Rv0668 - c.-474G>C


Drug resistance types
17 Sensitive 32 RR-TB 65 HR-TB 35 MDR-TB 48 Pre-XDR-TB 0 XDR-TB 31 Other
lineage Counts
lineage Count
lineage4.4.1.2 1
lineage2.2.1 35
lineage4.9 40
lineage4.3.3 5
lineage4.4.1.1 2
La1.8.1 2
lineage4.8 3
lineage2.2.2 20
lineage2.2 25
lineage4.1.2.1 5
22
lineage4.1.1.3 4
lineage4 14
lineage4.6.2.2 2
lineage2.2.2;lineage2.2.1 2
lineage4.3.4.2 1
lineage4.4.2 4
lineage4.1.1.3.1 2
lineage3 16
lineage4.8.2 1
lineage4.3.4.1 2
lineage4.5 3
lineage3.1.1 2
lineage1.1.3.1 1
lineage2.2.1.1 2
lineage4.9;lineage4.2.1 1
lineage5.1.1 1
lineage4.3.4 1
lineage4.3.4.2.1 5
lineage4;lineage2.2.2 1
lineage4.9;lineage2 1
lineage4.4.1.1;lineage4.1.2.1 1
La1.6 1
spoligotype Counts
spoligotype Count
None 228
Geographic prevalence
Country level data for this variant is available for 1 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR17567887 Sensitive lineage4.4.1.2 None
SRR11972425 Pre-XDR-TB lineage2.2.1 None
SRR1184329 MDR-TB lineage4.9 None
SRR1196478 MDR-TB lineage4.9 None
SRR2100067 Other lineage4.3.3 None
SRR17567930 Other lineage4.4.1.1 None
SRR1792022 Other La1.8.1 None
SRR19303820 RR-TB lineage4.8 None
SAMN02360556 Pre-XDR-TB lineage2.2.2 None
SRR3601585 Pre-XDR-TB lineage2.2 None
SRR3619764 Pre-XDR-TB lineage2.2 None
SRR3618864 Pre-XDR-TB lineage2.2.1 None
ERR4815572 Other lineage4.1.2.1 None
SAMN02360581 HR-TB lineage2.2.1 None
ERR4815310 Other None
SRR3619841 Pre-XDR-TB lineage2.2.1 None
SAMN02360583 HR-TB lineage2.2.2 None
ERR1750921 Sensitive lineage4.1.1.3 None
ERR4815550 Other lineage4 None
ERR4815909 Other lineage4.8 None
ERR4817060 RR-TB None
ERR4817131 Pre-XDR-TB None
SAMN02360586 HR-TB lineage2.2.1 None
ERR216965 HR-TB lineage4.9 None
SAMN02360595 Pre-XDR-TB lineage2.2.2 None
SAMN02360590 MDR-TB lineage2.2.2 None
ERR4816702 RR-TB lineage4.6.2.2 None
ERR4816729 Sensitive lineage4.9 None
ERR4816755 Other lineage4.1.1.3 None
SAMN02360570 Pre-XDR-TB lineage2.2.1 None
SAMN02360571 HR-TB lineage2.2.2;lineage2.2.1 None
ERR4816610 RR-TB lineage4.3.3 None
ERR4819086 HR-TB lineage4.6.2.2 None
SAMN02380982 MDR-TB lineage4.3.4.2 None
SAMN02360562 Pre-XDR-TB lineage4.4.2 None
SAMN02398710 MDR-TB lineage2.2.2 None
ERR4817915 RR-TB lineage4.9 None
SAMN02360574 HR-TB lineage2.2.1 None
ERR4818110 Sensitive lineage4.9 None
SAMN02360591 Pre-XDR-TB lineage2.2.2 None
ERR4819051 Other lineage4 None
SAMN02360580 HR-TB lineage2.2.1 None
ERR4818851 RR-TB lineage4.4.1.1 None
SRR5007170 RR-TB lineage4.9 None
ERR4818904 Other lineage4.8 None
SRR5007167 RR-TB lineage4.1.1.3.1 None
ERR3275709 HR-TB lineage3 nl
SAMN02360577 HR-TB lineage3 None
SRR5007161 RR-TB lineage4.1.1.3.1 None
SRR5007168 RR-TB lineage4.9 None
SRR5007169 RR-TB lineage4.8.2 None
ERR4817584 MDR-TB lineage3 None
ERR4819383 RR-TB lineage4.9 None
SRR5341365 Pre-XDR-TB lineage3 None
ERR4819265 HR-TB lineage4.3.4.1 None
SAMN02360563 Pre-XDR-TB lineage2.2.2 None
ERR2517457 Sensitive lineage3 None
ERR4819430 Sensitive lineage4.1.2.1 None
SAMN02360564 Pre-XDR-TB lineage2.2.1 None
ERR4819863 RR-TB lineage4.9 None
ERR4819910 Other lineage4.9 None
SAMN02360585 HR-TB lineage4.5 None
ERR4820410 Pre-XDR-TB lineage3.1.1 None
ERR4819864 RR-TB lineage1.1.3.1 None
ERR4820030 Other lineage4.9 None
ERR4821172 RR-TB lineage4.9 None
SAMN02360579 HR-TB lineage2.2.1.1 None
ERR4821276 Other lineage3 None
ERR4821747 MDR-TB lineage4.9;lineage4.2.1 None
ERR4821704 MDR-TB lineage4.3.3 None
ERR4821272 RR-TB lineage4.1.2.1 None
SRR6045267 RR-TB lineage4 None
SRR6045010 Other lineage4 None
SRR6044780 Other lineage4.9 None
SRR6046609 Sensitive lineage4.9 None
ERR4829238 Sensitive lineage3 None
SRR6046376 Other lineage3 None
SRR6046839 Other lineage4.9 None
SRR6046834 Sensitive lineage4.9 None
ERR502470 RR-TB lineage4.9 None
ERR502478 RR-TB lineage4.9 None
ERR502473 Pre-XDR-TB lineage4.9 None
ERR502474 Pre-XDR-TB lineage4.9 None
ERR502479 RR-TB lineage4.9 None
ERR502481 Pre-XDR-TB lineage4.9 None
ERR502517 MDR-TB lineage5.1.1 None
ERR323108 HR-TB lineage4 None
SRR7131160 Sensitive lineage3 None
ERR1034652 Other None
ERR038289 Other lineage4.3.3 None
ERR1034647 MDR-TB lineage4.1.1.3 None
ERR10796572 Other lineage4.3.4.1 None
ERR10796564 Other lineage4.3.3 None
ERR10796565 RR-TB lineage4.9 None
ERR10796577 RR-TB lineage4.9 None
ERR10796633 RR-TB lineage4.3.4 None
ERR10796591 MDR-TB lineage4.9 None
ERR10796576 RR-TB lineage4.9 None
ERR10796594 Other lineage4.9 None
ERR11465562 Other lineage4.1.2.1 None
ERR3283014 HR-TB None
ERR3283049 Sensitive lineage4.9 None
ERR3283031 HR-TB None
ERR3283028 Other None
ERR3283047 HR-TB None
ERR3283057 HR-TB lineage4 None
ERR212114 Other lineage4.3.4.2.1 None
ERR3797048 HR-TB None
ERR3797065 MDR-TB lineage4 None
ERR3797079 Sensitive lineage4 None
ERR3797064 Sensitive None
ERR3797084 Sensitive lineage4.9 None
ERR3797087 Sensitive lineage4 None
ERR4808964 RR-TB lineage2.2.1 None
ERR4809333 Pre-XDR-TB lineage2.2.2 None
ERR5987263 MDR-TB lineage2.2.1 None
ERR736856 HR-TB lineage4 None
ERR3439265 Other lineage4.9 None
ERR3439489 RR-TB La1.8.1 None
ERR3797063 HR-TB None
ERR751317 Sensitive lineage4.9 None
ERR9119733 MDR-TB lineage2.2.1 None
ERR9117740 Other lineage3.1.1 None
ERR9786164 RR-TB lineage4.1.1.3 None
SRR1013553 Pre-XDR-TB lineage2.2 None
SRR1013568 Pre-XDR-TB lineage2.2 None
SRR1013554 Pre-XDR-TB lineage2.2 None
SRR1013581 Pre-XDR-TB lineage2.2 None
SRR1013567 Pre-XDR-TB lineage2.2.2 None
SRR1013569 Pre-XDR-TB lineage2.2.1 None
SRR1013578 MDR-TB lineage2.2 None
SRR1013566 Pre-XDR-TB lineage4.4.2 None
SRR1013570 Pre-XDR-TB lineage2.2.1 None
SRR1013577 MDR-TB lineage2.2 None
SRR1013582 Pre-XDR-TB lineage2.2.1 None
SRR1013583 HR-TB lineage2.2 None
SRR1013597 HR-TB lineage2.2 None
SRR1013584 HR-TB lineage2.2 None
SRR1013590 HR-TB lineage2.2.1 None
SRR1013596 HR-TB lineage3 None
SRR1013589 HR-TB lineage2.2.1 None
SRR1013595 HR-TB lineage3 None
SRR1013600 HR-TB lineage2.2.1.1 None
SRR1013599 HR-TB None
SRR1013598 HR-TB None
SRR1013603 HR-TB lineage2.2.1 None
SRR1013601 HR-TB lineage2.2.1 None
SRR1013607 HR-TB lineage2.2 None
SRR1013608 HR-TB lineage2.2 None
SRR1013602 HR-TB lineage2.2.1 None
SRR1013609 HR-TB lineage4 None
SRR1013613 HR-TB lineage2.2.1 None
SRR1013611 HR-TB lineage4 None
SRR1013604 HR-TB lineage2.2.1 None
SRR1013610 HR-TB lineage4 None
SRR1013614 HR-TB lineage2.2 None
SRR1013617 MDR-TB None
SRR1013633 MDR-TB lineage2.2 None
SRR1013621 Pre-XDR-TB lineage2.2 None
SRR1013629 Pre-XDR-TB lineage2.2 None
SRR1013618 MDR-TB None
SRR1013622 Pre-XDR-TB lineage2.2 None
SRR1013630 Pre-XDR-TB lineage2.2 None
SRR1013634 MDR-TB lineage2.2 None
SRR1047993 HR-TB lineage2.2.1 None
SRR1048852 Pre-XDR-TB lineage4.9 None
SRR1047996 MDR-TB lineage2.2.2 None
SRR1048867 Pre-XDR-TB lineage2.2.2 None
SRR1048853 Pre-XDR-TB lineage4;lineage2.2.2 None
SRR1048865 Pre-XDR-TB lineage4.4.2 None
SRR1048868 Pre-XDR-TB lineage2.2.2 None
SRR1048866 Pre-XDR-TB lineage4.4.2 None
SRR1048870 Pre-XDR-TB lineage2.2 None
SRR1048869 Pre-XDR-TB lineage2.2.2 None
SRR1048966 Pre-XDR-TB lineage2.2.1 None
SRR1048886 MDR-TB lineage2.2 None
SRR1048885 MDR-TB None
SRR1048965 Pre-XDR-TB lineage2.2.1 None
SRR1048975 HR-TB lineage2.2.1 None
SRR1048969 MDR-TB lineage2.2.2 None
SRR1048968 HR-TB lineage2.2.2;lineage2.2.1 None
SRR1048974 HR-TB lineage2.2.1 None
SRR1048985 HR-TB lineage2.2.1 None
SRR1048980 HR-TB lineage3 None
SRR1048983 HR-TB None
SRR1048987 HR-TB lineage2.2.1 None
SRR1048986 HR-TB lineage2.2.1 None
SRR1048988 HR-TB lineage2.2 None
SRR1048992 HR-TB lineage2.2.2 None
SRR1048991 HR-TB lineage2.2.2 None
SRR1048997 HR-TB lineage2.2.1 None
SRR1048994 HR-TB lineage4.9 None
SRR1048996 HR-TB lineage4.5 None
SRR1048993 HR-TB lineage4.9 None
SRR1048995 HR-TB lineage4.5 None
SRR1049005 MDR-TB lineage2.2.2 None
SRR1049004 MDR-TB lineage2.2.2 None
SRR1048998 HR-TB lineage2.2.1 None
SRR1049007 Pre-XDR-TB lineage2.2.2 None
SRR1049023 HR-TB lineage2.2 None
SRR1049006 MDR-TB lineage2.2.2 None
SRR1049022 HR-TB lineage4.9;lineage2 None
SRR1049027 Pre-XDR-TB None
SRR1049026 Pre-XDR-TB None
SRR1049040 MDR-TB lineage2.2.1 None
SRR1049672 Other lineage3 None
SRR1049559 MDR-TB lineage4.3.4.2.1 None
SRR1049041 MDR-TB None
SRR1049560 MDR-TB lineage4.3.4.2.1 None
SRR1049726 MDR-TB lineage4.4.1.1;lineage4.1.2.1 None
SRR1049725 RR-TB lineage4.1.2.1 None
SRR1049673 Pre-XDR-TB lineage3 None
SRR1144809 HR-TB lineage2.2.1 None
SRR1062871 MDR-TB lineage4.3.4.2.1 None
SRR1062918 Pre-XDR-TB lineage3 None
SRR1062928 RR-TB lineage4 None
SRR1140716 Pre-XDR-TB lineage3 None
SRR1140753 MDR-TB lineage4.3.4.2.1 None
SRR1144744 HR-TB lineage2.2.1 None
SRR1144759 MDR-TB lineage2.2 None
SRR10993951 RR-TB La1.6 None
SRR1140736 RR-TB None
SRR1173185 HR-TB lineage4.9 None
SRR1173170 Other lineage4.9 None
SRR1172066 Sensitive lineage4.9 None
SRR1173450 RR-TB lineage4.9 None
SRR1173740 Other None
SRR1173770 Other lineage4.9 None