EBG00000313325 - n.615T>C


Drug resistance types
35 Sensitive 28 RR-TB 23 HR-TB 16 MDR-TB 7 Pre-XDR-TB 1 XDR-TB 32 Other
lineage Counts
lineage Count
lineage4.1.1.3 1
lineage4.9 45
lineage4.8 35
lineage2.2.1 16
lineage4.1.2 1
lineage4.8.1 1
lineage4.9;lineage9 2
lineage4 3
lineage4.3.4.1 2
lineage2.1;lineage4.1.4;lineage4.9 1
lineage2.2.1;lineage4.5 1
M.canetti;lineage4.2;lineage4.9 1
lineage4.2;lineage4.9 1
lineage2.2.1.1 1
La1.7;M.canetti;lineage4.9 1
lineage6.1.3 1
lineage1.1.1 1
La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 1
lineage2.2.1;lineage4 1
lineage3.1.2.2 1
lineage4.3.2.1 1
lineage4.9;lineage6.3 1
lineage4.3.2;lineage4.9 1
La2;lineage4.9 1
lineage1.1.1.1 1
lineage2.2.1;lineage4.9 1
lineage2.2.2 1
lineage4.4.1.1.1 2
lineage6.1.1 2
lineage4.6.3;lineage4.9 1
lineage4.1.2.1 1
lineage6.1.2 1
lineage3.1.2.1;lineage3.1.2.2 1
La1.7;lineage3.1;lineage4 1
La1.8.1 1
M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 1
La2 1
La2;lineage4.9;lineage9 1
lineage4.3.4.2.1 2
lineage4.4.1.2 1
lineage4.1.2;lineage4.9 1
lineage3 1
spoligotype Counts
spoligotype Count
None 142
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR6982239 Sensitive lineage4.1.1.3 None
ERR4820773 HR-TB lineage4.9 None
ERR4817667 HR-TB lineage4.8 None
SRR26937107 MDR-TB lineage2.2.1 None
ERR867575 Other lineage4.9 None
SRR1180226 HR-TB lineage4.9 None
SRR11342682 Other lineage4.1.2 None
SRR9971150 RR-TB lineage4.8.1 None
ERR978735 Other lineage4.8 None
SRR1174897 MDR-TB lineage4.9;lineage9 None
ERR978748 Other lineage4.8 None
ERR978755_ERR978756_ERR978754_ERR978757 RR-TB lineage4.8 None
ERR2229198 Sensitive lineage4.8 None
ERR4798823 HR-TB lineage4 None
ERR11465353 Sensitive lineage4.3.4.1 None
SRR6045219 HR-TB lineage4.9 None
SRR22424787 Sensitive lineage4.9 None
SRR10315567 HR-TB lineage2.2.1 None
ERR3797036 HR-TB lineage2.1;lineage4.1.4;lineage4.9 None
ERR4811035 Pre-XDR-TB lineage2.2.1;lineage4.5 None
SRR3675571 MDR-TB M.canetti;lineage4.2;lineage4.9 None
SRR1181325 Sensitive lineage4.9 None
SRR1180355 Sensitive lineage4.9 None
SRR1180319 Sensitive lineage4.9 None
SRR1180977 Sensitive lineage4.9 None
SRR1175513 Sensitive lineage4.9 None
DRR184982 Other lineage2.2.1 None
ERR4816478 HR-TB lineage4 None
SRR9971112 HR-TB lineage2.2.1 None
ERR978752 Other lineage4.8 None
SRR1180399 Sensitive lineage4.9 None
ERR911929 Other lineage4.8 None
ERR4828872 RR-TB lineage4.2;lineage4.9 None
ERR978734 RR-TB lineage4.8 None
ERR11465352 Sensitive lineage4.3.4.1 None
ERR978726_ERR978727 RR-TB lineage4.8 None
DRR034348 Other lineage2.2.1 None
SRR1180172 RR-TB lineage2.2.1 None
SRR1183106 RR-TB lineage2.2.1.1 None
ERR4819241 Other lineage4.9 None
SRR1175506 Sensitive lineage4.9 None
SRR1180410 Sensitive lineage4.9 None
ERR108125 RR-TB lineage4.9 None
SAMEA3501065 RR-TB lineage4.8 None
SRR1180406 Sensitive lineage4.9 None
ERR6359074 HR-TB lineage4.9 None
SRR9971114 Other lineage2.2.1 None
ERR736835 HR-TB La1.7;M.canetti;lineage4.9 None
ERR978746_ERR978747_ERR978748 RR-TB lineage4.8 None
ERR978756 Other lineage4.8 None
ERR9787336 RR-TB lineage6.1.3 None
SRR1180420 Sensitive lineage4.9 None
ERR978694_ERR978693 Other lineage4.8 None
SAMEA3501015 Other lineage4.8 None
SRR1172310 MDR-TB lineage4.9 None
ERR4819314 HR-TB lineage1.1.1 None
SRR6046644 MDR-TB La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 None
ERR978761_ERR978762_ERR978760 RR-TB lineage4.8 None
ERR4769439 HR-TB lineage4.9 None
ERR978750_ERR978752_ERR978751 RR-TB lineage4.8 None
SRR1181237 Sensitive lineage2.2.1;lineage4 None
SRR1181349 Sensitive lineage4 None
ERR4798648 MDR-TB lineage3.1.2.2 None
ERR911930 Other lineage4.8 None
SRR9970981 RR-TB lineage4.3.2.1 None
SAMEA3450033 Other lineage4.8 None
ERR502524 MDR-TB lineage4.9;lineage6.3 None
ERR736865 MDR-TB lineage4.3.2;lineage4.9 None
ERR978751 Other lineage4.8 None
SAMEA3501063 RR-TB lineage4.8 None
ERR4769474 HR-TB lineage4.9 None
ERR323039 MDR-TB La2;lineage4.9 None
ERR4817731 HR-TB lineage4.9 None
ERR6358951 Sensitive lineage4.9 None
SAMEA3501067 RR-TB lineage4.8 None
SRR1180444 Sensitive lineage4.9 None
DRR185000 Other lineage1.1.1.1 None
SRR1175512 Sensitive lineage4.9 None
SRR1180391 Sensitive lineage4.9 None
SRR1180413 Sensitive lineage4.9 None
SRR1181390 Sensitive lineage2.2.1;lineage4.9 None
ERR4819422 HR-TB lineage4.9 None
SRR1183144 RR-TB lineage2.2.1 None
ERR9992784 XDR-TB lineage2.2.2 None
ERR4769442 Sensitive lineage4.9 None
SAMEA3501046 RR-TB lineage4.8 None
SRR6045359 HR-TB lineage4.9 None
ERR978755 RR-TB lineage4.8 None
ERR911929_ERR911930 Other lineage4.8 None
SRR1181215 Sensitive lineage4.4.1.1.1 None
SRR1180375 Sensitive lineage4.9 None
ERR9787014 RR-TB lineage6.1.1 None
ERR978747 Other lineage4.8 None
SRR11972425 Pre-XDR-TB lineage2.2.1 None
SRR6045832 Other lineage4.9 None
SRR26936983 MDR-TB lineage2.2.1 None
SRR6046141 Other lineage4.9 None
SRR26159047 RR-TB lineage4.6.3;lineage4.9 None
ERR6866125 Sensitive lineage4.1.2.1 None
ERR978757 RR-TB lineage4.8 None
ERR9787033 Sensitive lineage6.1.2 None
SRR3601585 Pre-XDR-TB lineage2.2.1 None
SRR6045555 Other lineage4.9 None
SRR1175487 Sensitive lineage4.9 None
ERR987729 MDR-TB lineage3.1.2.1;lineage3.1.2.2 None
ERR978762 Other lineage4.8 None
SRR10315751 MDR-TB lineage4.8 None
ERR405219 HR-TB La1.7;lineage3.1;lineage4 None
SRR1180312 Sensitive lineage4.9 None
ERR3799304 RR-TB lineage6.1.1 None
SRR7236374 Other La1.8.1 None
SRR6046397 RR-TB M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 None
ERR978727 Other lineage4.8 None
SRR1181283 Sensitive lineage4.9 None
SRR13888750 Other La2 None
SRR5341470 MDR-TB lineage4.9;lineage9 None
ERR867572 Other lineage4.9 None
SRR11972417 MDR-TB lineage2.2.1 None
ERR323053 MDR-TB La2;lineage4.9;lineage9 None
SRR1183054 Sensitive lineage4.9 None
ERR4819877 HR-TB lineage4.9 None
SRR1183111 HR-TB lineage4.9 None
SRR3618864 Pre-XDR-TB lineage2.2.1 None
ERR4769444 HR-TB lineage4.9 None
ERR4816656 Other lineage4.9 None
SRR3619841 Pre-XDR-TB lineage2.2.1 None
ERR978734_ERR978733_ERR978735 RR-TB lineage4.8 None
ERR11465511 Other lineage4.3.4.2.1 None
ERR323056 HR-TB lineage4.4.1.2 None
SAMEA3501070 RR-TB lineage4.8 None
ERR978761 Other lineage4.8 None
ERR4800527 MDR-TB lineage2.2.1 None
SAMEA3501052 RR-TB lineage4.8 None
ERR11465510 Sensitive lineage4.3.4.2.1 None
SRR22424765 HR-TB lineage4.8 None
SRR1180300 Sensitive lineage4.9 None
ERR978694 Other lineage4.8 None
SRR11349145 Pre-XDR-TB lineage4.4.1.1.1 None
SRR6982246 RR-TB lineage4.1.2;lineage4.9 None
SRR3619764 Pre-XDR-TB lineage2.2.1 None
ERR9786076 Other lineage3 None
SRR16156804 Sensitive lineage4.9 None