EBG00000313339 - n.794T>C
Drug resistance types
7 Sensitive
16 RR-TB
4 HR-TB
12 MDR-TB
11 Pre-XDR-TB
0 XDR-TB
57 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.3.3 | 4 |
| lineage2.2.1 | 12 |
| La1.8.1 | 4 |
| lineage3 | 9 |
| lineage2.2.2 | 1 |
| lineage4.9 | 25 |
| lineage4 | 6 |
| lineage4.1.2.1 | 12 |
| La1.2 | 1 |
| lineage4.9;La1.3 | 1 |
| lineage4.2.2.2 | 1 |
| lineage4.1.1.3 | 2 |
| 3 | |
| lineage4.7 | 1 |
| lineage3.1.1 | 1 |
| lineage4.4.2 | 1 |
| lineage4.2.1 | 1 |
| La1.4 | 1 |
| lineage4.4.1.1 | 3 |
| lineage1.2.1.2 | 1 |
| La1.7.1 | 2 |
| lineage1.1.1 | 2 |
| lineage2.2 | 2 |
| lineage1.2.2.2 | 1 |
| lineage3.1.2.1 | 1 |
| lineage3.1 | 1 |
| lineage4.6.2.2 | 1 |
| lineage4.8 | 2 |
| lineage4.5 | 1 |
| lineage2.1 | 1 |
| lineage1.1.3.1 | 1 |
| lineage4.3.4.2.1 | 1 |
| lineage4.1.4 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 107 |
Geographic prevalence
Country level data for this variant is available for 13 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR6832644 | Other | lineage4.3.3 | None | DRR184932 | Other | lineage2.2.1 | None | SRR8600288 | Other | La1.8.1 | None | DRR184629 | Other | lineage2.2.1 | None | ERR3275190 | Other | lineage3 | nl | DRR184982 | RR-TB | lineage2.2.1 | None | DRR185024 | Other | lineage2.2.2 | None | ERR3283051 | Other | lineage4.9 | None | ERR10796632 | Other | lineage4.3.3 | None | ERR3283006 | RR-TB | lineage4.9 | None | ERR3283043 | Other | lineage4.9 | None | ERR10796597 | Other | lineage4 | None | ERR3283008 | Other | lineage4.9 | None | ERR3797062 | RR-TB | lineage4.9 | None | ERR3797068 | Other | La1.8.1 | None | ERR6359069 | Other | lineage4.9 | None | ERR4024582 | MDR-TB | lineage4.1.2.1 | None | ERR4769419 | Other | lineage4.9 | None | ERR4769417 | Pre-XDR-TB | lineage4.9 | None | ERR6359070 | Other | lineage4.9 | None | ERR4457829 | MDR-TB | lineage4.1.2.1 | None | ERR4769418 | Other | La1.2 | None | ERR4769433 | Pre-XDR-TB | lineage4.9 | None | ERR4769493 | Pre-XDR-TB | lineage4.9;La1.3 | None | ERR4797157 | MDR-TB | lineage4.2.2.2 | in | ERR5917985 | MDR-TB | lineage2.2.1 | None | ERR6197040 | Other | lineage4.9 | None | SRR1175474 | HR-TB | lineage4.9 | None | ERR9786164 | RR-TB | lineage4.1.1.3 | None | SRR11349211 | Pre-XDR-TB | lineage4.3.3 | None | SRR1140736 | RR-TB | None | SRR1173185 | HR-TB | lineage4.9 | None | ERR987707 | MDR-TB | lineage4.7 | None | SRR1173450 | RR-TB | lineage4.9 | None | SRR1175473 | Other | lineage4.9 | None | SRR1184329 | MDR-TB | lineage4.9 | None | SRR1175472 | MDR-TB | lineage4 | None | SRR1175491 | MDR-TB | lineage4 | None | SRR1196478 | MDR-TB | lineage4.9 | None | SRR11972425 | Pre-XDR-TB | lineage2.2.1 | None | SRR16156697 | MDR-TB | lineage2.2.1 | None | SRR12634609 | MDR-TB | lineage3.1.1 | None | SRR13423546 | Other | lineage4.4.2 | None | SRR14782539 | MDR-TB | lineage4.2.1 | None | SRR19226954 | Sensitive | lineage4.1.2.1 | None | SRR16156832 | RR-TB | None | SRR16278274 | Other | La1.4 | None | SRR18913779 | Other | lineage3 | None | SRR16156775 | Other | lineage4.9 | None | SRR17567917 | RR-TB | lineage4.4.1.1 | None | SRR1792011 | Other | La1.8.1 | None | SRR1792022 | Other | La1.8.1 | None | SRR18003031 | HR-TB | lineage2.2.1 | None | SRR20969475 | Other | lineage1.2.1.2 | None | SRR21469201 | Other | La1.7.1 | None | SRR21240055 | Other | lineage4.1.2.1 | None | ERR4815783 | Other | lineage4.1.2.1 | gb | SRR21658550 | Other | lineage1.1.1 | None | SRR21710920 | Sensitive | lineage2.2.1 | None | SRR21727760 | Other | lineage2.2.1 | None | ERR4815310 | Other | None | SRR21469200 | Other | La1.7.1 | None | SRR21722120 | Sensitive | lineage4.1.2.1 | None | SRR3601585 | Pre-XDR-TB | lineage2.2 | None | SRR3619841 | Pre-XDR-TB | lineage2.2.1 | None | SRR3619764 | Pre-XDR-TB | lineage2.2 | None | ERR4815517 | Other | lineage1.2.2.2 | None | SRR3618864 | Pre-XDR-TB | lineage2.2.1 | None | ERR4815550 | Other | lineage4 | None | ERR4816231 | Other | lineage4 | None | ERR4814976 | Other | lineage4.9 | None | ERR4815022 | Other | lineage3.1.2.1 | None | ERR2027290 | RR-TB | lineage3.1 | None | ERR4816322 | Other | lineage4.9 | None | ERR4816293 | Other | lineage4.1.2.1 | None | ERR4816702 | RR-TB | lineage4.6.2.2 | None | ERR2446509 | Other | lineage3 | nl | ERR2229171 | Sensitive | lineage4 | None | ERR4816868 | Other | lineage4.4.1.1 | None | ERR4816852 | Other | lineage4.9 | None | ERR4818699 | Other | lineage4.1.2.1 | gb | ERR4818904 | Other | lineage4.8 | None | ERR4817948 | Other | lineage3 | gb | ERR4818831 | Other | lineage3 | None | ERR4817915 | RR-TB | lineage4.9 | None | ERR4818432 | HR-TB | lineage4.5 | gb | ERR2512660 | Sensitive | lineage3 | gb | ERR4819175 | Other | lineage4.1.1.3 | gb | ERR4817554 | Other | lineage1.1.1 | None | ERR2514708 | Sensitive | lineage4.1.2.1 | None | ERR4820723 | RR-TB | lineage4.4.1.1 | None | ERR2514215 | Other | lineage2.2.1 | gb | SRR5341267 | Pre-XDR-TB | lineage3 | None | ERR4819967 | Other | lineage4.3.3 | None | ERR4819863 | RR-TB | lineage4.9 | None | ERR2516136 | Pre-XDR-TB | lineage4.8 | es | ERR4820193 | Other | lineage3 | None | ERR4821572 | Other | lineage2.1 | None | ERR4821172 | RR-TB | lineage4.9 | None | ERR4821272 | RR-TB | lineage4.1.2.1 | None | ERR4822138 | Other | lineage4.1.2.1 | None | SRR6046250 | Other | lineage4.9 | None | ERR4821616 | Other | lineage1.1.3.1 | None | SRR5818647 | RR-TB | lineage4.3.4.2.1 | None | SRR5818663 | Sensitive | lineage4.1.2.1 | dj | SRR6044904 | Other | lineage3 | None | ERR4828962 | Other | lineage4.1.4 | it |
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