EBG00000313339 - n.794T>C
Drug resistance types
0 Sensitive
8 RR-TB
0 HR-TB
6 MDR-TB
9 Pre-XDR-TB
0 XDR-TB
32 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9 | 16 |
| lineage3 | 4 |
| La1.8.1 | 3 |
| lineage2.2.1 | 9 |
| lineage4.1.1.3 | 1 |
| lineage3.1.1 | 1 |
| lineage4.3.4.1 | 2 |
| lineage4.2.1 | 3 |
| La1.7.1 | 2 |
| lineage4.1.2.1 | 2 |
| lineage2.2;lineage4 | 1 |
| lineage2.2;lineage4.9 | 1 |
| lineage4.7 | 1 |
| lineage1.2.1.2 | 1 |
| La1.2 | 1 |
| lineage4.3.3 | 1 |
| lineage4.2.2.2 | 1 |
| lineage4.3.4.2.1 | 1 |
| La1.4 | 1 |
| lineage4.4.1.1 | 1 |
| lineage2.2.1;lineage4.9 | 1 |
| lineage3.1.2.1;lineage4.9 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 55 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR6046250 | Other | lineage4.9 | None | ERR4818831 | Other | lineage3 | None | SRR7236330 | Other | La1.8.1 | None | SRR16156697 | RR-TB | lineage2.2.1 | None | SRR1184329 | Other | lineage4.9 | None | SRR1173185 | Other | lineage4.9 | None | ERR4819175 | Other | lineage4.1.1.3 | gb | ERR5917985 | MDR-TB | lineage2.2.1 | None | SRR12634609 | MDR-TB | lineage3.1.1 | None | SRR1175472 | RR-TB | lineage4.3.4.1 | None | SRR14782539 | MDR-TB | lineage4.2.1 | None | ERR4769417 | Pre-XDR-TB | lineage4.9 | None | SRR21469200 | Other | La1.7.1 | None | ERR4822138 | Other | lineage4.1.2.1 | None | SRR11972425 | Pre-XDR-TB | lineage2.2.1 | None | DRR184982 | Other | lineage2.2.1 | None | SRR16156832 | RR-TB | lineage2.2;lineage4 | None | ERR4815550 | Other | lineage2.2;lineage4.9 | None | ERR987707 | MDR-TB | lineage4.7 | None | SRR16156775 | Other | lineage4.9 | None | SRR21469201 | Other | La1.7.1 | None | DRR184629 | Other | lineage2.2.1 | None | SRR20969475 | Other | lineage1.2.1.2 | None | SRR5341267 | Pre-XDR-TB | lineage3 | None | ERR4814976 | Other | lineage4.9 | None | ERR4769493 | Other | lineage4.9 | None | ERR3797062 | RR-TB | lineage4.9 | None | ERR3283006 | RR-TB | lineage4.9 | None | SRR1792011 | Other | La1.8.1 | None | ERR4769418 | Other | La1.2 | None | SRR1175491 | MDR-TB | lineage4.3.4.1 | None | ERR867570 | RR-TB | lineage4.9 | None | SRR21240055 | Other | lineage4.1.2.1 | None | ERR4816322 | Other | lineage4.9 | None | SRR3619764 | Pre-XDR-TB | lineage2.2.1 | None | SRR11349211 | Pre-XDR-TB | lineage4.3.3 | None | SRR3618864 | Pre-XDR-TB | lineage2.2.1 | None | ERR867538 | Other | lineage4.2.2.2 | None | ERR2446509 | Other | lineage3 | nl | SRR5818647 | Other | lineage4.3.4.2.1 | None | ERR4816852 | Other | lineage4.9 | None | ERR867541 | MDR-TB | lineage4.2.1 | None | SRR3619841 | Pre-XDR-TB | lineage2.2.1 | None | SRR1792022 | Other | La1.8.1 | None | SRR16278274 | Other | La1.4 | None | ERR867571 | Other | lineage4.9 | None | SRR1196478 | Other | lineage4.9 | None | SRR17567917 | RR-TB | lineage4.4.1.1 | None | ERR4815310 | Other | lineage2.2.1;lineage4.9 | None | ERR3275190 | Other | lineage3 | nl | ERR867524 | Pre-XDR-TB | lineage4.2.1 | None | SRR3601585 | Pre-XDR-TB | lineage2.2.1 | None | ERR4769433 | RR-TB | lineage4.9 | None | ERR2027290 | Other | lineage3.1.2.1;lineage4.9 | None | ERR867572 | Other | lineage4.9 | None |
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