EBG00000313339 - n.1263G>A
Drug resistance types
141 Sensitive
6 RR-TB
11 HR-TB
30 MDR-TB
23 Pre-XDR-TB
1 XDR-TB
38 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage2.2.2 | 14 |
| lineage4.9 | 53 |
| 1 | |
| lineage4.3.4.2.1 | 14 |
| lineage2.2.1 | 34 |
| La1.7.1 | 1 |
| lineage4.3.2.1 | 3 |
| lineage3.1.2.1 | 4 |
| lineage4.3.4.1 | 6 |
| lineage6.1.1 | 1 |
| La1.8.1 | 9 |
| lineage1.1.2 | 3 |
| lineage4.4.2 | 3 |
| lineage3 | 4 |
| lineage4.8 | 6 |
| lineage4.1.1.3 | 5 |
| lineage4.3.3;lineage4.8 | 4 |
| lineage4.1.1.2 | 1 |
| lineage1.1.3.2 | 6 |
| lineage4 | 2 |
| lineage4.4.1.2 | 2 |
| lineage1.1.1 | 2 |
| La3;M.canetti;lineage2.1;lineage4.9 | 1 |
| lineage5.1.1 | 3 |
| lineage4.1.2.1.1 | 1 |
| lineage4.1.2 | 7 |
| lineage4.1.2.1 | 6 |
| lineage3.1.1;lineage4.3.2.1 | 1 |
| La1.4 | 1 |
| lineage2.2.2;lineage4.9 | 1 |
| lineage1.2.2.2 | 2 |
| lineage4.5 | 2 |
| lineage4.9.1 | 2 |
| lineage1.1.2;lineage4.3.4.1 | 1 |
| lineage4.4.1.1 | 1 |
| lineage4.2.1 | 3 |
| lineage2.2.1;lineage4.9 | 1 |
| lineage1.2.2.1 | 1 |
| lineage4.4.1.1.1 | 1 |
| lineage3.1.1 | 7 |
| La1.3 | 3 |
| lineage4.3.4.2 | 1 |
| lineage4.3.3 | 4 |
| lineage4.3;lineage4.9 | 1 |
| lineage4.6.1.2 | 1 |
| lineage1.1 | 1 |
| lineage2;lineage4.9 | 2 |
| lineage2.2.1.1 | 2 |
| lineage5.1.4 | 1 |
| lineage1.2.1.2.1 | 1 |
| lineage4.1.1.1 | 1 |
| La1.2 | 1 |
| lineage4.2.1.1 | 1 |
| lineage4.3.4.1;lineage4.9 | 1 |
| lineage4.6.1.1 | 1 |
| lineage5.1.2 | 1 |
| lineage4.9;lineage5.1.1 | 1 |
| lineage4.2.2.2 | 2 |
| lineage1.1.3.1 | 1 |
| M.canetti;lineage2.1;lineage4.9 | 1 |
| La1.8.1;lineage4 | 1 |
| La1.6 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 250 |
Geographic prevalence
Country level data for this variant is available for 3 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR1173848 | Pre-XDR-TB | lineage2.2.2 | None | SRR6044925 | Sensitive | lineage4.9 | None | ERR144568 | Sensitive | None | SRR6982099 | Sensitive | lineage4.3.4.2.1 | None | SRR6982178 | Sensitive | lineage2.2.1 | None | SRR1792247 | Other | La1.7.1 | None | ERR6052085 | Pre-XDR-TB | lineage2.2.2 | None | SRR4037619 | Sensitive | lineage4.3.2.1 | None | SRR1172751 | HR-TB | lineage3.1.2.1 | None | SRR1175472 | RR-TB | lineage4.3.4.1 | None | ERR473304 | Sensitive | lineage2.2.1 | None | ERR405191 | Sensitive | lineage4.9 | None | SRR6981993 | Sensitive | lineage4.3.2.1 | None | ERR1023250 | Sensitive | lineage6.1.1 | None | ERR212033 | Other | lineage4.9 | None | ERR4188021 | Other | La1.8.1 | None | SRR12882699 | Sensitive | lineage1.1.2 | None | ERR1034638 | Pre-XDR-TB | lineage2.2.1 | None | SRR15316595 | RR-TB | lineage4.4.2 | None | SRR5341430 | Other | lineage3 | None | SRR3725586 | Sensitive | lineage4.9 | None | SRR11972390 | MDR-TB | lineage2.2.1 | None | ERR108424 | Sensitive | lineage4.8 | None | SRR3725591 | Sensitive | lineage4.9 | None | SRR3725587 | Sensitive | lineage4.9 | None | ERR176450 | Sensitive | lineage4.1.1.3 | None | SRR1167291 | Pre-XDR-TB | lineage2.2.2 | None | SRR1049676 | MDR-TB | lineage4.3.3;lineage4.8 | None | ERR176475 | Sensitive | lineage4.3.4.2.1 | None | SRR7645800 | MDR-TB | lineage2.2.1 | None | ERR8975044 | Other | lineage4.1.1.2 | None | SAMN02599156 | HR-TB | lineage3.1.2.1 | None | SRR10315751 | MDR-TB | lineage4.8 | None | ERR1873549 | Pre-XDR-TB | lineage2.2.2 | None | ERR181750 | Sensitive | lineage1.1.3.2 | None | SRR5341462 | Pre-XDR-TB | lineage3.1.2.1 | None | ERR2179850 | Sensitive | lineage4 | None | ERR736822 | Sensitive | lineage4.4.1.2 | None | ERR161184 | Sensitive | lineage4.3.4.2.1 | None | SRR5341460 | Other | lineage3 | None | ERR5758436 | Other | lineage2.2.2 | None | ERR5311088 | Sensitive | La1.8.1 | None | ERR736879 | Sensitive | lineage1.1.3.2 | None | ERR323068 | Sensitive | lineage4.9 | None | ERR751729 | Other | lineage1.1.1 | None | ERR161150 | Sensitive | lineage4.3.4.2.1 | None | SAMN02350437 | MDR-TB | lineage4.8 | None | ERR1873446 | Pre-XDR-TB | lineage4.1.1.3 | None | ERR4188213 | Other | La1.8.1 | None | ERR323036 | MDR-TB | La3;M.canetti;lineage2.1;lineage4.9 | None | ERR133816 | MDR-TB | lineage2.2.1 | None | ERR161170 | Sensitive | lineage4.3.4.1 | None | SRR22175227 | HR-TB | lineage3 | None | ERR502480 | Other | lineage5.1.1 | None | ERR760877 | MDR-TB | lineage4.1.2.1.1 | None | SRR1181085 | Sensitive | lineage4.1.2 | None | SRR4034391 | MDR-TB | lineage4.1.2.1 | None | ERR245795 | Sensitive | lineage3.1.1;lineage4.3.2.1 | None | SRR16278273 | Other | La1.4 | None | SRR1180319 | Sensitive | lineage4.9 | None | SRR124452 | Sensitive | lineage2.2.2;lineage4.9 | None | ERR405217 | Sensitive | lineage2.2.1 | None | ERR221608 | Sensitive | lineage1.2.2.2 | None | SRR6824550 | Sensitive | lineage4.5 | None | ERR245810 | Sensitive | lineage4.9.1 | None | ERR036233 | Sensitive | lineage1.1.2;lineage4.3.4.1 | None | ERR176739 | Sensitive | lineage4.4.1.1 | None | SRR1181242 | Sensitive | lineage4.1.2 | None | ERR6052110 | Pre-XDR-TB | lineage2.2.2 | None | SRR13423546 | Other | lineage4.4.2 | None | ERR10762248 | MDR-TB | lineage4.2.1 | None | ERR1873461 | Pre-XDR-TB | lineage2.2.2 | None | SRR1184114 | Sensitive | lineage2.2.1;lineage4.9 | None | SRR1184329 | Other | lineage4.9 | None | SRR1181319 | Sensitive | lineage2.2.1 | None | SRR17406750 | Other | lineage1.1.2 | None | SRR3725589 | Sensitive | lineage4.9 | None | SAMN03246352 | Pre-XDR-TB | lineage2.2.1 | cn | ERR190332 | Sensitive | lineage4.3.4.1 | None | SRR1011488 | Sensitive | lineage2.2.1 | None | ERR216950 | Sensitive | lineage1.1.3.2 | None | ERR5311076 | Other | La1.8.1 | None | SRR1175491 | MDR-TB | lineage4.3.4.1 | None | SRR124451 | Sensitive | lineage2.2.2 | None | SRR1196478 | Other | lineage4.9 | None | ERR1873437 | HR-TB | lineage2.2.2 | None | ERR221569 | Sensitive | lineage1.2.2.1 | mw | ERR245740 | Sensitive | lineage4.1.2 | None | SRR14801294 | MDR-TB | lineage2.2.1 | None | ERR7821131 | MDR-TB | lineage4.4.1.1.1 | None | ERR216902 | Sensitive | lineage1.1.3.2 | None | SRR6982213 | Sensitive | lineage4.3.2.1 | None | ERR323061 | Sensitive | lineage4.9 | None | ERR405190 | Sensitive | lineage4.9 | None | SRR1140574 | MDR-TB | lineage4.3.3;lineage4.8 | None | ERR1082134 | Sensitive | lineage5.1.1 | None | SRR1181136 | Sensitive | lineage2.2.1 | None | SRR1183276 | Other | lineage4.9 | None | SRR3725588 | Sensitive | lineage4.9 | None | SRR3725596 | Sensitive | lineage4.9 | None | ERR779662 | Sensitive | lineage3.1.1 | None | ERR5162090 | RR-TB | lineage4.9 | None | ERR216930 | Sensitive | lineage4.3.4.1 | None | SRR14782537 | Pre-XDR-TB | lineage2.2.1 | None | SRR11972425 | Pre-XDR-TB | lineage2.2.1 | None | ERR4769428 | Sensitive | La1.3 | None | ERR1063882 | Sensitive | lineage4.3.4.2 | None | ERR181940 | Sensitive | lineage3.1.1 | None | SRR21239778 | Sensitive | lineage4.3.3 | None | ERR4187916 | Other | La1.8.1 | None | ERR736808 | Sensitive | lineage2.2.1 | None | ERR1873463 | MDR-TB | lineage2.2.2 | None | SRR4034393 | MDR-TB | lineage4.1.2.1 | None | ERR751317 | Sensitive | lineage4.9 | None | ERR245764 | HR-TB | lineage3.1.1 | None | ERR176780 | Sensitive | lineage4.9 | None | ERR4769467 | Sensitive | lineage4.9 | None | ERR718268 | Sensitive | lineage1.1.1 | None | SRR3725590 | Sensitive | lineage4.9 | None | SRR1011480 | MDR-TB | lineage4.8 | None | ERR161125 | Sensitive | lineage4 | None | SRR3725594 | Sensitive | lineage4.9 | None | SRR4033203 | Sensitive | lineage4.9 | None | ERR212042 | HR-TB | lineage3.1.1 | None | SRR1180237 | Sensitive | lineage4.1.2 | None | ERR2653138 | MDR-TB | lineage4.1.2.1 | None | ERR176781 | Sensitive | lineage1.1.3.2 | None | SRR1181351 | Sensitive | lineage4.9 | None | ERR4188381 | Other | La1.8.1 | None | SRR3725585 | Sensitive | lineage4.9 | None | ERR970449 | RR-TB | lineage4.1.1.3 | None | ERR036207 | Other | lineage4.3;lineage4.9 | None | SRR1723610 | Pre-XDR-TB | lineage2.2.1 | None | SRR14782096 | MDR-TB | lineage2.2.1 | None | SRR7535044 | Pre-XDR-TB | lineage4.6.1.2 | None | ERR2179737 | HR-TB | lineage4.2.1 | None | ERR181749 | Sensitive | lineage4.3.4.2.1 | None | SRR1049677 | MDR-TB | lineage4.3.3;lineage4.8 | None | ERR161014 | Sensitive | lineage4.3.4.2.1 | None | SRR1062851 | MDR-TB | lineage4.8 | None | SRR1172807 | Sensitive | lineage4.9 | None | ERR190339 | Sensitive | lineage4.3.4.2.1 | None | ERR216949 | Sensitive | lineage4.3.4.1 | None | SRR1175474 | Other | lineage4.9 | None | SRR1175173 | HR-TB | lineage3.1.2.1 | None | ERR212109 | Sensitive | lineage1.2.2.2 | None | ERR4769537 | Sensitive | lineage4.9 | None | SRR6832659 | Other | lineage4.2.1 | None | ERR775800 | Sensitive | lineage1.1 | th | ERR1063847 | Sensitive | lineage3.1.1 | None | ERR10762495 | MDR-TB | lineage2.2.1 | None | SRR1180946 | Sensitive | lineage2;lineage4.9 | None | SRR3725599 | Sensitive | lineage4.9 | None | SRR10869074 | Sensitive | lineage2.2.1.1 | None | SRR10869143 | Pre-XDR-TB | lineage2.2.1 | None | SRR1172717 | Sensitive | lineage4.9 | None | ERR212082 | Sensitive | lineage4.9.1 | None | ERR702423 | Sensitive | lineage5.1.4 | None | ERR216986 | Sensitive | lineage4.3.4.2.1 | None | ERR3797007 | Other | La1.8.1 | None | ERR4188395 | Sensitive | La1.8.1 | None | SRR3725592 | Sensitive | lineage4.9 | None | ERR6336794 | Sensitive | lineage1.2.1.2.1 | None | SRR21737226 | Sensitive | lineage4.5 | None | SRR1173781 | Pre-XDR-TB | lineage2.2.2 | None | SAMN02350446 | Sensitive | lineage2.2.1 | None | SRR8758877 | MDR-TB | lineage4.1.1.1 | None | ERR1063873 | Sensitive | lineage4.3.4.2.1 | None | SRR6045957 | Other | lineage4.9 | None | ERR1203071 | Sensitive | lineage4.8 | None | ERR4772210 | Other | La1.2 | None | SRR11972378 | MDR-TB | lineage1.1.2 | None | SRR1173185 | Other | lineage4.9 | None | SRR6785281 | Other | lineage4.2.1.1 | None | SRR3725597 | Sensitive | lineage4.9 | None | ERR323048 | Sensitive | lineage4.9 | None | SRR6982053 | Sensitive | lineage4.3.4.1;lineage4.9 | None | ERR473303 | Sensitive | lineage4.9 | None | SRR1182994 | Sensitive | lineage4.1.2 | None | ERR176547 | Sensitive | lineage4.6.1.1 | None | ERR473278 | Sensitive | lineage4.9 | None | SRR10482948 | Other | La1.8.1 | None | ERR5311086 | Sensitive | lineage4.9 | None | ERR751339 | Sensitive | lineage5.1.2 | None | SRR12420276 | MDR-TB | lineage2.2.1 | None | ERR1082121 | Sensitive | lineage4.9;lineage5.1.1 | None | ERR4187921 | Sensitive | lineage4.9 | None | SRR3725598 | Sensitive | lineage4.9 | None | ERR773806 | Sensitive | lineage2.2.1 | None | ERR736805 | Sensitive | lineage2.2.1 | None | ERR2660499 | Sensitive | lineage4.1.1.3 | None | ERR161201 | Sensitive | lineage1.1.3.2 | None | ERR038289 | Other | lineage4.3.3 | None | ERR3283046 | Sensitive | lineage4.9 | None | SRR1181402 | Sensitive | lineage4.9 | None | ERR1063890 | Sensitive | lineage3.1.1 | None | ERR4769433 | RR-TB | lineage4.9 | None | ERR4872322 | Pre-XDR-TB | lineage2.2.1 | None | ERR161045 | Sensitive | lineage4.3.4.2.1 | None | ERR212003 | Sensitive | lineage4.3.4.2.1 | None | SRR6982471 | Sensitive | lineage2.2.1 | None | ERR4769482 | Sensitive | lineage4.9 | None | ERR1873561 | XDR-TB | lineage2.2.2 | None | ERR190388 | Sensitive | lineage4.9 | None | ERR1465744 | Sensitive | lineage4.1.2.1 | None | ERR987719 | HR-TB | lineage3 | None | ERR6397161 | Other | lineage4.2.2.2 | None | SRR1062859 | Sensitive | lineage2.2.1 | None | SRR12199461 | Sensitive | lineage1.1.3.1 | None | ERR4769549 | Sensitive | lineage4.9 | None | ERR4769393 | Sensitive | lineage4.9 | None | SAMN02403471 | Pre-XDR-TB | lineage2.2.2 | None | SRR1062920 | MDR-TB | lineage4.3.3;lineage4.8 | None | ERR502494 | Other | lineage5.1.1 | None | SRR10869318 | Sensitive | lineage2.2.1 | None | ERR4769470 | Sensitive | lineage4.9 | None | SRR1062820 | Pre-XDR-TB | lineage2.2.1 | None | ERR161033 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | SRR3725595 | Sensitive | lineage4.9 | None | ERR4187819 | Sensitive | La1.8.1;lineage4 | None | SRR8346061 | RR-TB | lineage2.2.1 | None | SRR1011450 | Pre-XDR-TB | lineage2.2.1 | None | SRR2100067 | Other | lineage4.3.3 | None | SRR10993957 | Other | La1.6 | None | SRR3725593 | Sensitive | lineage4.9 | None | SRR6397389 | Sensitive | lineage4.1.2.1 | None | ERR4769471 | Other | La1.3 | None | SRR6046752 | Sensitive | lineage4.2.2.2 | None | ERR1873406 | Sensitive | lineage2;lineage4.9 | None | SRR5074094 | HR-TB | lineage2.2.1.1 | None | ERR323116 | Sensitive | lineage4.3.4.2.1 | None | SRR124453 | HR-TB | lineage2.2.2 | None | SRR3618864 | Pre-XDR-TB | lineage2.2.1 | None | ERR036242 | Sensitive | lineage4.3.4.2.1 | None | ERR108476 | Sensitive | lineage4.1.2.1 | None | ERR4769462 | Other | La1.3 | None | ERR137226 | MDR-TB | lineage2.2.1 | None | SRR1238557 | Other | lineage4.9 | None | SRR1183179 | Other | lineage4.9 | None | SRR12634609 | MDR-TB | lineage3.1.1 | None | SRR3619841 | Pre-XDR-TB | lineage2.2.1 | None | SRR21240029 | Sensitive | lineage4.3.3 | None | SRR6153231 | Sensitive | lineage4.4.1.2 | None | ERR4817915 | Other | lineage4.9 | None | ERR161173 | Sensitive | lineage4.3.4.2.1 | None | ERR1034647 | MDR-TB | lineage4.1.1.3 | None | SAMN02350409 | Pre-XDR-TB | lineage2.2.1 | None | ERR163988 | Sensitive | lineage4.1.2 | None | SAMN02585942 | Sensitive | lineage4.1.2 | None | SRR6824603 | Sensitive | lineage4.4.2 | None |
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