Rv0668 - c.1509C>G


Drug resistance types
54 Sensitive 22 RR-TB 110 HR-TB 49 MDR-TB 10 Pre-XDR-TB 0 XDR-TB 123 Other
lineage Counts
lineage Count
3
lineage4.9 185
M.canetti;lineage2.1;lineage4.9 16
lineage2.2 4
lineage4.1.1.2 1
La1.2 1
lineage4.3.2.1 3
La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9 1
La2;lineage2.2 1
La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 4
La3;M.canetti;lineage4.9 2
La3;lineage4.9 8
La1.8.1 6
lineage2.2.1 20
La1.6;La3;lineage4.9 1
lineage4.3.4.2.1 5
lineage4 5
lineage4.9;lineage6.1.3 1
La1.7;lineage3.1;lineage4 1
La1.6;La3;M.canetti;lineage2.1;lineage4.9 1
M.canetti;lineage2.1;lineage4.9;lineage6.3 4
lineage4.9;lineage7 2
lineage3 11
lineage1.1.2 2
lineage4.8 8
lineage4.2.1 1
lineage2.1;lineage4.9 1
M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 1
lineage4.4.1.1 2
La1.7.1;La1.7.X-unk4;lineage7 1
La1.6;La3;M.canetti;lineage4.8.1;lineage4.9 1
lineage4.1;lineage4.9 1
M.canetti;lineage2.1;lineage4.1.4;lineage4.3.1;lineage4.9 1
lineage5.1.2 1
lineage4.6.2.2 2
lineage4.8;lineage4.9 2
La3;lineage4 1
lineage4.5 2
lineage2.2.1.2 2
lineage4.1.2 1
lineage4.3.3 2
La1.6;La3;lineage4.6.4;lineage4.8.1;lineage4.9 1
La1.7.1;La1.7.X-unk4 1
M.canetti;lineage4.3.1;lineage4.9 1
lineage4.1.1.3 1
lineage4.1.2.1 5
lineage1.2.1.2 1
La1.7;lineage4.9 6
lineage2.2.1.2;lineage7 1
lineage4.3.3;lineage4.9 1
La1;lineage4.1.2 1
lineage6.1.2 1
lineage3;lineage4.9 1
La1.7.1 1
lineage4.4.2 1
La1;lineage4.9 3
lineage4.1.1.1 1
lineage4.3.4 1
lineage2.1;lineage2.2;lineage6.3 1
M.canetti;lineage2.1;lineage4 1
M.canetti;lineage2.1;lineage4.1.4;lineage4.9 1
lineage1.1.1 1
La1.7;lineage4.9;lineage7 1
La1.6;La3;lineage4.6.4;lineage4.9 1
La1.6;La3;M.canetti;lineage4.6.4;lineage4.9 1
M.canetti;lineage2.2 1
La2;lineage4.9 1
La1;lineage2;lineage4.9 1
lineage6.1.3 1
La1.3 1
La1.2;La1.8.1 1
lineage1;lineage4.9 1
La1.7.1;lineage4.9 1
lineage4.3.1;lineage4.9;lineage6 1
lineage1.2.2.2 1
La1.4 1
M.canetti;lineage2.1;lineage4.3.1;lineage4.9 1
lineage1.1 1
La1.2.BCG 1
lineage1.1.3.1 1
spoligotype Counts
spoligotype Count
None 368
Geographic prevalence
Country level data for this variant is available for 1 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR1063896 HR-TB None
ERR349300 Other lineage4.9 None
ERR6866807 RR-TB lineage4.9 None
ERR4797474 Other lineage4.9 None
ERR1035239 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR363449 Other lineage4.9 None
ERR4797264 HR-TB lineage4.9 None
ERR4810624 MDR-TB lineage2.2 None
ERR373945 Other lineage4.9 None
ERR4818252 HR-TB lineage4.1.1.2 None
ERR4769427 Other La1.2 None
ERR2513724 Sensitive lineage4.3.2.1 None
ERR3797044 Other La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9 None
SRR6045010 Sensitive lineage4.9 None
ERR363499 Other lineage4.9 None
ERR369158 Other lineage4.9 None
ERR3797079 Sensitive lineage4.9 None
ERR1063839 MDR-TB La2;lineage2.2 None
ERR5311081 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR1159378 Other lineage4.9 None
SRR6045217 Other lineage4.9 None
SRR3675292 Sensitive lineage4.9 None
ERR349296 Sensitive lineage4.9 None
SRR5535933 Other lineage4.9 None
ERR2693245 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
ERR473277 HR-TB La3;M.canetti;lineage4.9 None
ERR5311100 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR6866639 HR-TB lineage4.9 None
ERR3797048 Other La3;lineage4.9 None
ERR3797060 Other La1.8.1 None
SRR5341341 Pre-XDR-TB lineage2.2.1 None
ERR3797061 Other La1.6;La3;lineage4.9 None
ERR11465628 Sensitive lineage4.3.4.2.1 None
ERR926157 Other lineage4.9 None
ERR4799547 HR-TB lineage2.2.1 None
SRR6045548 Other lineage4.9 None
ERR067712 Sensitive lineage4.9 None
ERR323115 Sensitive lineage4.9 None
ERR4816762 Sensitive lineage4.9 None
SRR14782054 Other lineage4.9 None
ERR373946 Other lineage4.9 None
ERR4769521 RR-TB lineage4.9 None
ERR3797014 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
SRR6046593 Other lineage4.9 None
ERR4798823 HR-TB lineage4 None
ERR4821655 HR-TB lineage4.9 None
ERR3445504 Other lineage4.9;lineage6.1.3 None
ERR6865502 Sensitive lineage4 None
ERR405219 HR-TB La1.7;lineage3.1;lineage4 None
ERR176778 HR-TB lineage4.9 None
ERR3797063 Other La3;lineage4.9 None
SRR1175052 HR-TB lineage4.9 None
ERR3283032 Other lineage4.9 None
SRR9970981 RR-TB lineage4.3.2.1 None
ERR3283020 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.9 None
SRR3675481 MDR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR4814639 HR-TB lineage4.9 None
ERR1035122 HR-TB lineage4.9 None
ERR323062 HR-TB lineage4.9 None
SRR3675585 HR-TB lineage4.9 None
ERR2229143 RR-TB lineage4.9 None
ERR3445502 HR-TB lineage4.9;lineage7 None
ERR4815471 HR-TB lineage4.9 None
SRR5431730 Other La1.8.1 None
SRR5341267 Pre-XDR-TB lineage3 None
SRR6045706 Other lineage4.9 None
ERR4797193 HR-TB lineage1.1.2 None
ERR978767 RR-TB lineage4.8 None
SRR1172885 HR-TB lineage4.9 None
SRR6045948 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR14802079 MDR-TB lineage4.2.1 None
SRR12708396 MDR-TB lineage4.3.2.1 None
ERR3797081 Sensitive lineage4.9 None
ERR3468544 RR-TB lineage2.1;lineage4.9 None
SRR9971112 HR-TB lineage2.2.1 None
SRR5341453 Other lineage4.9 None
ERR3797064 Other La3;lineage4.9 None
ERR6359069 HR-TB lineage4.9 None
SRR3675518 MDR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
SRR1173767 MDR-TB lineage4.4.1.1 None
ERR363490 Other lineage4.9 None
ERR363502 Other lineage4.9 None
SRR6044815 RR-TB lineage4.9 None
ERR363509 Sensitive lineage4.9 None
SRR6044876 Sensitive lineage4.9 None
ERR3445501 HR-TB La1.7.1;La1.7.X-unk4;lineage7 None
ERR2693257 HR-TB La1.6;La3;M.canetti;lineage4.8.1;lineage4.9 None
ERR4797184 HR-TB lineage4.9 None
ERR4798431 Other lineage4.1;lineage4.9 None
ERR3283017 MDR-TB M.canetti;lineage2.1;lineage4.1.4;lineage4.3.1;lineage4.9 None
SRR1173777 Sensitive lineage4.9 None
ERR400538 RR-TB lineage5.1.2 None
ERR3468607 RR-TB lineage4.9 None
ERR4819809 HR-TB lineage4.6.2.2 None
ERR212125 HR-TB lineage4.9 None
SRR3675243 MDR-TB lineage4.9 None
SRR3675260 Sensitive lineage4.9 None
ERR6866022 HR-TB lineage4.8;lineage4.9 None
ERR4811493 HR-TB lineage4.9 None
SRR20970016 Other lineage2.2 None
ERR736856 HR-TB lineage4.9 None
ERR502511 HR-TB lineage4.9 None
ERR3283028 Other La3;lineage4 None
ERR971389 Other lineage4.9 None
SRR6045795 Other lineage2.2.1 None
ERR137286 Other lineage4.9 None
ERR752229 Other lineage4.5 None
ERR4188342 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR4819051 Sensitive lineage4.9 None
ERR4818710 Sensitive lineage4.9 None
ERR779852 HR-TB lineage4.9 None
ERR4817998 Other lineage3 None
ERR176651 Other lineage4.9 None
SRR1175127 Other lineage2.2.1.2 None
ERR4024991 HR-TB lineage4.8;lineage4.9 None
ERR369157 Sensitive lineage4.9 None
ERR6359070 Sensitive lineage4.9 None
ERR4798099 HR-TB lineage4.9 None
ERR369151 Other lineage4.9 None
ERR2693252 HR-TB lineage4.9 None
ERR702405 HR-TB lineage4.9 None
SRR6046492 Other lineage4.9 None
ERR4816964 HR-TB lineage4.9 None
SRR11462861 Other La1.8.1 None
ERR3283055 HR-TB lineage4.9 None
SRR9970980 HR-TB lineage4.1.2 None
SRR9971041 MDR-TB lineage4.3.3 None
SRR1791747 Other La1.8.1 None
SRR20969708 HR-TB lineage2.2 None
ERR5311101 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR926165 Other lineage4.9 None
SAMEA3501073 RR-TB lineage4.8 None
ERR4817667 HR-TB lineage4.8 None
ERR363474 Sensitive lineage4.9 None
ERR4816466 HR-TB lineage4.9 None
SRR7535082 Other lineage4.9 None
ERR5311098 MDR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR3283031 Other La3;lineage4.9 None
SRR20969731 Other lineage2.2.1 None
SRR12142339 HR-TB lineage2.2.1 None
ERR363506 Sensitive lineage4.9 None
ERR926162 Sensitive lineage4.9 None
SRR7535053 Sensitive lineage3 None
ERR736848 Other lineage4.9 None
ERR176518 Sensitive lineage4.3.4.2.1 None
ERR3797016 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR3675234 HR-TB La1.6;La3;lineage4.6.4;lineage4.8.1;lineage4.9 None
ERR4818561 Sensitive lineage4.9 None
ERR349265 Other lineage4.9 None
ERR1063883 HR-TB lineage4.9 None
SRR5341310 Other lineage1.1.2 None
SRR6046897 Sensitive lineage4.9 None
ERR5311078 MDR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR7236177 Other La1.8.1 None
ERR323066 HR-TB lineage4.9 None
ERR124636 HR-TB lineage4.9 None
ERR4799478 Pre-XDR-TB lineage2.2.1 None
SRR11662694 Other lineage4.9 None
ERR926158 Sensitive lineage4.9 None
SRR22424787 Sensitive lineage4.9 None
ERR3445503 Other La1.7.1;La1.7.X-unk4 None
ERR926160 Other lineage4.9 None
ERR9119138 RR-TB M.canetti;lineage4.3.1;lineage4.9 None
SRR10315567 HR-TB lineage2.2.1 None
ERR349299 Other lineage4.9 None
ERR1873393 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR1180996 Other lineage4.9 None
SRR6789624 HR-TB lineage4.1.1.3 None
ERR349264 Other lineage4.9 None
ERR2041726 MDR-TB lineage4.1.2.1 None
ERR1063862 HR-TB lineage4.9 None
SRR6045371 Other lineage4.9 None
ERR3273109 HR-TB lineage4 None
SRR20969475 Other lineage1.2.1.2 None
SRR6046210 Other lineage4.9 None
ERR751326 Other lineage4.9 None
SRR3675235 HR-TB lineage4.9 None
ERR1023525 HR-TB La1.7;lineage4.9 None
ERR2041725 MDR-TB lineage4.1.2.1 None
SRR18549032 HR-TB lineage2.2.1.2;lineage7 None
SRR14801759 MDR-TB La1.7;lineage4.9 None
ERR4769474 HR-TB lineage4.9 None
ERR926159 Sensitive lineage4.9 None
ERR2693230 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
ERR4796254 Other lineage4.9 None
ERR4816904 Sensitive lineage4.1.2.1 None
ERR108471 HR-TB lineage4.9 None
ERR1063858 HR-TB lineage4.9 None
ERR323108 HR-TB La1.7;lineage4.9 None
ERR978767_ERR978765_ERR978766 RR-TB lineage4.8 None
SRR12416842 HR-TB lineage4.9 None
SRR6832644 Other lineage4.3.3;lineage4.9 None
SRR3619841 Pre-XDR-TB lineage2.2.1 None
ERR473332 Other lineage4.9 None
SRR9970978 Other La1;lineage4.1.2 None
ERR4831117 HR-TB lineage4.9;lineage7 None
ERR3797046 HR-TB lineage4.9 None
ERR363447 Other lineage4.9 None
SRR1158918 Other lineage4.9 None
SRR5341425 Other lineage4.9 None
SRR11349186 MDR-TB lineage4.3.3 None
ERR9787030 RR-TB lineage6.1.2 None
ERR502510 HR-TB lineage4.9 None
ERR363500 Other lineage4.9 None
ERR3283057 Sensitive La3;lineage4.9 None
ERR216938 HR-TB La1.7;lineage4.9 None
SRR5341396 Other lineage3;lineage4.9 None
ERR6359082 Other lineage4.9 None
ERR1034634 HR-TB lineage4.9 None
ERR4796929 Sensitive lineage4.9 None
SRR5341299 HR-TB lineage4.9 None
SRR7240492 MDR-TB La1.7.1 None
ERR4818110 Sensitive lineage4.9 None
ERR926155 Other lineage4.9 None
ERR3283021 MDR-TB lineage4.9 None
ERR4815815 Sensitive lineage4.9 None
SRR3675209 Sensitive lineage4.9 None
ERR349266 Other lineage4.9 None
SRR11662690 HR-TB lineage4.9 None
ERR926161 Sensitive lineage4.9 None
ERR369159 Other lineage4.9 None
ERR4831620 MDR-TB lineage2.2.1 None
DRR188519 Other lineage4.4.2 None
ERR181824 MDR-TB lineage4.9 None
ERR4796577 HR-TB None
ERR234659 HR-TB None
SRR28044634 Other lineage3 None
ERR9786597 Other lineage4.6.2.2 None
ERR6358979 HR-TB lineage4.9 None
ERR369162 Other lineage4.9 None
ERR3797029 Other lineage4.9 None
ERR2693229 RR-TB La3;M.canetti;lineage4.9 None
ERR4769497 Other La1;lineage4.9 None
ERR4816113 Sensitive lineage4.1.1.1 None
SRR9971114 Other lineage2.2.1 None
ERR736872 HR-TB lineage4.9 None
ERR4769417 Pre-XDR-TB lineage4.9 None
SRR12708418 HR-TB lineage2.2.1 None
ERR4831616 MDR-TB lineage2.2.1 None
SRR20632814 Sensitive lineage4.9 None
ERR736817 HR-TB lineage4.3.4 None
ERR8976043 MDR-TB lineage2.1;lineage2.2;lineage6.3 None
ERR2693239 RR-TB M.canetti;lineage2.1;lineage4 None
SRR6046046 Other lineage4.9 None
SRR1173453 Other lineage4.4.1.1 None
SRR5341298 Other lineage4.9 None
ERR363421 Other lineage4.9 None
SRR3675322 MDR-TB M.canetti;lineage2.1;lineage4.1.4;lineage4.9 None
SRR3675265 Other lineage4 None
ERR3797017 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
SRR11972425 Pre-XDR-TB lineage2.2.1 None
ERR4188247 HR-TB lineage4.9 None
SRR10315466 RR-TB lineage2.2.1 None
ERR2513229 MDR-TB lineage2.2.1 None
ERR6866410 HR-TB lineage4.9 None
ERR4178309 Other lineage4.1.2.1 None
SRR3675561 RR-TB M.canetti;lineage2.1;lineage4.9 None
ERR926156 Other lineage4.9 None
ERR4816322 Other lineage4.9 None
ERR4596902 MDR-TB lineage3 None
SRR7535074 Sensitive lineage3 None
ERR2513259 Other lineage3 None
ERR4819314 HR-TB lineage1.1.1 None
ERR4831617 MDR-TB lineage2.2.1 None
ERR926154 Sensitive lineage4.9 None
ERR245794 HR-TB lineage4.3.4.2.1 None
SRR5341422 HR-TB La1.7;lineage4.9;lineage7 None
SRR3675269 RR-TB lineage4.9 None
ERR2693231 HR-TB La1.6;La3;lineage4.6.4;lineage4.9 None
ERR3283024 HR-TB La1.6;La3;M.canetti;lineage4.6.4;lineage4.9 None
SRR5341300 HR-TB lineage4.9 None
ERR369163 Other lineage4.9 None
ERR4799025 Other lineage4.8 None
SRR3675444 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR9119669 MDR-TB lineage4.9 None
ERR1873396 Pre-XDR-TB M.canetti;lineage2.2 None
ERR1063857 MDR-TB La2;lineage4.9 None
ERR369161 Sensitive lineage4.9 None
ERR067699 HR-TB La1;lineage2;lineage4.9 None
ERR3275709 HR-TB lineage3 nl
ERR9787256 Other lineage6.1.3 None
ERR181887 Other lineage4.9 None
ERR3797023 MDR-TB La1.8.1 None
SRR5341384 HR-TB lineage4.9 None
SRR10315751 MDR-TB lineage4.8 None
SRR16156817 Other lineage4.9 None
ERR363426 Sensitive lineage4.9 None
ERR4769514 Other La1.3 None
SRR1183965 Sensitive lineage4.9 None
ERR176658 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR7240033 Other La1.2;La1.8.1 None
SRR14801749 HR-TB lineage4.9 None
ERR349330 Sensitive lineage4.9 None
ERR4816470 HR-TB lineage3 None
ERR323045 HR-TB lineage1;lineage4.9 None
SRR5341308 HR-TB lineage4.9 None
ERR5311096 MDR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR3283011 Other La3;lineage4.9 None
ERR1063849 HR-TB lineage4.9 None
SRR5341461 HR-TB lineage4.9 None
ERR1063846 HR-TB lineage4.9 None
SRR6511621 HR-TB lineage4.9 None
SRR9971270 RR-TB lineage2.2.1 None
SRR10808805 Other La1;lineage4.9 None
ERR736875 HR-TB lineage4.9 None
ERR3283047 Sensitive La3;lineage4.9 None
ERR2446566 Other lineage4.9 None
ERR363498 Other lineage4.9 None
ERR4799513 HR-TB lineage2.2 None
ERR926163 Other lineage4.9 None
SRR5341387 Other lineage4.9 None
ERR176779 HR-TB lineage4.9 None
ERR405209 Sensitive La1.7;lineage4.9 None
ERR4829530 Pre-XDR-TB lineage4.8 None
ERR323107 HR-TB lineage4.9 None
ERR1063859 HR-TB La1.7.1;lineage4.9 None
SRR13423544 Other lineage4.5 None
ERR11465509 Sensitive lineage4.3.4.2.1 None
ERR3283014 Other La3;lineage4.9 None
ERR978766 RR-TB lineage4.8 None
SRR10809074 HR-TB lineage4.9 None
SRR3618864 Pre-XDR-TB lineage2.2.1 None
SRR6044875 Other lineage4.9 None
ERR369160 Sensitive lineage4.9 None
ERR363445 Other lineage4.9 None
ERR4819546 HR-TB lineage3 None
ERR133825 HR-TB La1;lineage4.9 None
ERR5311099 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR926164 Other lineage4.9 None
SRR6046299 Other lineage4.3.1;lineage4.9;lineage6 None
SRR19295647 HR-TB lineage4.9 None
ERR3797047 MDR-TB lineage4.9 None
SRR14782405 HR-TB lineage4.9 None
SRR3675246 Other lineage4.9 None
ERR4178226 Sensitive lineage4 None
ERR363453 Other lineage4.9 None
SRR1172796 Sensitive lineage2.2.1.2 None
SRR5341455 Sensitive lineage4.9 None
SRR12708392 Other lineage2.2.1 None
SRR3675494 RR-TB lineage4.9 None
ERR4797201 Other lineage1.2.2.2 None
ERR369156 Sensitive lineage4.9 None
ERR5311102 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR373947 Other lineage4.9 None
SRR5341467 Other lineage4.9 None
SRR6044835 Other lineage4.9 None
ERR4188350 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR11465511 Other lineage4.3.4.2.1 None
SRR16278274 Other La1.4 None
SRR6045892 Sensitive lineage4.9 None
ERR5311083 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR3675320 MDR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9 None
ERR5311090 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR6865513 Other lineage4.1.2.1 None
ERR3077978 RR-TB lineage1.1 None
ERR736834 HR-TB lineage4.9 None
SRR5341412 Pre-XDR-TB lineage3 None
ERR363479 Other lineage4.9 None
SRR1915487 Other La1.2.BCG None
SRR6045503 Other lineage4.9 None
ERR473334 HR-TB lineage4.9 None
SRR5341469 HR-TB lineage4.9 None
SRR5341456 Other lineage4.9 None
ERR363446 Other lineage4.9 None
ERR3283025 MDR-TB La1.7;lineage4.9 None
SRR6045359 HR-TB lineage4.9 None
ERR363456 Sensitive lineage4.9 None
ERR8479578 HR-TB lineage1.1.3.1 None