EBG00000313339 - n.1263G>A
Drug resistance types
148 Sensitive
12 RR-TB
20 HR-TB
44 MDR-TB
29 Pre-XDR-TB
1 XDR-TB
83 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.1.2.1 | 12 |
| lineage4.5 | 4 |
| lineage3 | 5 |
| lineage4.3.4.2.1 | 18 |
| lineage4.3.4.1 | 3 |
| lineage4.9 | 40 |
| lineage1.1.3.2 | 6 |
| lineage4.3.3 | 9 |
| lineage3.1.1 | 9 |
| 13 | |
| lineage2.2 | 4 |
| lineage4.3.4 | 1 |
| lineage2.2.1 | 41 |
| lineage4.1.2 | 8 |
| lineage4.9.1 | 3 |
| lineage4.4.1.1 | 4 |
| lineage4.1.1 | 3 |
| lineage4.6.1.1 | 1 |
| lineage4 | 7 |
| lineage2.2.2 | 9 |
| lineage1.2.2.2 | 4 |
| lineage3.1.2.1 | 4 |
| lineage1.2.2.1 | 1 |
| lineage4.8 | 7 |
| lineage4.2 | 1 |
| lineage4.1.1.3 | 7 |
| lineage2.2.1.1 | 3 |
| lineage4.3.2.1 | 5 |
| lineage4.3.2.1;lineage3.1.1 | 1 |
| lineage4.2.2.2 | 3 |
| lineage3.1.2 | 1 |
| lineage1.1.2 | 5 |
| lineage4.4.1.1.1 | 3 |
| lineage4.6.2.2 | 2 |
| lineage5.1.1 | 4 |
| lineage4.2.1.1 | 1 |
| lineage4.4.1.2 | 2 |
| lineage4.2.1 | 2 |
| lineage4.4.2 | 4 |
| lineage4.9;lineage4.3.4.1 | 1 |
| lineage5.1.4 | 2 |
| La1.8.1 | 37 |
| lineage4.9;La1.8.1 | 1 |
| lineage4.6.1.2 | 2 |
| lineage4;lineage2 | 1 |
| lineage4.3.4.1;lineage1.1.2 | 1 |
| lineage4.3.4.2 | 1 |
| lineage4;La1 | 1 |
| La1.8 | 1 |
| La1.3 | 3 |
| La1 | 1 |
| La1.2 | 2 |
| lineage1.2.1.2.1 | 1 |
| lineage1.1.1 | 3 |
| lineage5.1.2 | 1 |
| lineage4.1.2.1.1 | 1 |
| lineage1.1 | 1 |
| lineage4.1.1.2 | 1 |
| lineage4.7 | 1 |
| lineage4.8;lineage4.3.3 | 4 |
| La1.6 | 1 |
| lineage4.9;lineage4.4.2 | 1 |
| lineage1.1.3.1 | 1 |
| lineage2 | 1 |
| La1.7.1 | 5 |
| La1.4 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 337 |
Geographic prevalence
Country level data for this variant is available for 8 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR21722120 | Sensitive | lineage4.1.2.1 | None | SRR21737226 | Sensitive | lineage4.5 | None | SRR22175227 | Pre-XDR-TB | lineage3 | None | ERR190339 | Sensitive | lineage4.3.4.2.1 | None | ERR1465744 | Sensitive | lineage4.1.2.1 | None | ERR190332 | Sensitive | lineage4.3.4.1 | None | ERR176780 | Sensitive | lineage4.9 | None | ERR176781 | Sensitive | lineage1.1.3.2 | None | SRR22424851 | MDR-TB | lineage4.3.3 | None | ERR181940 | Sensitive | lineage3.1.1 | None | ERR161033 | HR-TB | None | ERR161014 | Sensitive | lineage4.3.4.2.1 | None | ERR161022 | Sensitive | lineage4.3.4.2.1 | None | ERR161045 | Sensitive | lineage4.3.4.2.1 | None | SRR3601585 | Pre-XDR-TB | lineage2.2 | None | ERR161125 | Sensitive | lineage4.3.4 | None | ERR161170 | Sensitive | lineage4.3.4.1 | None | ERR161150 | Sensitive | lineage4.3.4.2.1 | None | ERR161173 | Sensitive | lineage4.3.4.2.1 | None | SRR3619841 | Pre-XDR-TB | lineage2.2.1 | None | ERR161184 | Sensitive | lineage4.3.4.2.1 | None | ERR161201 | Sensitive | lineage1.1.3.2 | None | SRR3619764 | Pre-XDR-TB | lineage2.2 | None | ERR163988 | Sensitive | lineage4.1.2 | None | SRR3618864 | Pre-XDR-TB | lineage2.2.1 | None | ERR181750 | Sensitive | lineage1.1.3.2 | None | ERR181749 | Sensitive | lineage4.3.4.2.1 | None | ERR1750894 | Sensitive | lineage4.9.1 | zw | ERR1750889 | Other | lineage4.4.1.1 | None | ERR176739 | Sensitive | lineage4.4.1.1 | None | ERR176475 | Sensitive | lineage4.3.4.2.1 | None | ERR176672 | Sensitive | lineage4.3.4.2.1 | None | ERR176450 | Sensitive | lineage4.1.1 | None | ERR176547 | Sensitive | lineage4.6.1.1 | None | ERR2179850 | Sensitive | lineage4 | None | ERR1873463 | MDR-TB | lineage2.2.2 | None | ERR212003 | Sensitive | lineage4.3.4.2.1 | None | ERR212033 | HR-TB | None | ERR212042 | HR-TB | lineage3.1.1 | None | ERR212082 | Sensitive | lineage4.9.1 | None | SRR1723934 | MDR-TB | lineage4.5 | None | ERR212109 | Sensitive | lineage1.2.2.2 | None | SAMN02599156 | HR-TB | lineage3.1.2.1 | None | ERR216902 | Sensitive | lineage1.1.3.2 | None | ERR216930 | Sensitive | lineage4.3.4.1 | None | ERR216949 | Sensitive | lineage4 | None | ERR216950 | Other | lineage1.1.3.2 | None | ERR216986 | Sensitive | lineage4.3.4.2.1 | None | ERR190388 | Sensitive | lineage4.9 | None | ERR1873561 | Pre-XDR-TB | lineage2.2.2 | None | SAMN02403471 | Pre-XDR-TB | lineage2.2.2 | None | ERR4817204 | RR-TB | lineage4.9 | None | SRR4033203 | Sensitive | lineage4.9 | None | ERR221569 | Sensitive | lineage1.2.2.1 | mw | ERR221608 | Sensitive | lineage1.2.2.2 | None | ERR221583 | Sensitive | lineage4.1.2 | None | SRR4034393 | MDR-TB | lineage4.1.2.1 | None | SAMN02350437 | MDR-TB | lineage4.8 | None | SRR4034391 | MDR-TB | lineage4.1.2.1 | None | ERR2179737 | HR-TB | lineage4.2 | None | ERR1873446 | Pre-XDR-TB | lineage4.1.1.3 | None | ERR4817915 | RR-TB | lineage4.9 | None | ERR245716 | Sensitive | lineage2.2.1 | None | SRR5074094 | HR-TB | lineage2.2.1.1 | None | ERR245740 | Sensitive | lineage4.1.2 | None | SRR5153236 | MDR-TB | lineage2.2.1 | None | SRR4037619 | Sensitive | lineage4.3.2.1 | None | ERR245764 | HR-TB | lineage3.1.1 | None | ERR245795 | Sensitive | lineage4.3.2.1;lineage3.1.1 | None | ERR245810 | Sensitive | lineage4.9.1 | None | SRR5341460 | Other | lineage3 | None | SAMN03246352 | Pre-XDR-TB | lineage2.2.1 | cn | SAMN02350446 | Sensitive | lineage2.2.1 | None | SRR5341462 | Pre-XDR-TB | lineage3.1.2.1 | None | SRR5341430 | Other | lineage3 | None | ERR4819910 | Other | lineage4.9 | None | ERR2179647 | MDR-TB | lineage4.5 | None | ERR2660495 | Sensitive | lineage1.2.2.2 | None | ERR2653138 | MDR-TB | lineage4.1.2.1 | None | SRR6045537 | Pre-XDR-TB | lineage2.2.1 | None | ERR2660490 | Sensitive | lineage4.3.2.1 | None | ERR2660499 | Sensitive | lineage4.1.1.3 | None | ERR2660498 | Sensitive | lineage4.3.4.2.1 | None | SAMN02350409 | Pre-XDR-TB | lineage2.2.1 | None | SAMN02585942 | Sensitive | lineage4.1.2 | None | SRR6046087 | Other | None | SRR6045843 | Other | lineage4.2.2.2 | None | ERR4829488 | MDR-TB | lineage4.1.2.1 | it | SRR6044925 | Sensitive | lineage4.9 | None | SRR6045957 | Other | lineage4.9 | None | SRR6045002 | MDR-TB | lineage4.9 | None | SRR6046177 | Other | lineage3.1.2 | None | SRR6046189 | Other | lineage4.8 | None | SRR6045289 | Other | None | SRR6046081 | Sensitive | lineage1.1.2 | gb | SRR6046275 | Other | lineage3.1.1 | None | ERR279477 | Sensitive | lineage4.4.1.1.1 | None | ERR2843536 | Other | lineage2.2.1 | None | ERR4829500 | Sensitive | lineage4.1.2.1 | it | ERR4829817 | Sensitive | lineage4.3.3 | it | SRR6982257 | RR-TB | lineage4.1.2.1 | None | ERR4828990 | RR-TB | lineage4.6.2.2 | None | SRR6046752 | Sensitive | lineage4.2.2.2 | None | SRR6397389 | Sensitive | lineage4.1.2.1 | None | SRR6484909 | Sensitive | lineage2.2.1 | None | ERR502471 | Sensitive | lineage5.1.1 | None | ERR502494 | Other | lineage5.1.1 | None | SRR6982099 | Sensitive | lineage4.3.4.2.1 | None | SRR6982115 | Sensitive | lineage4 | None | SRR6982138 | Sensitive | lineage4 | None | SRR6982418 | Sensitive | lineage4.1.1.3 | None | SRR6785281 | Other | lineage4.2.1.1 | None | SRR6982178 | Sensitive | lineage2.2 | None | SRR6153231 | Sensitive | lineage4.4.1.2 | None | ERR502480 | Other | lineage5.1.1 | None | ERR4872322 | Pre-XDR-TB | lineage2.2.1 | None | SRR6982508 | Sensitive | lineage4.9 | None | SRR6982213 | Sensitive | lineage4.3.2.1 | None | SRR6982472 | Sensitive | lineage4.4.1.1 | None | SRR6832659 | Other | lineage4.2.1 | None | SRR6981993 | Other | lineage4.3.2.1 | None | SRR6982349 | Sensitive | lineage2.2.1 | None | SRR6981912 | Sensitive | None | SRR6981962 | Sensitive | None | SRR6982471 | Sensitive | lineage2.2.1 | None | SRR6824550 | Sensitive | lineage4.5 | None | SRR6824603 | Sensitive | lineage4.4.2 | None | SRR6982070 | RR-TB | None | SRR6982053 | Sensitive | lineage4.9;lineage4.3.4.1 | None | ERR502507 | Sensitive | lineage5.1.4 | None | ERR323036 | HR-TB | None | ERR495008 | Sensitive | lineage4.4.1.1.1 | None | ERR5087846 | Other | La1.8.1 | None | SRR7645800 | MDR-TB | lineage2.2.1 | None | ERR5311093 | Other | La1.8.1 | None | ERR5087486 | Other | La1.8.1 | None | ERR5087606 | Other | La1.8.1 | None | ERR5087675 | Other | La1.8.1 | None | ERR5087707 | Other | La1.8.1 | None | ERR5311086 | Sensitive | lineage4.9;La1.8.1 | None | SRR7131296 | Other | lineage4.3.3 | None | SRR7535044 | Pre-XDR-TB | lineage4.6.1.2 | None | ERR5087596 | Other | La1.8.1 | None | ERR5311076 | Other | La1.8.1 | None | ERR5087719 | Other | La1.8.1 | None | ERR5311085 | Other | La1.8.1 | None | ERR5311088 | Other | La1.8.1 | None | SRR6982510 | Sensitive | lineage4;lineage2 | None | SRR8346061 | Pre-XDR-TB | lineage2.2.1 | None | SRR9971080 | RR-TB | lineage2.2.1 | None | ERR323061 | Sensitive | lineage4.9 | None | ERR323048 | Pre-XDR-TB | lineage4.9 | None | SRR9217359 | MDR-TB | lineage1.1.2 | None | ERR038289 | Other | lineage4.3.3 | None | ERR323068 | Sensitive | lineage4.9 | None | ERR036207 | Other | lineage4.9 | None | ERR036233 | Sensitive | lineage4.3.4.1;lineage1.1.2 | None | ERR036242 | Sensitive | lineage4.3.4.2.1 | None | ERR037501 | Sensitive | lineage4.3.4.2.1 | None | ERR1034638 | Pre-XDR-TB | lineage2.2.1 | None | ERR1034687 | Sensitive | lineage3 | None | ERR1034647 | MDR-TB | lineage4.1.1.3 | None | ERR1063847 | Sensitive | lineage3.1.1 | None | ERR1203071 | Sensitive | lineage4.8 | None | ERR1063873 | Sensitive | lineage4.3.4.2.1 | None | ERR1063882 | Sensitive | lineage4.3.4.2 | None | ERR1063890 | Sensitive | lineage3.1.1 | None | ERR10762248 | MDR-TB | lineage4.2.1 | None | ERR10762495 | MDR-TB | lineage2.2.1 | None | ERR1082121 | Sensitive | lineage4.9 | None | ERR1082134 | Sensitive | lineage5.1.1 | None | ERR108424 | Sensitive | lineage4.8 | None | ERR108476 | Sensitive | lineage4.1.2.1 | None | ERR137226 | MDR-TB | lineage2.2.1 | None | ERR1203078 | Sensitive | lineage4.6.2.2 | None | ERR133816 | MDR-TB | lineage2.2.1 | None | ERR323116 | Sensitive | lineage4.3.4.2.1 | None | ERR144568 | Pre-XDR-TB | None | ERR3283046 | MDR-TB | lineage4.9 | None | ERR4024588 | Other | lineage4.1.1 | None | ERR3797007 | Other | La1.8.1 | None | ERR3797013 | Other | La1.8.1 | None | ERR3797043 | HR-TB | None | ERR3439443 | Other | La1.8.1 | None | ERR3439489 | RR-TB | La1.8.1 | None | ERR3994112 | Sensitive | lineage4.1.2.1 | None | ERR405190 | Sensitive | lineage4.9 | None | ERR405209 | Sensitive | lineage4 | None | ERR405191 | Other | lineage4.9 | None | ERR405217 | Sensitive | lineage2.2.1 | None | ERR4187869 | Other | La1.8.1 | None | ERR4187604 | RR-TB | La1.8.1 | None | ERR4187636 | Other | La1.8.1 | None | ERR4187641 | Other | lineage4;La1 | None | ERR4187645 | Other | La1.8.1 | None | ERR4187800 | Other | La1.8.1 | None | ERR4187819 | Other | La1.8 | None | ERR4187921 | Other | None | ERR4187993 | Other | La1.8.1 | None | ERR4187916 | Other | La1.8.1 | None | ERR4188021 | Other | La1.8.1 | None | ERR4187995 | Other | La1.8.1 | None | ERR4188160 | Other | La1.8.1 | None | ERR4188222 | MDR-TB | La1.8.1 | None | ERR4188187 | Other | La1.8.1 | None | ERR4188202 | Other | La1.8.1 | None | ERR4188213 | HR-TB | La1.8.1 | None | ERR4188254 | Other | La1.8.1 | None | ERR4188273 | Other | La1.8.1 | None | ERR4188375 | Sensitive | lineage4.9 | None | ERR4188381 | Other | La1.8.1 | None | ERR4188395 | Other | La1.8.1 | None | ERR4627369 | Other | La1.8.1 | None | ERR4627379 | Other | La1.8.1 | None | ERR473278 | Sensitive | lineage4.9 | None | ERR473303 | Sensitive | lineage4.9 | None | ERR473304 | Sensitive | lineage2.2.1 | None | ERR473341 | Sensitive | lineage4.1.1.3 | None | ERR4769412 | Sensitive | lineage4.9 | None | ERR473367 | Sensitive | lineage4.9 | None | ERR4769467 | Sensitive | lineage4.9 | None | ERR4769428 | Other | La1.3 | None | ERR4769433 | Pre-XDR-TB | lineage4.9 | None | ERR4769462 | Other | La1.3 | None | ERR4769471 | Other | La1.3 | None | ERR4769470 | Sensitive | lineage4.9 | None | ERR4769482 | Sensitive | La1 | None | ERR4769537 | Sensitive | lineage4.9 | None | ERR4769549 | Sensitive | lineage4.9 | None | ERR4772210 | Other | La1.2 | None | ERR4772218 | Other | La1.2 | None | ERR6336794 | Sensitive | lineage1.2.1.2.1 | None | ERR6052085 | Pre-XDR-TB | lineage2.2.2 | None | ERR6052110 | Pre-XDR-TB | lineage2.2.2 | None | ERR5865993 | MDR-TB | lineage2.2.1 | None | ERR5917985 | MDR-TB | lineage2.2.1 | None | ERR6362473 | MDR-TB | lineage2.2.2 | None | ERR736879 | Sensitive | lineage1.1.3.2 | None | ERR6397161 | Other | lineage4.2.2.2 | None | ERR6865691 | Other | lineage4.1.1 | None | ERR6866368 | Sensitive | lineage4.1.2.1 | None | ERR718268 | Sensitive | lineage1.1.1 | None | ERR736808 | Sensitive | lineage2.2.1 | None | ERR736822 | Sensitive | lineage4.4.1.2 | None | ERR702423 | Sensitive | lineage5.1.4 | None | ERR736805 | Sensitive | lineage2.2.1 | None | ERR751339 | Sensitive | lineage5.1.2 | None | ERR751317 | Sensitive | lineage4.9 | None | ERR760877 | MDR-TB | lineage4.1.2.1.1 | None | ERR751729 | Other | lineage1.1.1 | None | ERR7821134 | Sensitive | lineage4.3.2.1 | None | ERR773806 | Sensitive | lineage2.2.1 | None | ERR775800 | Sensitive | lineage1.1 | th | ERR779662 | Sensitive | lineage3.1.1 | None | ERR970449 | RR-TB | lineage4.1.1.3 | None | ERR7821131 | MDR-TB | lineage4.4.1.1.1 | None | ERR9117827 | Other | lineage1.2.2.2 | None | ERR8975044 | Other | lineage4.1.1.2 | None | ERR9786164 | RR-TB | lineage4.1.1.3 | None | SRR10315751 | MDR-TB | lineage4.8 | None | ERR987707 | MDR-TB | lineage4.7 | None | ERR9992879 | XDR-TB | lineage4.3.3 | None | SRR1011450 | Pre-XDR-TB | lineage2.2.1 | None | SRR1011480 | MDR-TB | lineage4.8 | None | SRR1011488 | Other | lineage2.2.1 | None | SRR10272559 | Sensitive | lineage4.4.1.1 | None | ERR987719 | HR-TB | lineage3 | None | SRR10482948 | Other | La1.8.1 | None | SRR1049676 | MDR-TB | lineage4.8;lineage4.3.3 | None | SRR1049677 | MDR-TB | lineage4.8;lineage4.3.3 | None | SRR1062820 | Pre-XDR-TB | lineage2.2.1 | None | SRR1062851 | MDR-TB | lineage4.8 | None | SRR1062859 | Sensitive | lineage2.2.1 | None | SRR1062920 | MDR-TB | lineage4.8;lineage4.3.3 | None | SRR1172717 | Other | lineage4.9 | None | SRR10869143 | Pre-XDR-TB | lineage2.2.1 | None | SRR10993957 | Other | La1.6 | None | SRR11294512 | Other | La1.8.1 | None | SRR1140712 | MDR-TB | lineage4.6.1.2 | None | SRR1167291 | Pre-XDR-TB | lineage2.2.2 | None | SRR10851629 | Sensitive | lineage4.3.3 | None | SRR10869074 | Sensitive | lineage2.2.1.1 | None | SRR10869318 | Sensitive | lineage2.2.1 | None | SRR1140574 | MDR-TB | lineage4.8;lineage4.3.3 | None | SRR1172751 | HR-TB | lineage3.1.2.1 | None | SRR1172807 | Sensitive | lineage4.9 | None | SRR1173185 | HR-TB | lineage4.9 | None | SRR1173450 | RR-TB | lineage4.9 | None | SRR1181136 | Sensitive | lineage2.2 | None | SRR1173781 | Pre-XDR-TB | lineage2.2.2 | None | SRR1175173 | HR-TB | lineage3.1.2.1 | None | SRR1175473 | Other | lineage4.9 | None | SRR1175474 | HR-TB | lineage4.9 | None | SRR1175472 | MDR-TB | lineage4 | None | SRR1175491 | MDR-TB | lineage4 | None | SRR1181085 | Sensitive | lineage4.1.2 | None | SRR1173848 | Pre-XDR-TB | lineage2.2.2 | None | SRR1180237 | Sensitive | lineage4.1.2 | None | SRR1180319 | Sensitive | lineage4.9 | None | SRR1181351 | Sensitive | lineage4.9 | None | SRR1181242 | Sensitive | lineage4.1.2 | None | SRR1181319 | Other | lineage2.2.1 | None | SRR11972438 | HR-TB | lineage1.1.1 | None | SRR1181402 | Sensitive | lineage4.9 | None | SRR1182994 | Sensitive | lineage4.1.2 | None | SRR1196478 | MDR-TB | lineage4.9 | None | SRR11972434 | Sensitive | lineage2.2.1 | None | SRR1184329 | MDR-TB | lineage4.9 | None | SRR11972378 | MDR-TB | lineage1.1.2 | None | SRR11972390 | MDR-TB | lineage2.2.1 | None | SRR11972425 | Pre-XDR-TB | lineage2.2.1 | None | SRR12882699 | Sensitive | lineage1.1.2 | None | SRR12199465 | Sensitive | lineage2.2.1.1 | None | SRR12199468 | Sensitive | lineage4.9;lineage4.4.2 | None | SRR124451 | HR-TB | None | SRR12634609 | MDR-TB | lineage3.1.1 | None | SRR12199461 | Sensitive | lineage1.1.3.1 | None | SRR124452 | HR-TB | lineage2 | None | SRR124453 | HR-TB | None | SRR13199739 | Other | La1.7.1 | None | SRR13199738 | Other | La1.7.1 | None | SRR16278273 | Other | La1.4 | None | SRR13423629 | MDR-TB | lineage2.2.1 | None | SRR14782537 | Pre-XDR-TB | lineage2.2.1 | None | SRR14801294 | MDR-TB | lineage2.2.1 | None | SRR15316595 | RR-TB | lineage4.4.2 | None | SRR13423546 | Other | lineage4.4.2 | None | SRR14782096 | MDR-TB | lineage2.2.1 | None | SRR1573728 | Sensitive | lineage4.4.2 | None | SRR1792247 | Other | La1.7.1 | None | SRR17406750 | Other | lineage1.1.2 | None | SRR19428614 | HR-TB | lineage3.1.1 | None | SRR21469201 | Other | La1.7.1 | None | SRR2100067 | Other | lineage4.3.3 | None | SRR21239778 | Sensitive | lineage4.3.3 | None | SRR21240029 | Sensitive | lineage4.3.3 | None | SRR21469200 | Other | La1.7.1 | None |
|---|
