage4.6.2.2 | 3 |
| M.canetti;lineage2.1;lineage4.9 | 12 |
| lineage3 | 7 |
| M.canetti;lineage2.2.2;lineage6.2 | 2 |
| lineage2.1;lineage4.1.4;lineage4.9 | 1 |
| lineage3.1.1 | 2 |
| lineage2.2.2;lineage4 | 1 |
| La1.6;La3;M.canetti;lineage2.1;lineage4.9 | 1 |
| lineage2.1;lineage4.1.1.1;lineage6.3 | 2 |
| La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 | 1 |
| lineage4.6.1.2 | 3 |
| lineage4.1.1.1 | 3 |
| lineage4.1.3 | 3 |
| lineage1.2.2.2 | 1 |
| lineage5.2 | 2 |
| lineage4.3.4.1 | 6 |
| La3;lineage4.9 | 6 |
| lineage4.3.2.1 | 3 |
| La3;M.canetti;lineage2.1;lineage4.9 | 12 |
| lineage1.1.1.1 | 1 |
| lineage4.1.2.1;lineage4.9 | 1 |
| lineage2.1;lineage2.2;lineage6.3 | 1 |
| lineage4.3.4.2.1 | 10 |
| lineage4.1.2.1 | 16 |
| lineage1.1.1;lineage4 | 1 |
| M.canetti;lineage2.1 | 1 |
| lineage4.6.3;lineage4.9 | 1 |
| La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 | 4 |
| lineage2.1 | 3 |
| M.canetti;lineage2.2 | 3 |
| lineage4.1;lineage4.8 | 2 |
| La1.7.1 | 1 |
| lineage2.1;lineage6.3 | 1 |
| La3;M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 | 1 |
| lineage2.2 | 3 |
| M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 | 4 |
| lineage2.2;lineage4.9 | 1 |
| lineage4.7 | 1 |
| M.canetti;lineage4.9 | 1 |
| lineage4.2.1 | 2 |
| lineage4.1;lineage4.9 | 2 |
| lineage4.4.1.1 | 2 |
| lineage4.3.4.2 | 1 |
| M.canetti;lineage2.1;lineage4.1.2.1 | 1 |
| lineage4.4.2 | 1 |
| lineage4.5 | 3 |
| La1.8.1 | 5 |
| lineage2.2.2 | 3 |
| La3 | 2 |
| lineage3;lineage4 | 1 |
| lineage4.9;lineage7 | 1 |
| La3;lineage2.2.1 | 2 |
| lineage4.8.1 | 2 |
| lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 | 1 |
| lineage4.2.2 | 1 |
| lineage4.9.1 | 1 |
| lineage3.1 | 1 |
| lineage1.2.1.2.1 | 1 |
| lineage4.9;lineage6.3 | 7 |
| lineage2.2.1.1 | 2 |
| La1.2.BCG | 1 |
| La3;M.canetti;lineage3.1 | 1 |
| lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | 1 |
| M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 | 1 |
| La1.7;M.canetti;lineage4.9 | 1 |
| lineage4.1.2.1;lineage4.4.1 | 1 |
| La3;M.canetti;lineage4.8;lineage4.9 | 1 |
| lineage4.9;lineage6.1.3 | 1 |
| lineage2.2.1.2;lineage7 | 1 |
| lineage2.2.1;lineage4 | 1 |
| La3;M.canetti;lineage2.1;lineage3.1 | 1 |
| lineage6.1.3 | 2 |
| M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 | 1 |
| lineage4.2.2.2 | 1 |
| La1.6;La3;lineage4.9 | 1 |
| La3;lineage2.2.2 | 1 |
| lineage2.2.1;lineage3 | 1 |
| La1.2;La1.8.1 | 1 |
| lineage1.1.3.2 | 1 |
| lineage2.1;lineage4.9;lineage6.3;lineage8 | 1 |
| M.canetti;lineage2.1;lineage6.3 | 1 |
| lineage4.4.1.2 | 1 |
| La3;lineage4.8 | 1 |
| La1.7;lineage4.2 | 1 |
| lineage3;lineage4.9 | 1 |
| lineage1.1 | 1 |
| lineage4.1.1.3;lineage4.9 | 2 |
| lineage4.1.2.1;lineage4.4.1.1 | 1 |
| lineage2.2.1;lineage4.9 | 1 |
| La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 | 1 |
| La3;lineage2.1;lineage6.3 | 1 |
| lineage4.2.1.1;lineage4.3.3 | 1 |
| M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | 1 |
| La1.6;La3;M.canetti;lineage4.8.1;lineage4.9 | 1 |
| La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9 | 1 |
| La3;M.canetti;lineage2.2.1 | 1 |
| lineage1.2.1.1 | 1 |
| lineage6.3.1 | 1 |
| M.canetti;lineage2.1;lineage4 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 509 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR20969677 | HR-TB | La3;lineage2 | None | ERR736871 | HR-TB | lineage2.1;lineage4.9;lineage6.3 | None | ERR369158 | Other | lineage4.9 | None | SRR1175074 | Other | None | ERR369151 | Other | lineage4.9 | None | ERR4811075 | Other | lineage2.1;lineage4.9;lineage6.3 | None | SRR12708409 | HR-TB | lineage4.3.3 | None | ERR294248 | MDR-TB | lineage2.1;lineage4.9 | None | ERR502481 | RR-TB | lineage4.9 | None | ERR4872102 | MDR-TB | lineage4.6.4 | None | ERR736874 | Other | La3;lineage2.1;lineage4.9 | None | ERR550636 | MDR-TB | lineage4.1.1.3 | None | SRR1173629 | Other | lineage2.1;lineage4.9 | None | ERR4817896 | HR-TB | lineage2.2.1 | None | ERR9119508 | MDR-TB | lineage4.6.4 | None | ERR8665994 | Other | lineage4.9 | None | ERR4769554 | RR-TB | lineage4.9 | None | ERR2693245 | HR-TB | La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 | None | SRR28119741 | Pre-XDR-TB | lineage2.2.1 | None | ERR3797017 | HR-TB | La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 | None | SRR11972425 | Pre-XDR-TB | lineage2.2.1 | None | SRR5341296 | Sensitive | lineage4.9 | None | SRR1169194 | Other | lineage4.9 | None | ERR4811142 | RR-TB | La3;lineage2.1;lineage4.9;lineage6.3 | None | ERR473277 | HR-TB | La3;M.canetti;lineage4.9 | None | ERR12015086 | RR-TB | lineage4.8 | None | SRR6046299 | Other | lineage4.3.1;lineage4.9;lineage6 | None | ERR4769427 | Other | La1.2 | None | ERR2693228 | RR-TB | lineage4.9 | None | ERR987765 | Sensitive | lineage4.6.1.1 | None | SRR20969731 | Other | lineage2.2.1 | None | ERR2693231 | Other | La1.6;La3;lineage4.6.4;lineage4.9 | None | ERR363506 | Sensitive | lineage4.9 | None | SRR16156832 | RR-TB | lineage2.2;lineage4 | None | SRR12708371 | HR-TB | lineage4.1.1.3 | None | ERR4799547 | HR-TB | lineage2.2.1 | None | SRR10303325 | MDR-TB | lineage2.2.1 | None | ERR363479 | Sensitive | lineage4.9 | None | ERR369161 | Sensitive | lineage4.9 | None | SRR3675448 | Other | lineage4.9 | None | SRR3675473 | Sensitive | lineage4.9 | None | SRR1184312 | Other | lineage2.2.1 | None | ERR2027263 | Other | lineage4 | None | SRR28119811 | Other | lineage2.2.1;lineage6.3 | None | SRR13423649 | Sensitive | lineage2.2.1 | None | ERR5311078 | MDR-TB | M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | SRR26159043 | Other | lineage4.9 | None | ERR9119525 | MDR-TB | lineage4.6.2.2 | None | SRR6789626 | Other | None | ERR363449 | Sensitive | lineage4.9 | None | ERR363474 | Sensitive | lineage4.9 | None | ERR161033 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR4769450 | Other | lineage4.9 | None | SRR1172968 | Sensitive | lineage3 | None | ERR1873492 | HR-TB | M.canetti;lineage2.2.2;lineage6.2 | None | ERR4872119 | MDR-TB | lineage4.6.2.2 | None | ERR3797036 | HR-TB | lineage2.1;lineage4.1.4;lineage4.9 | None | SRR3675248 | Other | lineage4.9 | None | ERR502478 | RR-TB | lineage4.9 | None | SRR1196474 | Other | lineage3.1.1 | None | SRR29093105 | Other | lineage2.2.2;lineage4 | None | SRR1196546 | Other | lineage4.9 | None | ERR3283020 | HR-TB | La1.6;La3;M.canetti;lineage2.1;lineage4.9 | None | SRR6325447 | MDR-TB | lineage2.1;lineage4.1.1.1;lineage6.3 | None | SRR6046644 | HR-TB | La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 | None | SRR1049581 | MDR-TB | lineage4.6.1.2 | None | SRR6458423 | HR-TB | lineage2.2.1 | None | SRR6458421 | MDR-TB | lineage2.2.1 | None | SRR6045371 | Other | lineage4.9 | None | SRR29051093 | Other | lineage4.9 | None | ERR176793 | Other | lineage4.1.1.1 | None | ERR278594 | HR-TB | lineage2.1;lineage4.9 | None | SRR3675260 | Sensitive | lineage4.9 | None | ERR4811311 | Other | lineage2.1;lineage4.9;lineage6.3 | None | DRR184629 | Other | lineage2.2.1 | None | ERR363509 | Sensitive | lineage4.9 | None | ERR2693230 | HR-TB | La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 | None | ERR3804169 | HR-TB | lineage4.1.3 | None | SRR12708372 | Sensitive | lineage4.9 | None | ERR4797201 | Other | lineage1.2.2.2 | None | ERR4872094 | MDR-TB | lineage5.2 | None | SRR3675541 | Sensitive | lineage4.9 | None | SRR28119777 | Other | lineage4.9 | None | ERR4812155 | Other | lineage4.9 | None | SRR13583478 | HR-TB | lineage4.3.4.1 | None | ERR176643 | Other | La3;lineage4.9 | None | SRR29050984 | Other | lineage4.9 | None | SRR1173400 | Other | lineage4.9 | None | SRR3675581 | Other | lineage2.1;lineage4.9 | None | SRR6045050 | Sensitive | lineage4.3.2.1 | None | ERR323055 | MDR-TB | La3;M.canetti;lineage2.1;lineage4.9 | None | SRR12416840 | MDR-TB | lineage4.9 | None | ERR9806975 | Pre-XDR-TB | lineage2.2.1 | None | ERR702404 | HR-TB | lineage2.1;lineage4.9;lineage6.3 | None | ERR363447 | Other | lineage4.9 | None | ERR752012 | HR-TB | lineage1.1.1.1 | None | ERR5311096 | HR-TB | M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | ERR373947 | Other | lineage4.9 | None | SRR1062928 | Other | lineage4.1.2.1;lineage4.9 | None | SRR29050928 | Other | lineage4.9 | None | ERR13432057 | Other | lineage4.3.3 | None | ERR13285305 | Other | lineage4.9 | None | SRR29016780 | Other | lineage4.9 | None | SRR3675527 | Other | lineage4.9 | None | ERR8976043 | HR-TB | lineage2.1;lineage2.2;lineage6.3 | None | SRR3675311 | Other | lineage4.9 | None | ERR13292525 | Other | lineage4.9 | None | SRR12708416 | Sensitive | None | SRR1062871 | RR-TB | lineage4.3.4.2.1 | None | SRR1196478 | Other | lineage4.9 | None | ERR323033 | MDR-TB | La3;M.canetti;lineage2.1;lineage4.9 | None | ERR2041725 | MDR-TB | lineage4.1.2.1 | None | ERR4831638 | Sensitive | lineage1.1.1;lineage4 | None | ERR867545 | Other | lineage4.9 | None | SRR2010299 | MDR-TB | lineage2.2.1 | None | ERR323041 | HR-TB | M.canetti;lineage2.1 | None | ERR349296 | Sensitive | lineage4.9 | None | SAMN02599137 | Sensitive | lineage3 | None | ERR9119096 | RR-TB | lineage4.3.3 | None | ERR11252558 | Other | lineage4.6.3;lineage4.9 | None | ERR11252664 | Other | lineage2.2.1 | None | ERR212001 | HR-TB | None | ERR212033 | Other | lineage4.9 | None | SRR6325442 | HR-TB | lineage2.1;lineage4.1.1.1;lineage6.3 | None | SRR6789621 | Other | lineage4.9 | None | SRR1173559 | Sensitive | lineage3 | None | SRR8552928 | HR-TB | lineage2.1;lineage4.9;lineage6.3 | None | SRR1173770 | Other | lineage4.9 | None | ERR124652 | HR-TB | La3;M.canetti;lineage2.1;lineage4.9 | None | ERR126600 | HR-TB | La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | ERR349264 | Sensitive | lineage4.9 | None | ERR369156 | Sensitive | lineage4.9 | None | ERR502908 | HR-TB | lineage2.2.1 | None | ERR9786601 | Other | lineage4.1.2.1 | None | SRR12142341 | HR-TB | lineage2.1 | None | SRR1175491 | MDR-TB | lineage4.3.4.1 | None | ERR7911670 | XDR-TB | M.canetti;lineage2.2 | None | ERR323047 | HR-TB | La3;M.canetti;lineage2.1;lineage4.9 | None | ERR9786525 | Other | lineage4.1;lineage4.8 | None | SRR7240492 | HR-TB | La1.7.1 | None | SRR1640750 | Other | None | SRR5341333 | Other | lineage2.1;lineage4.9 | None | ERR867544 | Other | lineage4.9 | None | SRR6045217 | Sensitive | lineage4.9 | None | ERR3275196 | Other | lineage2.2.1 | nl | SRR6045503 | Sensitive | lineage4.9 | None | SRR1140736 | Other | lineage4.1.2.1 | None | ERR363498 | Sensitive | lineage4.9 | None | ERR4831546 | HR-TB | M.canetti;lineage2.2.2;lineage6.2 | None | ERR502474 | RR-TB | lineage4.9 | None | SRR1184388 | Other | lineage2.1;lineage4.9 | None | ERR400320 | Sensitive | lineage4.9 | None | SRR5535933 | Other | lineage4.9 | None | ERR9786682 | Other | lineage4.1.2.1 | None | SRR1173355 | Other | lineage4.9 | None | SRR19303884 | Other | lineage2.1;lineage6.3 | None | ERR124651 | MDR-TB | La3;M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 | None | SRR22175249 | Pre-XDR-TB | lineage2.2.1 | None | ERR3797083 | RR-TB | lineage4.9 | None | SRR20969708 | HR-TB | lineage2.2 | None | ERR5311100 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR13292526 | Other | lineage4.9 | None | SRR6325445 | HR-TB | M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 | None | SRR1196494 | MDR-TB | None | ERR323040 | HR-TB | La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | ERR349300 | Sensitive | lineage4.9 | None | ERR363421 | Sensitive | lineage4.9 | None | ERR4815550 | Other | lineage2.2;lineage4.9 | None | ERR11466146 | Other | lineage4.3.4.2.1 | None | SRR3675514 | Sensitive | lineage4.9 | None | ERR4799025 | Other | lineage4.8 | None | SRR6046492 | Other | lineage4.9 | None | SRR1169249 | Other | lineage4.9 | None | ERR987707 | MDR-TB | lineage4.7 | None | ERR4769508 | RR-TB | lineage4.9 | None | SRR16156775 | Other | lineage4.9 | None | ERR1873396 | Pre-XDR-TB | M.canetti;lineage2.2 | None | ERR736839 | HR-TB | M.canetti;lineage4.9 | None | SRR14782054 | Other | lineage4.9 | None | SRR23310833 | MDR-TB | lineage4.2.1 | None | ERR9786526 | Other | lineage4.1;lineage4.8 | None | ERR349265 | Other | lineage4.9 | None | ERR373945 | Sensitive | lineage4.9 | None | SRR12708374 | Sensitive | lineage4.1;lineage4.9 | None | SRR12708398 | Sensitive | lineage4.4.1.1 | None | ERR11081257 | Other | lineage4.8 | None | SRR13861381 | HR-TB | lineage4.9 | None | ERR363426 | Sensitive | lineage4.9 | None | ERR6865502 | Sensitive | lineage4 | None | ERR323064 | MDR-TB | La3;M.canetti;lineage2.1;lineage4.9 | None | ERR12015085 | Other | lineage4.8 | None | SRR11662694 | Other | lineage4.9 | None | ERR4769457 | Other | lineage4.9 | None | SAMN02380990 | MDR-TB | lineage4.6.1.2 | None | ERR3283016 | HR-TB | La3;M.canetti;lineage2.1;lineage4.9 | None | ERR502473 | RR-TB | lineage4.9 | None | SRR1184380 | Other | lineage2.1;lineage4.9 | None | SRR3675318 | Other | lineage4.9 | None | SRR20970043 | MDR-TB | lineage2.2.1 | None | SRR6046802 | Other | lineage4.9 | None | SRR29096900 | Sensitive | lineage4.3.4.2 | None | SRR29017461 | Other | La3;lineage4.9 | None | ERR1023295 | MDR-TB | M.canetti;lineage2.1;lineage4.1.2.1 | None | SRR3675515 | HR-TB | M.canetti;lineage2.1;lineage4.9 | None | DRR188519 | Other | lineage4.4.2 | None | SRR7535086 | Other | None | ERR363499 | Sensitive | lineage4.9 | None | ERR349298 | Sensitive | lineage4.9 | None | SRR1165699 | Other | lineage4.9 | None | ERR4819877 | HR-TB | lineage4.9 | None | ERR11049020 | Other | lineage4.8 | None | ERR126618 | MDR-TB | La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | ERR4800341 | Other | lineage3 | None | SRR13423544 | Other | lineage4.5 | None | ERR5311077 | Other | La1.8.1 | None | ERR4769493 | Other | lineage4.9 | None | ERR13292528 | Other | lineage4.9 | None | ERR736859 | HR-TB | M.canetti;lineage2.1;lineage4.9 | None | SAMN02380982 | MDR-TB | lineage4.3.4.2.1 | None | SRR28868489 | Other | lineage2.2.1 | None | ERR369160 | Sensitive | lineage4.9 | None | ERR363445 | Other | lineage4.9 | None | ERR3797062 | RR-TB | lineage4.9 | None | ERR363502 | Other | lineage4.9 | None | DRR185024 | Other | lineage2.2.2 | None | ERR176766 | HR-TB | lineage2.1;lineage4.9 | None | ERR9786611 | HR-TB | lineage4.1.3 | None | SRR14782405 | HR-TB | lineage4.9 | None | SRR1172817 | Other | La3 | None | SRR3619841 | Pre-XDR-TB | lineage2.2.1 | None | SRR1173740 | Other | lineage3;lineage4 | None | ERR736867 | Other | lineage2.1;lineage4.9 | None | ERR4831117 | HR-TB | lineage4.9;lineage7 | None | SRR26937071 | MDR-TB | La3;lineage2.2.1 | None | ERR3797046 | HR-TB | lineage4.9 | None | SRR12708389 | MDR-TB | lineage4.8.1 | None | ERR1334034 | Other | lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 | None | SRR5341302 | Other | La3;lineage2.1;lineage4.9 | None | ERR2229542 | Other | lineage4.8 | None | ERR323043 | Other | lineage2.1;lineage4.9 | None | SRR28119843 | Sensitive | lineage4.9 | None | DRR188816 | Sensitive | lineage4.2.2 | None | ERR4819383 | RR-TB | lineage4.9 | None | ERR037504 | Other | lineage4.9.1 | None | SRR1184346 | HR-TB | lineage3.1 | None | SRR1792022 | Other | La1.8.1 | None | SRR1510066 | RR-TB | lineage1.2.1.2.1 | None | ERR9786645 | Other | lineage4.6.2.2 | None | SRR23961549 | Other | La1.2 | None | ERR5908228 | RR-TB | lineage4.3.3 | None | SRR6046225 | Other | lineage4.9;lineage6.3 | None | SRR1238558 | Other | lineage4.9 | None | SRR1184294 | Other | lineage4.9 | None | SRR6079962 | HR-TB | lineage2.2.1.1 | None | ERR867525 | Pre-XDR-TB | lineage2.2.1 | None | ERR6359082 | Other | lineage4.9 | None | ERR4798262 | HR-TB | La1.2.BCG | None | ERR323054 | MDR-TB | La3;M.canetti;lineage3.1 | None | SRR1792011 | Other | La1.8.1 | None | SRR1062918 | Other | lineage3 | None | ERR3804155 | Other | lineage4.1.2.1 | None | ERR4819863 | RR-TB | lineage4.9 | None | ERR4800527 | MDR-TB | lineage2.2.1 | None | ERR3797014 | Other | La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 | None | SRR11662690 | HR-TB | lineage4.9 | None | SRR5341456 | Other | lineage4.9 | None | ERR4811493 | HR-TB | lineage4.9 | None | SRR20970016 | Other | lineage2.2 | None | SRR12416824 | HR-TB | lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | None | ERR363456 | Sensitive | lineage4.9 | None | ERR9119500 | MDR-TB | lineage5.2 | None | ERR9786843 | Other | None | SRR1049582 | MDR-TB | lineage4.6.1.2 | None | SRR3675221 | Other | lineage4.9 | None | SRR1173118 | Other | lineage2.2.1 | None | SRR3675554 | HR-TB | M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | ERR9787197 | Other | None | SRR28119805 | Other | lineage4.9 | None | ERR6359045 | Other | M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 | None | SRR9971122 | MDR-TB | lineage4.8 | None | SRR9971333 | MDR-TB | lineage4.1.1.3 | None | ERR473314 | HR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR11465024 | Other | lineage4.1.1.3 | None | ERR2517475 | Other | lineage4 | None | SRR1162864 | Other | lineage4.1.2.1 | None | ERR3470647 | Other | lineage3 | None | ERR736835 | HR-TB | La1.7;M.canetti;lineage4.9 | None | SRR15508556 | Other | lineage4.3.4.1 | None | ERR2513405 | Other | lineage2.2.1 | None | SRR1167384 | Other | La3;lineage4.9 | None | SRR1173363 | Other | None | ERR4769530 | RR-TB | lineage4.9 | None | SRR3675572 | Other | None | ERR13292527 | Other | lineage4.9 | None | SRR1049725 | Other | lineage4.1.2.1;lineage4.4.1 | None | SRR1196566 | Other | lineage4.9 | None | SRR3675232 | Other | lineage4.1.2.1 | None | ERR363500 | Sensitive | lineage4.9 | None | ERR11488396 | MDR-TB | lineage4.8.1 | None | ERR038268 | HR-TB | La3;M.canetti;lineage4.8;lineage4.9 | None | ERR3445504 | Other | lineage4.9;lineage6.1.3 | None | SRR1173170 | Other | lineage4.9 | None | SRR14782539 | MDR-TB | lineage4.2.1 | None | ERR3283027 | Other | lineage2.1;lineage4.9;lineage6.3 | None | SRR19304036 | Other | La3;lineage2.1;lineage4.9;lineage6.3 | None | ERR13285304 | Other | lineage4.9 | None | ERR9786569 | Other | lineage4.8 | None | ERR12015084 | Other | lineage4.8 | None | SRR18549032 | HR-TB | lineage2.2.1.2;lineage7 | None | ERR752229 | Other | lineage4.5 | None | ERR1199132 | Sensitive | lineage4.6.1.1 | None | ERR2693229 | RR-TB | La3;M.canetti;lineage4.9 | None | ERR1035239 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR5311081 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR4811022 | HR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR3797069 | Other | lineage4.9 | None | SRR3675482 | Other | lineage4.9 | None | ERR502943 | Sensitive | lineage2.2.1;lineage4 | None | SRR1140753 | RR-TB | lineage4.3.4.2.1 | None | ERR323034 | MDR-TB | La3;M.canetti;lineage2.1;lineage3.1 | None | SRR1184298 | Pre-XDR-TB | lineage4.3.3 | None | SRR18003019 | Other | lineage2.2.1 | None | ERR323036 | HR-TB | La3;M.canetti;lineage2.1;lineage4.9 | None | ERR3806588 | Other | lineage6.1.3 | None | ERR124642 | MDR-TB | M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 | None | SRR3675210 | Sensitive | lineage4.9 | None | SRR3675292 | Sensitive | lineage4.9 | None | SRR18909918 | Other | lineage2.2.1.1 | None | ERR4178309 | Other | lineage4.1.2.1 | None | SRR11342687 | RR-TB | lineage4.2.2.2 | None | DRR184982 | Other | lineage2.2.1 | None | SRR3618864 | Pre-XDR-TB | lineage2.2.1 | None | ERR126608 | HR-TB | La3;M.canetti;lineage2.1;lineage4.9 | None | SRR6045548 | Sensitive | lineage4.9 | None | ERR736863 | HR-TB | La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | ERR363490 | Sensitive | lineage4.9 | None | ERR3797061 | Other | La1.6;La3;lineage4.9 | None | SRR1165628 | Other | La3;lineage4.9 | None | SRR11342642 | MDR-TB | lineage4.1.1.1 | None | ERR5917972 | MDR-TB | lineage4.4.1.1 | za | ERR4811105 | HR-TB | La3;lineage2.1;lineage4.9;lineage6.3 | None | SRR5341345 | Sensitive | lineage4.9 | None | SRR3675486 | HR-TB | M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 | None | SRR29093099 | MDR-TB | La3;lineage2.2.2 | None | SRR25827497 | XDR-TB | lineage2.2.1;lineage3 | None | ERR2446566 | Other | lineage4.9 | None | ERR363437 | Sensitive | lineage4.9 | None | SRR11342686 | MDR-TB | lineage4.8 | None | SRR6046133 | HR-TB | lineage4.9 | None | SRR5341330 | Other | lineage4.9 | None | SRR29016901 | Other | La3;lineage4.9 | None | ERR400345 | Other | lineage4.9 | None | SRR7240033 | Other | La1.2;La1.8.1 | None | SRR29050859 | Other | lineage4.9 | None | ERR867554 | Other | lineage4.3.4.1 | None | ERR502479 | RR-TB | lineage4.9 | None | ERR11465665 | Other | lineage4.1.1.3 | None | SRR3675548 | Sensitive | lineage4.9 | None | ERR4178226 | Sensitive | lineage4 | None | SRR6982141 | Other | lineage4.3.3 | None | SAMEA2533358 | MDR-TB | lineage4.1.1.3 | None | SRR29055629 | MDR-TB | La3;lineage2.2.1 | None | ERR6865513 | Other | lineage4.1.2.1 | None | ERR4816198 | Sensitive | lineage4.1.3 | None | SRR28119753 | Other | lineage4.9 | None | SRR3675209 | Sensitive | lineage4.9 | None | ERR349299 | Other | lineage4.9 | None | ERR400326 | Other | lineage4.9 | None | SRR6789624 | HR-TB | lineage4.1.1.3 | None | ERR2041726 | MDR-TB | lineage4.1.2.1 | None | SRR11349186 | MDR-TB | lineage4.3.3 | None | SRR29093909 | Other | lineage4.9 | None | SRR5341323 | Sensitive | lineage4.9 | None | ERR400336 | Sensitive | lineage4.9 | None | ERR7821123 | Other | lineage1.1.3.2 | None | ERR4820030 | Other | lineage4.9 | None | SRR3675524 | Other | lineage4.9;lineage6.3 | None | ERR2229143 | RR-TB | lineage4.9 | None | SRR3675464 | HR-TB | lineage2.1;lineage4.9;lineage6.3;lineage8 | None | ERR4816904 | Sensitive | lineage4.1.2.1 | None | ERR11465025 | Other | lineage4.1.1.3 | None | ERR11081258 | Other | lineage4.8 | None | ERR4817731 | HR-TB | lineage4.9 | None | SRR6325444 | MDR-TB | M.canetti;lineage2.1;lineage6.3 | None | ERR13265748 | Other | lineage4.9;lineage6.3 | None | SRR1172728 | RR-TB | La3 | None | SRR3675518 | MDR-TB | M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 | None | ERR3468488 | Other | La1.8.1 | None | ERR702406 | Other | lineage2.1 | None | SRR3675549 | Other | lineage4.9 | None | ERR126597 | HR-TB | lineage4.4.1.2 | None | ERR11466499 | Other | lineage4.3.4.1 | None | ERR2886463 | Sensitive | lineage2.2.1 | None | SRR1172234 | Other | lineage4.9 | None | ERR8025636 | Pre-XDR-TB | lineage2.2.1 | None | ERR2660539 | Other | lineage4.9 | None | ERR12015083 | Other | La3;lineage4.8 | None | SRR16156697 | RR-TB | lineage2.2.1 | None | SRR1184329 | Other | lineage4.9 | None | SRR6045706 | Sensitive | lineage4.9 | None | ERR4797054 | Pre-XDR-TB | lineage2.1 | None | ERR4769452 | Other | lineage4.9 | None | ERR4769419 | Sensitive | lineage4.9 | None | SRR28119752 | Other | lineage4.9 | None | ERR4799513 | HR-TB | lineage2.2 | None | SRR13591342 | HR-TB | lineage4.1.1.3 | None | ERR349266 | Sensitive | lineage4.9 | None | ERR369157 | Sensitive | lineage4.9 | None | ERR373946 | Sensitive | lineage4.9 | None | SRR1173185 | Other | lineage4.9 | None | SRR3675472 | Sensitive | lineage4.9 | None | SRR23961559 | Other | La1.7;lineage4.2 | None | SRR5341396 | Other | lineage3;lineage4.9 | None | ERR3077978 | RR-TB | lineage1.1 | None | ERR1873393 | HR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR3283006 | RR-TB | lineage4.9 | None | ERR323038 | HR-TB | La3;M.canetti;lineage2.1;lineage4.9 | None | ERR386953 | HR-TB | M.canetti;lineage2.1;lineage4.9 | None | SRR11342664 | MDR-TB | lineage2.2.2 | None | SRR1165584 | Other | lineage4.1.2.1 | None | ERR9786642 | Other | lineage4.1.2.1 | None | SRR1184381 | MDR-TB | None | SRR6325448 | HR-TB | M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 | None | ERR11252612 | Other | La3;lineage4.9 | None | SRR28044634 | Other | lineage3 | None | SRR25827682 | Other | None | ERR234659 | Other | None | ERR369159 | Sensitive | lineage4.9 | None | SRR1049559 | MDR-TB | lineage4.3.4.2.1 | None | ERR4797313 | Sensitive | lineage2.2.1 | None | ERR9786671 | Other | None | SRR28119756 | Other | lineage4.9;lineage6.3 | None | ERR176549 | Other | lineage4.3.4.2.1 | None | ERR349330 | Sensitive | lineage4.9 | None | ERR363446 | Sensitive | lineage4.9 | None | ERR9786421 | Other | lineage4.1.2.1 | None | SRR12634609 | MDR-TB | lineage3.1.1 | None | SRR1175500 | Sensitive | lineage4.1.1.3;lineage4.9 | None | SRR1184372 | MDR-TB | None | SRR1173633 | Other | lineage4.9 | None | SRR1175507 | Sensitive | lineage4.1.1.3;lineage4.9 | None | ERR9786604 | Other | None | SRR1049726 | Other | lineage4.1.2.1;lineage4.4.1.1 | None | SRR1165667 | Other | lineage4.9;lineage6.3 | None | ERR4831545 | XDR-TB | M.canetti;lineage2.2 | None | ERR323060 | HR-TB | La3;M.canetti;lineage2.1;lineage4.9 | None | ERR4815310 | Other | lineage2.2.1;lineage4.9 | None | ERR13265528 | Other | lineage4.9;lineage6.3 | None | ERR6358837 | HR-TB | La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 | None | ERR323044 | HR-TB | lineage4.3.4.2.1 | None | SRR23961558 | Other | lineage2.1;lineage4.9;lineage6.3 | None | SRR18289200 | Other | lineage4.9 | None | ERR3797023 | HR-TB | La1.8.1 | None | ERR9787165 | Other | lineage6.1.3 | None | SRR13861288 | Other | lineage4.9 | None | SRR13861510 | Other | lineage4.9 | None | SRR1173778 | Other | lineage4.9 | None | ERR176658 | HR-TB | M.canetti;lineage2.1;lineage4.9 | None | SRR10430377 | MDR-TB | lineage2.2.1 | None | ERR4810741 | HR-TB | La3;lineage2.1;lineage6.3 | None | SRR6046611 | Sensitive | lineage4.9 | None | ERR4798431 | Sensitive | lineage4.1;lineage4.9 | None | ERR4769417 | Pre-XDR-TB | lineage4.9 | None | ERR867542 | HR-TB | lineage4.2.1.1;lineage4.3.3 | None | SRR3742665 | HR-TB | M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | None | ERR2693257 | Other | La1.6;La3;M.canetti;lineage4.8.1;lineage4.9 | None | ERR176568 | HR-TB | La3;lineage2.1;lineage4.9 | None | ERR3797044 | Other | La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9 | None | ERR161034 | HR-TB | lineage4.3.4.2.1 | None | SRR1175496 | Sensitive | lineage4.9 | None | SRR3742657 | Pre-XDR-TB | La3;M.canetti;lineage2.2.1 | None | SRR1165506 | Other | lineage4.1.2.1 | None | ERR4811031 | Sensitive | lineage4.5 | None | ERR323063 | HR-TB | La3;M.canetti;lineage2.1;lineage4.9 | None | SRR12708414 | HR-TB | lineage2.2.1 | None | ERR2027209 | MDR-TB | lineage1.2.1.1 | None | SRR18003004 | Pre-XDR-TB | lineage2.2.2 | None | SRR10315556 | Sensitive | lineage2.2.1 | None | ERR323058 | HR-TB | La3;M.canetti;lineage2.1;lineage4.9 | None | ERR3283019 | Other | lineage2.1;lineage4.9 | None | SRR1173788 | Sensitive | lineage4.9 | None | ERR9787139 | Other | lineage6.3.1 | None | ERR369163 | Sensitive | lineage4.9 | None | SRR12708399 | MDR-TB | lineage4.3.4.2.1 | None | ERR3797016 | HR-TB | M.canetti;lineage2.1;lineage4.9 | None | SRR21732980 | Other | lineage4.3.3 | None | SRR25827507 | MDR-TB | lineage4.1.1.1 | None | ERR11466339 | RR-TB | lineage2.2.1 | None | SRR29051043 | Other | lineage4.3.3 | None | ERR3283036 | Other | lineage2.1;lineage4.9 | None | ERR4407463 | HR-TB | None | ERR9786694 | Other | lineage4.1.2.1 | None | SRR11349147 | RR-TB | lineage4.3.2.1 | None | SRR1172951 | Other | lineage4.9 | None | SRR1175472 | RR-TB | lineage4.3.4.1 | None | SRR1196768 | MDR-TB | None | SRR1049560 | MDR-TB | lineage4.3.4.2.1 | None | ERR2513724 | Sensitive | lineage4.3.2.1 | None | ERR369162 | Other | lineage4.9 | None | SRR3675508 | Other | lineage2.1;lineage4.9;lineage6.3 | None | ERR4811030 | Sensitive | lineage4.9 | None | ERR363453 | Sensitive | lineage4.9 | None | SRR9971114 | Other | lineage2.2.1 | None | SRR3675507 | Other | lineage4.9 | None | ERR11252736 | Other | lineage4.9 | None | ERR6358755 | Other | lineage4.6.1.1 | None | SRR28119717 | Other | lineage4.9;lineage6.3 | None | SRR29772570 | Other | lineage4.9 | None | ERR2693239 | RR-TB | M.canetti;lineage2.1;lineage4 | None |
|---|
