Rv0668 - c.1326T>C


Drug resistance types
54 Sensitive 52 RR-TB 48 HR-TB 89 MDR-TB 5 Pre-XDR-TB 2 XDR-TB 44 Other
lineage Counts
lineage Count
lineage4.9 68
lineage1.1.1 3
lineage3 14
M.canetti;lineage2.1;lineage4.9 21
lineage4.1.2 2
M.canetti;lineage2.2 1
lineage2.2.1;lineage4.9 1
lineage4.3.3 7
La3;M.canetti;lineage2.1;lineage4.9 12
La1.6;La3;lineage4.6.4;lineage4.8.1;lineage4.9 1
La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 4
La1.6;La3;lineage4.9 2
lineage2.2.1 24
M.canetti;lineage2.1;lineage4.9;lineage6.3 5
La1.2;La1.8.1 1
lineage4.8 13
La3;M.canetti;lineage4.8;lineage4.9 1
lineage2.1;lineage4.9;lineage6.3 2
M.canetti;lineage4.3.1;lineage4.9 1
lineage2.1;lineage4.1.4;lineage4.9 1
lineage4.3.4.2.1 3
lineage4.3.2.1 3
lineage5.2 2
lineage4.1.1.3 2
lineage2.2.2 5
La1.3 2
La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 2
lineage2.1;lineage4.9 3
lineage4 2
lineage4.6.2.2 2
lineage4.1.1.3;lineage4.9 1
La1.6;La3;M.canetti;lineage4.8.1;lineage4.9 1
lineage2.1;lineage4.3.2 1
lineage4.9;lineage7 4
M.canetti;lineage2.1 1
lineage4.9.1 2
lineage1.2.1.2.1 1
La1.7.1 1
M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 1
La3;M.canetti;lineage4.9 2
lineage4.4.1.1 4
La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9 1
La3;M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 1
M.canetti;lineage4.1.1.3;lineage6.3;lineage8 1
lineage4.6.1.1 6
M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 1
lineage4.2.2.2 1
lineage2.2;lineage4 1
lineage4.6.1.2 3
lineage4.2.1 1
La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 1
lineage1.1.2 2
lineage4.4.2 1
La1.6;La3;M.canetti;lineage2.1;lineage4.9 1
M.canetti;lineage2.1;lineage4.1.4;lineage4.9 2
lineage4.6.3 1
La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 4
lineage4.5 1
lineage4.1.2.1.1 1
M.canetti;lineage4.9 3
lineage1.2.2.2 1
M.canetti;lineage2.1;lineage4.3.1;lineage4.9 1
lineage1.1 1
lineage2.1;lineage4.9;lineage6.3;lineage8 1
lineage4.1.2.1 2
M.canetti;lineage2.1;lineage4.9;lineage6.3;lineage8 1
2
lineage2.1;lineage4.9;lineage7 1
lineage2.1;lineage2.2;lineage6.3 1
La3;M.canetti;lineage2.1;lineage3.1 1
lineage4.4.1.2 2
lineage3.1.3 1
La1.8.1 4
La1.6;La3;lineage4.6.4;lineage4.9 1
La1.6;La3;M.canetti;lineage4.6.4;lineage4.9 1
lineage4.4.1.1.1 1
M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 1
lineage6.1.3 1
M.canetti;lineage2.1;lineage4.1.4;lineage4.3.1;lineage4.9 1
lineage3.1.1 1
La3;M.canetti;lineage3.1 1
M.canetti;lineage2.1;lineage3 1
La1.7;M.canetti;lineage4.9 1
M.canetti;lineage2.1;lineage4 1
lineage4.1 1
lineage2.2.1.1 1
spoligotype Counts
spoligotype Count
None 294
Geographic prevalence
Country level data for this variant is available for 6 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR6044942 HR-TB lineage4.9 None
ERR4819314 HR-TB lineage1.1.1 None
SRR3675269 RR-TB lineage4.9 None
ERR323035 Sensitive lineage4.9 None
ERR3275548 Sensitive lineage3 nl
ERR067712 Sensitive lineage4.9 None
SRR3675444 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR11342682 Other lineage4.1.2 None
ERR1873396 Pre-XDR-TB M.canetti;lineage2.2 None
SRR12708406 HR-TB lineage2.2.1;lineage4.9 None
ERR9119101 Sensitive lineage4.3.3 None
ERR323047 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR3742667 Sensitive lineage4.9 None
SRR3675234 HR-TB La1.6;La3;lineage4.6.4;lineage4.8.1;lineage4.9 None
ERR4818561 Sensitive lineage4.9 None
ERR3283016 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR6046133 HR-TB lineage4.9 None
ERR3797014 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
ERR176658 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR2693254 Other La1.6;La3;lineage4.9 None
SRR1049674 HR-TB lineage2.2.1 None
ERR5311078 MDR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR7240033 Other La1.2;La1.8.1 None
ERR4817628 Sensitive lineage4.8 gb
ERR038268 MDR-TB La3;M.canetti;lineage4.8;lineage4.9 None
ERR161033 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR23961558 RR-TB lineage2.1;lineage4.9;lineage6.3 None
ERR9119138 RR-TB M.canetti;lineage4.3.1;lineage4.9 None
SRR3675582 Other lineage4.9 None
ERR3797036 HR-TB lineage2.1;lineage4.1.4;lineage4.9 None
ERR5311096 MDR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SAMN02380982 MDR-TB lineage4.3.4.2.1 None
SRR9970981 RR-TB lineage4.3.2.1 None
ERR323058 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR6046382 RR-TB lineage2.2.1 None
ERR4872094 MDR-TB lineage5.2 None
SRR9971333 MDR-TB lineage4.1.1.3 None
ERR323036 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR6458421 MDR-TB lineage2.2.1 None
SRR069989 HR-TB lineage2.2.2 None
ERR4769436 Other La1.3 None
ERR2693230 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
ERR6358837 MDR-TB La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
ERR3468544 RR-TB lineage2.1;lineage4.9 None
ERR4816478 HR-TB lineage4 None
SRR9971112 HR-TB lineage2.2.1 None
ERR3801503 Other lineage4.6.2.2 None
SRR3618864 Pre-XDR-TB lineage2.2.1 None
SRR6131515 Sensitive lineage4.1.1.3;lineage4.9 None
SRR14066533 RR-TB lineage1.1.1 None
ERR3797062 RR-TB lineage4.9 None
SRR6044815 RR-TB lineage4.9 None
ERR4816656 Other lineage4.9 None
ERR2693257 HR-TB La1.6;La3;M.canetti;lineage4.8.1;lineage4.9 None
SRR3619841 Pre-XDR-TB lineage2.2.1 None
ERR4829238 Sensitive lineage3 None
SRR9971065 RR-TB lineage2.2.1 None
ERR323055 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR1062865 Sensitive lineage2.2.2 None
ERR11465833 Sensitive lineage4.3.2.1 None
ERR772255 MDR-TB lineage2.1;lineage4.3.2 None
ERR4831117 HR-TB lineage4.9;lineage7 None
SRR1106670 Sensitive lineage4.9 None
ERR323041 MDR-TB M.canetti;lineage2.1 None
SRR11349133 MDR-TB lineage4.3.3 None
SRR1013527 Other lineage2.2.1 None
ERR9786711 Other lineage4.6.2.2 None
ERR3468607 RR-TB lineage4.9 None
ERR037504 Other lineage4.9.1 None
ERR4188350 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR1510066 RR-TB lineage1.2.1.2.1 None
SRR1062919 HR-TB lineage2.2.1 None
SRR3675508 MDR-TB lineage2.1;lineage4.9;lineage6.3 None
ERR4819422 HR-TB lineage4.9 None
ERR3275196 RR-TB lineage2.2.1 nl
SRR7240492 MDR-TB La1.7.1 None
SRR6046594 Other lineage4.9 None
ERR3283006 RR-TB lineage4.9 None
ERR4811493 HR-TB lineage4.9 None
SRR3675554 MDR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR3675383 Sensitive lineage4.9 None
ERR11252599 Other M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 None
ERR4188342 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR2693229 RR-TB La3;M.canetti;lineage4.9 None
ERR1035239 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR9971114 Other lineage2.2.1 None
ERR2514327 HR-TB lineage4.8 None
SRR17567917 RR-TB lineage4.4.1.1 None
SRR1183181 Sensitive lineage4.9 None
ERR3797044 Other La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9 None
SRR6046514 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR2446544 Sensitive lineage3 nl
SRR16156697 RR-TB lineage2.2.1 None
ERR5311081 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR245758 Other lineage4.9.1 None
ERR2693245 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
ERR5162090 RR-TB lineage4.9 None
ERR124651 MDR-TB La3;M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 None
SRR11972425 Pre-XDR-TB lineage2.2.1 None
SRR9970980 HR-TB lineage4.1.2 None
ERR4821053 RR-TB lineage3 None
ERR473277 HR-TB La3;M.canetti;lineage4.9 None
ERR3283046 Sensitive lineage4.9 None
ERR5311101 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR3675558 MDR-TB M.canetti;lineage4.1.1.3;lineage6.3;lineage8 None
SRR3675482 RR-TB lineage4.9 None
SAMEA3501073 RR-TB lineage4.8 None
SAMN02381005 Sensitive lineage4.6.1.1 None
ERR124642 MDR-TB M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 None
SRR3675561 RR-TB M.canetti;lineage2.1;lineage4.9 None
ERR5311098 MDR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR11342687 RR-TB lineage4.2.2.2 None
ERR4769433 RR-TB lineage4.9 None
ERR4596902 MDR-TB lineage3 None
SRR3675231 MDR-TB lineage4.9;lineage7 None
SRR1062937 Sensitive lineage4.6.1.1 None
ERR4769423 Other La1.3 None
SRR16156832 RR-TB lineage2.2;lineage4 None
SAMN02381051 RR-TB lineage4.6.1.2 None
SRR5341365 Pre-XDR-TB lineage3 None
SRR14782539 MDR-TB lineage4.2.1 None
SRR3675312 Sensitive lineage4.9 None
SRR6046644 MDR-TB La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 None
SRR1173037 Sensitive lineage1.1.2 None
ERR323060 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR2229198 Sensitive lineage4.8 None
SRR20969542 Other lineage4.4.2 None
SAMN02599088 Sensitive lineage1.1.2 None
ERR323064 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR6045219 HR-TB lineage4.9 None
SRR1049751 RR-TB lineage4.6.1.2 None
SRR10315567 HR-TB lineage2.2.1 None
SRR1062895 Sensitive lineage4.6.1.1 None
ERR3283020 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.9 None
ERR4818583 Other lineage4.3.3 None
ERR4796351 Sensitive lineage4.9 None
ERR5311082 MDR-TB M.canetti;lineage2.1;lineage4.1.4;lineage4.9 None
ERR4814639 HR-TB lineage4.9 None
SRR1141261 Sensitive lineage4.9 None
ERR2446413 Sensitive lineage4.6.3 None
ERR2229143 RR-TB lineage4.9 None
ERR4815079 RR-TB lineage3 None
ERR126600 MDR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR978767 RR-TB lineage4.8 None
SRR6045948 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR4817731 HR-TB lineage4.9 None
ERR2517457 Sensitive lineage3 None
SRR13423544 Other lineage4.5 None
ERR760733 MDR-TB lineage4.1.2.1.1 None
ERR3797028 HR-TB M.canetti;lineage4.9 None
ERR978766 RR-TB lineage4.8 None
ERR867567 RR-TB lineage3 None
SRR1173767 MDR-TB lineage4.4.1.1 None
ERR978767_ERR978765_ERR978766 RR-TB lineage4.8 None
ERR1023494 Sensitive lineage3 None
ERR4819546 HR-TB lineage3 None
SRR1049735 Sensitive lineage4.9 None
SRR19303779 Sensitive lineage4.8 None
SRR9971046 MDR-TB lineage4.8 None
SRR3675450 MDR-TB La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
SRR3675456 RR-TB lineage4.9;lineage7 None
ERR4797201 Other lineage1.2.2.2 None
SRR11349147 RR-TB lineage4.3.2.1 None
ERR126608 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR3675515 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR1180446 Other lineage4.9 None
SRR3675320 MDR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9 None
ERR3283018 HR-TB lineage4.9 None
ERR323033 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR3077978 RR-TB lineage1.1 None
ERR4819241 Other lineage4.9 None
SRR6046485 Other lineage4.9 None
SRR6045233 Other M.canetti;lineage4.9 None
SRR3675464 MDR-TB lineage2.1;lineage4.9;lineage6.3;lineage8 None
SRR1180831 Other lineage4.9 None
ERR2027233 Sensitive lineage4.1.2.1 None
ERR323038 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR3675568 MDR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3;lineage8 None
SRR18289200 Other lineage4.9 None
ERR4796577 HR-TB None
ERR234659 HR-TB None
ERR323040 MDR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR1199132 Sensitive lineage4.6.1.1 None
SRR6131528 Sensitive lineage4.1.1.3 None
SRR1049675 HR-TB lineage2.2.1 None
SRR3675555 MDR-TB lineage2.1;lineage4.9;lineage7 None
SRR3675507 RR-TB lineage4.9 None
ERR8976043 MDR-TB lineage2.1;lineage2.2;lineage6.3 None
ERR4769493 Other lineage4.9 None
ERR773806 Sensitive lineage2.2.1 None
ERR4821179 Other lineage4.1.2.1 gb
SRR1180440 Other lineage4.9 None
SRR1173453 Other lineage4.4.1.1 None
SRR1181256 Other lineage4.9 None
ERR294248 MDR-TB lineage2.1;lineage4.9 None
SRR3675322 MDR-TB M.canetti;lineage2.1;lineage4.1.4;lineage4.9 None
ERR323034 MDR-TB La3;M.canetti;lineage2.1;lineage3.1 None
ERR124652 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR3797017 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
ERR5311100 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR17567887 Sensitive lineage4.4.1.2 None
ERR323063 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR387051 RR-TB lineage4.9 None
ERR3797061 Other La1.6;La3;lineage4.9 None
SRR3675487 MDR-TB M.canetti;lineage4.9 None
SRR18913742 Sensitive lineage3.1.3 None
SRR1182954 Other lineage4.9 None
SRR1791696 RR-TB La1.8.1 None
ERR2693231 HR-TB La1.6;La3;lineage4.6.4;lineage4.9 None
ERR3283024 HR-TB La1.6;La3;M.canetti;lineage4.6.4;lineage4.9 None
SRR6045555 Other lineage4.9 None
SRR3675545 RR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR2513405 Other lineage2.2.1 None
ERR3797016 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR3275709 HR-TB lineage3 nl
ERR4816762 Sensitive lineage4.9 None
SRR3675506 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR5908229 Sensitive lineage4.3.3 None
SRR7131160 Sensitive lineage3 None
ERR3797023 MDR-TB La1.8.1 None
SRR3675495 RR-TB lineage2.1;lineage4.9 None
SRR3675284 Sensitive lineage4.9 None
ERR4872269 XDR-TB lineage2.2.1 None
ERR978765 RR-TB lineage4.8 None
ERR4798823 HR-TB lineage4 None
SRR22424787 Sensitive lineage4.9 None
SAMN02599089 MDR-TB lineage3 None
ERR9119733 MDR-TB lineage2.2.1 None
SRR9971026 Sensitive lineage4.4.1.1.1 None
ERR3283032 Other lineage4.9 None
ERR987765 Sensitive lineage4.6.1.1 None
ERR1873393 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR3797043 Sensitive lineage4.9 None
SRR3675481 MDR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR3675280 RR-TB lineage4.9 None
ERR4815441 HR-TB lineage4.9 None
SRR5709967 MDR-TB lineage2.2.1 None
ERR5311077 Other La1.8.1 None
SRR11342667 MDR-TB lineage4.3.3 None
SRR069981 HR-TB lineage2.2.2 None
ERR4819877 HR-TB lineage4.9 None
ERR126618 MDR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR3675518 MDR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
ERR3283042 HR-TB lineage4.9 None
ERR5311099 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR126597 HR-TB lineage4.4.1.2 None
ERR3797047 MDR-TB lineage4.9 None
SRR1140586 Sensitive lineage4.9 None
ERR4817554 Other lineage1.1.1 None
ERR9119500 MDR-TB lineage5.2 None
SRR1183686 Sensitive lineage4.9 None
SRR3675494 RR-TB lineage4.9 None
ERR9787153 Other lineage6.1.3 None
ERR5311102 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR3283017 MDR-TB M.canetti;lineage2.1;lineage4.1.4;lineage4.3.1;lineage4.9 None
SRR21732954 Sensitive lineage4.9 None
SRR11972367 Sensitive lineage2.2.1 None
ERR502470 RR-TB lineage4.9 None
SRR1173310 Other lineage3.1.1 None
SRR9971122 MDR-TB lineage4.8 None
ERR323044 HR-TB lineage4.3.4.2.1 None
SRR3675323 Sensitive lineage4.9 None
ERR5908228 RR-TB lineage4.3.3 None
SRR17567930 Sensitive lineage4.4.1.1 None
SRR3675243 MDR-TB lineage4.9 None
SRR1062871 RR-TB lineage4.3.4.2.1 None
ERR5311083 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR5709926 MDR-TB lineage2.2.1 None
ERR5311090 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR5987263 MDR-TB lineage2.2.1 None
ERR473314 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR3283021 MDR-TB lineage4.9 None
ERR323054 MDR-TB La3;M.canetti;lineage3.1 None
ERR4814536 MDR-TB M.canetti;lineage2.1;lineage3 None
ERR9992784 XDR-TB lineage2.2.2 None
ERR9119096 RR-TB lineage4.3.3 None
SAMN02381047 Sensitive lineage4.6.1.1 None
ERR108125 RR-TB lineage4.9 None
SRR1049752 RR-TB lineage4.6.1.2 None
ERR9786444 Sensitive lineage4.8 None
ERR736835 HR-TB La1.7;M.canetti;lineage4.9 None
SRR1181403 Other lineage4.9 None
SRR069978 HR-TB lineage2.2.2 None
SRR3675539 MDR-TB lineage4.9;lineage7 None
ERR2693239 RR-TB M.canetti;lineage2.1;lineage4 None
ERR4818929 HR-TB lineage4.9 None
ERR3797065 RR-TB lineage4.9 None
SRR11462861 Other La1.8.1 None
SRR16156804 Sensitive lineage4.9 None
ERR4820773 HR-TB lineage4.9 None
SRR1140724 Other lineage2.2.1 None
ERR4817667 HR-TB lineage4.8 None
SRR3105762 Sensitive lineage4.1 None
SRR18909918 Other lineage2.2.1.1 None