EBG00000313325 - n.629C>G
Drug resistance types
12 Sensitive
19 RR-TB
3 HR-TB
17 MDR-TB
11 Pre-XDR-TB
1 XDR-TB
26 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage2.2.1 | 17 |
| lineage4.1.1.3 | 2 |
| La1.7.1 | 1 |
| lineage2.2.2 | 4 |
| lineage4.8 | 8 |
| lineage2.2.1.1 | 2 |
| lineage4.9 | 22 |
| lineage3.1.2.1 | 2 |
| lineage2.2.1;lineage4 | 1 |
| lineage4.2.2 | 1 |
| lineage3.1.2 | 1 |
| lineage6 | 2 |
| lineage4.2.1 | 2 |
| lineage3.1.2.1;lineage4.9 | 1 |
| lineage4.3.3;lineage4.9 | 1 |
| lineage4.3.3 | 2 |
| lineage4.4.1.1.1 | 2 |
| lineage4.8.1 | 1 |
| lineage4.2.2.2 | 2 |
| lineage4.3 | 1 |
| lineage3 | 1 |
| lineage4.1.2.1 | 1 |
| lineage3;lineage4 | 1 |
| lineage1.2.1.1 | 1 |
| lineage4.5 | 1 |
| lineage4.1.3 | 1 |
| lineage4.1.2 | 2 |
| La1.6 | 1 |
| lineage4.1.1.1 | 1 |
| lineage4.4 | 1 |
| lineage4.3.4.1 | 1 |
| lineage4.4.1.1 | 1 |
| La2 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 89 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR11972417 | MDR-TB | lineage2.2.1 | None | SRR18911231 | Sensitive | lineage4.1.1.3 | None | SRR21469201 | Other | La1.7.1 | None | SRR18003004 | Pre-XDR-TB | lineage2.2.2 | None | ERR978767_ERR978765_ERR978766 | RR-TB | lineage4.8 | None | SRR18909918 | Other | lineage2.2.1.1 | None | SRR3619841 | Pre-XDR-TB | lineage2.2.1 | None | DRR185024 | Other | lineage2.2.2 | None | ERR10796598 | Other | lineage4.9 | None | SRR5818388 | Other | lineage4.9 | None | SRR7070195 | Sensitive | lineage3.1.2.1 | None | SRR22424778 | RR-TB | lineage2.2.1.1 | None | SRR5818411 | RR-TB | lineage4.9 | None | ERR978765 | RR-TB | lineage4.8 | None | SRR5818395 | Sensitive | lineage4.9 | None | ERR867568 | Other | lineage2.2.1;lineage4 | None | SRR7069800 | Other | lineage3.1.2.1 | None | SAMEA3501073 | RR-TB | lineage4.8 | None | SRR3675552 | Other | lineage4.9 | None | SRR3618864 | Pre-XDR-TB | lineage2.2.1 | None | SRR3601585 | Pre-XDR-TB | lineage2.2.1 | None | ERR108125 | RR-TB | lineage4.9 | None | ERR867574 | Other | lineage4.9 | None | SRR5818399 | Sensitive | lineage4.9 | None | DRR188816 | Sensitive | lineage4.2.2 | None | DRR184982 | Other | lineage2.2.1 | None | ERR2886463 | Sensitive | lineage2.2.1 | None | ERR2027250 | Other | lineage3.1.2 | None | ERR3806588 | Other | lineage6 | None | ERR867541 | MDR-TB | lineage4.2.1 | None | ERR2027290 | Other | lineage3.1.2.1;lineage4.9 | None | SRR10315556 | Sensitive | lineage2.2.1 | None | SRR11342636 | MDR-TB | lineage4.3.3;lineage4.9 | None | SRR11342649 | MDR-TB | lineage4.3.3 | None | SRR11342696 | MDR-TB | lineage4.4.1.1.1 | None | SRR11342644 | MDR-TB | lineage4.4.1.1.1 | None | SRR11342662 | MDR-TB | lineage4.8.1 | None | SRR5818449 | MDR-TB | lineage4.9 | None | SRR11972425 | Pre-XDR-TB | lineage2.2.1 | None | ERR867538 | Other | lineage4.2.2.2 | None | ERR867542 | HR-TB | lineage4.3 | None | SRR5818397 | Other | lineage4.9 | None | SRR5818429 | Sensitive | lineage4.9 | None | ERR3797065 | RR-TB | lineage4.9 | None | SRR1735598 | RR-TB | lineage4.9 | None | ERR867570 | RR-TB | lineage4.9 | None | SRR18002947 | MDR-TB | lineage2.2.1 | None | SRR3619764 | Pre-XDR-TB | lineage2.2.1 | None | ERR867575 | Other | lineage4.9 | None | SRR6045267 | RR-TB | lineage4.8 | None | ERR867567 | RR-TB | lineage3 | None | ERR2027257 | Other | lineage4.1.2.1 | None | ERR2229198 | Sensitive | lineage4.8 | None | SRR3675230 | Other | lineage3;lineage4 | None | ERR2027209 | MDR-TB | lineage1.2.1.1 | None | ERR4816548 | HR-TB | lineage4.5 | None | SRR18003047 | MDR-TB | lineage2.2.1 | None | ERR867522 | Pre-XDR-TB | lineage2.2.1 | None | ERR867525 | Pre-XDR-TB | lineage2.2.1 | None | ERR9787033 | Sensitive | lineage6 | None | ERR9992784 | XDR-TB | lineage2.2.2 | None | SRR11342687 | RR-TB | lineage4.2.2.2 | None | SRR11342664 | MDR-TB | lineage2.2.2 | None | SRR11342671 | RR-TB | lineage4.1.3 | None | SRR11342647 | MDR-TB | lineage4.1.1.3 | None | SRR11342658 | RR-TB | lineage4.1.2 | None | SRR11342686 | MDR-TB | lineage4.8 | None | ERR867523 | Pre-XDR-TB | lineage2.2.1 | None | SRR10993951 | RR-TB | La1.6 | None | SRR11342642 | MDR-TB | lineage4.1.1.1 | None | SRR11342682 | Other | lineage4.1.2 | None | SRR11342660 | MDR-TB | lineage2.2.1 | None | SRR16627752 | RR-TB | lineage4.4 | None | SRR14801652 | HR-TB | lineage4.3.3 | None | ERR978766 | RR-TB | lineage4.8 | None | ERR867571 | Other | lineage4.9 | None | ERR867573 | Other | lineage4.9 | None | SRR16156804 | Sensitive | lineage4.9 | None | SRR5818435 | Sensitive | lineage4.9 | None | ERR867569 | Other | lineage4.9 | None | SRR5818460 | Other | lineage4.9 | None | ERR867554 | Other | lineage4.3.4.1 | None | ERR867572 | Other | lineage4.9 | None | ERR9896153 | RR-TB | lineage4.4.1.1 | None | SRR13888750 | Other | La2 | None | ERR867526 | MDR-TB | lineage2.2.1 | None | ERR867524 | Pre-XDR-TB | lineage4.2.1 | None | ERR867527 | Pre-XDR-TB | lineage2.2.1 | None | ERR978767 | RR-TB | lineage4.8 | None |
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