EBG00000313325 - n.534T>C
Drug resistance types
30 Sensitive
21 RR-TB
6 HR-TB
19 MDR-TB
10 Pre-XDR-TB
0 XDR-TB
111 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.3.3 | 3 |
| lineage4 | 6 |
| 47 | |
| lineage3 | 17 |
| lineage4.8 | 12 |
| lineage4.6.1.1 | 3 |
| lineage2.2.2 | 1 |
| lineage4.3.4.2.1 | 5 |
| lineage1.1.1.1 | 2 |
| lineage2.2.1 | 16 |
| lineage4.4.1.1 | 3 |
| lineage4.3.1.1 | 2 |
| lineage4.6.2.2 | 2 |
| lineage2.2.1.1 | 3 |
| lineage1 | 2 |
| lineage4.6.1.2 | 3 |
| lineage4.1.2.1 | 5 |
| lineage4.4.1.2 | 1 |
| lineage3.1.2 | 1 |
| lineage5.1.1 | 1 |
| lineage4.7 | 2 |
| lineage4.9;lineage3.1.1 | 1 |
| lineage4.4.2 | 2 |
| lineage4.1.1 | 2 |
| lineage1.2.1.1 | 1 |
| lineage4.1 | 1 |
| lineage4.3.2.1 | 2 |
| lineage4.6.5 | 2 |
| lineage4.3.4.1 | 1 |
| lineage1.1.2 | 2 |
| lineage4.9;lineage2.2 | 1 |
| lineage4.1.2 | 2 |
| lineage4.9 | 20 |
| lineage4.3.4.2 | 3 |
| lineage4;lineage3 | 1 |
| lineage4.2.1 | 1 |
| lineage6 | 1 |
| lineage1.1.3.2 | 1 |
| lineage4.1.1.3 | 1 |
| La1.7.1 | 1 |
| lineage2.2 | 1 |
| lineage3.1.3 | 1 |
| lineage6.1.3 | 1 |
| lineage3.1.1 | 2 |
| lineage4.9.1 | 1 |
| lineage3.1 | 1 |
| lineage6.2.3;lineage1.1.2 | 1 |
| lineage4.3 | 1 |
| La1.6 | 1 |
| La1.8.1 | 1 |
| lineage4.3.4 | 1 |
| lineage3.1.2.1 | 1 |
| lineage4.1.1.3.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 197 |
Geographic prevalence
Country level data for this variant is available for 15 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR4819579 | HR-TB | lineage4.3.3 | None | SRR3675565 | Other | lineage4 | None | SRR5818446 | Other | None | SRR5818462 | Other | None | SRR5818439 | Sensitive | None | SRR6046291 | Other | lineage3 | None | SRR5818449 | MDR-TB | None | SRR6046208 | Other | lineage4.8 | None | SAMEA3501073 | RR-TB | lineage4.8 | None | SRR5818419 | Sensitive | None | SRR5818469 | Other | None | SRR5818402 | Other | None | SRR5818429 | Sensitive | None | ERR1198990 | Other | lineage4.6.1.1 | ug | SRR4033523 | Other | lineage2.2.2 | None | SRR5818666 | Other | lineage3 | None | ERR4820019 | Other | lineage4.3.4.2.1 | None | SRR6046612 | Other | lineage1.1.1.1 | None | ERR2513405 | Other | lineage2.2.1 | None | SRR3675230 | RR-TB | lineage3 | None | SRR5818399 | Sensitive | None | ERR4818851 | RR-TB | lineage4.4.1.1 | None | SRR5818453 | Sensitive | None | SRR6045805 | Other | lineage4.3.1.1 | None | ERR4816129 | HR-TB | lineage4.6.2.2 | gb | SRR5818647 | RR-TB | lineage4.3.4.2.1 | None | SRR5818423 | MDR-TB | None | ERR2229198 | MDR-TB | lineage4.8 | None | SRR5818436 | Sensitive | None | ERR4831863 | HR-TB | lineage2.2.1.1 | None | SRR8651566 | Pre-XDR-TB | lineage2.2.1 | None | ERR4818988 | Other | lineage1 | None | SRR5818386 | Other | None | SRR5818457 | Other | None | SRR5818426 | Other | None | SRR5818410 | Sensitive | None | ERR245801 | Other | lineage4.3.4.2.1 | None | ERR4820188 | Other | lineage3 | gb | SAMN02380990 | MDR-TB | lineage4.6.1.2 | None | ERR1199057 | Other | lineage4.6.1.1 | ug | ERR4821769 | Other | lineage4.1.2.1 | None | ERR4816270 | Other | lineage4.1.2.1 | None | ERR4818043 | Sensitive | lineage4.8 | gb | SRR5818413 | Sensitive | None | SRR6045616 | Other | lineage4.4.1.2 | gb | SRR6046177 | Other | lineage3.1.2 | None | ERR1199064 | Other | lineage4.6.1.1 | ug | ERR502517 | MDR-TB | lineage5.1.1 | None | SRR6046020 | Other | lineage3 | None | SRR5818389 | Other | None | SRR3675256 | Other | lineage4.7 | None | ERR171142 | Other | lineage4.9;lineage3.1.1 | None | SRR5818421 | Sensitive | None | SRR5818404 | Other | None | SRR8651633 | Pre-XDR-TB | lineage4.4.2 | None | SRR5818411 | MDR-TB | None | SRR5818448 | Other | None | SRR5818398 | Other | None | SRR5818405 | Sensitive | None | SRR5007161 | RR-TB | lineage4.1.1 | None | SRR5818424 | Sensitive | None | SRR5818441 | Other | None | SRR5818437 | MDR-TB | None | SRR5818455 | Sensitive | None | SRR5818458 | Other | None | SRR5818387 | Sensitive | None | ERR2446154 | Sensitive | lineage4.4.1.1 | nl | SRR5818425 | Other | None | SRR5818396 | Other | None | SRR6044904 | Other | lineage3 | None | SRR5818442 | Other | None | DRR185000 | Other | lineage1.1.1.1 | None | SRR5818408 | Other | None | ERR3275615 | Sensitive | lineage4.4.1.1 | nl | ERR4821679 | Other | lineage4.3.3 | None | ERR2432997 | Other | lineage4.8 | None | SRR5818409 | Other | None | SRR3675261 | Other | lineage1.2.1.1 | None | ERR4815502 | Other | lineage4.1 | None | ERR4821222 | Other | lineage4.3.2.1 | None | SRR5818385 | Other | None | SRR5818427 | HR-TB | None | SRR5818459 | Other | None | SRR5818452 | Other | None | SRR6046442 | Other | lineage3 | None | SRR5818445 | Other | None | ERR323044 | HR-TB | lineage4.3.4.2.1 | None | SRR5818397 | Other | None | ERR11043121 | MDR-TB | lineage4.6.5 | None | ERR2984792 | Pre-XDR-TB | lineage4.3.4.1 | None | SRR6046739 | Other | lineage1.1.2 | None | ERR4821288 | Other | lineage4.7 | None | SRR6046607 | Other | lineage3 | None | SRR1019127 | Other | lineage4.9;lineage2.2 | None | SRR11342683 | Other | lineage4.1.2 | None | SRR5818393 | Other | lineage4.9 | None | SRR5818417 | Sensitive | lineage4.9 | None | SRR6044936 | Other | lineage4 | None | ERR4811101 | Other | lineage4.4.2 | None | ERR4819706 | MDR-TB | lineage4.3.4.2 | None | SRR16156804 | RR-TB | lineage4.9 | None | SRR18213721 | Other | lineage4.8 | None | SRR5007163 | MDR-TB | lineage4;lineage3 | None | SRR5818394 | Other | lineage4.9 | None | SRR6045664 | Other | lineage4.2.1 | None | SRR7131149 | Pre-XDR-TB | lineage4.8 | None | SRR6046815 | Other | lineage3 | None | SRR6046848 | Other | lineage4.6.5 | None | ERR4820265 | Other | lineage4.1.2.1 | None | SRR7645906 | Other | lineage2.2.1 | None | ERR2510804 | Other | lineage2.2.1 | None | SRR9971114 | Other | lineage2.2.1 | None | ERR10219876 | Other | lineage4.3.4.2 | None | ERR4816310 | HR-TB | lineage4.6.1.2 | None | ERR4819567 | Other | lineage2.2.1 | None | SRR11349147 | RR-TB | lineage4.3.2.1 | None | SRR1049581 | MDR-TB | lineage4.6.1.2 | None | ERR9117806 | Other | lineage4.8 | None | ERR9787033 | Sensitive | lineage6 | None | SRR22424778 | RR-TB | lineage2.2.1.1 | None | SRR1196478 | MDR-TB | lineage4.9 | None | SRR18002891 | MDR-TB | lineage2.2.1 | None | SRR1175473 | Other | lineage4.9 | None | SRR11972323 | RR-TB | lineage1.1.3.2 | None | SRR11972417 | MDR-TB | lineage2.2.1 | None | SRR18911231 | Sensitive | lineage4.1.1.3 | None | SRR21469201 | Other | La1.7.1 | None | SRR5818432 | MDR-TB | lineage4.9 | None | SRR6045384 | Other | lineage4.1.2 | None | SRR6044784 | MDR-TB | lineage3 | None | SRR5818440 | Other | lineage4.9 | None | ERR10796565 | RR-TB | lineage4.9 | None | SRR6982246 | Sensitive | lineage4 | None | ERR4814986 | Other | lineage4.3.4.2 | None | ERR10796576 | RR-TB | lineage4.9 | None | ERR4814896 | Other | lineage2.2.1.1 | None | ERR4796351 | MDR-TB | lineage4.9 | None | ERR4819198 | Other | lineage2.2.1 | None | ERR4818126 | RR-TB | lineage1 | None | ERR4817555 | RR-TB | lineage3 | None | ERR4818646 | Sensitive | lineage4.1.2.1 | None | ERR4819528 | RR-TB | lineage3 | None | ERR4819504 | Sensitive | lineage3 | gb | ERR4828990 | RR-TB | lineage4.6.2.2 | None | ERR4819555 | Other | lineage4.8 | None | SRR10315556 | Sensitive | lineage2.2.1 | None | SRR3601585 | Pre-XDR-TB | lineage2.2 | None | SRR22424884 | Pre-XDR-TB | lineage2.2.1 | None | SRR5818422 | Other | lineage4.9 | None | SRR5818435 | Sensitive | lineage4.9 | None | SRR3619841 | Pre-XDR-TB | lineage2.2.1 | None | SRR5818395 | Sensitive | lineage4.9 | None | SRR5818456 | Other | lineage4.9 | None | SRR6045243 | Sensitive | lineage4.1.1 | gb | SRR5818460 | Other | lineage4.9 | None | SRR6044993 | Other | lineage3 | None | SRR6045613 | Other | lineage3.1.3 | None | SRR6045496 | Other | lineage6.1.3 | None | SRR6046275 | Other | lineage3.1.1 | None | ERR2513681 | Other | lineage1.1.2 | None | SRR6046616 | Other | lineage4.3.1.1 | None | ERR037504 | Other | lineage4.9.1 | None | ERR108125 | Pre-XDR-TB | lineage4.9 | None | ERR176580 | Sensitive | lineage4.3.4.2.1 | None | ERR2027290 | RR-TB | lineage3.1 | None | ERR3324368 | RR-TB | lineage6.2.3;lineage1.1.2 | None | ERR3275941 | RR-TB | lineage4.3 | nl | ERR4818522 | Pre-XDR-TB | lineage3 | None | ERR4818691 | Other | lineage4.8 | None | ERR4819324 | Other | lineage4.8 | gb | ERR4821773 | Other | La1.6 | None | SRR1175491 | MDR-TB | lineage4 | None | ERR4821887 | Other | lineage4.1.2.1 | None | ERR9117740 | Other | lineage3.1.1 | None | ERR4821812 | Other | lineage4.8 | gb | SRR1792011 | Other | La1.8.1 | None | ERR10796592 | Other | lineage4 | None | ERR10796633 | RR-TB | lineage4.3.4 | None | SRR18002932 | Pre-XDR-TB | lineage2.2.1 | None | SRR18003049 | Other | lineage2.2.1 | None | ERR10796578 | Other | lineage2.2.1 | None | ERR10796629 | Other | lineage4 | None | ERR10796571 | Other | lineage4.9 | None | ERR10796577 | RR-TB | lineage4.9 | None | ERR10796591 | MDR-TB | lineage4.9 | None | SRR5818414 | Other | None | SRR5818428 | Sensitive | None | ERR4819011 | Other | lineage3.1.2.1 | None | ERR4815452 | Other | lineage4.3.3 | None | SRR5818430 | Sensitive | None | SRR5818470 | Other | None | SRR6046246 | Other | lineage3 | None | SRR5818388 | Other | None | SRR5007167 | RR-TB | lineage4.1.1.3.1 | None | ERR4819007 | Other | lineage2.2.1 | None | SRR6046716 | Other | lineage3 | gb | SRR5818463 | Sensitive | None |
|---|
