Rv0668 - c.-222G>C
Drug resistance types
39 Sensitive
20 RR-TB
131 HR-TB
38 MDR-TB
17 Pre-XDR-TB
0 XDR-TB
150 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage1.2.1.2 | 2 |
| lineage4.1.2.1 | 27 |
| lineage2 | 5 |
| 131 | |
| lineage4.9 | 76 |
| lineage4 | 15 |
| lineage4.8 | 8 |
| lineage4;lineage2.2 | 1 |
| lineage4.1.1 | 3 |
| lineage4.1 | 2 |
| lineage4.1.1.3 | 4 |
| lineage2.2.1 | 24 |
| lineage2.2 | 9 |
| lineage2.1 | 2 |
| lineage3;lineage2.1 | 1 |
| lineage4.3.4.2.1 | 2 |
| lineage4.3 | 2 |
| lineage3 | 11 |
| lineage4.4.1.1 | 5 |
| lineage2.2.2 | 1 |
| lineage4;lineage1.1.2 | 1 |
| lineage4.2.1.1 | 1 |
| lineage4.8;La3 | 1 |
| La1.8.1 | 4 |
| lineage4.1.2 | 1 |
| lineage4.2.2.2 | 1 |
| lineage3.1.1 | 1 |
| lineage4;lineage1.1 | 1 |
| lineage4.7 | 3 |
| lineage4.9;lineage4.2.1 | 1 |
| lineage1.1 | 1 |
| lineage4.6.4 | 2 |
| lineage5.2 | 2 |
| lineage3.1 | 4 |
| lineage4.6.2.2 | 3 |
| lineage4.3.3 | 7 |
| lineage4.2.1 | 1 |
| lineage5.1.1 | 1 |
| lineage4.3.4 | 1 |
| lineage4.1.3 | 2 |
| lineage1.2.2.2 | 2 |
| La1.2 | 2 |
| lineage4.3.4.1 | 2 |
| lineage4.5 | 3 |
| lineage4.3.2 | 2 |
| lineage4.1.2.1.1 | 1 |
| lineage3.1.3 | 1 |
| lineage1.1.2 | 1 |
| lineage4.8;lineage4.1 | 2 |
| lineage6.2.3 | 1 |
| lineage6 | 1 |
| lineage6.3.1 | 1 |
| La3 | 1 |
| lineage4.9;lineage2.2 | 1 |
| lineage4.4.1.1.1 | 1 |
| lineage1.2.1.2.1 | 1 |
| La1.4 | 1 |
| lineage7;lineage2.2.1.2 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 395 |
Geographic prevalence
Country level data for this variant is available for 4 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR20969475 | Other | lineage1.2.1.2 | None | SRR21240055 | Other | lineage4.1.2.1 | None | SRR20969677 | HR-TB | lineage2 | None | SRR8692887 | Other | None | SRR21677886 | Sensitive | lineage4.9 | None | SRR22424765 | MDR-TB | lineage4 | None | ERR11081258 | Other | lineage4.8 | None | SRR8692790 | RR-TB | lineage4 | None | SRR8692822 | Other | lineage4.9 | None | SRR8692800 | Other | lineage4 | None | SRR8692863 | Other | lineage4;lineage2.2 | None | ERR1035239 | HR-TB | None | SRR8692888 | Other | lineage4.9 | None | ERR4815604 | HR-TB | None | ERR176793 | Other | lineage4.1.1 | None | SRR6325445 | HR-TB | None | SRR3675465 | HR-TB | None | SRR3675464 | HR-TB | lineage4.1 | None | ERR550636 | MDR-TB | lineage4.1.1.3 | None | ERR161033 | HR-TB | None | ERR4815310 | Other | None | ERR4814352 | HR-TB | lineage2.2.1 | None | SRR3675482 | HR-TB | None | SRR3675486 | HR-TB | None | SRR3618864 | Pre-XDR-TB | lineage2.2.1 | None | SRR3619841 | Pre-XDR-TB | lineage2.2.1 | None | SRR3619764 | Pre-XDR-TB | lineage2.2 | None | SRR3416776 | Other | lineage2.1 | None | ERR4814536 | MDR-TB | lineage3;lineage2.1 | None | SRR3601585 | Pre-XDR-TB | lineage2.2 | None | SRR3675221 | HR-TB | None | ERR4815550 | Other | lineage4 | None | SRR3675236 | HR-TB | None | ERR176643 | HR-TB | None | SRR3675232 | Other | lineage4.1.2.1 | None | ERR176549 | Other | lineage4.3.4.2.1 | None | ERR176568 | Other | lineage4.3 | None | ERR2027263 | Other | lineage4 | None | SRR3675311 | Other | None | SRR3675312 | HR-TB | lineage4 | None | SRR3675383 | HR-TB | None | ERR2229542 | Other | lineage4.8 | None | ERR4816999 | Other | None | SAMEA3501073 | RR-TB | lineage4.8 | None | ERR4815752 | Other | lineage4.9 | None | ERR176751 | HR-TB | None | SRR3675510 | Other | None | ERR4816192 | Sensitive | lineage3 | None | SRR3675545 | HR-TB | None | ERR4817037 | Other | lineage4.9 | None | SRR3675558 | HR-TB | None | ERR4817060 | RR-TB | None | ERR212033 | HR-TB | None | ERR4816559 | MDR-TB | lineage4.4.1.1 | None | ERR2446509 | Other | lineage3 | nl | ERR4816551 | HR-TB | lineage4.1.1.3 | None | SRR3675572 | Other | None | SRR3675574 | HR-TB | None | SRR3742665 | HR-TB | None | ERR4816656 | HR-TB | None | ERR4816585 | Other | lineage2.2 | None | ERR553132 | MDR-TB | lineage4.1.2.1 | None | ERR4817204 | RR-TB | lineage4.9 | None | SRR4033549 | HR-TB | lineage2.2.2 | None | ERR4817692 | HR-TB | lineage4;lineage1.1.2 | None | ERR4817735 | Other | lineage4.8 | None | ERR4817896 | HR-TB | lineage2.2.1 | None | ERR4815811 | HR-TB | lineage4.2.1.1 | None | ERR4817893 | Other | lineage4.8;La3 | None | ERR4818021 | Other | La1.8.1 | None | SRR7496472 | Other | None | ERR3275215 | Other | lineage4.1.2.1 | nl | ERR2513229 | MDR-TB | lineage2.2.1 | None | ERR4818347 | Other | lineage4.1.2 | None | ERR4818393 | RR-TB | lineage3 | None | ERR2513470 | Other | lineage4.2.2.2 | None | ERR2509673 | Other | lineage2.2.1 | None | ERR2509886 | RR-TB | lineage3 | None | ERR4818615 | Other | None | SRR5007188 | Other | lineage4 | None | ERR4818646 | Sensitive | lineage4.1.2.1 | None | ERR2446566 | Other | lineage4.1 | None | ERR234659 | HR-TB | None | ERR2229143 | Other | lineage4.1.1 | None | ERR4818929 | HR-TB | None | SRR5007168 | RR-TB | lineage4.9 | None | ERR4819280 | Sensitive | lineage4 | None | ERR2514692 | Other | None | SRR5341456 | Other | None | ERR4820410 | Pre-XDR-TB | lineage3.1.1 | None | SAMN02414850 | Other | lineage4.1.2.1 | None | ERR4819305 | RR-TB | lineage4.9 | None | ERR4819307 | RR-TB | lineage4 | None | ERR4819322 | Other | lineage4;lineage1.1 | None | ERR4819781 | Other | lineage2.2.1 | None | ERR2514821 | Other | lineage2.2.1 | None | SRR5341302 | HR-TB | None | SRR5341333 | HR-TB | None | ERR4819932 | Other | lineage4.7 | None | ERR6359082 | Other | lineage4.9 | None | ERR2693238 | HR-TB | lineage4.9 | None | SRR5341330 | HR-TB | None | ERR4820854 | Other | lineage4.1.2.1 | None | ERR4821811 | RR-TB | lineage4.9 | None | ERR4821053 | Other | lineage3 | None | SRR5431730 | Other | La1.8.1 | None | ERR2693239 | HR-TB | None | ERR278594 | HR-TB | None | SRR6045526 | HR-TB | None | ERR4822138 | Other | lineage4.1.2.1 | None | ERR4821276 | Other | lineage3 | None | ERR4821747 | MDR-TB | lineage4.9;lineage4.2.1 | None | SRR5709967 | MDR-TB | lineage2.2.1 | None | SRR5818647 | RR-TB | lineage4.3.4.2.1 | None | SRR6045952 | HR-TB | None | SRR6044790 | HR-TB | None | SRR6044855 | Other | lineage4.9 | None | SRR6046225 | HR-TB | None | SRR6325442 | HR-TB | None | SRR6045124 | Other | lineage4.9 | None | SRR6046066 | HR-TB | None | SRR6045327 | HR-TB | None | SRR6046253 | HR-TB | lineage4.9 | None | SRR6046305 | Other | lineage4.9 | None | SRR6046492 | Other | None | SRR6046299 | HR-TB | None | SRR6325444 | HR-TB | None | ERR2446118 | Other | lineage4.1.2.1 | nl | ERR3077978 | Other | lineage1.1 | None | SRR6325448 | HR-TB | None | SRR6046521 | Other | lineage4.4.1.1 | None | SRR6046540 | HR-TB | None | SRR6325447 | HR-TB | None | SRR6046737 | Other | lineage4.9 | None | SRR6458423 | HR-TB | lineage2.2.1 | None | SRR6397654 | HR-TB | lineage4.1.2.1 | None | SRR6046514 | HR-TB | None | SRR6458421 | MDR-TB | lineage2.2.1 | None | ERR4872102 | MDR-TB | lineage4.6.4 | None | ERR502470 | RR-TB | lineage4.9 | None | ERR4831117 | HR-TB | None | ERR4872094 | MDR-TB | lineage5.2 | None | ERR323034 | HR-TB | lineage3.1 | None | ERR294248 | HR-TB | None | ERR4872119 | MDR-TB | lineage4.6.2.2 | None | ERR4831545 | Pre-XDR-TB | lineage2.2 | None | ERR4831546 | HR-TB | lineage2.2 | None | SRR6831950 | Other | lineage4.3.3 | None | SRR6785263 | Sensitive | lineage2.2.1 | None | SRR6785413 | Other | lineage2.2.1 | None | SRR6785267 | Other | lineage2.2.1 | None | SRR6785268 | Sensitive | lineage4.2.1 | None | ERR294266 | HR-TB | None | SRR6789626 | Other | None | ERR323036 | HR-TB | None | ERR502532 | HR-TB | None | ERR502517 | MDR-TB | lineage5.1.1 | None | ERR3275190 | Other | lineage3 | nl | ERR5311090 | HR-TB | None | ERR5311081 | HR-TB | None | ERR5311099 | HR-TB | None | ERR323038 | HR-TB | None | SRR7131023 | Other | lineage4.1.2.1 | None | SRR7496523 | Other | lineage4.7 | None | SRR7496509 | Other | None | SRR7496517 | Other | None | ERR323043 | HR-TB | None | ERR323041 | HR-TB | None | SRR7585435 | Other | lineage4.9 | None | ERR1034647 | MDR-TB | lineage4.1.1.3 | None | ERR323054 | HR-TB | lineage3.1 | None | ERR1023295 | HR-TB | lineage4.1.2.1 | None | ERR323055 | HR-TB | None | ERR323063 | HR-TB | None | ERR1035157 | Other | lineage4.9 | None | ERR108125 | Pre-XDR-TB | lineage4.9 | None | ERR10796631 | Other | lineage4.3.4 | None | ERR3283027 | HR-TB | None | ERR11049020 | Other | lineage4.8 | None | ERR3283017 | HR-TB | None | ERR3283006 | RR-TB | lineage4.9 | None | ERR3283036 | HR-TB | None | ERR3283048 | HR-TB | lineage4.9 | None | ERR3797058 | Other | lineage4.9 | None | ERR3445504 | HR-TB | None | ERR3468544 | HR-TB | None | ERR3797016 | HR-TB | None | ERR3283055 | HR-TB | None | ERR3797023 | HR-TB | La1.8.1 | None | ERR3797046 | HR-TB | None | ERR3804169 | HR-TB | lineage4.1.3 | None | ERR3797069 | Other | None | ERR3797083 | HR-TB | None | ERR3804155 | Other | lineage4.1.2.1 | None | ERR4188350 | HR-TB | None | ERR4407463 | HR-TB | None | ERR4796584 | Sensitive | lineage1.2.2.2 | None | ERR4769418 | Other | La1.2 | None | ERR4769433 | Pre-XDR-TB | lineage4.9 | None | ERR4796351 | MDR-TB | lineage4.9 | None | ERR4769497 | HR-TB | La1.2 | None | ERR4800341 | Other | lineage3 | None | ERR4797201 | Other | lineage1.2.2.2 | None | ERR4797054 | Pre-XDR-TB | lineage2 | None | ERR4798493 | MDR-TB | lineage2.2.1 | None | ERR4799025 | Pre-XDR-TB | None | ERR4811022 | HR-TB | None | ERR4810741 | HR-TB | None | ERR5908228 | Other | lineage4.3.3 | None | ERR4811493 | HR-TB | None | ERR5336148 | Other | None | ERR4811105 | HR-TB | None | ERR4811142 | MDR-TB | None | ERR6866125 | Sensitive | lineage4.1.2.1 | None | ERR6326069 | Pre-XDR-TB | lineage4.3.4.1 | None | ERR6358837 | HR-TB | None | ERR736835 | HR-TB | None | ERR702404 | HR-TB | None | ERR702406 | HR-TB | None | ERR736867 | HR-TB | None | ERR736839 | Other | None | ERR736874 | HR-TB | None | ERR752229 | Other | lineage4.5 | None | ERR772255 | MDR-TB | lineage4.3.2 | None | ERR760733 | MDR-TB | lineage4.1.2.1.1 | None | ERR7911670 | Pre-XDR-TB | lineage2.2 | None | ERR7821163 | Other | lineage2.2.1 | None | ERR9117826 | Other | lineage3.1.3 | None | ERR8976043 | HR-TB | None | ERR9117709 | HR-TB | None | ERR9117721 | HR-TB | lineage1.1.2 | None | ERR9029360 | MDR-TB | lineage2.2.1 | None | ERR9117805 | Other | lineage4.3.2 | None | ERR9119096 | Other | lineage4.3.3 | None | ERR9119500 | MDR-TB | lineage5.2 | None | ERR9119508 | MDR-TB | lineage4.6.4 | None | ERR9786164 | RR-TB | lineage4.1.1.3 | None | ERR9119525 | MDR-TB | lineage4.6.2.2 | None | ERR9786421 | Other | lineage4.1.2.1 | None | ERR9786645 | Other | lineage4.6.2.2 | None | ERR9786443 | Sensitive | lineage4.8 | None | ERR9786526 | Other | lineage4.8;lineage4.1 | None | ERR9786569 | Other | lineage4.8 | None | ERR9786617 | Other | lineage4.1.1 | None | ERR9786611 | HR-TB | lineage4.1.3 | None | ERR9786642 | Other | lineage4.1.2.1 | None | ERR9786525 | Other | lineage4.8;lineage4.1 | None | ERR9786604 | Other | None | ERR9786601 | Other | lineage4.1.2.1 | None | ERR9786627 | Other | lineage4.1.2.1 | None | ERR9786656 | Sensitive | lineage4.1.2.1 | None | ERR9786671 | Other | None | ERR9786843 | Other | None | ERR9786694 | Other | lineage4.1.2.1 | None | ERR9786682 | Other | lineage4.1.2.1 | None | ERR9787061 | Sensitive | lineage6.2.3 | None | ERR9787165 | Other | lineage6 | None | ERR987707 | MDR-TB | lineage4.7 | None | ERR9787139 | Other | lineage6.3.1 | None | ERR9787197 | Other | None | SRR11349211 | Pre-XDR-TB | lineage4.3.3 | None | ERR990545 | Other | lineage3 | None | SRR10315751 | MDR-TB | lineage4.8 | None | SRR069989 | HR-TB | lineage2 | None | SRR10869071 | MDR-TB | lineage2.2.1 | None | SRR1162864 | HR-TB | lineage4.1.2.1 | None | SRR1163221 | HR-TB | lineage4.1.2.1 | None | SRR1165423 | Other | lineage4.1.2.1 | None | SRR1165584 | Other | lineage4.1.2.1 | None | SRR1165506 | Other | lineage4.1.2.1 | None | SRR1167055 | Other | lineage4.1.2.1 | None | SRR1167384 | Other | lineage4 | None | SRR1169306 | Other | None | SRR1169194 | Other | None | SRR1169249 | Other | La3 | None | SRR1172885 | HR-TB | lineage4.9 | None | SRR1172234 | Other | None | SRR1172717 | Other | lineage4.9 | None | SRR1172728 | MDR-TB | None | SRR1172817 | HR-TB | None | SRR1172807 | Sensitive | lineage4.9 | None | SRR1172844 | MDR-TB | lineage4.4.1.1 | None | SRR1172857 | MDR-TB | None | SRR1172951 | Other | None | SRR1173118 | Other | None | SRR1173484 | Other | lineage4 | None | SRR1173166 | Other | lineage4.9 | None | SRR1173218 | Pre-XDR-TB | lineage4.3.3 | None | SRR1173281 | RR-TB | lineage3 | None | SRR1173363 | HR-TB | None | SRR1173400 | Other | None | SRR1173153 | HR-TB | None | SRR1173384 | Other | lineage4 | None | SRR1173453 | Other | lineage4.4.1.1 | None | SRR1173515 | HR-TB | lineage4.9 | None | SRR1175074 | MDR-TB | None | SRR1173788 | Other | None | SRR1175052 | HR-TB | lineage4.9 | None | SRR1173562 | HR-TB | lineage4 | None | SRR1173633 | HR-TB | lineage4.9 | None | SRR1173629 | Other | None | SRR1173706 | Other | lineage4.9 | None | SRR1173719 | HR-TB | lineage3 | None | SRR1173740 | Other | None | SRR1173767 | HR-TB | lineage4.4.1.1 | None | SRR1173778 | Other | None | SRR1175049 | RR-TB | None | SRR1175057 | MDR-TB | lineage4.3 | None | SRR1175513 | Other | lineage4.9 | None | SRR1175090 | Other | lineage4.9 | None | SRR1175491 | MDR-TB | lineage4 | None | SRR1175506 | Sensitive | lineage4.9 | None | SRR1175512 | Sensitive | lineage4.9 | None | SRR1175473 | Other | lineage4.9 | None | SRR1175474 | HR-TB | lineage4.9 | None | SRR1175472 | MDR-TB | lineage4 | None | SRR1175487 | Sensitive | lineage4.9 | None | SRR1180137 | Other | lineage2.2.1 | None | SRR1180250 | Other | lineage4.9 | None | SRR1180148 | Sensitive | lineage4.9 | None | SRR1180319 | Sensitive | lineage4.9 | None | SRR1180300 | Sensitive | lineage4.9 | None | SRR1180312 | Sensitive | lineage4.9 | None | SRR1180406 | Sensitive | lineage4.9 | None | SRR1180345 | Other | lineage4.9 | None | SRR1180355 | Sensitive | lineage4.9 | None | SRR1180399 | Sensitive | lineage4.9 | None | SRR1180375 | Sensitive | lineage4.9 | None | SRR1180391 | Sensitive | lineage4.9 | None | SRR1180413 | Sensitive | lineage4.9 | None | SRR1180410 | Sensitive | lineage4.9;lineage2.2 | None | SRR1180440 | Other | lineage4.9 | None | SRR1180420 | Sensitive | lineage4.9 | None | SRR1180446 | Other | lineage4.9 | None | SRR1180444 | Sensitive | lineage4.9 | None | SRR1181020 | Other | lineage2.2.1 | None | SRR1180977 | Sensitive | lineage4.9 | None | SRR1181214 | Other | lineage4.9 | None | SRR1181349 | Sensitive | lineage4.4.1.1.1 | None | SRR1181237 | Sensitive | lineage2.2 | None | SRR1181289 | Other | lineage2.2.1 | None | SRR1181325 | Sensitive | lineage4.9 | None | SRR1181283 | Sensitive | lineage4.9 | None | SRR1181390 | Sensitive | lineage2 | None | SRR1181368 | Other | lineage4.9 | None | SRR1181351 | Sensitive | lineage4.9 | None | SRR1183049 | Other | lineage2.2 | None | SRR1181402 | Sensitive | lineage4.9 | None | SRR1184021 | Sensitive | lineage4.9 | None | SRR1183054 | Sensitive | lineage4.9 | None | SRR1184308 | Sensitive | lineage4.9 | None | SRR1184294 | HR-TB | None | SRR1184298 | Pre-XDR-TB | lineage4.3.3 | None | SRR1184346 | HR-TB | lineage3.1 | None | SRR1184312 | HR-TB | lineage2.2.1 | None | SRR1184388 | Other | None | SRR1184372 | MDR-TB | None | SRR1184381 | MDR-TB | None | SRR1184380 | HR-TB | None | SRR1196474 | HR-TB | lineage3.1 | None | SRR1196546 | HR-TB | None | SRR1196494 | MDR-TB | None | SRR12142339 | HR-TB | lineage2.2.1 | None | SRR1196566 | HR-TB | None | SRR1196677 | HR-TB | lineage2 | None | SRR1196768 | MDR-TB | None | SRR12006550 | Other | lineage1.2.1.2 | None | SRR1196571 | Pre-XDR-TB | lineage4.3.3 | None | SRR11972425 | Pre-XDR-TB | lineage2.2.1 | None | SRR12142341 | HR-TB | None | SRR12416824 | HR-TB | None | SRR12416840 | MDR-TB | lineage4.9 | None | SRR13861322 | Other | lineage4.9 | None | SRR13423544 | Other | lineage4.5 | None | SRR13583478 | HR-TB | lineage4.3.4.1 | None | SRR13837813 | Other | lineage4.9 | None | SRR13861549 | RR-TB | lineage4.9 | None | SRR13861528 | HR-TB | lineage4.9 | None | SRR13861447 | RR-TB | lineage4.9 | None | SRR13861484 | RR-TB | lineage4.9 | None | SRR16156804 | RR-TB | lineage4.9 | None | SRR14782405 | HR-TB | None | SRR1510066 | Other | lineage1.2.1.2.1 | None | SRR15368973 | Other | None | SRR16156775 | Other | lineage4.9 | None | SRR16278274 | Other | La1.4 | None | SRR16157123 | Other | lineage4.9 | None | SRR1791696 | Other | La1.8.1 | None | SRR1710057 | Other | lineage2.1 | None | SRR1640750 | HR-TB | None | SRR18213713 | HR-TB | lineage4.5 | None | SRR18549032 | HR-TB | lineage7;lineage2.2.1.2 | None | SRR18910194 | HR-TB | lineage2.2 | None | SRR19303884 | HR-TB | None | SRR19304036 | HR-TB | None |
|---|
