Rv3596c - c.750G>C
Drug resistance types
30 Sensitive
16 RR-TB
53 HR-TB
18 MDR-TB
12 Pre-XDR-TB
1 XDR-TB
56 Other
lineage Counts
| lineage | Count |
|---|---|
| 34 | |
| lineage2.2.1 | 21 |
| lineage4.7 | 1 |
| lineage4.1.2.1 | 2 |
| lineage4.4.1.2 | 1 |
| lineage2.2.2 | 2 |
| lineage4 | 28 |
| lineage4.3.4.1 | 1 |
| lineage2.2 | 1 |
| lineage4.3.4.2.1 | 3 |
| lineage4.9 | 49 |
| La1.8.1 | 2 |
| lineage4;lineage3.1 | 1 |
| La1.3 | 3 |
| lineage4.3.4 | 1 |
| lineage1.1.3.1 | 1 |
| lineage6.1.3 | 1 |
| lineage3 | 6 |
| lineage4.8 | 3 |
| lineage4.3.3 | 2 |
| lineage4.8;lineage4.3.3 | 4 |
| lineage4.4.1.1;lineage4.1.2.1 | 1 |
| lineage4.4.1.1.1 | 1 |
| La3 | 1 |
| lineage2.2.1.1 | 4 |
| lineage4.4.2 | 2 |
| lineage1.1.1 | 1 |
| lineage4.9;lineage4.8.1;lineage4.1.1 | 1 |
| La1.7.1 | 1 |
| lineage1.2.1.1 | 1 |
| lineage2.1 | 1 |
| lineage4.3 | 1 |
| lineage1.1.2 | 1 |
| lineage4.9;lineage2.1 | 1 |
| lineage4.2.1 | 1 |
| lineage4.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 186 |
Geographic prevalence
Country level data for this variant is available for 1 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR294266 | HR-TB | None | SRR9971270 | RR-TB | lineage2.2.1 | None | SRR7496471 | Sensitive | None | SRR7496523 | Other | lineage4.7 | None | SRR9971080 | RR-TB | lineage2.2.1 | None | SRR9613550 | HR-TB | lineage4.1.2.1 | None | ERR1034634 | HR-TB | None | ERR323056 | HR-TB | lineage4.4.1.2 | None | ERR1023502 | MDR-TB | lineage2.2.1 | None | ERR323045 | HR-TB | None | DRR184629 | Other | lineage2.2.1 | None | DRR185024 | Other | lineage2.2.2 | None | ERR1023525 | HR-TB | lineage4 | None | ERR11465352 | Sensitive | lineage4.3.4.1 | None | ERR1063839 | HR-TB | lineage2.2 | None | ERR1063857 | HR-TB | None | ERR1063855 | Other | lineage4 | None | ERR1063859 | HR-TB | None | ERR1063862 | HR-TB | None | ERR1063858 | HR-TB | None | ERR3283040 | HR-TB | None | ERR11465628 | Sensitive | lineage4.3.4.2.1 | None | ERR3283030 | HR-TB | lineage4.9 | None | ERR3273109 | MDR-TB | lineage4 | None | ERR3797080 | HR-TB | lineage4.9 | None | ERR3439265 | Other | lineage4.9 | None | ERR3439441 | Other | La1.8.1 | None | ERR3439489 | RR-TB | La1.8.1 | None | ERR3445503 | HR-TB | None | ERR3283046 | MDR-TB | lineage4.9 | None | ERR3797015 | HR-TB | None | ERR3797065 | MDR-TB | lineage4 | None | ERR4596910 | Sensitive | lineage4 | None | ERR3797081 | Sensitive | lineage4 | None | ERR4188247 | HR-TB | None | ERR405209 | Sensitive | lineage4 | None | ERR405219 | HR-TB | lineage4;lineage3.1 | None | ERR473323 | HR-TB | lineage4.9 | None | ERR473303 | Sensitive | lineage4.9 | None | ERR4769442 | HR-TB | lineage4 | None | ERR473334 | HR-TB | lineage4.9 | None | ERR473367 | Sensitive | lineage4.9 | None | ERR4769436 | Other | La1.3 | None | ERR4769514 | Other | La1.3 | None | ERR4769444 | HR-TB | lineage4.9 | None | ERR4769474 | HR-TB | lineage4 | None | ERR4769521 | HR-TB | None | ERR4769553 | RR-TB | lineage4.9 | None | ERR4769555 | Other | La1.3 | None | ERR4796472 | Pre-XDR-TB | lineage2.2.1 | None | ERR4796577 | MDR-TB | None | ERR4797474 | Other | None | ERR6359070 | Other | lineage4.9 | None | ERR4799478 | Pre-XDR-TB | lineage2.2.1 | None | ERR6358951 | HR-TB | lineage4 | None | ERR6359066 | HR-TB | lineage4 | None | ERR4808964 | RR-TB | lineage2.2.1 | None | ERR4809333 | Pre-XDR-TB | lineage2.2.2 | None | ERR5917985 | MDR-TB | lineage2.2.1 | None | ERR5987263 | MDR-TB | lineage2.2.1 | None | ERR6359074 | HR-TB | lineage4.9 | None | ERR6359069 | Other | lineage4.9 | None | ERR736848 | HR-TB | None | ERR6866410 | Sensitive | None | ERR6866807 | HR-TB | lineage4 | None | ERR736817 | HR-TB | lineage4.3.4 | None | ERR736831 | HR-TB | lineage4.9 | None | ERR736837 | Other | lineage4.9 | None | ERR736875 | HR-TB | lineage4 | None | ERR9634265 | Sensitive | None | ERR8479578 | Sensitive | lineage1.1.3.1 | None | ERR9119733 | MDR-TB | lineage2.2.1 | None | ERR9787153 | Other | lineage6.1.3 | None | ERR9786076 | Sensitive | lineage3 | None | SRR10315751 | MDR-TB | lineage4.8 | None | ERR9896144 | Other | lineage3 | None | ERR9992879 | XDR-TB | lineage4.3.3 | None | SRR10315551 | Sensitive | lineage2.2.1 | None | SRR1049677 | MDR-TB | lineage4.8;lineage4.3.3 | None | SRR1049673 | Pre-XDR-TB | lineage3 | None | SRR1049676 | MDR-TB | lineage4.8;lineage4.3.3 | None | SRR1049725 | RR-TB | lineage4.1.2.1 | None | SRR1049726 | MDR-TB | lineage4.4.1.1;lineage4.1.2.1 | None | SRR1062919 | HR-TB | lineage2.2.1 | None | SRR10808399 | Sensitive | lineage4 | None | SRR1062920 | MDR-TB | lineage4.8;lineage4.3.3 | None | SRR1062928 | RR-TB | lineage4 | None | SRR11349145 | Pre-XDR-TB | lineage4.4.1.1.1 | None | SRR1140724 | HR-TB | lineage2.2.1 | None | SRR1140574 | MDR-TB | lineage4.8;lineage4.3.3 | None | SRR1169249 | Other | La3 | None | SRR1140736 | RR-TB | None | SRR1167384 | Other | lineage4 | None | SRR1169306 | Other | None | SRR1175474 | HR-TB | lineage4.9 | None | SRR1175473 | Other | lineage4.9 | None | SRR1175491 | MDR-TB | lineage4 | None | SRR1175472 | MDR-TB | lineage4 | None | SRR1180147 | Other | lineage2.2.1.1 | None | SRR1180172 | Other | lineage2.2.1 | None | SRR1180270 | Other | lineage2.2.1 | None | SRR1183144 | Other | lineage2.2.1 | None | SRR1181091 | Other | lineage2.2.1.1 | None | SRR1183106 | Other | lineage2.2.1.1 | None | SRR1184024 | Other | lineage2.2.1.1 | None | SRR15316595 | RR-TB | lineage4.4.2 | None | SRR11972425 | Pre-XDR-TB | lineage2.2.1 | None | SRR14066533 | Sensitive | lineage1.1.1 | None | SRR20969542 | Other | lineage4.4.2 | None | SRR20632814 | Sensitive | lineage4 | None | ERR779852 | Sensitive | lineage4.9;lineage4.8.1;lineage4.1.1 | None | SRR21677886 | Sensitive | lineage4.9 | None | SRR21469201 | Other | La1.7.1 | None | ERR176778 | HR-TB | None | ERR176779 | HR-TB | None | ERR4815471 | Other | lineage4.9 | None | ERR4815310 | Other | None | SRR3619841 | Pre-XDR-TB | lineage2.2.1 | None | SRR3618864 | Pre-XDR-TB | lineage2.2.1 | None | ERR4814734 | Other | lineage1.2.1.1 | None | ERR702405 | Sensitive | lineage2.1 | None | ERR176518 | Sensitive | lineage4.3.4.2.1 | None | ERR176568 | Other | lineage4.3 | None | ERR4813263 | MDR-TB | lineage4.8 | None | ERR176643 | HR-TB | None | ERR176651 | HR-TB | None | ERR4815550 | Other | lineage4 | None | ERR4816322 | Other | lineage4.9 | None | ERR181887 | HR-TB | None | ERR4816964 | Other | lineage4.9 | None | ERR212033 | HR-TB | None | ERR212125 | HR-TB | lineage4 | None | ERR4816470 | Other | lineage3 | None | SRR3675571 | HR-TB | None | ERR216965 | HR-TB | lineage4.9 | None | ERR4816852 | Other | lineage4.9 | None | ERR4818710 | Sensitive | lineage4.9 | None | ERR4817915 | RR-TB | lineage4.9 | None | ERR3275709 | HR-TB | lineage3 | nl | ERR2432997 | Other | lineage4.8 | None | ERR245675 | Sensitive | lineage1.1.2 | None | ERR4818110 | Sensitive | lineage4.9 | None | ERR2513259 | Other | lineage3 | None | ERR4818536 | Other | lineage4.9 | None | ERR4819051 | Other | lineage4 | None | SRR5153091 | HR-TB | lineage4.3.3 | None | ERR4818624 | Other | lineage4.3.4.2.1 | None | ERR4819357 | Other | lineage4.9 | None | ERR4819383 | RR-TB | lineage4.9 | None | ERR4819462 | Other | lineage4 | None | ERR4819863 | RR-TB | lineage4.9 | None | ERR4819933 | Other | lineage4.9 | None | ERR1023509 | Other | None | ERR502511 | Sensitive | lineage4.9;lineage2.1 | None | ERR4821057 | HR-TB | lineage4 | None | ERR4821143 | RR-TB | lineage4.9 | None | SRR6045519 | HR-TB | None | ERR4821172 | RR-TB | lineage4.9 | None | SRR6045795 | HR-TB | lineage2.2.1 | None | SRR6045664 | Other | lineage4.2.1 | None | ERR2693227 | Other | lineage4.9 | None | SRR6046141 | Other | lineage4.9 | None | SRR6046151 | Sensitive | lineage4.9 | None | SRR6044780 | Other | lineage4.9 | None | SRR6045832 | HR-TB | lineage4.9 | None | SRR6045892 | Sensitive | None | SRR6044838 | Other | lineage4.9 | None | SRR6046385 | Other | lineage4.9 | None | SRR6044835 | Sensitive | lineage4 | None | SRR6045010 | Other | lineage4 | None | SRR6045191 | Sensitive | lineage4.9 | None | SRR6045233 | HR-TB | None | SRR6045399 | Other | None | SRR6046397 | Other | None | SRR6046839 | Other | lineage4.9 | None | ERR2851356 | Sensitive | lineage4.9 | None | ERR323037 | HR-TB | lineage4 | None | ERR502473 | Pre-XDR-TB | lineage4.9 | None | ERR485006 | HR-TB | lineage4.9 | None | ERR502479 | RR-TB | lineage4.9 | None | ERR502474 | Pre-XDR-TB | lineage4.9 | None | ERR502478 | RR-TB | lineage4.9 | None | ERR502481 | Pre-XDR-TB | lineage4.9 | None | ERR4872322 | Pre-XDR-TB | lineage2.2.1 | None | ERR502510 | Sensitive | lineage4 | None | SRR6789624 | MDR-TB | lineage4.1 | None |
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