EBG00000313339 - n.2389G>T


Drug resistance types
109 Sensitive 24 RR-TB 57 HR-TB 25 MDR-TB 10 Pre-XDR-TB 1 XDR-TB 111 Other
lineage Counts
lineage Count
lineage6 2
lineage6.1.3 2
lineage2.2.1 26
lineage4.8 15
lineage4.9 84
lineage4.4.1.1.1 3
La1.8.1 5
lineage4 59
lineage4.9;lineage2.2 1
lineage4.1.2.1 8
lineage2.2 3
lineage1.1 1
lineage3 15
lineage2 1
La2 1
lineage4.4 1
lineage2.2.1.1 3
lineage2.2.2 1
lineage1.2.1.2 1
lineage4.1.1 2
lineage3.1.3 3
lineage4.3.4.2 2
35
lineage4.3.4 2
lineage2.1 3
lineage3.1.2.1 2
lineage1.2.1.1 1
lineage1.1.2 4
lineage4.5 3
lineage4.3.3 5
lineage4.3.2.1 3
lineage4;lineage2 1
lineage4.1.1.3 1
lineage1.1.1 3
lineage4.4.1.1 5
lineage4.1.2 2
lineage4.6.2.2 2
lineage3.1.1 1
lineage4.6.1.2 1
lineage4.2.1 2
lineage5.2 1
lineage3.1.2.2 1
lineage4.3.4.2.1 1
lineage4.5;lineage2.2 1
lineage4.8.1 1
lineage4.4.1.2 1
lineage4.2.2 1
La1 1
La1.7.X-unk4 1
lineage4;lineage3.1 1
La1.3 7
lineage4.9;La1.3 3
La1.2 1
lineage1.1.3.1 1
spoligotype Counts
spoligotype Count
None 337
Geographic prevalence
Country level data for this variant is available for 27 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR9787030 Sensitive lineage6 None
ERR9787256 Other lineage6.1.3 None
ERR9787362 Sensitive lineage6 None
SRR10315567 Other lineage2.2.1 None
SRR10315751 MDR-TB lineage4.8 None
SRR10397241 HR-TB lineage2.2.1 None
SRR1172717 Other lineage4.9 None
SRR11349145 Pre-XDR-TB lineage4.4.1.1.1 None
SRR11462861 Other La1.8.1 None
SRR1158918 Sensitive lineage4 None
SRR1172807 Sensitive lineage4.9 None
SRR1173515 HR-TB lineage4.9 None
SRR1173777 Other lineage4 None
SRR1173568 Other lineage4.9 None
SRR1175500 MDR-TB lineage4 None
SRR1175487 Sensitive lineage4.9 None
SRR1175506 Sensitive lineage4.9 None
SRR1175512 Sensitive lineage4.9 None
SRR1175507 MDR-TB lineage4 None
SRR1175508 Other lineage4.9 None
SRR1175513 Other lineage4.9 None
SRR1180319 Sensitive lineage4.9 None
SRR1180148 Sensitive lineage4.9 None
SRR1180250 Other lineage4.9 None
SRR1180300 Sensitive lineage4.9 None
SRR1180312 Sensitive lineage4.9 None
SRR1180345 Other lineage4.9 None
SRR1180355 Sensitive lineage4.9 None
SRR1180375 Sensitive lineage4.9 None
SRR1180391 Sensitive lineage4.9 None
SRR1180977 Sensitive lineage4.9 None
SRR1180399 Sensitive lineage4.9 None
SRR1180406 Sensitive lineage4.9 None
SRR1180410 Sensitive lineage4.9;lineage2.2 None
SRR1180413 Sensitive lineage4.9 None
SRR1180420 Sensitive lineage4.9 None
SRR1180444 Sensitive lineage4.9 None
SRR1181214 Other lineage4.9 None
SRR1180996 HR-TB lineage4 None
SRR13180363 Sensitive lineage4.1.2.1 None
SRR1181237 Sensitive lineage2.2 None
SRR1181325 Sensitive lineage4.9 None
SRR1181368 Other lineage4.9 None
SRR1181402 Sensitive lineage4.9 None
SRR1183054 Sensitive lineage4.9 None
SRR1184308 Sensitive lineage4.9 None
SRR1196545 HR-TB lineage4.9 None
SRR12199424 Other lineage1.1 None
SRR13180204 Sensitive lineage3 None
SRR1181283 Sensitive lineage4.9 None
SRR1181349 Sensitive lineage4.4.1.1.1 None
SRR1181351 Sensitive lineage4.9 None
SRR1181390 Sensitive lineage2 None
SRR1183965 Sensitive lineage4.9 None
SRR1184021 Sensitive lineage4.9 None
SRR11972425 Pre-XDR-TB lineage2.2.1 None
SRR1791747 Other La1.8.1 None
SRR16156775 Other lineage4.9 None
SRR13888750 Other La2 None
SRR16627752 RR-TB lineage4.4 None
SRR18002887 MDR-TB lineage2.2.1.1 None
SRR18002875 MDR-TB lineage2.2.2 None
SRR18002974 Pre-XDR-TB lineage2.2.1 None
SRR18002981 Other lineage2.2.1 None
SRR18003047 MDR-TB lineage2.2.1 None
SRR20969475 Other lineage1.2.1.2 None
SRR18665454 Sensitive lineage4.1.1 None
SRR18913742 Sensitive lineage3.1.3 None
SRR19428494 Sensitive lineage4.3.4.2 None
SRR18909918 Other lineage2.2.1.1 None
SRR19303820 RR-TB lineage4.8 None
ERR4815310 Other None
SRR2100532 Sensitive lineage3 None
SRR21240055 Other lineage4.1.2.1 None
SRR8692823 Other lineage4.9 None
SAMEA3501065 RR-TB lineage4.8 None
ERR176778 HR-TB None
ERR176779 HR-TB None
SRR22424787 Sensitive lineage4.9 None
SRR3675472 Sensitive lineage4.9 None
ERR4815165 Other lineage4.1.2.1 None
ERR4814639 HR-TB lineage4 None
ERR161039 Sensitive lineage4.3.4 None
SRR3618864 Pre-XDR-TB lineage2.2.1 None
ERR181744 HR-TB None
ERR4815299 Other lineage4.8 gb
SRR3619841 Pre-XDR-TB lineage2.2.1 None
ERR4814595 Sensitive lineage4.1.2.1 gb
ERR4815783 Other lineage4.1.2.1 gb
ERR4815471 Other lineage4.9 None
ERR702405 Sensitive lineage2.1 None
ERR181824 HR-TB lineage4 None
SRR3675246 Sensitive lineage4 None
ERR181887 HR-TB None
ERR4815550 Other lineage4 None
SRR3675318 Other lineage4.9 None
ERR176651 HR-TB None
SRR3675547 Other lineage4.9 None
ERR176751 HR-TB None
SRR3675527 RR-TB lineage4.9 None
ERR4815022 Other lineage3.1.2.1 None
ERR4816964 Other lineage4.9 None
ERR2027220 Other lineage3.1.3 None
ERR2027209 MDR-TB lineage1.2.1.1 None
ERR2027257 Other lineage4.1.2.1 None
ERR2229760 Other lineage4.8 dk
ERR212125 HR-TB lineage4 None
ERR212121 HR-TB None
SRR3675548 Sensitive lineage4.9 None
SRR3675567 Other lineage4.8 gb
ERR4817070 Other lineage1.1.2 None
ERR4816417 Other lineage4.9 None
ERR2446509 Other lineage3 nl
ERR4817109 Other lineage3 None
ERR3275709 HR-TB lineage3 nl
ERR4816548 MDR-TB lineage4.5 None
ERR4816571 Other lineage1.1.2 None
SRR5341384 Sensitive lineage4.9 None
ERR4816569 Other lineage4.3.3 gb
ERR4817434 Other lineage3 None
SRR4034178 Sensitive lineage4.3.2.1 za
ERR4816762 Other lineage4;lineage2 None
ERR4816833 Other lineage4.1.1.3 None
ERR4816828 Other lineage1.1.1 gb
ERR4816868 Other lineage4.4.1.1 None
SRR4035792 Sensitive lineage4.1.2 None
ERR4815815 Sensitive lineage4 None
ERR4817948 Other lineage3 gb
ERR4817667 HR-TB lineage4.8 None
ERR228175 Sensitive lineage3 None
ERR4818110 Sensitive lineage4.9 None
ERR2513121 Sensitive lineage3.1.3 None
ERR2512599 Other lineage3 gb
SAMEA3501063 RR-TB lineage4.8 None
ERR4819041 Sensitive lineage4.3.3 gb
ERR4818432 HR-TB lineage4.5 gb
ERR4819051 Other lineage4 None
SRR5341366 Sensitive lineage4 None
ERR2513273 Other lineage4.1.2.1 None
ERR4818561 HR-TB lineage4 None
ERR4817628 Sensitive lineage4.8 gb
ERR4818536 Other lineage4.9 None
SRR5341453 Sensitive None
ERR4817554 Other lineage1.1.1 None
ERR4820723 RR-TB lineage4.4.1.1 None
ERR2515397 Other lineage2.2.1 None
SAMEA3501067 RR-TB lineage4.8 None
SRR5341387 Other lineage4 None
SRR5341396 Other lineage4 None
ERR2513910 Other lineage3 gb
ERR4819357 Other lineage4.9 None
ERR4819314 Other lineage1.1.1 None
SRR5341425 Other lineage4 None
ERR4819462 Other lineage4 None
ERR2514215 Other lineage2.2.1 gb
ERR4819533 Other lineage1.1.2 None
ERR4819641 HR-TB lineage4.6.2.2 None
ERR4819546 HR-TB lineage3 None
SRR5341455 Sensitive lineage4 None
ERR1035138 MDR-TB None
SRR5341298 Sensitive lineage4 None
SRR5341300 Other lineage4 None
ERR4820798 Other lineage3.1.2.1 gb
ERR4819933 Other lineage4.9 None
SRR5341299 Sensitive lineage4 None
SRR5341308 Sensitive lineage4 None
SRR5341303 RR-TB lineage4 None
SAMEA3501070 RR-TB lineage4.8 None
SRR5341323 Sensitive lineage4 None
ERR2514926 Other lineage4.6.2.2 gb
SRR5341310 Other lineage1.1.2 None
ERR2516755 HR-TB lineage3.1.1 gb
SRR5341341 Pre-XDR-TB lineage2.2.1 None
ERR4820130 Other lineage3 None
ERR4820152 Sensitive lineage4.6.1.2 gb
ERR2515230 Sensitive lineage4.8 None
SRR5341461 Sensitive lineage4 None
SRR5341467 Other lineage4 None
SRR5341465 Pre-XDR-TB lineage2.2.1 None
ERR4821796 Other lineage4.1.1 None
SRR5341469 Other lineage4 None
ERR4821811 RR-TB lineage4.9 None
SAMEA3501052 RR-TB lineage4.8 None
SRR6045503 HR-TB None
SRR6045496 Other lineage6.1.3 None
ERR4821136 Other lineage4.2.1 gb
SRR6046117 RR-TB lineage4.9 None
SRR5535923 MDR-TB lineage4.4.1.1 None
ERR2706950 MDR-TB lineage5.2 cd
SRR5818395 Sensitive lineage4.9 None
ERR4822133 MDR-TB lineage3 None
SRR6045642 Other lineage3.1.2.2 None
SRR5818389 Other lineage4.9 None
SRR5818397 Other lineage4.9 None
SRR5818647 RR-TB lineage4.3.4.2.1 None
SRR5818448 Other lineage4.9 None
SRR6045359 Sensitive lineage4.9 None
SRR6045892 Sensitive None
SRR6044875 HR-TB lineage4.9 None
SRR6044952 RR-TB lineage4.9 None
SRR6045010 Other lineage4 None
SRR6045849 Other lineage4.4.1.1 None
SRR6044904 Other lineage3 None
SRR6046259 Sensitive lineage4.9 None
ERR4831617 MDR-TB lineage2.2.1 None
SRR6046385 Other lineage4.9 None
SRR6046611 HR-TB lineage4.9 None
SRR6511621 HR-TB None
ERR4832061 Sensitive lineage2.2.1 vn
ERR2851356 Sensitive lineage4.9 None
SRR6046737 Other lineage4.9 None
ERR323037 HR-TB lineage4 None
ERR4832002 Pre-XDR-TB lineage2.1 None
ERR4831618 MDR-TB lineage2.1 None
ERR4831620 MDR-TB lineage2.2.1 None
ERR4831616 MDR-TB lineage2.2.1 None
ERR4831763 HR-TB lineage4.5;lineage2.2 None
ERR4831621 MDR-TB lineage2.2.1.1 None
ERR4831657 MDR-TB lineage2.2.1 None
SRR6832644 Other lineage4.3.3 None
ERR4831826 MDR-TB lineage2.2.1 vn
ERR4831839 MDR-TB lineage2.2.1 None
SRR6855878 Other lineage2.2.1 None
SRR6855695 Sensitive lineage4.8 None
SRR6981961 Sensitive lineage2.2.1 None
ERR3275190 Other lineage3 nl
ERR502510 Sensitive lineage4 None
SRR6981999 Sensitive lineage2.2.1 None
SRR7535082 Sensitive lineage4 None
SRR7131195 Other lineage2.2.1 None
SRR9941001 Sensitive lineage4.9 None
SRR9970980 Other lineage4.1.2 None
SRR9970985 Sensitive lineage4.3.2.1 None
SRR9970979 Sensitive lineage4.8 None
SRR9970981 RR-TB lineage4.3.2.1 None
ERR323066 Sensitive lineage4 None
SRR9971041 MDR-TB lineage4.3.3 None
SRR9971080 RR-TB lineage2.2.1 None
SRR7755654 Pre-XDR-TB lineage4.2.1 None
SRR9971235 XDR-TB lineage4.4.1.1.1 None
SRR8651616 MDR-TB lineage2.2.1 None
SRR9971150 RR-TB lineage4.8.1 None
ERR323045 HR-TB None
ERR323056 HR-TB lineage4.4.1.2 None
DRR188816 Sensitive lineage4.2.2 None
ERR323085 Sensitive lineage4 None
ERR036207 Other lineage4.9 None
ERR108471 HR-TB lineage4 None
ERR1035122 Sensitive None
ERR1063839 HR-TB lineage2.2 None
ERR1063857 HR-TB None
ERR1063862 HR-TB None
ERR1063858 HR-TB None
ERR1063859 HR-TB None
ERR10796597 Other lineage4 None
ERR10796598 RR-TB lineage4.9 None
ERR10796632 Other lineage4.3.3 None
ERR067712 HR-TB lineage4 None
ERR1023525 HR-TB lineage4 None
ERR1034634 HR-TB None
ERR1063896 Sensitive None
ERR137286 Sensitive lineage4 None
ERR3797073 HR-TB La1.8.1 None
ERR3273109 MDR-TB lineage4 None
ERR3283025 HR-TB None
ERR3283030 HR-TB lineage4.9 None
ERR3468488 RR-TB La1.8.1 None
ERR3797015 HR-TB None
ERR3797019 Other La1.8.1 None
ERR3283010 Other La1 None
ERR3283040 HR-TB None
ERR3445487 Other La1.7.X-unk4 None
ERR3445503 HR-TB None
ERR400345 Other lineage4 None
ERR3797080 HR-TB lineage4.9 None
ERR3797086 Other lineage4.9 None
ERR400320 Sensitive lineage4 None
ERR400326 Sensitive lineage4 None
ERR400336 Sensitive lineage4 None
ERR4024991 Other None
ERR4178226 Sensitive lineage4 None
ERR405209 Sensitive lineage4 None
ERR405219 HR-TB lineage4;lineage3.1 None
ERR473334 HR-TB lineage4.9 None
ERR4769506 Sensitive La1.3 None
ERR4769404 Other La1.3 None
ERR4769408 Other La1.3 None
ERR4769433 Pre-XDR-TB lineage4.9 None
ERR4769474 HR-TB lineage4 None
ERR4769502 RR-TB lineage4.9;La1.3 None
ERR4769418 Other La1.2 None
ERR4769508 RR-TB lineage4.9 None
ERR4769555 Other La1.3 None
ERR4769516 Other La1.3 None
ERR4769514 Other La1.3 None
ERR4769547 Sensitive lineage4.9;La1.3 None
ERR4769521 HR-TB None
ERR4769550 Other lineage4.9;La1.3 None
ERR4769518 Sensitive lineage4.9 None
ERR4769530 RR-TB lineage4.9 None
ERR4769548 Other lineage4.9 None
ERR4769553 RR-TB lineage4.9 None
ERR4769552 Other La1.3 None
ERR4769554 RR-TB lineage4.9 None
ERR4796254 Sensitive lineage4 None
ERR4797474 Other None
ERR4797184 Sensitive lineage4 None
ERR4797264 Sensitive None
ERR4798823 HR-TB lineage4 None
ERR4798099 Other None
ERR4799378 Sensitive lineage4 None
ERR4811031 Sensitive lineage4.5 None
ERR4812155 Sensitive None
ERR4811030 Sensitive None
ERR5866451 MDR-TB lineage2.2 None
ERR5917972 MDR-TB lineage4.4.1.1 za
ERR5908249 Sensitive lineage4.9 None
ERR6358991 HR-TB None
ERR6359066 HR-TB lineage4 None
ERR6359070 Other lineage4.9 None
ERR6865502 Sensitive lineage4 None
ERR6359069 Other lineage4.9 None
ERR736831 HR-TB lineage4.9 None
ERR6866125 Sensitive lineage4.1.2.1 None
ERR736817 HR-TB lineage4.3.4 None
ERR6866022 Other None
ERR6866639 Other None
ERR6866807 HR-TB lineage4 None
ERR9117679 Sensitive lineage2.2.1 None
ERR736875 HR-TB lineage4 None
ERR8479578 Sensitive lineage1.1.3.1 None
ERR736834 Sensitive lineage4 None
ERR736856 HR-TB lineage4 None
ERR736872 Sensitive lineage4 None
ERR751326 Sensitive lineage4 None
ERR9119049 Sensitive lineage4.9 None
ERR9786346 Sensitive lineage4.3.4.2 None