Rv0668 - c.1509C>G


Drug resistance types
54 Sensitive 22 RR-TB 110 HR-TB 49 MDR-TB 10 Pre-XDR-TB 0 XDR-TB 123 Other
lineage Counts
lineage Count
La1.7;lineage3.1;lineage4 1
lineage4.9 185
lineage1;lineage4.9 1
lineage2.2.1 20
lineage4.3.2.1 3
lineage4.1.2.1 5
La3;lineage4.9 8
lineage4 5
lineage1.2.1.2 1
lineage2.2 4
lineage4.8 8
lineage1.1.2 2
lineage4.2.1 1
lineage2.1;lineage4.9 1
M.canetti;lineage2.1;lineage4.9 16
M.canetti;lineage2.1;lineage4.1.4;lineage4.3.1;lineage4.9 1
lineage4.6.2.2 2
lineage4.3.3 2
La1.4 1
lineage6.1.2 1
La1.7;lineage4.9 6
lineage3;lineage4.9 1
lineage3 11
3
La3;M.canetti;lineage4.9 2
La1;lineage4.9 3
lineage4.1.1.1 1
lineage4.3.4 1
lineage2.1;lineage2.2;lineage6.3 1
lineage4.8;lineage4.9 2
lineage4.4.1.1 2
La1.8.1 6
lineage1.1.1 1
lineage4.3.4.2.1 5
La1.6;La3;M.canetti;lineage4.6.4;lineage4.9 1
M.canetti;lineage2.2 1
La1;lineage2;lineage4.9 1
lineage6.1.3 1
La1.6;La3;lineage4.6.4;lineage4.8.1;lineage4.9 1
La1.3 1
La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 4
La1.7.1;La1.7.X-unk4 1
M.canetti;lineage2.1;lineage4.9;lineage6.3 4
lineage4.5 2
M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 1
lineage4.3.1;lineage4.9;lineage6 1
lineage4.3.3;lineage4.9 1
La1.7.1;La1.7.X-unk4;lineage7 1
lineage2.2.1.2 2
La1;lineage4.1.2 1
lineage4.1;lineage4.9 1
lineage5.1.2 1
M.canetti;lineage2.1;lineage4.3.1;lineage4.9 1
La1.2.BCG 1
lineage4.1.1.2 1
La1.2 1
M.canetti;lineage2.1;lineage4 1
La1.7;lineage4.9;lineage7 1
M.canetti;lineage4.3.1;lineage4.9 1
La1.6;La3;M.canetti;lineage2.1;lineage4.9 1
lineage4.1.1.3 1
lineage2.2.1.2;lineage7 1
lineage4.9;lineage7 2
La1.7.1;lineage4.9 1
La1.6;La3;M.canetti;lineage4.8.1;lineage4.9 1
lineage1.2.2.2 1
lineage1.1 1
La1.7.1 1
La3;lineage4 1
lineage4.4.2 1
lineage1.1.3.1 1
La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9 1
M.canetti;lineage2.1;lineage4.1.4;lineage4.9 1
La2;lineage2.2 1
lineage4.1.2 1
La1.6;La3;lineage4.9 1
La1.6;La3;lineage4.6.4;lineage4.9 1
La2;lineage4.9 1
lineage4.9;lineage6.1.3 1
La1.2;La1.8.1 1
spoligotype Counts
spoligotype Count
None 368
Geographic prevalence
Country level data for this variant is available for 1 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR405219 HR-TB La1.7;lineage3.1;lineage4 None
ERR323066 HR-TB lineage4.9 None
SRR11662694 Other lineage4.9 None
ERR323045 HR-TB lineage1;lineage4.9 None
SRR5341308 HR-TB lineage4.9 None
ERR926160 Other lineage4.9 None
SRR10315567 HR-TB lineage2.2.1 None
SRR5341461 HR-TB lineage4.9 None
SRR9970981 RR-TB lineage4.3.2.1 None
ERR349264 Other lineage4.9 None
ERR2041726 MDR-TB lineage4.1.2.1 None
ERR4814639 HR-TB lineage4.9 None
ERR323062 HR-TB lineage4.9 None
ERR3283047 Sensitive La3;lineage4.9 None
ERR3273109 HR-TB lineage4 None
SRR20969475 Other lineage1.2.1.2 None
ERR2446566 Other lineage4.9 None
ERR363498 Other lineage4.9 None
SRR6046210 Other lineage4.9 None
SRR3675585 HR-TB lineage4.9 None
ERR4799513 HR-TB lineage2.2 None
ERR926163 Other lineage4.9 None
SRR5341387 Other lineage4.9 None
ERR751326 Other lineage4.9 None
ERR2229143 RR-TB lineage4.9 None
ERR4829530 Pre-XDR-TB lineage4.8 None
ERR4815471 HR-TB lineage4.9 None
ERR926159 Sensitive lineage4.9 None
ERR108471 HR-TB lineage4.9 None
ERR4797193 HR-TB lineage1.1.2 None
SRR1172885 HR-TB lineage4.9 None
SRR14802079 MDR-TB lineage4.2.1 None
ERR3797081 Sensitive lineage4.9 None
ERR3468544 RR-TB lineage2.1;lineage4.9 None
SRR9971112 HR-TB lineage2.2.1 None
SRR10809074 HR-TB lineage4.9 None
SRR3618864 Pre-XDR-TB lineage2.2.1 None
ERR3797064 Other La3;lineage4.9 None
SRR6044815 RR-TB lineage4.9 None
ERR3797047 MDR-TB lineage4.9 None
ERR363453 Other lineage4.9 None
SRR5341455 Sensitive lineage4.9 None
ERR363447 Other lineage4.9 None
SRR1158918 Other lineage4.9 None
SRR12708392 Other lineage2.2.1 None
SRR3675494 RR-TB lineage4.9 None
ERR369156 Sensitive lineage4.9 None
ERR5311102 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR373947 Other lineage4.9 None
SRR5341467 Other lineage4.9 None
ERR3283017 MDR-TB M.canetti;lineage2.1;lineage4.1.4;lineage4.3.1;lineage4.9 None
SRR1173777 Sensitive lineage4.9 None
ERR4819809 HR-TB lineage4.6.2.2 None
SRR11349186 MDR-TB lineage4.3.3 None
ERR4188350 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR16278274 Other La1.4 None
ERR212125 HR-TB lineage4.9 None
ERR9787030 RR-TB lineage6.1.2 None
ERR216938 HR-TB La1.7;lineage4.9 None
SRR5341396 Other lineage3;lineage4.9 None
ERR4796929 Sensitive lineage4.9 None
ERR4818110 Sensitive lineage4.9 None
SRR5341412 Pre-XDR-TB lineage3 None
ERR363479 Other lineage4.9 None
ERR473334 HR-TB lineage4.9 None
ERR369159 Other lineage4.9 None
ERR363446 Other lineage4.9 None
ERR3283025 MDR-TB La1.7;lineage4.9 None
SRR6045359 HR-TB lineage4.9 None
ERR4796577 HR-TB None
ERR234659 HR-TB None
SRR28044634 Other lineage3 None
ERR349300 Other lineage4.9 None
ERR6866807 RR-TB lineage4.9 None
ERR137286 Other lineage4.9 None
ERR6358979 HR-TB lineage4.9 None
ERR2693229 RR-TB La3;M.canetti;lineage4.9 None
ERR4769497 Other La1;lineage4.9 None
ERR4816113 Sensitive lineage4.1.1.1 None
ERR363449 Other lineage4.9 None
ERR4817998 Other lineage3 None
ERR176651 Other lineage4.9 None
ERR4769417 Pre-XDR-TB lineage4.9 None
SRR12708418 HR-TB lineage2.2.1 None
ERR736817 HR-TB lineage4.3.4 None
ERR8976043 MDR-TB lineage2.1;lineage2.2;lineage6.3 None
ERR4024991 HR-TB lineage4.8;lineage4.9 None
SRR6045010 Sensitive lineage4.9 None
SRR1173453 Other lineage4.4.1.1 None
ERR363421 Other lineage4.9 None
SRR1159378 Other lineage4.9 None
SRR6045217 Other lineage4.9 None
ERR349296 Sensitive lineage4.9 None
SRR11462861 Other La1.8.1 None
ERR473277 HR-TB La3;M.canetti;lineage4.9 None
SRR1791747 Other La1.8.1 None
SRR20969708 HR-TB lineage2.2 None
ERR5311101 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR6866639 HR-TB lineage4.9 None
ERR3797048 Other La3;lineage4.9 None
ERR363474 Sensitive lineage4.9 None
ERR2513229 MDR-TB lineage2.2.1 None
SRR3675561 RR-TB M.canetti;lineage2.1;lineage4.9 None
ERR4596902 MDR-TB lineage3 None
ERR3797060 Other La1.8.1 None
ERR3283031 Other La3;lineage4.9 None
ERR363506 Sensitive lineage4.9 None
ERR926162 Sensitive lineage4.9 None
ERR4819314 HR-TB lineage1.1.1 None
ERR11465628 Sensitive lineage4.3.4.2.1 None
SRR3675269 RR-TB lineage4.9 None
ERR3283024 HR-TB La1.6;La3;M.canetti;lineage4.6.4;lineage4.9 None
ERR369163 Other lineage4.9 None
ERR9119669 MDR-TB lineage4.9 None
ERR1873396 Pre-XDR-TB M.canetti;lineage2.2 None
ERR067699 HR-TB La1;lineage2;lineage4.9 None
ERR4816762 Sensitive lineage4.9 None
ERR9787256 Other lineage6.1.3 None
ERR3797023 MDR-TB La1.8.1 None
SRR3675234 HR-TB La1.6;La3;lineage4.6.4;lineage4.8.1;lineage4.9 None
SRR10315751 MDR-TB lineage4.8 None
ERR373946 Other lineage4.9 None
ERR4769521 RR-TB lineage4.9 None
ERR1063883 HR-TB lineage4.9 None
ERR4769514 Other La1.3 None
ERR3797014 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
SRR1183965 Sensitive lineage4.9 None
SRR5341310 Other lineage1.1.2 None
ERR6865502 Sensitive lineage4 None
SRR14801749 HR-TB lineage4.9 None
ERR176778 HR-TB lineage4.9 None
ERR926158 Sensitive lineage4.9 None
SRR22424787 Sensitive lineage4.9 None
ERR4816470 HR-TB lineage3 None
ERR3445503 Other La1.7.1;La1.7.X-unk4 None
SRR1175052 HR-TB lineage4.9 None
ERR3283032 Other lineage4.9 None
ERR3283011 Other La3;lineage4.9 None
ERR349299 Other lineage4.9 None
ERR1873393 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR6511621 HR-TB lineage4.9 None
SRR10808805 Other La1;lineage4.9 None
SRR3675481 MDR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR1035122 HR-TB lineage4.9 None
SRR3675235 HR-TB lineage4.9 None
ERR1023525 HR-TB La1.7;lineage4.9 None
ERR2041725 MDR-TB lineage4.1.2.1 None
ERR176779 HR-TB lineage4.9 None
ERR405209 Sensitive La1.7;lineage4.9 None
SRR5341267 Pre-XDR-TB lineage3 None
SRR14801759 MDR-TB La1.7;lineage4.9 None
ERR2693230 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
ERR4816904 Sensitive lineage4.1.2.1 None
ERR978767 RR-TB lineage4.8 None
SRR6045948 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR12708396 MDR-TB lineage4.3.2.1 None
SRR13423544 Other lineage4.5 None
ERR323108 HR-TB La1.7;lineage4.9 None
ERR3283014 Other La3;lineage4.9 None
SRR3675518 MDR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
ERR363490 Other lineage4.9 None
SRR12416842 HR-TB lineage4.9 None
SRR6044875 Other lineage4.9 None
ERR4819546 HR-TB lineage3 None
ERR926164 Other lineage4.9 None
SRR6046299 Other lineage4.3.1;lineage4.9;lineage6 None
SRR6832644 Other lineage4.3.3;lineage4.9 None
ERR3445501 HR-TB La1.7.1;La1.7.X-unk4;lineage7 None
ERR473332 Other lineage4.9 None
SRR1172796 Sensitive lineage2.2.1.2 None
SRR9970978 Other La1;lineage4.1.2 None
ERR4798431 Other lineage4.1;lineage4.9 None
ERR400538 RR-TB lineage5.1.2 None
ERR3468607 RR-TB lineage4.9 None
SRR5341425 Other lineage4.9 None
ERR502510 HR-TB lineage4.9 None
ERR363500 Other lineage4.9 None
SRR6045892 Sensitive lineage4.9 None
SRR3675243 MDR-TB lineage4.9 None
SRR3675260 Sensitive lineage4.9 None
ERR5311083 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR3675320 MDR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9 None
ERR736834 HR-TB lineage4.9 None
ERR1034634 HR-TB lineage4.9 None
SRR1915487 Other La1.2.BCG None
SRR3675209 Sensitive lineage4.9 None
ERR349266 Other lineage4.9 None
ERR971389 Other lineage4.9 None
ERR181824 MDR-TB lineage4.9 None
ERR363456 Sensitive lineage4.9 None
ERR1063896 HR-TB None
ERR752229 Other lineage4.5 None
ERR369162 Other lineage4.9 None
ERR3797029 Other lineage4.9 None
ERR4797474 Other lineage4.9 None
ERR4797264 HR-TB lineage4.9 None
ERR736872 HR-TB lineage4.9 None
ERR779852 HR-TB lineage4.9 None
ERR4810624 MDR-TB lineage2.2 None
ERR373945 Other lineage4.9 None
SRR1175127 Other lineage2.2.1.2 None
ERR4831616 MDR-TB lineage2.2.1 None
ERR4818252 HR-TB lineage4.1.1.2 None
SRR20632814 Sensitive lineage4.9 None
ERR4769427 Other La1.2 None
ERR2513724 Sensitive lineage4.3.2.1 None
ERR2693239 RR-TB M.canetti;lineage2.1;lineage4 None
ERR369157 Sensitive lineage4.9 None
SRR6046046 Other lineage4.9 None
ERR4798099 HR-TB lineage4.9 None
SRR5341298 Other lineage4.9 None
ERR363499 Other lineage4.9 None
ERR369151 Other lineage4.9 None
ERR702405 HR-TB lineage4.9 None
ERR4816964 HR-TB lineage4.9 None
ERR5311081 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR3675265 Other lineage4 None
SRR3675292 Sensitive lineage4.9 None
SRR5535933 Other lineage4.9 None
ERR3797017 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
ERR4188247 HR-TB lineage4.9 None
ERR5311100 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SAMEA3501073 RR-TB lineage4.8 None
ERR4817667 HR-TB lineage4.8 None
SRR10315466 RR-TB lineage2.2.1 None
ERR4816466 HR-TB lineage4.9 None
ERR4178309 Other lineage4.1.2.1 None
ERR5311098 MDR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR926156 Other lineage4.9 None
ERR4816322 Other lineage4.9 None
SRR7535074 Sensitive lineage3 None
SRR20969731 Other lineage2.2.1 None
SRR12142339 HR-TB lineage2.2.1 None
ERR926154 Sensitive lineage4.9 None
ERR245794 HR-TB lineage4.3.4.2.1 None
ERR736848 Other lineage4.9 None
ERR926157 Other lineage4.9 None
SRR5341422 HR-TB La1.7;lineage4.9;lineage7 None
SRR5341300 HR-TB lineage4.9 None
SRR6045548 Other lineage4.9 None
ERR067712 Sensitive lineage4.9 None
SRR3675444 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR3275709 HR-TB lineage3 nl
SRR14782054 Other lineage4.9 None
ERR181887 Other lineage4.9 None
SRR5341384 HR-TB lineage4.9 None
ERR4818561 Sensitive lineage4.9 None
SRR6046593 Other lineage4.9 None
ERR4821655 HR-TB lineage4.9 None
SRR6046897 Sensitive lineage4.9 None
ERR349330 Sensitive lineage4.9 None
SRR7236177 Other La1.8.1 None
ERR124636 HR-TB lineage4.9 None
ERR4799478 Pre-XDR-TB lineage2.2.1 None
ERR3797063 Other La3;lineage4.9 None
ERR9119138 RR-TB M.canetti;lineage4.3.1;lineage4.9 None
ERR5311096 MDR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR1063849 HR-TB lineage4.9 None
ERR1063846 HR-TB lineage4.9 None
ERR3283020 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.9 None
SRR1180996 Other lineage4.9 None
SRR6789624 HR-TB lineage4.1.1.3 None
SRR9971270 RR-TB lineage2.2.1 None
ERR1063862 HR-TB lineage4.9 None
ERR736875 HR-TB lineage4.9 None
SRR6045371 Other lineage4.9 None
SRR18549032 HR-TB lineage2.2.1.2;lineage7 None
ERR3445502 HR-TB lineage4.9;lineage7 None
SRR5431730 Other La1.8.1 None
ERR4769474 HR-TB lineage4.9 None
SRR6045706 Other lineage4.9 None
ERR323107 HR-TB lineage4.9 None
ERR4796254 Other lineage4.9 None
ERR1063858 HR-TB lineage4.9 None
ERR1063859 HR-TB La1.7.1;lineage4.9 None
ERR11465509 Sensitive lineage4.3.4.2.1 None
SRR5341453 Other lineage4.9 None
ERR978766 RR-TB lineage4.8 None
ERR6359069 HR-TB lineage4.9 None
SRR1173767 MDR-TB lineage4.4.1.1 None
ERR978767_ERR978765_ERR978766 RR-TB lineage4.8 None
ERR369160 Sensitive lineage4.9 None
ERR363445 Other lineage4.9 None
ERR133825 HR-TB La1;lineage4.9 None
ERR5311099 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR363502 Other lineage4.9 None
ERR363509 Sensitive lineage4.9 None
SRR19295647 HR-TB lineage4.9 None
SRR6044876 Sensitive lineage4.9 None
SRR14782405 HR-TB lineage4.9 None
SRR3675246 Other lineage4.9 None
ERR4178226 Sensitive lineage4 None
ERR2693257 HR-TB La1.6;La3;M.canetti;lineage4.8.1;lineage4.9 None
SRR3619841 Pre-XDR-TB lineage2.2.1 None
ERR4831117 HR-TB lineage4.9;lineage7 None
ERR4797184 HR-TB lineage4.9 None
ERR3797046 HR-TB lineage4.9 None
ERR4797201 Other lineage1.2.2.2 None
SRR6044835 Other lineage4.9 None
ERR11465511 Other lineage4.3.4.2.1 None
ERR3283057 Sensitive La3;lineage4.9 None
ERR5311090 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR6865513 Other lineage4.1.2.1 None
ERR3077978 RR-TB lineage1.1 None
ERR6866022 HR-TB lineage4.8;lineage4.9 None
ERR6359082 Other lineage4.9 None
SRR5341299 HR-TB lineage4.9 None
SRR7240492 MDR-TB La1.7.1 None
ERR926155 Other lineage4.9 None
ERR3283021 MDR-TB lineage4.9 None
ERR4815815 Sensitive lineage4.9 None
SRR6045503 Other lineage4.9 None
SRR11662690 HR-TB lineage4.9 None
SRR5341469 HR-TB lineage4.9 None
SRR5341456 Other lineage4.9 None
ERR4811493 HR-TB lineage4.9 None
ERR926161 Sensitive lineage4.9 None
SRR20970016 Other lineage2.2 None
ERR736856 HR-TB lineage4.9 None
ERR4831620 MDR-TB lineage2.2.1 None
ERR502511 HR-TB lineage4.9 None
ERR3283028 Other La3;lineage4 None
DRR188519 Other lineage4.4.2 None
ERR8479578 HR-TB lineage1.1.3.1 None
ERR9786597 Other lineage4.6.2.2 None
SRR6045795 Other lineage2.2.1 None
ERR4188342 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR4819051 Sensitive lineage4.9 None
ERR4818710 Sensitive lineage4.9 None
ERR1035239 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR9971114 Other lineage2.2.1 None
ERR3797044 Other La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9 None
ERR6359070 Sensitive lineage4.9 None
ERR369158 Other lineage4.9 None
ERR2693252 HR-TB lineage4.9 None
SRR6046492 Other lineage4.9 None
ERR3797079 Sensitive lineage4.9 None
SRR3675322 MDR-TB M.canetti;lineage2.1;lineage4.1.4;lineage4.9 None
ERR1063839 MDR-TB La2;lineage2.2 None
ERR2693245 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
SRR11972425 Pre-XDR-TB lineage2.2.1 None
ERR3283055 HR-TB lineage4.9 None
SRR9970980 HR-TB lineage4.1.2 None
SRR9971041 MDR-TB lineage4.3.3 None
ERR926165 Other lineage4.9 None
ERR6866410 HR-TB lineage4.9 None
SRR7535082 Other lineage4.9 None
SRR5341341 Pre-XDR-TB lineage2.2.1 None
ERR2513259 Other lineage3 None
SRR7535053 Sensitive lineage3 None
ERR3797061 Other La1.6;La3;lineage4.9 None
ERR4831617 MDR-TB lineage2.2.1 None
ERR176518 Sensitive lineage4.3.4.2.1 None
ERR2693231 HR-TB La1.6;La3;lineage4.6.4;lineage4.9 None
ERR4799547 HR-TB lineage2.2.1 None
ERR4799025 Other lineage4.8 None
ERR323115 Sensitive lineage4.9 None
ERR1063857 MDR-TB La2;lineage4.9 None
ERR369161 Sensitive lineage4.9 None
ERR3797016 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR349265 Other lineage4.9 None
SRR16156817 Other lineage4.9 None
ERR363426 Sensitive lineage4.9 None
ERR176658 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR4798823 HR-TB lineage4 None
ERR3445504 Other lineage4.9;lineage6.1.3 None
ERR5311078 MDR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR7240033 Other La1.2;La1.8.1 None