EBG00000313325 - n.622G>C
Drug resistance types
7 Sensitive
8 RR-TB
7 HR-TB
5 MDR-TB
7 Pre-XDR-TB
0 XDR-TB
8 Other
lineage Counts
| lineage | Count |
|---|---|
| La2 | 1 |
| lineage2.2.1 | 6 |
| lineage3.1.3 | 1 |
| lineage4.9 | 7 |
| La1.4 | 1 |
| lineage4 | 6 |
| lineage4.4.2 | 1 |
| lineage4.4.1.1 | 2 |
| La1.7.1 | 1 |
| lineage2.2 | 2 |
| lineage4.3.3 | 1 |
| lineage4.1.2 | 1 |
| lineage4.8 | 2 |
| lineage4.6.2.2 | 1 |
| lineage3 | 2 |
| lineage1.1.1 | 1 |
| lineage4.1.1.3 | 1 |
| lineage4.6.5 | 2 |
| La1.8.1 | 1 |
| lineage6 | 1 |
| lineage2.2.2 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 42 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR13888750 | Other | La2 | None | SRR11972425 | Pre-XDR-TB | lineage2.2.1 | None | SRR18913742 | Sensitive | lineage3.1.3 | None | SRR16156804 | RR-TB | lineage4.9 | None | SRR16278274 | Other | La1.4 | None | SRR22424765 | MDR-TB | lineage4 | None | SRR20969542 | Other | lineage4.4.2 | None | SRR2101637 | RR-TB | lineage4.4.1.1 | None | SRR21469201 | Other | La1.7.1 | None | SRR22424787 | Sensitive | lineage4.9 | None | SRR3619764 | Pre-XDR-TB | lineage2.2 | None | SRR3601585 | Pre-XDR-TB | lineage2.2 | None | SRR3619841 | Pre-XDR-TB | lineage2.2.1 | None | SRR6207283 | Sensitive | lineage4.3.3 | None | ERR4815581 | Other | lineage4.1.2 | None | SRR3618864 | Pre-XDR-TB | lineage2.2.1 | None | ERR2229198 | MDR-TB | lineage4.8 | None | ERR4816702 | RR-TB | lineage4.6.2.2 | None | ERR4817667 | HR-TB | lineage4.8 | None | ERR4818561 | HR-TB | lineage4 | None | ERR4819546 | HR-TB | lineage3 | None | ERR4819314 | Other | lineage1.1.1 | None | SRR6045359 | Sensitive | lineage4.9 | None | SRR1723736 | Sensitive | lineage2.2.1 | None | SRR6982239 | HR-TB | lineage4.1.1.3 | None | SRR6982090 | RR-TB | lineage4.4.1.1 | None | SRR9971060 | RR-TB | lineage2.2.1 | None | SRR6982246 | Sensitive | lineage4 | None | ERR4596902 | HR-TB | lineage3 | None | ERR067712 | HR-TB | lineage4 | None | ERR3283046 | MDR-TB | lineage4.9 | None | DRR184982 | RR-TB | lineage2.2.1 | None | ERR108125 | Pre-XDR-TB | lineage4.9 | None | ERR3797065 | MDR-TB | lineage4 | None | ERR4798823 | HR-TB | lineage4 | None | ERR4769406 | Other | lineage4.9 | None | ERR4796351 | MDR-TB | lineage4.9 | None | ERR7801175 | RR-TB | lineage4.6.5 | None | SRR11462861 | Other | La1.8.1 | None | ERR7801176 | RR-TB | lineage4.6.5 | None | ERR9787033 | Sensitive | lineage6 | None | ERR9992784 | Pre-XDR-TB | lineage2.2.2 | None |
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