EBG00000313325 - n.534T>C


Drug resistance types
30 Sensitive 21 RR-TB 6 HR-TB 19 MDR-TB 10 Pre-XDR-TB 0 XDR-TB 111 Other
lineage Counts
lineage Count
lineage4.3.3 3
lineage4 6
47
lineage3 17
lineage4.8 12
lineage4.6.1.1 3
lineage2.2.2 1
lineage4.3.4.2.1 5
lineage1.1.1.1 2
lineage2.2.1 16
lineage4.4.1.1 3
lineage4.3.1.1 2
lineage4.6.2.2 2
lineage2.2.1.1 3
lineage1 2
lineage4.6.1.2 3
lineage4.1.2.1 5
lineage4.4.1.2 1
lineage3.1.2 1
lineage5.1.1 1
lineage4.7 2
lineage4.9;lineage3.1.1 1
lineage4.4.2 2
lineage4.1.1 2
lineage1.2.1.1 1
lineage4.1 1
lineage4.3.2.1 2
lineage4.6.5 2
lineage4.3.4.1 1
lineage1.1.2 2
lineage4.9;lineage2.2 1
lineage4.1.2 2
lineage4.9 20
lineage4.3.4.2 3
lineage4;lineage3 1
lineage4.2.1 1
lineage6 1
lineage1.1.3.2 1
lineage4.1.1.3 1
La1.7.1 1
lineage2.2 1
lineage3.1.3 1
lineage6.1.3 1
lineage3.1.1 2
lineage4.9.1 1
lineage3.1 1
lineage6.2.3;lineage1.1.2 1
lineage4.3 1
La1.6 1
La1.8.1 1
lineage4.3.4 1
lineage3.1.2.1 1
lineage4.1.1.3.1 1
spoligotype Counts
spoligotype Count
None 197
Geographic prevalence
Country level data for this variant is available for 15 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR4819579 HR-TB lineage4.3.3 None
SRR3675565 Other lineage4 None
SRR5818446 Other None
SRR5818462 Other None
SRR5818439 Sensitive None
SRR6046291 Other lineage3 None
SRR5818449 MDR-TB None
SRR6046208 Other lineage4.8 None
SAMEA3501073 RR-TB lineage4.8 None
SRR5818419 Sensitive None
SRR5818469 Other None
SRR5818402 Other None
SRR5818429 Sensitive None
ERR1198990 Other lineage4.6.1.1 ug
SRR4033523 Other lineage2.2.2 None
SRR5818666 Other lineage3 None
ERR4820019 Other lineage4.3.4.2.1 None
SRR6046612 Other lineage1.1.1.1 None
ERR2513405 Other lineage2.2.1 None
SRR3675230 RR-TB lineage3 None
SRR5818399 Sensitive None
ERR4818851 RR-TB lineage4.4.1.1 None
SRR5818453 Sensitive None
SRR6045805 Other lineage4.3.1.1 None
ERR4816129 HR-TB lineage4.6.2.2 gb
SRR5818647 RR-TB lineage4.3.4.2.1 None
SRR5818423 MDR-TB None
ERR2229198 MDR-TB lineage4.8 None
SRR5818436 Sensitive None
ERR4831863 HR-TB lineage2.2.1.1 None
SRR8651566 Pre-XDR-TB lineage2.2.1 None
ERR4818988 Other lineage1 None
SRR5818386 Other None
SRR5818457 Other None
SRR5818426 Other None
SRR5818410 Sensitive None
ERR245801 Other lineage4.3.4.2.1 None
ERR4820188 Other lineage3 gb
SAMN02380990 MDR-TB lineage4.6.1.2 None
ERR1199057 Other lineage4.6.1.1 ug
ERR4821769 Other lineage4.1.2.1 None
ERR4816270 Other lineage4.1.2.1 None
ERR4818043 Sensitive lineage4.8 gb
SRR5818413 Sensitive None
SRR6045616 Other lineage4.4.1.2 gb
SRR6046177 Other lineage3.1.2 None
ERR1199064 Other lineage4.6.1.1 ug
ERR502517 MDR-TB lineage5.1.1 None
SRR6046020 Other lineage3 None
SRR5818389 Other None
SRR3675256 Other lineage4.7 None
ERR171142 Other lineage4.9;lineage3.1.1 None
SRR5818421 Sensitive None
SRR5818404 Other None
SRR8651633 Pre-XDR-TB lineage4.4.2 None
SRR5818411 MDR-TB None
SRR5818448 Other None
SRR5818398 Other None
SRR5818405 Sensitive None
SRR5007161 RR-TB lineage4.1.1 None
SRR5818424 Sensitive None
SRR5818441 Other None
SRR5818437 MDR-TB None
SRR5818455 Sensitive None
SRR5818458 Other None
SRR5818387 Sensitive None
ERR2446154 Sensitive lineage4.4.1.1 nl
SRR5818425 Other None
SRR5818396 Other None
SRR6044904 Other lineage3 None
SRR5818442 Other None
DRR185000 Other lineage1.1.1.1 None
SRR5818408 Other None
ERR3275615 Sensitive lineage4.4.1.1 nl
ERR4821679 Other lineage4.3.3 None
ERR2432997 Other lineage4.8 None
SRR5818409 Other None
SRR3675261 Other lineage1.2.1.1 None
ERR4815502 Other lineage4.1 None
ERR4821222 Other lineage4.3.2.1 None
SRR5818385 Other None
SRR5818427 HR-TB None
SRR5818459 Other None
SRR5818452 Other None
SRR6046442 Other lineage3 None
SRR5818445 Other None
ERR323044 HR-TB lineage4.3.4.2.1 None
SRR5818397 Other None
ERR11043121 MDR-TB lineage4.6.5 None
ERR2984792 Pre-XDR-TB lineage4.3.4.1 None
SRR6046739 Other lineage1.1.2 None
ERR4821288 Other lineage4.7 None
SRR6046607 Other lineage3 None
SRR1019127 Other lineage4.9;lineage2.2 None
SRR11342683 Other lineage4.1.2 None
SRR5818393 Other lineage4.9 None
SRR5818417 Sensitive lineage4.9 None
SRR6044936 Other lineage4 None
ERR4811101 Other lineage4.4.2 None
ERR4819706 MDR-TB lineage4.3.4.2 None
SRR16156804 RR-TB lineage4.9 None
SRR18213721 Other lineage4.8 None
SRR5007163 MDR-TB lineage4;lineage3 None
SRR5818394 Other lineage4.9 None
SRR6045664 Other lineage4.2.1 None
SRR7131149 Pre-XDR-TB lineage4.8 None
SRR6046815 Other lineage3 None
SRR6046848 Other lineage4.6.5 None
ERR4820265 Other lineage4.1.2.1 None
SRR7645906 Other lineage2.2.1 None
ERR2510804 Other lineage2.2.1 None
SRR9971114 Other lineage2.2.1 None
ERR10219876 Other lineage4.3.4.2 None
ERR4816310 HR-TB lineage4.6.1.2 None
ERR4819567 Other lineage2.2.1 None
SRR11349147 RR-TB lineage4.3.2.1 None
SRR1049581 MDR-TB lineage4.6.1.2 None
ERR9117806 Other lineage4.8 None
ERR9787033 Sensitive lineage6 None
SRR22424778 RR-TB lineage2.2.1.1 None
SRR1196478 MDR-TB lineage4.9 None
SRR18002891 MDR-TB lineage2.2.1 None
SRR1175473 Other lineage4.9 None
SRR11972323 RR-TB lineage1.1.3.2 None
SRR11972417 MDR-TB lineage2.2.1 None
SRR18911231 Sensitive lineage4.1.1.3 None
SRR21469201 Other La1.7.1 None
SRR5818432 MDR-TB lineage4.9 None
SRR6045384 Other lineage4.1.2 None
SRR6044784 MDR-TB lineage3 None
SRR5818440 Other lineage4.9 None
ERR10796565 RR-TB lineage4.9 None
SRR6982246 Sensitive lineage4 None
ERR4814986 Other lineage4.3.4.2 None
ERR10796576 RR-TB lineage4.9 None
ERR4814896 Other lineage2.2.1.1 None
ERR4796351 MDR-TB lineage4.9 None
ERR4819198 Other lineage2.2.1 None
ERR4818126 RR-TB lineage1 None
ERR4817555 RR-TB lineage3 None
ERR4818646 Sensitive lineage4.1.2.1 None
ERR4819528 RR-TB lineage3 None
ERR4819504 Sensitive lineage3 gb
ERR4828990 RR-TB lineage4.6.2.2 None
ERR4819555 Other lineage4.8 None
SRR10315556 Sensitive lineage2.2.1 None
SRR3601585 Pre-XDR-TB lineage2.2 None
SRR22424884 Pre-XDR-TB lineage2.2.1 None
SRR5818422 Other lineage4.9 None
SRR5818435 Sensitive lineage4.9 None
SRR3619841 Pre-XDR-TB lineage2.2.1 None
SRR5818395 Sensitive lineage4.9 None
SRR5818456 Other lineage4.9 None
SRR6045243 Sensitive lineage4.1.1 gb
SRR5818460 Other lineage4.9 None
SRR6044993 Other lineage3 None
SRR6045613 Other lineage3.1.3 None
SRR6045496 Other lineage6.1.3 None
SRR6046275 Other lineage3.1.1 None
ERR2513681 Other lineage1.1.2 None
SRR6046616 Other lineage4.3.1.1 None
ERR037504 Other lineage4.9.1 None
ERR108125 Pre-XDR-TB lineage4.9 None
ERR176580 Sensitive lineage4.3.4.2.1 None
ERR2027290 RR-TB lineage3.1 None
ERR3324368 RR-TB lineage6.2.3;lineage1.1.2 None
ERR3275941 RR-TB lineage4.3 nl
ERR4818522 Pre-XDR-TB lineage3 None
ERR4818691 Other lineage4.8 None
ERR4819324 Other lineage4.8 gb
ERR4821773 Other La1.6 None
SRR1175491 MDR-TB lineage4 None
ERR4821887 Other lineage4.1.2.1 None
ERR9117740 Other lineage3.1.1 None
ERR4821812 Other lineage4.8 gb
SRR1792011 Other La1.8.1 None
ERR10796592 Other lineage4 None
ERR10796633 RR-TB lineage4.3.4 None
SRR18002932 Pre-XDR-TB lineage2.2.1 None
SRR18003049 Other lineage2.2.1 None
ERR10796578 Other lineage2.2.1 None
ERR10796629 Other lineage4 None
ERR10796571 Other lineage4.9 None
ERR10796577 RR-TB lineage4.9 None
ERR10796591 MDR-TB lineage4.9 None
SRR5818414 Other None
SRR5818428 Sensitive None
ERR4819011 Other lineage3.1.2.1 None
ERR4815452 Other lineage4.3.3 None
SRR5818430 Sensitive None
SRR5818470 Other None
SRR6046246 Other lineage3 None
SRR5818388 Other None
SRR5007167 RR-TB lineage4.1.1.3.1 None
ERR4819007 Other lineage2.2.1 None
SRR6046716 Other lineage3 gb
SRR5818463 Sensitive None