Rv0668 - c.1326T>C
Drug resistance types
64 Sensitive
27 RR-TB
79 HR-TB
54 MDR-TB
14 Pre-XDR-TB
1 XDR-TB
80 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage3 | 25 |
| lineage4.8 | 14 |
| 56 | |
| lineage4.1.1.3 | 1 |
| lineage4.1.2 | 1 |
| lineage4.3.2.1 | 3 |
| lineage4.4.1.1.1 | 1 |
| lineage2.2.1 | 32 |
| lineage4.3.4.2.1 | 5 |
| lineage4.9 | 45 |
| lineage4 | 10 |
| lineage3.1 | 2 |
| lineage4.6.1.1 | 5 |
| lineage4.4.1.2 | 2 |
| lineage4.1.2.1 | 7 |
| La1.8.1 | 20 |
| lineage4.6.2.2 | 3 |
| La1.3 | 3 |
| lineage1.1.2 | 16 |
| lineage4.9;La1.3 | 2 |
| lineage1.2.2.2 | 3 |
| lineage4.3.3 | 8 |
| lineage4.9.1 | 2 |
| lineage5.1.1 | 2 |
| lineage4.1.2.1.1 | 1 |
| lineage4.3.2 | 1 |
| lineage5.2 | 2 |
| lineage2.2.2 | 4 |
| lineage6.1.3 | 1 |
| lineage2 | 1 |
| lineage2.2 | 2 |
| lineage4.4.1.1 | 8 |
| lineage4.9;lineage2.2.1 | 2 |
| lineage4.6.1.2 | 3 |
| lineage4.4.1.1;lineage4.1.2.1 | 1 |
| lineage4.6.1 | 4 |
| lineage4.6.1;lineage3.1.1 | 1 |
| lineage4.5 | 1 |
| lineage1.1.1 | 3 |
| lineage1.2.1.2.1 | 1 |
| lineage4.2.1 | 1 |
| lineage2.2.2;lineage2.2.1 | 1 |
| lineage4.2.2.1 | 1 |
| lineage3.1.3 | 1 |
| lineage4.4.2;lineage4.2.2;lineage2.2.1 | 1 |
| lineage2.2.1.1 | 1 |
| lineage4.4.2 | 1 |
| lineage6.3;lineage4.9;lineage2.1 | 1 |
| lineage4.1 | 1 |
| lineage3;lineage2.1 | 1 |
| lineage4;lineage2 | 1 |
| lineage4.3.4.2 | 1 |
| lineage4.1.1 | 1 |
| lineage4.6.3 | 1 |
| lineage1.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 319 |
Geographic prevalence
Country level data for this variant is available for 7 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR7131160 | Sensitive | lineage3 | None | SRR7535080 | HR-TB | lineage4.8 | None | ERR323038 | HR-TB | None | SRR9971333 | MDR-TB | lineage4.1.1.3 | None | SRR9970980 | Other | lineage4.1.2 | None | SRR9970981 | RR-TB | lineage4.3.2.1 | None | SRR9971046 | MDR-TB | lineage4.8 | None | SRR9971026 | Sensitive | lineage4.4.1.1.1 | None | SRR9971122 | MDR-TB | lineage4.8 | None | SRR9971065 | RR-TB | lineage2.2.1 | None | SRR9971114 | Other | lineage2.2.1 | None | SRR9971112 | Other | lineage2.2.1 | None | ERR323055 | HR-TB | None | SRR9971113 | Other | lineage2.2.1 | None | ERR323044 | HR-TB | lineage4.3.4.2.1 | None | ERR323041 | HR-TB | None | ERR323048 | Pre-XDR-TB | lineage4.9 | None | ERR067712 | HR-TB | lineage4 | None | ERR323054 | HR-TB | lineage3.1 | None | ERR323063 | HR-TB | None | ERR1023494 | Sensitive | lineage3 | None | ERR11465833 | Sensitive | lineage4.3.2.1 | None | ERR10796565 | RR-TB | lineage4.9 | None | ERR108125 | Pre-XDR-TB | lineage4.9 | None | ERR1199132 | Sensitive | lineage4.6.1.1 | None | ERR126597 | MDR-TB | lineage4.4.1.2 | None | ERR3283006 | RR-TB | lineage4.9 | None | ERR3283032 | HR-TB | None | ERR3283017 | HR-TB | None | ERR3283021 | HR-TB | None | ERR3283024 | Other | None | ERR3283049 | Sensitive | lineage4.9 | None | ERR3283046 | MDR-TB | lineage4.9 | None | ERR3283048 | HR-TB | lineage4.9 | None | ERR3283058 | Other | lineage4.9 | None | ERR3283051 | Other | lineage4.9 | None | ERR3468544 | HR-TB | None | ERR4821179 | Other | lineage4.1.2.1 | gb | ERR3468488 | RR-TB | La1.8.1 | None | ERR3468670 | Other | La1.8.1 | None | ERR3468578 | Other | La1.8.1 | None | ERR3468655 | Other | La1.8.1 | None | ERR3468615 | Other | La1.8.1 | None | ERR3468671 | Other | La1.8.1 | None | ERR3468693 | Sensitive | lineage4.9 | None | ERR3468702 | Other | La1.8.1 | None | ERR3797062 | RR-TB | lineage4.9 | None | ERR3797016 | HR-TB | None | ERR3797017 | Other | None | ERR3797043 | HR-TB | None | ERR3797036 | HR-TB | None | ERR3797014 | Other | None | ERR3797023 | HR-TB | La1.8.1 | None | ERR3797047 | HR-TB | lineage4 | None | ERR3797044 | Other | None | ERR3797067 | Other | La1.8.1 | None | ERR3797060 | Other | La1.8.1 | None | ERR3797061 | Other | None | ERR3797065 | MDR-TB | lineage4 | None | ERR3801503 | Sensitive | lineage4.6.2.2 | None | ERR3797068 | Other | La1.8.1 | None | ERR4769436 | Other | La1.3 | None | ERR4188350 | HR-TB | None | ERR4769423 | Other | La1.3 | None | ERR4769433 | Pre-XDR-TB | lineage4.9 | None | ERR387051 | HR-TB | None | ERR400350 | Sensitive | lineage4.9 | None | ERR4188213 | HR-TB | La1.8.1 | None | ERR4188222 | MDR-TB | La1.8.1 | None | ERR4596902 | HR-TB | lineage3 | None | ERR4596906 | Sensitive | lineage1.1.2 | None | ERR4596937 | Sensitive | lineage1.1.2 | None | ERR4769419 | Other | lineage4.9 | None | ERR4796577 | MDR-TB | None | ERR4769472 | Other | lineage4.9 | None | ERR4769493 | Pre-XDR-TB | lineage4.9;La1.3 | None | ERR4769495 | Other | La1.3 | None | ERR4769502 | RR-TB | lineage4.9;La1.3 | None | ERR4796351 | MDR-TB | lineage4.9 | None | ERR4797141 | Sensitive | lineage3 | None | ERR4797201 | Other | lineage1.2.2.2 | None | ERR5908229 | Sensitive | lineage4.3.3 | None | ERR4798823 | HR-TB | lineage4 | None | ERR4811493 | HR-TB | None | ERR5908228 | Other | lineage4.3.3 | None | ERR245758 | Other | lineage4.9.1 | None | ERR5987263 | MDR-TB | lineage2.2.1 | None | ERR6358837 | HR-TB | None | ERR736835 | HR-TB | None | ERR751317 | Sensitive | lineage4.9 | None | ERR9119096 | Other | lineage4.3.3 | None | ERR773806 | Sensitive | lineage2.2.1 | None | SRR21732954 | Sensitive | lineage4.9 | None | ERR751329 | Sensitive | lineage5.1.1 | None | ERR760733 | MDR-TB | lineage4.1.2.1.1 | None | ERR772255 | MDR-TB | lineage4.3.2 | None | ERR037504 | Other | lineage4.9.1 | None | ERR8975534 | Sensitive | lineage4.3.4.2.1 | None | ERR8976043 | HR-TB | None | ERR9119500 | MDR-TB | lineage5.2 | None | ERR9119101 | Sensitive | lineage4.3.3 | None | ERR9119733 | MDR-TB | lineage2.2.1 | None | ERR9786444 | Sensitive | lineage4.8 | None | SRR069978 | Pre-XDR-TB | lineage2.2.2 | None | ERR9786711 | Sensitive | lineage4.6.2.2 | None | ERR9787153 | Other | lineage6.1.3 | None | ERR9992784 | Pre-XDR-TB | lineage2.2.2 | None | ERR987765 | Sensitive | lineage4.6.1.1 | None | SRR069989 | HR-TB | lineage2 | None | SRR069981 | HR-TB | lineage2.2.2 | None | SRR1013528 | Pre-XDR-TB | lineage2.2 | None | SRR1013527 | RR-TB | lineage2.2 | None | SRR10315567 | Other | lineage2.2.1 | None | SRR1013531 | MDR-TB | lineage4.9 | None | SRR1049674 | HR-TB | lineage2.2.1 | None | SRR1049630 | MDR-TB | lineage4.4.1.1 | None | SRR1049675 | HR-TB | lineage2.2.1 | None | SRR1062864 | Sensitive | lineage4.9;lineage2.2.1 | None | SRR1049725 | RR-TB | lineage4.1.2.1 | None | SRR1049752 | RR-TB | lineage4.6.1.2 | None | SRR1049726 | MDR-TB | lineage4.4.1.1;lineage4.1.2.1 | None | SRR1049751 | RR-TB | lineage4.6.1.2 | None | SRR1062865 | HR-TB | lineage2.2.2 | None | SRR1062895 | Other | lineage4.6.1.1 | None | SRR1062871 | MDR-TB | lineage4.3.4.2.1 | None | SRR1062867 | RR-TB | lineage4.9;lineage2.2.1 | None | SRR1062927 | MDR-TB | lineage4.6.1 | None | SRR1062897 | MDR-TB | lineage4.4.1.1 | None | SRR1062919 | HR-TB | lineage2.2.1 | None | SRR1062928 | RR-TB | lineage4 | None | SRR1062937 | HR-TB | lineage4.6.1 | None | SRR1062933 | Sensitive | lineage4.9 | None | SRR11342634 | MDR-TB | lineage4.8 | None | SRR1106670 | Other | lineage4.9 | None | SRR1140586 | HR-TB | lineage4.9 | None | SRR11349147 | RR-TB | lineage4.3.2.1 | None | SRR11342667 | MDR-TB | lineage4.3.3 | None | SRR11349133 | MDR-TB | lineage4.3.3 | None | SRR1140723 | Sensitive | lineage4.6.1.1 | None | SRR1140627 | Other | lineage4.6.1 | None | SRR1140736 | RR-TB | None | SRR1140724 | HR-TB | lineage2.2.1 | None | SRR1169473 | Sensitive | lineage1.1.2 | None | SRR1141261 | MDR-TB | lineage4.9 | None | SRR1140753 | MDR-TB | lineage4.3.4.2.1 | None | SRR11462861 | Other | La1.8.1 | None | SRR1172086 | Sensitive | lineage1.1.2 | None | SRR1169548 | Sensitive | lineage1.1.2 | None | SRR1169591 | Sensitive | lineage1.1.2 | None | SRR1172938 | MDR-TB | lineage3 | None | SRR1172710 | Sensitive | lineage1.2.2.2 | None | SRR1172873 | MDR-TB | lineage1.1.2 | None | SRR1172848 | MDR-TB | lineage1.1.2 | None | SRR1173037 | Sensitive | lineage1.1.2 | None | SRR1173013 | Sensitive | lineage1.1.2 | None | SRR1173014 | MDR-TB | lineage3 | None | SRR1173055 | MDR-TB | lineage2.2.1 | None | SRR1173335 | Sensitive | lineage4.9 | None | SRR1173117 | Sensitive | lineage1.1.2 | None | SRR1173310 | MDR-TB | None | SRR1173165 | Sensitive | lineage2.2.1 | None | SRR1173293 | MDR-TB | lineage4.6.1;lineage3.1.1 | None | SRR1173656 | Sensitive | lineage1.1.2 | None | SRR1173453 | Other | lineage4.4.1.1 | None | SRR1173621 | MDR-TB | lineage3 | None | SRR1173686 | MDR-TB | lineage3 | None | SRR11972425 | Pre-XDR-TB | lineage2.2.1 | None | SRR1173719 | HR-TB | lineage3 | None | SRR1173727 | MDR-TB | lineage3 | None | SRR1173865 | Sensitive | lineage4.9 | None | SRR1175151 | MDR-TB | lineage3 | None | SRR1175511 | MDR-TB | lineage4.8 | None | SRR1180440 | Other | lineage4.9 | None | SRR11972367 | Sensitive | lineage2.2.1 | None | SRR1173767 | HR-TB | lineage4.4.1.1 | None | SRR1180446 | Other | lineage4.9 | None | SRR13423544 | Other | lineage4.5 | None | SRR14066533 | Sensitive | lineage1.1.1 | None | SRR14334195 | Pre-XDR-TB | lineage2.2.1 | None | SRR1510066 | Other | lineage1.2.1.2.1 | None | SRR14334194 | Pre-XDR-TB | lineage2.2.1 | None | SRR14782539 | MDR-TB | lineage4.2.1 | None | SRR16156804 | RR-TB | lineage4.9 | None | SRR15368707 | HR-TB | lineage2.2.2;lineage2.2.1 | None | SRR16149129 | MDR-TB | lineage4.2.2.1 | None | SRR16156697 | MDR-TB | lineage2.2.1 | None | SRR16156814 | Sensitive | lineage4.9 | None | SRR16156832 | RR-TB | None | SRR18913742 | Sensitive | lineage3.1.3 | None | SRR17567887 | Sensitive | lineage4.4.1.2 | None | SRR17567917 | RR-TB | lineage4.4.1.1 | None | SRR1791696 | Other | La1.8.1 | None | SRR18002873 | Pre-XDR-TB | lineage4.4.2;lineage4.2.2;lineage2.2.1 | None | SRR18909918 | Other | lineage2.2.1.1 | None | SRR16157123 | Other | lineage4.9 | None | SRR17567930 | Other | lineage4.4.1.1 | None | SRR18002950 | MDR-TB | lineage2.2.1 | None | SRR19303775 | Other | lineage3 | None | SRR19303773 | Other | lineage4.6.2.2 | None | SRR19303779 | Sensitive | lineage4.8 | None | SRR19303774 | Sensitive | lineage4.1.2.1 | None | SRR5709967 | MDR-TB | lineage2.2.1 | None | SRR19303813 | HR-TB | lineage4.8 | None | SRR20969542 | Other | lineage4.4.2 | None | SRR19303788 | Sensitive | lineage4.8 | None | SRR19303806 | Sensitive | lineage4.1.2.1 | None | SRR19304064 | MDR-TB | lineage2.2.1 | None | SRR5709926 | MDR-TB | lineage2.2.1 | None | SRR23961558 | Other | lineage6.3;lineage4.9;lineage2.1 | None | SRR22424787 | Sensitive | lineage4.9 | None | SRR2101471 | RR-TB | lineage4.4.1.1 | None | SAMN02599090 | MDR-TB | lineage3 | None | ERR1035239 | HR-TB | None | SRR3675464 | HR-TB | lineage4.1 | None | SAMN02599094 | Sensitive | lineage1.1.2 | None | ERR161033 | HR-TB | None | SRR3675482 | HR-TB | None | SRR3675234 | Other | None | SRR3105762 | HR-TB | None | SRR3619841 | Pre-XDR-TB | lineage2.2.1 | None | ERR4814639 | HR-TB | lineage4 | None | ERR4814536 | MDR-TB | lineage3;lineage2.1 | None | SRR3618864 | Pre-XDR-TB | lineage2.2.1 | None | SAMEA3501073 | RR-TB | lineage4.8 | None | SRR3675312 | HR-TB | lineage4 | None | SRR3675280 | HR-TB | lineage4.9 | None | SRR3675284 | HR-TB | lineage4.9 | None | SRR3675383 | HR-TB | None | SAMN02381005 | Other | lineage4.6.1.1 | None | ERR4815079 | RR-TB | lineage3 | None | SRR3675456 | HR-TB | None | SAMN02381051 | RR-TB | lineage4.6.1.2 | None | ERR2027233 | RR-TB | lineage4.1.2.1 | None | SRR3675545 | HR-TB | None | SRR3675558 | HR-TB | None | ERR192070 | Other | None | SRR3675555 | HR-TB | None | ERR4816656 | HR-TB | None | ERR2229198 | MDR-TB | lineage4.8 | None | SRR3742667 | Sensitive | lineage4.9 | None | ERR4816762 | Other | lineage4;lineage2 | None | SAMN02599088 | Sensitive | lineage1.1.2 | None | SAMN02599089 | MDR-TB | lineage3 | None | ERR2228817 | Sensitive | lineage4 | None | ERR4817667 | HR-TB | lineage4.8 | None | SAMN02599179 | MDR-TB | lineage1.1.2 | None | SAMN02380982 | MDR-TB | lineage4.3.4.2 | None | ERR2513405 | Other | lineage2.2.1 | None | ERR3275196 | Other | lineage2.2.1 | nl | ERR3275548 | Sensitive | lineage3 | nl | ERR2229143 | Other | lineage4.1.1 | None | ERR2446413 | Sensitive | lineage4.6.3 | None | ERR234659 | HR-TB | None | ERR3275709 | HR-TB | lineage3 | nl | ERR4818929 | HR-TB | None | ERR4817554 | Other | lineage1.1.1 | None | ERR4818561 | HR-TB | lineage4 | None | ERR4818583 | Other | lineage4.3.3 | None | ERR4819430 | Sensitive | lineage4.1.2.1 | None | SRR5341365 | Pre-XDR-TB | lineage3 | None | ERR4819314 | Other | lineage1.1.1 | None | ERR4819546 | HR-TB | lineage3 | None | SAMN02599061 | MDR-TB | lineage3 | None | ERR4820394 | Other | lineage4.3.4.2.1 | None | ERR2514327 | HR-TB | lineage4.8 | None | ERR2514854 | Other | lineage4.3.3 | None | ERR4819910 | Other | lineage4.9 | None | SAMN02599075 | Sensitive | lineage1.1.2 | None | ERR2693237 | Other | lineage4.9 | None | SAMN02599068 | Sensitive | lineage1.2.2.2 | None | ERR2446563 | Other | lineage2.2.1 | nl | ERR2517457 | Sensitive | lineage3 | None | ERR2693231 | Other | None | SAMN02381047 | Sensitive | lineage4.6.1 | None | ERR2693230 | Other | None | ERR4821053 | Other | lineage3 | None | ERR2693239 | HR-TB | None | ERR2693257 | Other | None | ERR2693254 | Other | None | SRR6046117 | RR-TB | lineage4.9 | None | ERR2446544 | Sensitive | lineage3 | nl | ERR4821550 | Other | lineage2.2.1 | None | ERR2747656 | Other | La1.8.1 | None | SRR6046133 | HR-TB | None | SRR6045555 | HR-TB | None | SRR6046594 | HR-TB | lineage4 | None | ERR2693232 | Other | lineage4.9 | None | SRR6044890 | Other | lineage4.9 | None | SRR6045233 | HR-TB | None | SRR6046382 | HR-TB | lineage2.2.1 | None | SRR6046253 | HR-TB | lineage4.9 | None | ERR4829238 | Sensitive | lineage3 | None | SRR6046514 | HR-TB | None | SRR6397654 | HR-TB | lineage4.1.2.1 | None | SRR6046609 | Sensitive | lineage4.9 | None | SRR6046644 | HR-TB | None | SRR6046815 | Other | lineage3 | None | SRR6458421 | MDR-TB | lineage2.2.1 | None | SRR6046834 | Sensitive | lineage4.9 | None | ERR502470 | RR-TB | lineage4.9 | None | ERR3077978 | Other | lineage1.1 | None | ERR4872094 | MDR-TB | lineage5.2 | None | ERR4831117 | HR-TB | None | SRR6896383 | RR-TB | lineage4.4.1.1 | None | ERR4872269 | XDR-TB | lineage2.2.1 | None | ERR294248 | HR-TB | None | ERR5311099 | HR-TB | None | ERR323034 | HR-TB | lineage3.1 | None | ERR323036 | HR-TB | None | ERR502517 | MDR-TB | lineage5.1.1 | None | SRR6896545 | Other | lineage4.9 | None | ERR4817628 | Sensitive | lineage4.8 | gb | ERR323035 | Sensitive | lineage4.9 | None | ERR5311077 | RR-TB | La1.8.1 | None | ERR5311084 | Other | La1.8.1 | None | ERR5311087 | Other | La1.8.1 | None | ERR5311081 | HR-TB | None | ERR5311092 | Other | La1.8.1 | None | ERR5311090 | HR-TB | None |
|---|
