Rv0668 - c.-474G>C


Drug resistance types
19 Sensitive 32 RR-TB 65 HR-TB 35 MDR-TB 48 Pre-XDR-TB 0 XDR-TB 31 Other
lineage Counts
lineage Count
lineage2.2 25
lineage2.2.1 35
lineage2.2.2 20
lineage3.1.1 2
lineage4.1.1.3 4
lineage4.4.2 4
lineage3 18
22
lineage2.2.1.1 2
lineage4 14
lineage4.9 40
lineage4;lineage2.2.2 1
lineage2.2.2;lineage2.2.1 2
lineage4.5 3
lineage4.9;lineage2 1
lineage4.3.4.2.1 5
lineage4.1.2.1 4
lineage4.4.1.1;lineage4.1.2.1 1
La1.6 1
lineage4.8 3
lineage4.4.1.2 1
lineage4.4.1.1 3
La1.8.1 2
lineage4.3.3 5
lineage4.6.2.2 2
lineage4.3.4.2 1
lineage4.8.2 1
lineage4.1.1.3.1 2
lineage4.3.4.1 2
lineage1.1.3.1 1
lineage4.9;lineage4.2.1 1
lineage5.1.1 1
lineage4.3.4 1
spoligotype Counts
spoligotype Count
None 230
Geographic prevalence
Country level data for this variant is available for 4 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR1013568 Pre-XDR-TB lineage2.2 None
ERR9119733 MDR-TB lineage2.2.1 None
SRR1013553 Pre-XDR-TB lineage2.2 None
SRR1013567 Pre-XDR-TB lineage2.2.2 None
SRR1013569 Pre-XDR-TB lineage2.2.1 None
ERR9117740 Other lineage3.1.1 None
ERR9786164 RR-TB lineage4.1.1.3 None
SRR1013554 Pre-XDR-TB lineage2.2 None
SRR1013566 Pre-XDR-TB lineage4.4.2 None
SRR1013578 MDR-TB lineage2.2 None
SRR1013570 Pre-XDR-TB lineage2.2.1 None
SRR1013583 HR-TB lineage2.2 None
SRR1013581 Pre-XDR-TB lineage2.2 None
SRR1013577 MDR-TB lineage2.2 None
SRR1013590 HR-TB lineage2.2.1 None
SRR1013584 HR-TB lineage2.2 None
SRR1013582 Pre-XDR-TB lineage2.2.1 None
SRR1013589 HR-TB lineage2.2.1 None
SRR1013597 HR-TB lineage2.2 None
SRR1013595 HR-TB lineage3 None
SRR1013596 HR-TB lineage3 None
SRR1013607 HR-TB lineage2.2 None
SRR1013598 HR-TB None
SRR1013600 HR-TB lineage2.2.1.1 None
SRR1013599 HR-TB None
SRR1013601 HR-TB lineage2.2.1 None
SRR1013602 HR-TB lineage2.2.1 None
SRR1013604 HR-TB lineage2.2.1 None
SRR1013603 HR-TB lineage2.2.1 None
SRR1013609 HR-TB lineage4 None
SRR1013608 HR-TB lineage2.2 None
SRR1013614 HR-TB lineage2.2 None
SRR1013610 HR-TB lineage4 None
SRR1013621 Pre-XDR-TB lineage2.2 None
SRR1013611 HR-TB lineage4 None
SRR1013617 MDR-TB None
SRR1013613 HR-TB lineage2.2.1 None
SRR1013618 MDR-TB None
SRR1013630 Pre-XDR-TB lineage2.2 None
SRR1013622 Pre-XDR-TB lineage2.2 None
SRR1013633 MDR-TB lineage2.2 None
SRR1013629 Pre-XDR-TB lineage2.2 None
SRR1013634 MDR-TB lineage2.2 None
SRR1048867 Pre-XDR-TB lineage2.2.2 None
SRR1047993 HR-TB lineage2.2.1 None
SRR1048852 Pre-XDR-TB lineage4.9 None
SRR1048865 Pre-XDR-TB lineage4.4.2 None
SRR1047996 MDR-TB lineage2.2.2 None
SRR1048853 Pre-XDR-TB lineage4;lineage2.2.2 None
SRR1048866 Pre-XDR-TB lineage4.4.2 None
SRR1048870 Pre-XDR-TB lineage2.2 None
SRR1048868 Pre-XDR-TB lineage2.2.2 None
SRR1048869 Pre-XDR-TB lineage2.2.2 None
SRR1048965 Pre-XDR-TB lineage2.2.1 None
SRR1048885 MDR-TB None
SRR1048886 MDR-TB lineage2.2 None
SRR1048969 MDR-TB lineage2.2.2 None
SRR1048968 HR-TB lineage2.2.2;lineage2.2.1 None
SRR1048966 Pre-XDR-TB lineage2.2.1 None
SRR1048975 HR-TB lineage2.2.1 None
SRR1048974 HR-TB lineage2.2.1 None
SRR1048988 HR-TB lineage2.2 None
SRR1048980 HR-TB lineage3 None
SRR1048985 HR-TB lineage2.2.1 None
SRR1048983 HR-TB None
SRR1048987 HR-TB lineage2.2.1 None
SRR1048986 HR-TB lineage2.2.1 None
SRR1048992 HR-TB lineage2.2.2 None
SRR1048991 HR-TB lineage2.2.2 None
SRR1048997 HR-TB lineage2.2.1 None
SRR1048994 HR-TB lineage4.9 None
SRR1048996 HR-TB lineage4.5 None
SRR1048993 HR-TB lineage4.9 None
SRR1048995 HR-TB lineage4.5 None
SRR1049005 MDR-TB lineage2.2.2 None
SRR1048998 HR-TB lineage2.2.1 None
SRR1049004 MDR-TB lineage2.2.2 None
SRR1049006 MDR-TB lineage2.2.2 None
SRR1049007 Pre-XDR-TB lineage2.2.2 None
SRR1049022 HR-TB lineage4.9;lineage2 None
SRR1049026 Pre-XDR-TB None
SRR1049023 HR-TB lineage2.2 None
SRR1049559 MDR-TB lineage4.3.4.2.1 None
SRR1049040 MDR-TB lineage2.2.1 None
SRR1049560 MDR-TB lineage4.3.4.2.1 None
SRR1049027 Pre-XDR-TB None
SRR1049041 MDR-TB None
SRR1049725 RR-TB lineage4.1.2.1 None
SRR1049673 Pre-XDR-TB lineage3 None
SRR1049672 Other lineage3 None
SRR1049726 MDR-TB lineage4.4.1.1;lineage4.1.2.1 None
SRR1062928 RR-TB lineage4 None
SRR1062871 MDR-TB lineage4.3.4.2.1 None
SRR1062918 Pre-XDR-TB lineage3 None
SRR1144809 HR-TB lineage2.2.1 None
SRR1144744 HR-TB lineage2.2.1 None
SRR10993951 RR-TB La1.6 None
SRR1140716 Pre-XDR-TB lineage3 None
SRR1140736 RR-TB None
SRR1140753 MDR-TB lineage4.3.4.2.1 None
SRR1144759 MDR-TB lineage2.2 None
SRR1173450 RR-TB lineage4.9 None
SRR1172066 Sensitive lineage4.9 None
SRR1173170 Other lineage4.9 None
SRR1173185 HR-TB lineage4.9 None
SRR1173770 Other lineage4.9 None
SRR1173740 Other None
SRR1196478 MDR-TB lineage4.9 None
SRR1184329 MDR-TB lineage4.9 None
SRR19303820 RR-TB lineage4.8 None
SRR17567887 Sensitive lineage4.4.1.2 None
SRR17567930 Other lineage4.4.1.1 None
SRR1792022 Other La1.8.1 None
SRR11972425 Pre-XDR-TB lineage2.2.1 None
SRR3619764 Pre-XDR-TB lineage2.2 None
SRR2100067 Other lineage4.3.3 None
SRR3601585 Pre-XDR-TB lineage2.2 None
ERR4815310 Other None
SRR3619841 Pre-XDR-TB lineage2.2.1 None
SAMN02360583 HR-TB lineage2.2.2 None
SRR3618864 Pre-XDR-TB lineage2.2.1 None
ERR4815572 Other lineage4.1.2.1 None
ERR2446544 Sensitive lineage3 nl
ERR1750921 Sensitive lineage4.1.1.3 None
ERR4815550 Other lineage4 None
ERR4815909 Other lineage4.8 None
SAMN02360556 Pre-XDR-TB lineage2.2.2 None
SAMN02360581 HR-TB lineage2.2.1 None
ERR3275548 Sensitive lineage3 nl
ERR4817060 RR-TB None
ERR212114 Other lineage4.3.4.2.1 None
ERR4817131 Pre-XDR-TB None
SAMN02360586 HR-TB lineage2.2.1 None
ERR3275709 HR-TB lineage3 nl
ERR216965 HR-TB lineage4.9 None
ERR4816702 RR-TB lineage4.6.2.2 None
SAMN02360571 HR-TB lineage2.2.2;lineage2.2.1 None
ERR4816610 RR-TB lineage4.3.3 None
SAMN02360590 MDR-TB lineage2.2.2 None
ERR4817915 RR-TB lineage4.9 None
ERR4816729 Sensitive lineage4.9 None
SAMN02360570 Pre-XDR-TB lineage2.2.1 None
SAMN02360562 Pre-XDR-TB lineage4.4.2 None
ERR4816755 Other lineage4.1.1.3 None
ERR4817526 Other lineage4.4.1.1 gb
ERR4819086 HR-TB lineage4.6.2.2 None
SAMN02360595 Pre-XDR-TB lineage2.2.2 None
SAMN02380982 MDR-TB lineage4.3.4.2 None
SAMN02360580 HR-TB lineage2.2.1 None
SAMN02360574 HR-TB lineage2.2.1 None
SAMN02398710 MDR-TB lineage2.2.2 None
SAMN02360591 Pre-XDR-TB lineage2.2.2 None
ERR4818110 Sensitive lineage4.9 None
ERR4819051 Other lineage4 None
ERR4818851 RR-TB lineage4.4.1.1 None
SAMN02360577 HR-TB lineage3 None
ERR4818904 Other lineage4.8 None
SAMN02360563 Pre-XDR-TB lineage2.2.2 None
SRR5007168 RR-TB lineage4.9 None
SRR5007169 RR-TB lineage4.8.2 None
SRR5007170 RR-TB lineage4.9 None
ERR4817584 MDR-TB lineage3 None
SRR5341365 Pre-XDR-TB lineage3 None
SRR5007161 RR-TB lineage4.1.1.3.1 None
SRR5007167 RR-TB lineage4.1.1.3.1 None
ERR4819265 HR-TB lineage4.3.4.1 None
ERR4821276 Other lineage3 None
ERR4820410 Pre-XDR-TB lineage3.1.1 None
ERR4819863 RR-TB lineage4.9 None
ERR4819910 Other lineage4.9 None
ERR4820030 Other lineage4.9 None
SAMN02360585 HR-TB lineage4.5 None
SAMN02360579 HR-TB lineage2.2.1.1 None
ERR4819383 RR-TB lineage4.9 None
ERR4819430 Sensitive lineage4.1.2.1 None
SAMN02360564 Pre-XDR-TB lineage2.2.1 None
ERR4819864 RR-TB lineage1.1.3.1 None
ERR2517457 Sensitive lineage3 None
ERR4821172 RR-TB lineage4.9 None
ERR4821272 RR-TB lineage4.1.2.1 None
ERR4829238 Sensitive lineage3 None
SRR6046376 Other lineage3 None
ERR4821704 MDR-TB lineage4.3.3 None
ERR4821747 MDR-TB lineage4.9;lineage4.2.1 None
SRR6044780 Other lineage4.9 None
SRR6045010 Other lineage4 None
SRR6045267 RR-TB lineage4 None
SRR6046839 Other lineage4.9 None
SRR6046834 Sensitive lineage4.9 None
SRR6046609 Sensitive lineage4.9 None
ERR502517 MDR-TB lineage5.1.1 None
ERR502479 RR-TB lineage4.9 None
ERR502481 Pre-XDR-TB lineage4.9 None
ERR502470 RR-TB lineage4.9 None
ERR502473 Pre-XDR-TB lineage4.9 None
ERR502474 Pre-XDR-TB lineage4.9 None
ERR502478 RR-TB lineage4.9 None
ERR323108 HR-TB lineage4 None
SRR7131160 Sensitive lineage3 None
ERR1034647 MDR-TB lineage4.1.1.3 None
ERR038289 Other lineage4.3.3 None
ERR1034652 Other None
ERR10796564 Other lineage4.3.3 None
ERR10796577 RR-TB lineage4.9 None
ERR10796565 RR-TB lineage4.9 None
ERR10796572 Other lineage4.3.4.1 None
ERR10796576 RR-TB lineage4.9 None
ERR10796591 MDR-TB lineage4.9 None
ERR3283014 HR-TB None
ERR10796633 RR-TB lineage4.3.4 None
ERR10796594 Other lineage4.9 None
ERR3283057 HR-TB lineage4 None
ERR3283031 HR-TB None
ERR3283049 Sensitive lineage4.9 None
ERR3283047 HR-TB None
ERR3283028 Other None
ERR3439265 Other lineage4.9 None
ERR3439489 RR-TB La1.8.1 None
ERR3797063 HR-TB None
ERR3797048 HR-TB None
ERR3797065 MDR-TB lineage4 None
ERR3797079 Sensitive lineage4 None
ERR3797084 Sensitive lineage4.9 None
ERR3797064 Sensitive None
ERR3797087 Sensitive lineage4 None
ERR736856 HR-TB lineage4 None
ERR4809333 Pre-XDR-TB lineage2.2.2 None
ERR5987263 MDR-TB lineage2.2.1 None
ERR4808964 RR-TB lineage2.2.1 None
ERR751317 Sensitive lineage4.9 None