Rv3596c - c.588A>G
Drug resistance types
31 Sensitive
14 RR-TB
11 HR-TB
13 MDR-TB
7 Pre-XDR-TB
0 XDR-TB
15 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9 | 41 |
| lineage4.3.4.2.1 | 3 |
| lineage4.8 | 8 |
| lineage2;lineage4 | 1 |
| lineage2.2.1;lineage4.9 | 1 |
| lineage3.1.3 | 1 |
| lineage2.2.1 | 8 |
| lineage4.3.3 | 4 |
| lineage4.7 | 1 |
| La1.7;lineage4.9 | 2 |
| lineage4.1.1.3 | 1 |
| lineage4.4.1.1.1 | 1 |
| La1.4 | 1 |
| lineage4.1.2.1 | 2 |
| 2 | |
| lineage1.1.1 | 1 |
| lineage2.2.1;lineage4 | 1 |
| lineage3 | 2 |
| lineage4.3.3;lineage4.9 | 1 |
| lineage4.2.2.2 | 1 |
| lineage4.8.1 | 1 |
| lineage4.3.2.1 | 1 |
| La1.8.1 | 1 |
| lineage4.1.2 | 1 |
| lineage4.4.1.1 | 1 |
| La1.7.1;lineage4.9 | 1 |
| lineage4.1.1.1 | 1 |
| lineage4.3.4.2 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 91 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR21677886 | Sensitive | lineage4.9 | None | SRR1175473 | Other | lineage4.9 | None | ERR11465627 | Sensitive | lineage4.3.4.2.1 | None | SRR9971122 | MDR-TB | lineage4.8 | None | ERR1023502 | MDR-TB | lineage2;lineage4 | None | SRR1181390 | Sensitive | lineage2.2.1;lineage4.9 | None | ERR473334 | HR-TB | lineage4.9 | None | SRR1181402 | Sensitive | lineage4.9 | None | ERR6359070 | Sensitive | lineage4.9 | None | ERR4769442 | Sensitive | lineage4.9 | None | SRR18913742 | Sensitive | lineage3.1.3 | None | SRR1180312 | Sensitive | lineage4.9 | None | ERR4817915 | Other | lineage4.9 | None | SRR6045832 | Other | lineage4.9 | None | ERR4769439 | HR-TB | lineage4.9 | None | ERR978765 | RR-TB | lineage4.8 | None | SRR1180345 | Other | lineage4.9 | None | SRR1180440 | Other | lineage4.9 | None | SRR19303820 | RR-TB | lineage4.8 | None | SRR1180444 | Sensitive | lineage4.9 | None | ERR5162090 | RR-TB | lineage4.9 | None | SRR3618864 | Pre-XDR-TB | lineage2.2.1 | None | SRR7755665 | Pre-XDR-TB | lineage4.3.3 | None | ERR987707 | MDR-TB | lineage4.7 | None | ERR4769508 | RR-TB | lineage4.9 | None | SRR1180420 | Sensitive | lineage4.9 | None | ERR216938 | HR-TB | La1.7;lineage4.9 | None | SRR1184308 | Sensitive | lineage4.9 | None | SRR11342647 | MDR-TB | lineage4.1.1.3 | None | SRR11342644 | MDR-TB | lineage4.4.1.1.1 | None | SRR16278274 | Other | La1.4 | None | SRR3619841 | Pre-XDR-TB | lineage2.2.1 | None | ERR1023509 | Other | lineage4.9 | None | SRR1180399 | Sensitive | lineage4.9 | None | ERR502470 | RR-TB | lineage4.9 | None | ERR11465490 | Sensitive | lineage4.1.2.1 | None | ERR4815815 | Sensitive | lineage4.9 | None | SRR1180355 | Sensitive | lineage4.9 | None | ERR4815471 | Sensitive | lineage4.9 | None | SRR1180410 | Sensitive | lineage4.9 | None | ERR4796577 | HR-TB | None | ERR4819314 | Other | lineage1.1.1 | None | SRR1180250 | Other | lineage4.9 | None | SRR1175052 | HR-TB | lineage4.9 | None | SRR1180406 | Sensitive | lineage4.9 | None | SRR6045359 | Sensitive | lineage4.9 | None | ERR4818646 | Sensitive | lineage4.1.2.1 | None | SRR1181403 | Other | lineage4.9 | None | ERR4769417 | Pre-XDR-TB | lineage4.9 | None | SRR1180300 | Sensitive | lineage4.9 | None | SAMEA3501073 | RR-TB | lineage4.8 | None | SRR1181237 | Sensitive | lineage2.2.1;lineage4 | None | ERR067712 | Sensitive | lineage4.9 | None | ERR323044 | HR-TB | lineage4.3.4.2.1 | None | ERR5987263 | MDR-TB | lineage2.2.1 | None | ERR6359069 | Sensitive | lineage4.9 | None | SRR10315558 | Sensitive | lineage2.2.1 | None | ERR4821276 | Sensitive | lineage3 | None | SRR11342636 | MDR-TB | lineage4.3.3;lineage4.9 | None | SRR11342687 | RR-TB | lineage4.2.2.2 | None | SRR11342649 | MDR-TB | lineage4.3.3 | None | SRR11342662 | MDR-TB | lineage4.8.1 | None | SRR11349147 | RR-TB | lineage4.3.2.1 | None | SRR11972425 | Pre-XDR-TB | lineage2.2.1 | None | ERR3439489 | RR-TB | La1.8.1 | None | SRR11342682 | Other | lineage4.1.2 | None | ERR978767 | RR-TB | lineage4.8 | None | ERR4596910 | Sensitive | lineage4.9 | None | ERR6358951 | Sensitive | lineage4.9 | None | ERR978767_ERR978765_ERR978766 | RR-TB | lineage4.8 | None | ERR4818624 | Other | lineage4.3.4.2.1 | None | SRR9971080 | RR-TB | lineage2.2.1 | None | SRR1180413 | Sensitive | lineage4.9 | None | ERR736831 | Other | lineage4.9 | None | SRR7755756 | Pre-XDR-TB | lineage4.3.3 | None | ERR4818851 | RR-TB | lineage4.4.1.1 | None | SRR7645858 | Pre-XDR-TB | lineage4.3.3 | None | ERR4798823 | HR-TB | None | ERR4817667 | HR-TB | lineage4.8 | None | ERR323108 | HR-TB | La1.7;lineage4.9 | None | ERR2229198 | Sensitive | lineage4.8 | None | ERR1063855 | Other | lineage4.9 | None | ERR4596902 | MDR-TB | lineage3 | None | SRR16156188 | Sensitive | lineage4.9 | None | ERR4814639 | HR-TB | lineage4.9 | None | ERR1063859 | HR-TB | La1.7.1;lineage4.9 | None | ERR323037 | Other | lineage4.9 | None | SRR11342642 | MDR-TB | lineage4.1.1.1 | None | SRR11342673 | RR-TB | lineage4.3.4.2 | None | SRR11342660 | MDR-TB | lineage2.2.1 | None | ERR9119733 | MDR-TB | lineage2.2.1 | None |
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