Rv3596c - c.741C>G
Drug resistance types
106 Sensitive
6 RR-TB
6 HR-TB
13 MDR-TB
8 Pre-XDR-TB
0 XDR-TB
36 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage2.2.1;lineage4 | 2 |
| lineage2.2.1 | 15 |
| lineage4.1.1.1 | 2 |
| lineage4.9 | 106 |
| lineage2.2.2 | 3 |
| lineage4.1.2.1 | 6 |
| lineage3 | 3 |
| M.canetti;lineage4.9 | 1 |
| lineage4.3.2.1 | 1 |
| lineage5.1.2 | 1 |
| La3;lineage2.1;lineage4.9;lineage6.3 | 1 |
| lineage4.1.1.3;lineage4.9 | 2 |
| lineage4.4.2 | 1 |
| lineage1;lineage4.9 | 1 |
| lineage4.2.1 | 2 |
| lineage1.1.1 | 2 |
| lineage4.2.1.1;lineage4.3.3 | 1 |
| lineage2;lineage4.9 | 1 |
| lineage4.1;lineage4.9 | 2 |
| lineage4.4.1.1 | 1 |
| lineage4.3.3 | 1 |
| lineage4 | 5 |
| lineage1.1.2;lineage4.1.2.1;lineage4.1.3 | 1 |
| lineage1.1.1;lineage4 | 1 |
| lineage4.4.1.1.1 | 1 |
| lineage2.2.1;lineage4.9 | 2 |
| lineage3.1.2 | 1 |
| lineage2;lineage4 | 1 |
| 1 | |
| lineage3;lineage4.9 | 1 |
| lineage5.1.4 | 1 |
| lineage4.3.4.2 | 1 |
| La1.8.1 | 1 |
| lineage4.5 | 1 |
| lineage4.3.4.2.1 | 1 |
| lineage4.8 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 175 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR1181237 | Sensitive | lineage2.2.1;lineage4 | None | SRR12708415 | HR-TB | lineage2.2.1 | None | SRR11342642 | MDR-TB | lineage4.1.1.1 | None | ERR363479 | Sensitive | lineage4.9 | None | SRR18002984 | MDR-TB | lineage2.2.2 | None | SRR11662694 | Other | lineage4.9 | None | ERR363449 | Sensitive | lineage4.9 | None | ERR6865513 | Other | lineage4.1.2.1 | None | ERR400326 | Other | lineage4.9 | None | ERR2514552 | Sensitive | lineage3 | None | ERR4814639 | HR-TB | lineage4.9 | None | SRR5341323 | Sensitive | lineage4.9 | None | SRR6045371 | Other | lineage4.9 | None | SRR1183054 | Sensitive | lineage4.9 | None | ERR363499 | Sensitive | lineage4.9 | None | SRR6046564 | Sensitive | lineage4.9 | None | ERR369160 | Sensitive | lineage4.9 | None | ERR363445 | Other | lineage4.9 | None | ERR363502 | Other | lineage4.9 | None | SRR5341437 | Sensitive | lineage4.9 | None | SRR3675247 | Other | lineage4.9 | None | SRR3675449 | Other | M.canetti;lineage4.9 | None | SRR6045050 | Sensitive | lineage4.3.2.1 | None | SRR1175512 | Sensitive | lineage4.9 | None | SRR1180399 | Sensitive | lineage4.9 | None | SRR6045706 | Sensitive | lineage4.9 | None | SRR6044819 | Sensitive | lineage4.9 | None | ERR373947 | Other | lineage4.9 | None | ERR400538 | RR-TB | lineage5.1.2 | None | SRR3675517 | Other | La3;lineage2.1;lineage4.9;lineage6.3 | None | SRR1181351 | Sensitive | lineage4.9 | None | ERR363456 | Sensitive | lineage4.9 | None | SRR28351444 | MDR-TB | lineage3 | None | SRR1175500 | Sensitive | lineage4.1.1.3;lineage4.9 | None | SRR1175507 | Sensitive | lineage4.1.1.3;lineage4.9 | None | ERR867570 | RR-TB | lineage4.9 | None | SRR12062493 | Pre-XDR-TB | lineage4.4.2 | None | SRR18003030 | Pre-XDR-TB | lineage2.2.1 | None | ERR4797350 | Sensitive | lineage1;lineage4.9 | None | ERR2512770 | Sensitive | lineage4.2.1 | None | ERR4819314 | Other | lineage1.1.1 | None | SRR1180250 | Other | lineage4.9 | None | SRR18002874 | MDR-TB | lineage2.2.1 | None | SRR1180406 | Sensitive | lineage4.9 | None | ERR369162 | Other | lineage4.9 | None | SRR5007204 | Other | lineage4.1.2.1 | None | ERR4816113 | Sensitive | lineage4.1.1.1 | None | ERR363453 | Sensitive | lineage4.9 | None | ERR4817998 | Other | lineage3 | None | ERR867542 | HR-TB | lineage4.2.1.1;lineage4.3.3 | None | SRR18003004 | Pre-XDR-TB | lineage2.2.2 | None | SRR18002891 | MDR-TB | lineage2.2.1 | None | SRR1172807 | Sensitive | lineage4.9 | None | ERR369151 | Other | lineage4.9 | None | ERR363498 | Sensitive | lineage4.9 | None | SRR1180391 | Sensitive | lineage4.9 | None | ERR502943 | Sensitive | lineage2.2.1;lineage4 | None | SRR1180946 | Sensitive | lineage2;lineage4.9 | None | SRR12708384 | Sensitive | lineage4.9 | None | SRR5341296 | Sensitive | lineage4.9 | None | SRR9613550 | HR-TB | lineage4.1.2.1 | None | SRR3618864 | Pre-XDR-TB | lineage2.2.1 | None | ERR363506 | Sensitive | lineage4.9 | None | ERR349300 | Sensitive | lineage4.9 | None | ERR363421 | Sensitive | lineage4.9 | None | ERR369161 | Sensitive | lineage4.9 | None | SRR3675473 | Sensitive | lineage4.9 | None | SRR3675514 | Sensitive | lineage4.9 | None | SRR1175487 | Sensitive | lineage4.9 | None | SRR12708374 | Sensitive | lineage4.1;lineage4.9 | None | SRR12708398 | Sensitive | lineage4.4.1.1 | None | SRR1180420 | Sensitive | lineage4.9 | None | SRR6046897 | Sensitive | lineage4.9 | None | ERR363474 | Sensitive | lineage4.9 | None | SRR1181283 | Sensitive | lineage4.9 | None | SRR1175508 | Sensitive | lineage4.9 | None | SRR11349186 | MDR-TB | lineage4.3.3 | None | SRR18003046 | MDR-TB | lineage2.2.1 | None | SRR1180319 | Sensitive | lineage4.9 | None | ERR363509 | Sensitive | lineage4.9 | None | SRR1180977 | Sensitive | lineage4.9 | None | ERR4816904 | Sensitive | lineage4.1.2.1 | None | SRR1181349 | Sensitive | lineage4 | None | SRR3675541 | Sensitive | lineage4.9 | None | ERR4769493 | Other | lineage4.9 | None | ERR4812155 | Other | lineage4.9 | None | SRR3675229 | Sensitive | lineage4.9 | None | ERR4816100 | Sensitive | lineage1.1.2;lineage4.1.2.1;lineage4.1.3 | None | ERR363447 | Other | lineage4.9 | None | ERR502470 | RR-TB | lineage4.9 | None | SRR1180413 | Sensitive | lineage4.9 | None | ERR349266 | Sensitive | lineage4.9 | None | SRR18002998 | Pre-XDR-TB | lineage2.2.2 | None | ERR4831638 | Sensitive | lineage1.1.1;lineage4 | None | ERR349296 | Sensitive | lineage4.9 | None | SRR1181402 | Sensitive | lineage4.9 | None | ERR369159 | Sensitive | lineage4.9 | None | ERR349264 | Sensitive | lineage4.9 | None | ERR369156 | Sensitive | lineage4.9 | None | SRR18003024 | RR-TB | lineage2.2.1 | None | ERR349330 | Sensitive | lineage4.9 | None | ERR363446 | Sensitive | lineage4.9 | None | SRR1180312 | Sensitive | lineage4.9 | None | SRR6045503 | Sensitive | lineage4.9 | None | SRR1180410 | Sensitive | lineage4.9 | None | SRR1181325 | Sensitive | lineage4.9 | None | ERR4811030 | Sensitive | lineage4.9 | None | SRR6046611 | Sensitive | lineage4.9 | None | ERR4798431 | Sensitive | lineage4.1;lineage4.9 | None | SRR1181215 | Sensitive | lineage4.4.1.1.1 | None | SRR3675522 | Other | lineage4.9 | None | SRR1180444 | Sensitive | lineage4.9 | None | SRR1172717 | Sensitive | lineage4.9 | None | SRR3675292 | Sensitive | lineage4.9 | None | SRR1184114 | Sensitive | lineage2.2.1;lineage4.9 | None | ERR363490 | Sensitive | lineage4.9 | None | SRR3675455 | Sensitive | lineage4.9 | None | ERR4799547 | HR-TB | lineage2.2.1 | None | SRR1184021 | Sensitive | lineage4.9 | None | SRR5341345 | Sensitive | lineage4.9 | None | ERR349265 | Other | lineage4.9 | None | ERR373945 | Sensitive | lineage4.9 | None | ERR363426 | Sensitive | lineage4.9 | None | ERR6865502 | Sensitive | lineage4 | None | ERR4178226 | Sensitive | lineage4 | None | SRR3675209 | Sensitive | lineage4.9 | None | ERR349299 | Other | lineage4.9 | None | SRR6046245 | Other | lineage4.9 | None | SRR3675318 | Other | lineage4.9 | None | SRR20970043 | MDR-TB | lineage2.2.1 | None | ERR400336 | Sensitive | lineage4.9 | None | SRR3675260 | Sensitive | lineage4.9 | None | ERR867541 | MDR-TB | lineage4.2.1 | None | SRR12708372 | Sensitive | lineage4.9 | None | SRR18002881 | Pre-XDR-TB | lineage2.2.1 | None | SRR3675387 | Other | lineage4.9 | None | ERR4817554 | Other | lineage1.1.1 | None | SRR21677886 | Sensitive | lineage4.9 | None | SRR3619841 | Pre-XDR-TB | lineage2.2.1 | None | ERR3797065 | RR-TB | lineage4.9 | None | ERR13266892 | MDR-TB | lineage3.1.2 | None | ERR369157 | Sensitive | lineage4.9 | None | ERR373946 | Sensitive | lineage4.9 | None | SRR1173185 | Other | lineage4.9 | None | ERR1023502 | MDR-TB | lineage2;lineage4 | None | SRR1181390 | Sensitive | lineage2.2.1;lineage4.9 | None | SRR12708416 | Sensitive | None | SRR1196478 | Other | lineage4.9 | None | SRR5341396 | Other | lineage3;lineage4.9 | None | SRR2010299 | MDR-TB | lineage2.2.1 | None | ERR2513283 | Sensitive | lineage5.1.4 | None | ERR2517475 | Other | lineage4 | None | ERR4797313 | Sensitive | lineage2.2.1 | None | SRR11342673 | RR-TB | lineage4.3.4.2 | None | SRR1180355 | Sensitive | lineage4.9 | None | SRR11462861 | Other | La1.8.1 | None | SRR3675477 | Sensitive | lineage4.9 | None | SRR1175513 | Sensitive | lineage4.9 | None | ERR363500 | Sensitive | lineage4.9 | None | SRR1175506 | Sensitive | lineage4.9 | None | ERR4811031 | Sensitive | lineage4.5 | None | SRR1180345 | Other | lineage4.9 | None | SRR1175496 | Sensitive | lineage4.9 | None | ERR369163 | Sensitive | lineage4.9 | None | SRR12708399 | MDR-TB | lineage4.3.4.2.1 | None | ERR369158 | Other | lineage4.9 | None | SRR1180375 | Sensitive | lineage4.9 | None | SRR1180300 | Sensitive | lineage4.9 | None | ERR400320 | Sensitive | lineage4.9 | None | SRR3675265 | Other | lineage4 | None | SRR18002974 | Other | lineage2.2.1 | None | SRR11972425 | Pre-XDR-TB | lineage2.2.1 | None | ERR4817667 | HR-TB | lineage4.8 | None | ERR4821686 | Sensitive | lineage4.1.2.1 | None | ERR4178309 | Other | lineage4.1.2.1 | None |
|---|
