EBG00000313339 - n.2015C>T
Drug resistance types
4 Sensitive
32 RR-TB
5 HR-TB
34 MDR-TB
15 Pre-XDR-TB
1 XDR-TB
73 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9 | 33 |
| lineage2.2.1 | 36 |
| lineage3 | 4 |
| lineage4.8.1 | 1 |
| lineage4.7 | 1 |
| lineage4.3.4.2.1 | 6 |
| lineage4.8 | 9 |
| lineage2.2.2 | 5 |
| lineage4.3.3 | 5 |
| lineage4.2.1 | 4 |
| lineage4 | 1 |
| lineage4.3.4.2 | 3 |
| lineage4.1.1.1 | 3 |
| lineage4.1.2.1 | 5 |
| lineage4.3.4.1 | 5 |
| lineage2.2.1.1 | 1 |
| lineage4.4 | 1 |
| lineage3;lineage4 | 2 |
| lineage1.2.1.2 | 1 |
| lineage4.4.1.1 | 2 |
| lineage4.4.1.1.1 | 2 |
| lineage4.1.1.3 | 1 |
| lineage4.1.3 | 2 |
| lineage3.1.2.1 | 3 |
| La1.6 | 1 |
| lineage4.2.1.1;lineage4.3.3 | 1 |
| lineage1.2.1.1 | 1 |
| lineage2.2.1;lineage4 | 1 |
| lineage4.1.1.3.1 | 1 |
| lineage4.2.2.2 | 2 |
| lineage4.1.2 | 2 |
| lineage3.1.1;lineage4.9 | 1 |
| lineage1.1.1.1 | 1 |
| lineage4.1.1.2 | 1 |
| lineage4.6.1.1 | 1 |
| La1.4 | 1 |
| La1.2 | 1 |
| lineage3.1.1 | 1 |
| lineage4.4.2 | 1 |
| lineage4.1.1.3.1;lineage4.9 | 1 |
| lineage2.2;lineage4 | 1 |
| lineage1.1.3.3 | 1 |
| lineage4.3.2 | 1 |
| lineage3.1.2.1;lineage4.9 | 1 |
| lineage4.1.2.1;lineage4.9 | 1 |
| lineage4.3.2.1 | 1 |
| lineage4.1;lineage4.9 | 1 |
| lineage1.1.3.1 | 1 |
| lineage4.1.2.1;lineage4.4.1.1 | 1 |
| lineage4.1.2.1;lineage4.4.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 164 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR10796591 | Other | lineage4.9 | None | SRR18002947 | MDR-TB | lineage2.2.1 | None | SRR1140716 | Other | lineage3 | None | SRR11342662 | MDR-TB | lineage4.8.1 | None | SRR7645928 | Other | lineage4.7 | None | ERR10796560 | Other | lineage4.9 | None | SRR1049560 | MDR-TB | lineage4.3.4.2.1 | None | SRR18002874 | MDR-TB | lineage2.2.1 | None | SRR7131149 | Pre-XDR-TB | lineage4.8 | None | SRR18003004 | Pre-XDR-TB | lineage2.2.2 | None | SRR11342649 | MDR-TB | lineage4.3.3 | None | SRR18003042 | Other | lineage2.2.1 | None | ERR867524 | Pre-XDR-TB | lineage4.2.1 | None | ERR502474 | RR-TB | lineage4.9 | None | SRR3675265 | Other | lineage4 | None | SRR1140753 | RR-TB | lineage4.3.4.2.1 | None | ERR10796571 | Other | lineage4.9 | None | ERR10796589 | Other | lineage4.9 | None | ERR10796633 | Other | lineage4.3.4.2 | None | ERR867569 | Other | lineage4.9 | None | SRR11342642 | MDR-TB | lineage4.1.1.1 | None | ERR2027257 | Other | lineage4.1.2.1 | None | ERR10796618 | Other | lineage4.3.4.1 | None | SRR10315579 | Other | lineage2.2.1.1 | None | ERR867567 | RR-TB | lineage3 | None | SRR16627752 | RR-TB | lineage4.4 | None | ERR4769433 | RR-TB | lineage4.9 | None | SRR3675230 | Other | lineage3;lineage4 | None | SRR11342660 | MDR-TB | lineage2.2.1 | None | ERR867554 | Other | lineage4.3.4.1 | None | ERR502479 | RR-TB | lineage4.9 | None | ERR502478 | RR-TB | lineage4.9 | None | SRR18003047 | MDR-TB | lineage2.2.1 | None | SRR18002945 | Other | lineage2.2.1 | None | ERR867572 | Other | lineage4.9 | None | ERR4820030 | Other | lineage4.9 | None | SRR18003012 | Pre-XDR-TB | lineage2.2.1 | None | SRR20969475 | Other | lineage1.2.1.2 | None | SRR11342698 | RR-TB | lineage4.4.1.1 | None | ERR3797062 | RR-TB | lineage4.9 | None | ERR867522 | Pre-XDR-TB | lineage2.2.1 | None | DRR185024 | Other | lineage2.2.2 | None | SRR11342696 | MDR-TB | lineage4.4.1.1.1 | None | ERR987695 | HR-TB | lineage4.3.4.2 | None | SRR16156697 | RR-TB | lineage2.2.1 | None | SRR18003032 | Other | lineage2.2.1 | None | SRR11342647 | MDR-TB | lineage4.1.1.3 | None | ERR502470 | RR-TB | lineage4.9 | None | ERR867571 | Other | lineage4.9 | None | SRR1173450 | Other | lineage4.9 | None | ERR5917985 | MDR-TB | lineage2.2.1 | None | SRR1173281 | Other | lineage3 | None | SRR11342671 | RR-TB | lineage4.1.3 | None | SRR11342673 | RR-TB | lineage4.3.4.2 | None | SRR7070195 | Sensitive | lineage3.1.2.1 | None | SRR15508556 | Other | lineage4.3.4.1 | None | ERR4818904 | Other | lineage4.8 | None | SRR1173170 | Other | lineage4.9 | None | SRR1175472 | RR-TB | lineage4.3.4.1 | None | SRR7645906 | Other | lineage2.2.1 | None | SRR7755657 | Other | lineage4.8 | None | SRR5007204 | Other | lineage4.1.2.1 | None | SRR10315464 | MDR-TB | lineage4.4.1.1 | None | SRR10993951 | RR-TB | La1.6 | None | ERR867542 | HR-TB | lineage4.2.1.1;lineage4.3.3 | None | ERR2027209 | MDR-TB | lineage1.2.1.1 | None | ERR867527 | Pre-XDR-TB | lineage2.2.1 | None | ERR867568 | Other | lineage2.2.1;lineage4 | None | SRR11342640 | MDR-TB | lineage4.3.3 | None | SRR18002941 | RR-TB | lineage2.2.1 | None | ERR4769554 | RR-TB | lineage4.9 | None | SRR11342669 | Other | lineage4.8 | None | ERR4815022 | Other | lineage3.1.2.1 | None | SRR5007167 | RR-TB | lineage4.1.1.3.1 | None | SRR7755655 | Other | lineage4.1.2.1 | None | SRR11972425 | Pre-XDR-TB | lineage2.2.1 | None | SRR11342687 | RR-TB | lineage4.2.2.2 | None | ERR867538 | Other | lineage4.2.2.2 | None | ERR10796620 | Other | lineage4.1.1.1 | None | SRR11342682 | Other | lineage4.1.2 | None | SRR7755645 | Pre-XDR-TB | lineage2.2.1 | None | SRR18002984 | MDR-TB | lineage2.2.2 | None | SRR11342686 | MDR-TB | lineage4.8 | None | SRR11342651 | MDR-TB | lineage4.1.1.1 | None | SRR7645901 | MDR-TB | lineage2.2.1 | None | ERR867523 | Pre-XDR-TB | lineage2.2.1 | None | DRR184629 | Other | lineage2.2.1 | None | ERR171142 | Other | lineage3.1.1;lineage4.9 | None | SRR18002881 | Pre-XDR-TB | lineage2.2.1 | None | SRR18003049 | Other | lineage2.2.1 | None | SAMN02380982 | MDR-TB | lineage4.3.4.2.1 | None | SRR18002875 | MDR-TB | lineage2.2.2 | None | SRR1184329 | Other | lineage4.9 | None | ERR752012 | HR-TB | lineage1.1.1.1 | None | ERR8975044 | Other | lineage4.1.1.2 | None | SAMN02567682 | Other | lineage4.6.1.1 | ug | SRR16278274 | Other | La1.4 | None | ERR9992879 | XDR-TB | lineage4.3.3 | None | ERR10796598 | Other | lineage4.9 | None | SRR7131195 | Other | lineage2.2.1 | None | ERR867525 | Pre-XDR-TB | lineage2.2.1 | None | SRR11342664 | MDR-TB | lineage2.2.2 | None | SRR7645971 | Other | lineage2.2.1 | None | SRR1049559 | MDR-TB | lineage4.3.4.2.1 | None | ERR4769418 | Other | La1.2 | None | SRR12634609 | MDR-TB | lineage3.1.1 | None | ERR867570 | RR-TB | lineage4.9 | None | SRR12062493 | Pre-XDR-TB | lineage4.4.2 | None | SRR18003030 | Pre-XDR-TB | lineage2.2.1 | None | SRR5007161 | RR-TB | lineage4.1.1.3.1;lineage4.9 | None | SRR18002891 | MDR-TB | lineage2.2.1 | None | SRR11342658 | RR-TB | lineage4.1.2 | None | SRR9971041 | MDR-TB | lineage4.3.3 | None | SRR10315556 | Sensitive | lineage2.2.1 | None | SRR19303820 | RR-TB | lineage4.8 | None | ERR502481 | RR-TB | lineage4.9 | None | SRR21727760 | Other | lineage2.2.1 | None | SRR7069800 | Other | lineage3.1.2.1 | None | SRR7131123 | Other | lineage4.8 | None | ERR4821172 | RR-TB | lineage4.9 | None | SRR7645899 | Other | lineage2.2.1 | None | SRR3618864 | Pre-XDR-TB | lineage2.2.1 | None | SRR16156832 | RR-TB | lineage2.2;lineage4 | None | SRR5818647 | Other | lineage4.3.4.2.1 | None | ERR4798769 | Other | lineage1.1.3.3 | None | ERR4972567 | MDR-TB | lineage4.3.2 | None | SRR3675582 | Other | lineage4.9 | None | ERR4816198 | Sensitive | lineage4.1.3 | None | ERR502473 | RR-TB | lineage4.9 | None | ERR2027290 | Other | lineage3.1.2.1;lineage4.9 | None | SRR18003046 | MDR-TB | lineage2.2.1 | None | SRR18002967 | HR-TB | lineage2.2.1 | None | SRR3675509 | Other | lineage4.9 | None | ERR867541 | MDR-TB | lineage4.2.1 | None | ERR736816 | Other | lineage4.9 | None | SRR19303815 | Other | lineage4.8 | None | ERR4813263 | MDR-TB | lineage4.8 | None | SRR3619841 | Pre-XDR-TB | lineage2.2.1 | None | SRR11342644 | MDR-TB | lineage4.4.1.1.1 | None | SRR1173740 | Other | lineage3;lineage4 | None | ERR10796578 | Other | lineage2.2.1 | None | SRR1062928 | Other | lineage4.1.2.1;lineage4.9 | None | ERR4819383 | RR-TB | lineage4.9 | None | SRR1173185 | Other | lineage4.9 | None | SRR7645972 | MDR-TB | lineage4.2.1 | None | SRR1062871 | RR-TB | lineage4.3.4.2.1 | None | SRR1196478 | Other | lineage4.9 | None | ERR867573 | Other | lineage4.9 | None | ERR3283006 | RR-TB | lineage4.9 | None | SRR9971168 | Other | lineage4.3.2.1 | None | ERR4819863 | RR-TB | lineage4.9 | None | ERR10796636 | Other | lineage4.1.2.1 | None | SRR1173770 | Other | lineage4.9 | None | SRR11342646 | HR-TB | lineage3 | None | SRR18003024 | RR-TB | lineage2.2.1 | None | SRR1175491 | MDR-TB | lineage4.3.4.1 | None | SRR7755649 | MDR-TB | lineage4.2.1 | None | ERR10796629 | Other | lineage4.1;lineage4.9 | None | SRR18003002 | MDR-TB | lineage2.2.1 | None | SRR6650335 | Sensitive | lineage1.1.3.1 | None | ERR10796597 | Other | lineage4.3.3 | None | SRR1049726 | Other | lineage4.1.2.1;lineage4.4.1.1 | None | SRR1049725 | Other | lineage4.1.2.1;lineage4.4.1 | None | SRR1140736 | Other | lineage4.1.2.1 | None |
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