EBG00000313339 - n.2389G>T
Drug resistance types
109 Sensitive
24 RR-TB
57 HR-TB
25 MDR-TB
10 Pre-XDR-TB
1 XDR-TB
111 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage6 | 2 |
| lineage6.1.3 | 2 |
| lineage2.2.1 | 26 |
| lineage4.8 | 15 |
| lineage4.9 | 84 |
| lineage4.4.1.1.1 | 3 |
| La1.8.1 | 5 |
| lineage4 | 59 |
| lineage4.9;lineage2.2 | 1 |
| lineage4.1.2.1 | 8 |
| lineage2.2 | 3 |
| lineage1.1 | 1 |
| lineage3 | 15 |
| lineage2 | 1 |
| La2 | 1 |
| lineage4.4 | 1 |
| lineage2.2.1.1 | 3 |
| lineage2.2.2 | 1 |
| lineage1.2.1.2 | 1 |
| lineage4.1.1 | 2 |
| lineage3.1.3 | 3 |
| lineage4.3.4.2 | 2 |
| 35 | |
| lineage4.3.4 | 2 |
| lineage2.1 | 3 |
| lineage3.1.2.1 | 2 |
| lineage1.2.1.1 | 1 |
| lineage1.1.2 | 4 |
| lineage4.5 | 3 |
| lineage4.3.3 | 5 |
| lineage4.3.2.1 | 3 |
| lineage4;lineage2 | 1 |
| lineage4.1.1.3 | 1 |
| lineage1.1.1 | 3 |
| lineage4.4.1.1 | 5 |
| lineage4.1.2 | 2 |
| lineage4.6.2.2 | 2 |
| lineage3.1.1 | 1 |
| lineage4.6.1.2 | 1 |
| lineage4.2.1 | 2 |
| lineage5.2 | 1 |
| lineage3.1.2.2 | 1 |
| lineage4.3.4.2.1 | 1 |
| lineage4.5;lineage2.2 | 1 |
| lineage4.8.1 | 1 |
| lineage4.4.1.2 | 1 |
| lineage4.2.2 | 1 |
| La1 | 1 |
| La1.7.X-unk4 | 1 |
| lineage4;lineage3.1 | 1 |
| La1.3 | 7 |
| lineage4.9;La1.3 | 3 |
| La1.2 | 1 |
| lineage1.1.3.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 337 |
Geographic prevalence
Country level data for this variant is available for 27 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR9787030 | Sensitive | lineage6 | None | ERR9787256 | Other | lineage6.1.3 | None | ERR9787362 | Sensitive | lineage6 | None | SRR10315567 | Other | lineage2.2.1 | None | SRR10315751 | MDR-TB | lineage4.8 | None | SRR10397241 | HR-TB | lineage2.2.1 | None | SRR1172717 | Other | lineage4.9 | None | SRR11349145 | Pre-XDR-TB | lineage4.4.1.1.1 | None | SRR11462861 | Other | La1.8.1 | None | SRR1158918 | Sensitive | lineage4 | None | SRR1172807 | Sensitive | lineage4.9 | None | SRR1173515 | HR-TB | lineage4.9 | None | SRR1173777 | Other | lineage4 | None | SRR1173568 | Other | lineage4.9 | None | SRR1175500 | MDR-TB | lineage4 | None | SRR1175487 | Sensitive | lineage4.9 | None | SRR1175506 | Sensitive | lineage4.9 | None | SRR1175512 | Sensitive | lineage4.9 | None | SRR1175507 | MDR-TB | lineage4 | None | SRR1175508 | Other | lineage4.9 | None | SRR1175513 | Other | lineage4.9 | None | SRR1180319 | Sensitive | lineage4.9 | None | SRR1180148 | Sensitive | lineage4.9 | None | SRR1180250 | Other | lineage4.9 | None | SRR1180300 | Sensitive | lineage4.9 | None | SRR1180312 | Sensitive | lineage4.9 | None | SRR1180345 | Other | lineage4.9 | None | SRR1180355 | Sensitive | lineage4.9 | None | SRR1180375 | Sensitive | lineage4.9 | None | SRR1180391 | Sensitive | lineage4.9 | None | SRR1180977 | Sensitive | lineage4.9 | None | SRR1180399 | Sensitive | lineage4.9 | None | SRR1180406 | Sensitive | lineage4.9 | None | SRR1180410 | Sensitive | lineage4.9;lineage2.2 | None | SRR1180413 | Sensitive | lineage4.9 | None | SRR1180420 | Sensitive | lineage4.9 | None | SRR1180444 | Sensitive | lineage4.9 | None | SRR1181214 | Other | lineage4.9 | None | SRR1180996 | HR-TB | lineage4 | None | SRR13180363 | Sensitive | lineage4.1.2.1 | None | SRR1181237 | Sensitive | lineage2.2 | None | SRR1181325 | Sensitive | lineage4.9 | None | SRR1181368 | Other | lineage4.9 | None | SRR1181402 | Sensitive | lineage4.9 | None | SRR1183054 | Sensitive | lineage4.9 | None | SRR1184308 | Sensitive | lineage4.9 | None | SRR1196545 | HR-TB | lineage4.9 | None | SRR12199424 | Other | lineage1.1 | None | SRR13180204 | Sensitive | lineage3 | None | SRR1181283 | Sensitive | lineage4.9 | None | SRR1181349 | Sensitive | lineage4.4.1.1.1 | None | SRR1181351 | Sensitive | lineage4.9 | None | SRR1181390 | Sensitive | lineage2 | None | SRR1183965 | Sensitive | lineage4.9 | None | SRR1184021 | Sensitive | lineage4.9 | None | SRR11972425 | Pre-XDR-TB | lineage2.2.1 | None | SRR1791747 | Other | La1.8.1 | None | SRR16156775 | Other | lineage4.9 | None | SRR13888750 | Other | La2 | None | SRR16627752 | RR-TB | lineage4.4 | None | SRR18002887 | MDR-TB | lineage2.2.1.1 | None | SRR18002875 | MDR-TB | lineage2.2.2 | None | SRR18002974 | Pre-XDR-TB | lineage2.2.1 | None | SRR18002981 | Other | lineage2.2.1 | None | SRR18003047 | MDR-TB | lineage2.2.1 | None | SRR20969475 | Other | lineage1.2.1.2 | None | SRR18665454 | Sensitive | lineage4.1.1 | None | SRR18913742 | Sensitive | lineage3.1.3 | None | SRR19428494 | Sensitive | lineage4.3.4.2 | None | SRR18909918 | Other | lineage2.2.1.1 | None | SRR19303820 | RR-TB | lineage4.8 | None | ERR4815310 | Other | None | SRR2100532 | Sensitive | lineage3 | None | SRR21240055 | Other | lineage4.1.2.1 | None | SRR8692823 | Other | lineage4.9 | None | SAMEA3501065 | RR-TB | lineage4.8 | None | ERR176778 | HR-TB | None | ERR176779 | HR-TB | None | SRR22424787 | Sensitive | lineage4.9 | None | SRR3675472 | Sensitive | lineage4.9 | None | ERR4815165 | Other | lineage4.1.2.1 | None | ERR4814639 | HR-TB | lineage4 | None | ERR161039 | Sensitive | lineage4.3.4 | None | SRR3618864 | Pre-XDR-TB | lineage2.2.1 | None | ERR181744 | HR-TB | None | ERR4815299 | Other | lineage4.8 | gb | SRR3619841 | Pre-XDR-TB | lineage2.2.1 | None | ERR4814595 | Sensitive | lineage4.1.2.1 | gb | ERR4815783 | Other | lineage4.1.2.1 | gb | ERR4815471 | Other | lineage4.9 | None | ERR702405 | Sensitive | lineage2.1 | None | ERR181824 | HR-TB | lineage4 | None | SRR3675246 | Sensitive | lineage4 | None | ERR181887 | HR-TB | None | ERR4815550 | Other | lineage4 | None | SRR3675318 | Other | lineage4.9 | None | ERR176651 | HR-TB | None | SRR3675547 | Other | lineage4.9 | None | ERR176751 | HR-TB | None | SRR3675527 | RR-TB | lineage4.9 | None | ERR4815022 | Other | lineage3.1.2.1 | None | ERR4816964 | Other | lineage4.9 | None | ERR2027220 | Other | lineage3.1.3 | None | ERR2027209 | MDR-TB | lineage1.2.1.1 | None | ERR2027257 | Other | lineage4.1.2.1 | None | ERR2229760 | Other | lineage4.8 | dk | ERR212125 | HR-TB | lineage4 | None | ERR212121 | HR-TB | None | SRR3675548 | Sensitive | lineage4.9 | None | SRR3675567 | Other | lineage4.8 | gb | ERR4817070 | Other | lineage1.1.2 | None | ERR4816417 | Other | lineage4.9 | None | ERR2446509 | Other | lineage3 | nl | ERR4817109 | Other | lineage3 | None | ERR3275709 | HR-TB | lineage3 | nl | ERR4816548 | MDR-TB | lineage4.5 | None | ERR4816571 | Other | lineage1.1.2 | None | SRR5341384 | Sensitive | lineage4.9 | None | ERR4816569 | Other | lineage4.3.3 | gb | ERR4817434 | Other | lineage3 | None | SRR4034178 | Sensitive | lineage4.3.2.1 | za | ERR4816762 | Other | lineage4;lineage2 | None | ERR4816833 | Other | lineage4.1.1.3 | None | ERR4816828 | Other | lineage1.1.1 | gb | ERR4816868 | Other | lineage4.4.1.1 | None | SRR4035792 | Sensitive | lineage4.1.2 | None | ERR4815815 | Sensitive | lineage4 | None | ERR4817948 | Other | lineage3 | gb | ERR4817667 | HR-TB | lineage4.8 | None | ERR228175 | Sensitive | lineage3 | None | ERR4818110 | Sensitive | lineage4.9 | None | ERR2513121 | Sensitive | lineage3.1.3 | None | ERR2512599 | Other | lineage3 | gb | SAMEA3501063 | RR-TB | lineage4.8 | None | ERR4819041 | Sensitive | lineage4.3.3 | gb | ERR4818432 | HR-TB | lineage4.5 | gb | ERR4819051 | Other | lineage4 | None | SRR5341366 | Sensitive | lineage4 | None | ERR2513273 | Other | lineage4.1.2.1 | None | ERR4818561 | HR-TB | lineage4 | None | ERR4817628 | Sensitive | lineage4.8 | gb | ERR4818536 | Other | lineage4.9 | None | SRR5341453 | Sensitive | None | ERR4817554 | Other | lineage1.1.1 | None | ERR4820723 | RR-TB | lineage4.4.1.1 | None | ERR2515397 | Other | lineage2.2.1 | None | SAMEA3501067 | RR-TB | lineage4.8 | None | SRR5341387 | Other | lineage4 | None | SRR5341396 | Other | lineage4 | None | ERR2513910 | Other | lineage3 | gb | ERR4819357 | Other | lineage4.9 | None | ERR4819314 | Other | lineage1.1.1 | None | SRR5341425 | Other | lineage4 | None | ERR4819462 | Other | lineage4 | None | ERR2514215 | Other | lineage2.2.1 | gb | ERR4819533 | Other | lineage1.1.2 | None | ERR4819641 | HR-TB | lineage4.6.2.2 | None | ERR4819546 | HR-TB | lineage3 | None | SRR5341455 | Sensitive | lineage4 | None | ERR1035138 | MDR-TB | None | SRR5341298 | Sensitive | lineage4 | None | SRR5341300 | Other | lineage4 | None | ERR4820798 | Other | lineage3.1.2.1 | gb | ERR4819933 | Other | lineage4.9 | None | SRR5341299 | Sensitive | lineage4 | None | SRR5341308 | Sensitive | lineage4 | None | SRR5341303 | RR-TB | lineage4 | None | SAMEA3501070 | RR-TB | lineage4.8 | None | SRR5341323 | Sensitive | lineage4 | None | ERR2514926 | Other | lineage4.6.2.2 | gb | SRR5341310 | Other | lineage1.1.2 | None | ERR2516755 | HR-TB | lineage3.1.1 | gb | SRR5341341 | Pre-XDR-TB | lineage2.2.1 | None | ERR4820130 | Other | lineage3 | None | ERR4820152 | Sensitive | lineage4.6.1.2 | gb | ERR2515230 | Sensitive | lineage4.8 | None | SRR5341461 | Sensitive | lineage4 | None | SRR5341467 | Other | lineage4 | None | SRR5341465 | Pre-XDR-TB | lineage2.2.1 | None | ERR4821796 | Other | lineage4.1.1 | None | SRR5341469 | Other | lineage4 | None | ERR4821811 | RR-TB | lineage4.9 | None | SAMEA3501052 | RR-TB | lineage4.8 | None | SRR6045503 | HR-TB | None | SRR6045496 | Other | lineage6.1.3 | None | ERR4821136 | Other | lineage4.2.1 | gb | SRR6046117 | RR-TB | lineage4.9 | None | SRR5535923 | MDR-TB | lineage4.4.1.1 | None | ERR2706950 | MDR-TB | lineage5.2 | cd | SRR5818395 | Sensitive | lineage4.9 | None | ERR4822133 | MDR-TB | lineage3 | None | SRR6045642 | Other | lineage3.1.2.2 | None | SRR5818389 | Other | lineage4.9 | None | SRR5818397 | Other | lineage4.9 | None | SRR5818647 | RR-TB | lineage4.3.4.2.1 | None | SRR5818448 | Other | lineage4.9 | None | SRR6045359 | Sensitive | lineage4.9 | None | SRR6045892 | Sensitive | None | SRR6044875 | HR-TB | lineage4.9 | None | SRR6044952 | RR-TB | lineage4.9 | None | SRR6045010 | Other | lineage4 | None | SRR6045849 | Other | lineage4.4.1.1 | None | SRR6044904 | Other | lineage3 | None | SRR6046259 | Sensitive | lineage4.9 | None | ERR4831617 | MDR-TB | lineage2.2.1 | None | SRR6046385 | Other | lineage4.9 | None | SRR6046611 | HR-TB | lineage4.9 | None | SRR6511621 | HR-TB | None | ERR4832061 | Sensitive | lineage2.2.1 | vn | ERR2851356 | Sensitive | lineage4.9 | None | SRR6046737 | Other | lineage4.9 | None | ERR323037 | HR-TB | lineage4 | None | ERR4832002 | Pre-XDR-TB | lineage2.1 | None | ERR4831618 | MDR-TB | lineage2.1 | None | ERR4831620 | MDR-TB | lineage2.2.1 | None | ERR4831616 | MDR-TB | lineage2.2.1 | None | ERR4831763 | HR-TB | lineage4.5;lineage2.2 | None | ERR4831621 | MDR-TB | lineage2.2.1.1 | None | ERR4831657 | MDR-TB | lineage2.2.1 | None | SRR6832644 | Other | lineage4.3.3 | None | ERR4831826 | MDR-TB | lineage2.2.1 | vn | ERR4831839 | MDR-TB | lineage2.2.1 | None | SRR6855878 | Other | lineage2.2.1 | None | SRR6855695 | Sensitive | lineage4.8 | None | SRR6981961 | Sensitive | lineage2.2.1 | None | ERR3275190 | Other | lineage3 | nl | ERR502510 | Sensitive | lineage4 | None | SRR6981999 | Sensitive | lineage2.2.1 | None | SRR7535082 | Sensitive | lineage4 | None | SRR7131195 | Other | lineage2.2.1 | None | SRR9941001 | Sensitive | lineage4.9 | None | SRR9970980 | Other | lineage4.1.2 | None | SRR9970985 | Sensitive | lineage4.3.2.1 | None | SRR9970979 | Sensitive | lineage4.8 | None | SRR9970981 | RR-TB | lineage4.3.2.1 | None | ERR323066 | Sensitive | lineage4 | None | SRR9971041 | MDR-TB | lineage4.3.3 | None | SRR9971080 | RR-TB | lineage2.2.1 | None | SRR7755654 | Pre-XDR-TB | lineage4.2.1 | None | SRR9971235 | XDR-TB | lineage4.4.1.1.1 | None | SRR8651616 | MDR-TB | lineage2.2.1 | None | SRR9971150 | RR-TB | lineage4.8.1 | None | ERR323045 | HR-TB | None | ERR323056 | HR-TB | lineage4.4.1.2 | None | DRR188816 | Sensitive | lineage4.2.2 | None | ERR323085 | Sensitive | lineage4 | None | ERR036207 | Other | lineage4.9 | None | ERR108471 | HR-TB | lineage4 | None | ERR1035122 | Sensitive | None | ERR1063839 | HR-TB | lineage2.2 | None | ERR1063857 | HR-TB | None | ERR1063862 | HR-TB | None | ERR1063858 | HR-TB | None | ERR1063859 | HR-TB | None | ERR10796597 | Other | lineage4 | None | ERR10796598 | RR-TB | lineage4.9 | None | ERR10796632 | Other | lineage4.3.3 | None | ERR067712 | HR-TB | lineage4 | None | ERR1023525 | HR-TB | lineage4 | None | ERR1034634 | HR-TB | None | ERR1063896 | Sensitive | None | ERR137286 | Sensitive | lineage4 | None | ERR3797073 | HR-TB | La1.8.1 | None | ERR3273109 | MDR-TB | lineage4 | None | ERR3283025 | HR-TB | None | ERR3283030 | HR-TB | lineage4.9 | None | ERR3468488 | RR-TB | La1.8.1 | None | ERR3797015 | HR-TB | None | ERR3797019 | Other | La1.8.1 | None | ERR3283010 | Other | La1 | None | ERR3283040 | HR-TB | None | ERR3445487 | Other | La1.7.X-unk4 | None | ERR3445503 | HR-TB | None | ERR400345 | Other | lineage4 | None | ERR3797080 | HR-TB | lineage4.9 | None | ERR3797086 | Other | lineage4.9 | None | ERR400320 | Sensitive | lineage4 | None | ERR400326 | Sensitive | lineage4 | None | ERR400336 | Sensitive | lineage4 | None | ERR4024991 | Other | None | ERR4178226 | Sensitive | lineage4 | None | ERR405209 | Sensitive | lineage4 | None | ERR405219 | HR-TB | lineage4;lineage3.1 | None | ERR473334 | HR-TB | lineage4.9 | None | ERR4769506 | Sensitive | La1.3 | None | ERR4769404 | Other | La1.3 | None | ERR4769408 | Other | La1.3 | None | ERR4769433 | Pre-XDR-TB | lineage4.9 | None | ERR4769474 | HR-TB | lineage4 | None | ERR4769502 | RR-TB | lineage4.9;La1.3 | None | ERR4769418 | Other | La1.2 | None | ERR4769508 | RR-TB | lineage4.9 | None | ERR4769555 | Other | La1.3 | None | ERR4769516 | Other | La1.3 | None | ERR4769514 | Other | La1.3 | None | ERR4769547 | Sensitive | lineage4.9;La1.3 | None | ERR4769521 | HR-TB | None | ERR4769550 | Other | lineage4.9;La1.3 | None | ERR4769518 | Sensitive | lineage4.9 | None | ERR4769530 | RR-TB | lineage4.9 | None | ERR4769548 | Other | lineage4.9 | None | ERR4769553 | RR-TB | lineage4.9 | None | ERR4769552 | Other | La1.3 | None | ERR4769554 | RR-TB | lineage4.9 | None | ERR4796254 | Sensitive | lineage4 | None | ERR4797474 | Other | None | ERR4797184 | Sensitive | lineage4 | None | ERR4797264 | Sensitive | None | ERR4798823 | HR-TB | lineage4 | None | ERR4798099 | Other | None | ERR4799378 | Sensitive | lineage4 | None | ERR4811031 | Sensitive | lineage4.5 | None | ERR4812155 | Sensitive | None | ERR4811030 | Sensitive | None | ERR5866451 | MDR-TB | lineage2.2 | None | ERR5917972 | MDR-TB | lineage4.4.1.1 | za | ERR5908249 | Sensitive | lineage4.9 | None | ERR6358991 | HR-TB | None | ERR6359066 | HR-TB | lineage4 | None | ERR6359070 | Other | lineage4.9 | None | ERR6865502 | Sensitive | lineage4 | None | ERR6359069 | Other | lineage4.9 | None | ERR736831 | HR-TB | lineage4.9 | None | ERR6866125 | Sensitive | lineage4.1.2.1 | None | ERR736817 | HR-TB | lineage4.3.4 | None | ERR6866022 | Other | None | ERR6866639 | Other | None | ERR6866807 | HR-TB | lineage4 | None | ERR9117679 | Sensitive | lineage2.2.1 | None | ERR736875 | HR-TB | lineage4 | None | ERR8479578 | Sensitive | lineage1.1.3.1 | None | ERR736834 | Sensitive | lineage4 | None | ERR736856 | HR-TB | lineage4 | None | ERR736872 | Sensitive | lineage4 | None | ERR751326 | Sensitive | lineage4 | None | ERR9119049 | Sensitive | lineage4.9 | None | ERR9786346 | Sensitive | lineage4.3.4.2 | None |
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