Rv0668 - c.1326T>C


Drug resistance types
58 Sensitive 33 RR-TB 74 HR-TB 49 MDR-TB 6 Pre-XDR-TB 2 XDR-TB 72 Other
lineage Counts
lineage Count
lineage4.9 71
lineage2.2.1 24
lineage3.1.3 1
lineage4.1.1.3;lineage4.9 1
lineage4.4.1.1 4
lineage4.8 14
lineage4.3.2 2
lineage2.1;lineage4.9;lineage6.3 2
4
M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 1
La3;M.canetti;lineage4.9 2
M.canetti;lineage2.1;lineage4.9 21
La3;M.canetti;lineage2.1;lineage4.9 12
lineage3 11
La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9 1
M.canetti;lineage2.1;lineage4 1
La3;M.canetti;lineage2.1;lineage3.1 1
La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 4
lineage4.9;lineage7 4
lineage2.2;lineage4 1
lineage4.1.2.1 2
La1.6;La3;lineage4.9 2
lineage1.1.1 3
lineage1.1 1
lineage4.3.4.2.1 3
lineage4.6.2.2 2
La1.3 2
M.canetti;lineage2.1;lineage4.9;lineage6.3 5
La1.8.1 5
lineage4.9.1 2
lineage4.1.2.1.1 1
lineage4.6.1.1 6
lineage4.6.1.2 3
lineage2.2.2 5
lineage2.2 1
lineage4.2.2.2 1
lineage4.3.3 4
lineage4.3.2.1 3
lineage4.5 1
lineage1.2.1.2.1 1
lineage4.1.2 2
lineage5.2 2
lineage4 1
lineage2.2.1.1 1
lineage4.4.2 1
lineage4.1 1
M.canetti;lineage2.1;lineage4.1.4;lineage4.3.1;lineage4.9 1
La1.6;La3;lineage4.6.4;lineage4.8.1;lineage4.9 1
La3;M.canetti;lineage3.1 1
M.canetti;lineage4.9 3
La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 2
lineage4.1.1.3 2
lineage2.1;lineage4.9 3
M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 1
M.canetti;lineage2.2 1
M.canetti;lineage4.3.1;lineage4.9 1
lineage6.1.3 1
La1.6;La3;M.canetti;lineage2.1;lineage4.9 1
lineage1.1.2 2
lineage2.1;lineage4.9;lineage6.3;lineage8 1
lineage4.2.1 1
M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 1
M.canetti;lineage2.1;lineage4.3.1;lineage4.9 1
M.canetti;lineage2.1 1
La1.7;M.canetti;lineage4.9 1
lineage2.1;lineage4.9;lineage7 1
M.canetti;lineage4.1.1.3;lineage6.3;lineage8 1
lineage3.1.1 1
lineage2.2.1;lineage4.9 1
lineage4.4.1.2 2
La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 4
M.canetti;lineage2.1;lineage4.9;lineage6.3;lineage8 1
La3;M.canetti;lineage4.8;lineage4.9 1
M.canetti;lineage2.1;lineage4.1.4;lineage4.9 2
La1.6;La3;M.canetti;lineage4.6.4;lineage4.9 1
La1.6;La3;M.canetti;lineage4.8.1;lineage4.9 1
La3;M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 1
La1.6;La3;lineage4.6.4;lineage4.9 1
lineage2.2.2;lineage4 1
lineage2.1;lineage4.1.4;lineage4.9 1
La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 1
lineage4.6.3 1
La1.7.1 1
lineage4.4.1.1.1 1
M.canetti;lineage2.1;lineage3 1
spoligotype Counts
spoligotype Count
None 294
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR1140586 Sensitive lineage4.9 None
SRR1140724 Other lineage2.2.1 None
SRR18913742 Sensitive lineage3.1.3 None
SRR6045555 Other lineage4.9 None
SRR6131515 Sensitive lineage4.1.1.3;lineage4.9 None
SRR1173453 Other lineage4.4.1.1 None
SRR16156804 Sensitive lineage4.9 None
SRR19303779 Sensitive lineage4.8 None
SRR29053386 Sensitive lineage4.3.2 None
SRR23961558 Other lineage2.1;lineage4.9;lineage6.3 None
SRR18289200 Other lineage4.9 None
ERR4796577 HR-TB None
SRR1049674 HR-TB lineage2.2.1 None
SRR3675323 Sensitive lineage4.9 None
ERR11252599 Other M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 None
ERR2693229 RR-TB La3;M.canetti;lineage4.9 None
ERR1035239 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR323063 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR3675507 Other lineage4.9 None
ERR387051 Other lineage4.9 None
ERR4815079 RR-TB lineage3 None
ERR3797044 Other La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9 None
SRR1180440 Other lineage4.9 None
ERR2693239 RR-TB M.canetti;lineage2.1;lineage4 None
SRR3675482 Other lineage4.9 None
ERR5311081 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR1062919 HR-TB lineage2.2.1 None
ERR323034 MDR-TB La3;M.canetti;lineage2.1;lineage3.1 None
ERR2693245 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
ERR5162090 RR-TB lineage4.9 None
ERR5311101 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR4820773 HR-TB lineage4.9 None
ERR323036 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR3675231 MDR-TB lineage4.9;lineage7 None
ERR126608 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR1182954 Other lineage4.9 None
SRR3618864 Pre-XDR-TB lineage2.2.1 None
SRR16156832 RR-TB lineage2.2;lineage4 None
ERR2229198 Sensitive lineage4.8 None
ERR2027233 Sensitive lineage4.1.2.1 None
ERR2513405 Other lineage2.2.1 None
ERR2693254 Other La1.6;La3;lineage4.9 None
ERR1023494 Sensitive lineage3 None
ERR4817554 Other lineage1.1.1 None
SRR6046133 HR-TB lineage4.9 None
ERR3077978 Other lineage1.1 None
SRR7131160 Sensitive lineage3 None
ERR323044 HR-TB lineage4.3.4.2.1 None
ERR3801503 Sensitive lineage4.6.2.2 None
ERR4769423 Other La1.3 None
ERR5311078 MDR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR4797201 Other None
ERR3797023 HR-TB La1.8.1 None
ERR245758 Other lineage4.9.1 None
ERR4821053 Other lineage3 None
SRR22424787 Sensitive lineage4.9 None
ERR772255 MDR-TB lineage4.3.2 None
ERR4872269 XDR-TB lineage2.2.1 None
ERR5987263 MDR-TB lineage2.2.1 None
ERR760733 MDR-TB lineage4.1.2.1.1 None
SRR1062937 Sensitive lineage4.6.1.1 None
SRR10315567 Other lineage2.2.1 None
ERR3797043 Sensitive lineage4.9 None
SAMN02381051 RR-TB lineage4.6.1.2 None
SAMN02381047 Sensitive lineage4.6.1.1 None
ERR4796351 Sensitive lineage4.9 None
ERR4814639 HR-TB lineage4.9 None
SRR6044942 HR-TB lineage4.9 None
ERR9992784 XDR-TB lineage2.2.2 None
ERR8976043 HR-TB lineage2.2 None
SRR11342634 MDR-TB lineage4.8 None
SRR11342687 RR-TB lineage4.2.2.2 None
SRR3675561 Other M.canetti;lineage2.1;lineage4.9 None
SRR11462861 Other La1.8.1 None
SRR11342667 MDR-TB lineage4.3.3 None
SRR11349147 RR-TB lineage4.3.2.1 None
SAMN02599089 MDR-TB lineage3 None
ERR2229143 RR-TB lineage4.9 None
ERR3283021 HR-TB lineage4.9 None
SRR13423544 Other lineage4.5 None
SRR3675515 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR3283032 Other lineage4.9 None
ERR2693230 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
SRR1510066 Other lineage1.2.1.2.1 None
SRR069981 HR-TB lineage2.2.2 None
SRR11342682 Other lineage4.1.2 None
ERR4819877 HR-TB lineage4.9 None
ERR9119733 MDR-TB lineage2.2.1 None
ERR978767 RR-TB lineage4.8 None
ERR9119500 MDR-TB lineage5.2 None
SRR6045948 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR4816478 HR-TB lineage4 None
SRR1791696 Other La1.8.1 None
ERR5311077 Other La1.8.1 None
SRR14066533 Sensitive lineage1.1.1 None
ERR4769493 Other lineage4.9 None
ERR978766 RR-TB lineage4.8 None
SRR18909918 Other lineage2.2.1.1 None
SRR20969542 Other lineage4.4.2 None
ERR3797062 RR-TB lineage4.9 None
SRR6046382 Sensitive lineage2.2.1 None
ERR4819546 HR-TB lineage3 None
SRR6046594 Sensitive lineage4.9 None
ERR4816656 Other lineage4.9 None
SRR3105762 Sensitive lineage4.1 None
SRR9971114 Other lineage2.2.1 None
SRR069989 HR-TB lineage2.2.2 None
SRR7240033 Other La1.8.1 None
SRR9971122 MDR-TB lineage4.8 None
SRR9970980 Other lineage4.1.2 None
SRR16156697 RR-TB lineage2.2.1 None
SRR1183686 Sensitive lineage4.9 None
SRR3675456 RR-TB lineage4.9;lineage7 None
ERR3283017 MDR-TB M.canetti;lineage2.1;lineage4.1.4;lineage4.3.1;lineage4.9 None
SRR11972367 Sensitive lineage2.2.1 None
SRR3675234 Other La1.6;La3;lineage4.6.4;lineage4.8.1;lineage4.9 None
SRR28868381 Other lineage4.9 None
ERR3283018 HR-TB lineage4.9 None
ERR323033 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR3675312 Sensitive lineage4.9 None
ERR1873393 HR-TB M.canetti;lineage2.1;lineage4.9 None
SRR6046485 Other lineage4.9 None
ERR3283006 RR-TB lineage4.9 None
ERR323054 MDR-TB La3;M.canetti;lineage3.1 None
ERR323038 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR3675554 HR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR124652 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR3675539 HR-TB lineage4.9;lineage7 None
SRR3675487 Other M.canetti;lineage4.9 None
ERR323047 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR4819422 HR-TB lineage4.9 None
SRR1049752 RR-TB lineage4.6.1.2 None
SRR3675444 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR323060 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR6358837 HR-TB La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
ERR3797016 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR4819314 Other lineage1.1.1 None
ERR4819241 Other lineage4.9 None
ERR4188342 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR3283046 Sensitive lineage4.9 None
SRR3675508 Other lineage2.1;lineage4.9;lineage6.3 None
ERR3468607 Other lineage4.9 None
SRR6131528 Sensitive lineage4.1.1.3 None
SRR1049675 HR-TB lineage2.2.1 None
SRR3742667 Sensitive lineage4.9 None
SRR1181403 Other lineage4.9 None
ERR978765 RR-TB lineage4.8 None
SAMN02381005 Sensitive lineage4.6.1.1 None
ERR773806 Sensitive lineage2.2.1 None
SRR6046514 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR4798823 HR-TB None
ERR294248 MDR-TB lineage2.1;lineage4.9 None
SRR17567930 Sensitive lineage4.4.1.1 None
ERR5311100 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SAMEA3501073 RR-TB lineage4.8 None
ERR4817667 HR-TB lineage4.8 None
ERR124642 MDR-TB M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 None
ERR3797061 Other La1.6;La3;lineage4.9 None
ERR067712 Sensitive lineage4.9 None
ERR108125 RR-TB lineage4.9 None
ERR1873396 Pre-XDR-TB M.canetti;lineage2.2 None
ERR1199132 Sensitive lineage4.6.1.1 None
ERR4818561 Sensitive lineage4.9 None
ERR4769433 RR-TB lineage4.9 None
ERR161033 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR4829238 Sensitive lineage3 None
ERR9119138 RR-TB M.canetti;lineage4.3.1;lineage4.9 None
ERR9786444 Sensitive lineage4.8 None
ERR9787153 Other lineage6.1.3 None
ERR9786711 Sensitive lineage4.6.2.2 None
ERR3283020 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.9 None
SRR1173037 Sensitive lineage1.1.2 None
SAMN02380982 MDR-TB lineage4.3.4.2.1 None
SRR3675481 MDR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR3675280 RR-TB lineage4.9 None
ERR4815441 HR-TB lineage4.9 None
SRR3675464 HR-TB lineage2.1;lineage4.9;lineage6.3;lineage8 None
ERR4818583 Other lineage4.3.3 None
SRR1062867 Sensitive lineage4.9 None
SRR14782539 MDR-TB lineage4.2.1 None
ERR4188350 HR-TB M.canetti;lineage2.1;lineage4.9 None
SRR3675518 MDR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
SRR1173767 MDR-TB lineage4.4.1.1 None
ERR978767_ERR978765_ERR978766 RR-TB lineage4.8 None
SRR19303806 Sensitive lineage4.1.2.1 None
SRR3619841 Pre-XDR-TB lineage2.2.1 None
ERR5311099 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR1062865 Sensitive lineage2.2.2 None
SRR6458421 MDR-TB lineage2.2.1 None
SRR9971065 RR-TB lineage2.2.1 None
SRR9971046 MDR-TB lineage4.8 None
SRR9971112 Other lineage2.2.1 None
ERR4831117 HR-TB lineage4.9;lineage7 None
SRR1106670 Sensitive lineage4.9 None
SRR3675494 RR-TB lineage4.9 None
ERR13432057 Other lineage4.3.3 None
SRR3675320 MDR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9 None
ERR5311090 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR323041 HR-TB M.canetti;lineage2.1 None
ERR4811493 HR-TB lineage4.9 None
ERR234659 Other None
ERR473314 HR-TB M.canetti;lineage2.1;lineage4.9 None
SRR1049735 Sensitive lineage4.9 None
SRR1181256 Other lineage4.9 None
ERR736835 HR-TB La1.7;M.canetti;lineage4.9 None
SRR3675243 Other lineage4.9 None
SRR3675555 HR-TB lineage2.1;lineage4.9;lineage7 None
SRR3675558 HR-TB M.canetti;lineage4.1.1.3;lineage6.3;lineage8 None
SRR1173310 Other lineage3.1.1 None
SRR12708406 HR-TB lineage2.2.1;lineage4.9 None
SRR17567887 Sensitive lineage4.4.1.2 None
SRR3675545 Other La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR3675568 HR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3;lineage8 None
ERR5311098 HR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR038268 HR-TB La3;M.canetti;lineage4.8;lineage4.9 None
ERR3283042 Other lineage4.9 None
ERR4816762 Sensitive lineage4.9 None
ERR176658 HR-TB M.canetti;lineage2.1;lineage4.9 None
SRR3675322 HR-TB M.canetti;lineage2.1;lineage4.1.4;lineage4.9 None
ERR4818929 HR-TB lineage4.9 None
ERR3283024 Other La1.6;La3;M.canetti;lineage4.6.4;lineage4.9 None
ERR2693257 Other La1.6;La3;M.canetti;lineage4.8.1;lineage4.9 None
SRR069978 HR-TB lineage2.2.2 None
SRR1013527 Other lineage2.2.1 None
ERR323058 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR3675506 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR5311083 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR124651 MDR-TB La3;M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 None
ERR3797017 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
ERR473277 HR-TB La3;M.canetti;lineage4.9 None
SRR3675284 Sensitive lineage4.9 None
SRR3675495 Other lineage2.1;lineage4.9 None
ERR3797028 HR-TB M.canetti;lineage4.9 None
ERR11465833 Sensitive lineage4.3.2.1 None
ERR2693231 Other La1.6;La3;lineage4.6.4;lineage4.9 None
SRR3675269 RR-TB lineage4.9 None
ERR323040 HR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR1013528 Pre-XDR-TB lineage2.2.2;lineage4 None
ERR037504 Other lineage4.9.1 None
ERR867567 RR-TB lineage3 None
ERR126597 HR-TB lineage4.4.1.2 None
ERR2514327 HR-TB lineage4.8 None
ERR2517457 Sensitive lineage3 None
ERR3468544 Other lineage2.1;lineage4.9 None
ERR323064 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR6045219 HR-TB lineage4.9 None
ERR4596902 MDR-TB lineage3 None
ERR4769436 Other La1.3 None
ERR3283016 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR3675582 Other lineage4.9 None
SRR16157123 Other lineage4.9 None
ERR3797036 HR-TB lineage2.1;lineage4.1.4;lineage4.9 None
SRR1183181 Sensitive lineage4.9 None
SRR6046644 HR-TB La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 None
ERR5311082 MDR-TB M.canetti;lineage2.1;lineage4.1.4;lineage4.9 None
ERR4872094 MDR-TB lineage5.2 None
ERR987765 Sensitive lineage4.6.1.1 None
SRR1141261 Sensitive lineage4.9 None
SRR11349133 MDR-TB lineage4.3.3 None
SAMN02599088 Sensitive lineage1.1.2 None
ERR2446413 Sensitive lineage4.6.3 None
SRR11972425 Pre-XDR-TB lineage2.2.1 None
SRR19303813 Sensitive lineage4.8 None
ERR126618 MDR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR4817731 HR-TB lineage4.9 None
SRR5709926 MDR-TB lineage2.2.1 None
SRR17567917 RR-TB lineage4.4.1.1 None
SRR9971333 MDR-TB lineage4.1.1.3 None
ERR3797047 MDR-TB lineage4.9 None
SRR7240492 HR-TB La1.7.1 None
SRR1180446 Other lineage4.9 None
SRR9971026 Sensitive lineage4.4.1.1.1 None
SRR5709967 MDR-TB lineage2.2.1 None
SRR9971113 Other lineage2.2.1 None
SRR3675450 HR-TB La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
SRR9970981 RR-TB lineage4.3.2.1 None
ERR323055 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR5341365 Pre-XDR-TB lineage3 None
ERR3797065 RR-TB lineage4.9 None
ERR5311096 HR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR5311102 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR1062895 Sensitive lineage4.6.1.1 None
SRR21732954 Sensitive lineage4.9 None
ERR502470 RR-TB lineage4.9 None
SRR1062871 RR-TB lineage4.3.4.2.1 None
SRR6045233 Other M.canetti;lineage4.9 None
ERR3797014 Other La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
SRR1180831 Other lineage4.9 None
ERR4814536 MDR-TB M.canetti;lineage2.1;lineage3 None
SRR3675383 Sensitive lineage4.9 None
ERR126600 HR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR323035 Sensitive lineage4.9 None
SRR1049751 RR-TB lineage4.6.1.2 None
SRR6044815 Other lineage4.9 None