EBG00000313325 - n.980G>A
Drug resistance types
16 Sensitive
29 RR-TB
10 HR-TB
27 MDR-TB
15 Pre-XDR-TB
0 XDR-TB
137 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9 | 40 |
| lineage3;lineage4 | 3 |
| lineage4.3.3 | 8 |
| lineage4 | 1 |
| lineage2.2.1 | 42 |
| lineage5 | 1 |
| lineage4.3.2.1 | 3 |
| lineage4.1.2.1 | 13 |
| lineage2.2.2 | 6 |
| lineage4.2.1 | 3 |
| lineage3.1.1 | 2 |
| lineage4.4.1.2 | 1 |
| lineage3;lineage4.9 | 1 |
| lineage4.1.2 | 2 |
| lineage4.4.1.1 | 6 |
| lineage4.3.4.2 | 4 |
| lineage4.3 | 2 |
| La1.7.1 | 2 |
| La1.8.1 | 7 |
| 1 | |
| lineage4.8 | 14 |
| lineage4.1.1.3 | 6 |
| lineage4.8.1 | 2 |
| lineage4.3.2 | 2 |
| lineage4.2.2.2 | 2 |
| lineage4.1.1.1 | 2 |
| lineage4.9.1 | 1 |
| lineage4.3.4.1 | 1 |
| lineage2.2.1.1 | 5 |
| lineage1.2.2.2 | 3 |
| lineage4.1.2.1;lineage4.9 | 2 |
| lineage1.1.3 | 1 |
| lineage3 | 9 |
| lineage4.4.2 | 3 |
| lineage4.4.1.1.1 | 2 |
| lineage1.2.1.2.1 | 1 |
| lineage4.2.1.1 | 1 |
| lineage4.1 | 2 |
| lineage3.1 | 1 |
| La1.2 | 1 |
| lineage3.1.2.1 | 2 |
| lineage4.2.1.1;lineage4.3.3 | 1 |
| lineage1.2.1.1 | 1 |
| lineage2.2.1;lineage4 | 1 |
| lineage4.1.2;lineage4.9 | 1 |
| La2 | 1 |
| lineage4.6.1.2 | 2 |
| lineage3.1.2.1;lineage4.9 | 1 |
| lineage4.1.3 | 2 |
| lineage4.1.2.1;lineage4.4.1.1 | 1 |
| lineage4.3.4.1;lineage4.9 | 1 |
| lineage1.1.1.1 | 1 |
| lineage2;lineage4 | 1 |
| lineage4.1;lineage4.9 | 1 |
| lineage4.1.2.1;lineage4.4.1 | 1 |
| La1.6 | 1 |
| lineage4.3.4.2.1 | 2 |
| lineage6.1.3 | 1 |
| lineage1.1.3.1 | 1 |
| lineage4.2.2 | 1 |
| lineage1.1.2 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 234 |
Geographic prevalence
Country level data for this variant is available for 8 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR10796596 | Other | lineage4.9 | None | SRR1173740 | Other | lineage3;lineage4 | None | SRR5818448 | Other | lineage4.9 | None | SRR21675949 | Other | lineage4.3.3 | None | ERR4829333 | Other | lineage4 | None | DRR184982 | Other | lineage2.2.1 | None | ERR4816967 | Other | lineage5 | None | SRR6982383 | Other | lineage4.3.2.1 | None | ERR4818646 | Sensitive | lineage4.1.2.1 | None | ERR10796577 | Other | lineage4.9 | None | ERR4815901 | Other | lineage2.2.2 | None | SRR14801325 | Pre-XDR-TB | lineage4.2.1 | None | ERR4820410 | RR-TB | lineage3.1.1 | None | ERR10796636 | Other | lineage4.1.2.1 | None | ERR126597 | HR-TB | lineage4.4.1.2 | None | ERR4769516 | Sensitive | lineage4.9 | None | ERR4817584 | Other | lineage3;lineage4.9 | None | SRR11342658 | RR-TB | lineage4.1.2 | None | ERR3275615 | Sensitive | lineage4.4.1.1 | nl | SRR7131195 | Other | lineage2.2.1 | None | SRR2101643 | Other | lineage2.2.1 | None | ERR9786844 | Other | lineage4.3.4.2 | None | ERR4816510 | Other | lineage4.1.2.1 | None | ERR10796593 | Other | lineage4.3 | None | ERR2515191 | Other | lineage2.2.1 | za | SRR18002947 | MDR-TB | lineage2.2.1 | None | ERR4819863 | RR-TB | lineage4.9 | None | SRR13199746 | Other | La1.7.1 | None | ERR867569 | Other | lineage4.9 | None | ERR867522 | Pre-XDR-TB | lineage2.2.1 | None | SRR7236240 | Other | La1.8.1 | None | ERR4817069 | RR-TB | None | SRR22424765 | HR-TB | lineage4.8 | None | SRR10315558 | RR-TB | lineage2.2.1 | None | ERR4819175 | Other | lineage4.1.1.3 | gb | SRR1049675 | HR-TB | lineage2.2.1 | None | SRR11342662 | MDR-TB | lineage4.8.1 | None | ERR4819307 | Other | lineage4.3.2 | None | ERR4819948 | Other | lineage4.4.1.1 | None | ERR4822261 | RR-TB | lineage2.2.1 | None | SRR5818388 | Other | lineage4.9 | None | SRR11342649 | MDR-TB | lineage4.3.3 | None | SRR1180440 | Other | lineage4.9 | None | SRR1181256 | Other | lineage4.9 | None | ERR3283033 | Sensitive | lineage4.9 | None | SRR7131147 | Other | lineage4.1.2.1 | None | ERR10796564 | Other | lineage4.3.3 | None | SRR11972425 | Pre-XDR-TB | lineage2.2.1 | None | SRR6982239 | Sensitive | lineage4.1.1.3 | None | SAMEA3501073 | RR-TB | lineage4.8 | None | SRR3675552 | Other | lineage4.9 | None | SRR6046117 | Other | lineage4.9 | None | SRR11342687 | RR-TB | lineage4.2.2.2 | None | ERR3806453 | Other | lineage4.3.4.2 | None | SRR11342642 | MDR-TB | lineage4.1.1.1 | None | ERR2027257 | Other | lineage4.1.2.1 | None | ERR867524 | Pre-XDR-TB | lineage4.2.1 | None | SRR10869071 | MDR-TB | lineage2.2.1 | None | ERR4816610 | Other | lineage4.3.3 | None | SRR3675230 | Other | lineage3;lineage4 | None | ERR4820720 | Other | lineage4.1.2.1 | None | ERR867573 | Other | lineage4.9 | None | SRR2101628 | Other | lineage4.3.2.1 | None | ERR2851359 | Other | lineage4.9 | None | SAMN02567685 | Pre-XDR-TB | lineage2.2.1 | None | ERR4815909 | Other | lineage4.8 | None | SRR11342686 | MDR-TB | lineage4.8 | None | ERR216928 | Other | lineage4.9.1 | None | SRR11342660 | MDR-TB | lineage2.2.1 | None | ERR867554 | Other | lineage4.3.4.1 | None | SRR6982140 | Other | lineage2.2.1.1 | None | ERR10796591 | Other | lineage4.9 | None | SRR10315567 | HR-TB | lineage2.2.1 | None | ERR4820959 | Other | lineage4.1.2.1 | None | SRR21728710 | Other | lineage4.1.1.3 | None | ERR736820 | MDR-TB | lineage1.2.2.2 | None | ERR502478 | RR-TB | lineage4.9 | None | ERR4819096 | Other | lineage4.4.1.1 | None | ERR867572 | Other | lineage4.9 | None | SRR1062928 | Other | lineage4.1.2.1;lineage4.9 | None | SRR5818464 | Other | lineage4.9 | None | SRR6982494 | Other | lineage2.2.2 | None | ERR4821007 | Other | lineage1.2.2.2 | None | ERR867541 | MDR-TB | lineage4.2.1 | None | SRR11342664 | MDR-TB | lineage2.2.2 | None | ERR978767 | RR-TB | lineage4.8 | None | SRR21711124 | Other | lineage1.1.3 | None | ERR867540 | MDR-TB | lineage2.2.1 | None | ERR4815467 | Other | lineage3 | None | ERR978766 | RR-TB | lineage4.8 | None | SRR3618864 | Pre-XDR-TB | lineage2.2.1 | None | SRR10315556 | Sensitive | lineage2.2.1 | None | ERR867567 | RR-TB | lineage3 | None | ERR2446154 | Sensitive | lineage4.4.1.1 | nl | ERR978767_ERR978765_ERR978766 | RR-TB | lineage4.8 | None | ERR4811101 | Other | lineage4.4.2 | None | SRR1791909 | Other | La1.7.1 | None | SRR11342696 | MDR-TB | lineage4.4.1.1.1 | None | ERR867538 | Other | lineage4.2.2.2 | None | SRR1792140 | Other | La1.8.1 | None | ERR10796589 | Other | lineage4.9 | None | SRR3619841 | Pre-XDR-TB | lineage2.2.1 | None | SRR18003024 | RR-TB | lineage2.2.1 | None | SRR19303820 | RR-TB | lineage4.8 | None | ERR4820075 | Other | lineage4.1.2.1 | None | ERR10796598 | Other | lineage4.9 | None | SRR11342647 | MDR-TB | lineage4.1.1.3 | None | ERR4821214 | Other | lineage1.2.1.2.1 | None | SRR2101691 | Other | lineage2.2.1 | None | ERR4819383 | RR-TB | lineage4.9 | None | SRR11349147 | RR-TB | lineage4.3.2.1 | None | SRR6785281 | Other | lineage4.2.1.1 | None | ERR4815502 | Other | lineage4.1 | None | ERR867525 | Pre-XDR-TB | lineage2.2.1 | None | SRR18002998 | Pre-XDR-TB | lineage2.2.2 | None | ERR4815427 | HR-TB | lineage3.1 | gb | ERR6337385 | Other | La1.2 | None | ERR4819011 | Other | lineage3.1.2.1 | None | SRR9971114 | Other | lineage2.2.1 | None | ERR10796635 | Other | lineage4.8 | None | ERR867542 | HR-TB | lineage4.2.1.1;lineage4.3.3 | None | ERR2027209 | MDR-TB | lineage1.2.1.1 | None | SRR7070320 | Other | lineage4.8 | None | ERR4821176 | Other | lineage2.2.1 | None | ERR867568 | Other | lineage2.2.1;lineage4 | None | SRR7236178 | Other | La1.8.1 | None | ERR10796561 | Other | lineage4.3.2 | None | SRR6982246 | RR-TB | lineage4.1.2;lineage4.9 | None | SRR18003004 | Pre-XDR-TB | lineage2.2.2 | None | ERR10796583 | Other | lineage2.2.1 | None | ERR10796628 | Other | lineage4.3.3 | None | ERR10796626 | Other | lineage4.1.2.1 | None | ERR4819765 | Other | lineage4.1 | None | ERR10796599 | Other | lineage4.8 | None | SRR18909918 | Other | lineage2.2.1.1 | None | ERR10796581 | Other | lineage4.1.2 | None | ERR4814763 | Other | lineage2.2.1 | None | SRR18911231 | Sensitive | lineage4.1.1.3 | None | SRR5818449 | MDR-TB | lineage4.9 | None | ERR773804 | Sensitive | lineage4.9 | None | ERR4816745 | Pre-XDR-TB | lineage2.2.1 | None | ERR867526 | MDR-TB | lineage2.2.1 | None | SRR13888750 | Other | La2 | None | SRR16156188 | Sensitive | lineage4.9 | None | ERR10796565 | Other | lineage4.9 | None | SAMN02380990 | MDR-TB | lineage4.6.1.2 | None | ERR502473 | RR-TB | lineage4.9 | None | ERR2027290 | Other | lineage3.1.2.1;lineage4.9 | None | ERR9896153 | RR-TB | lineage4.4.1.1 | None | ERR867555 | Other | lineage3 | None | SRR9971333 | MDR-TB | lineage4.1.1.3 | None | ERR867570 | RR-TB | lineage4.9 | None | ERR4821334 | Other | lineage4.1.3 | None | ERR10796578 | Other | lineage2.2.1 | None | SRR6046376 | Other | lineage3 | None | ERR4818977 | Other | lineage4.1.2.1 | None | ERR10762495 | MDR-TB | lineage2.2.1 | None | ERR4816928 | HR-TB | lineage1.2.2.2 | None | SRR9971112 | HR-TB | lineage2.2.1 | None | SRR18911138 | Other | lineage3 | None | SRR1049726 | Other | lineage4.1.2.1;lineage4.4.1.1 | None | ERR10796558 | Sensitive | lineage4.3.4.1;lineage4.9 | None | DRR185024 | Other | lineage2.2.2 | None | DRR185000 | Other | lineage1.1.1.1 | None | ERR2886463 | Sensitive | lineage2.2.1 | None | ERR4820484 | Sensitive | lineage4.8 | None | ERR4818522 | Other | lineage3 | None | ERR4814748 | Other | lineage4.8 | None | SRR13423546 | Other | lineage4.4.2 | None | ERR4821679 | Other | lineage4.3.3 | None | SRR1184329 | Other | lineage4.9 | None | SRR9971122 | MDR-TB | lineage4.8 | None | ERR867571 | Other | lineage4.9 | None | ERR1023509 | MDR-TB | lineage4.9 | None | ERR1023502 | MDR-TB | lineage2;lineage4 | None | SRR7240448 | Other | La1.8.1 | None | ERR4814896 | Other | lineage2.2.1.1 | None | ERR867521 | MDR-TB | lineage2.2.1 | None | SRR1735598 | RR-TB | lineage4.9 | None | ERR10796629 | Other | lineage4.1;lineage4.9 | None | SRR6982194 | Other | lineage2.2.1 | None | ERR4816866 | Other | lineage2.2.1 | None | SRR7240449 | Other | La1.8.1 | None | ERR10796576 | Sensitive | lineage4.9 | None | ERR4820586 | Other | lineage3 | gb | SRR11342644 | MDR-TB | lineage4.4.1.1.1 | None | SRR5818445 | Other | lineage4.9 | None | SRR5818397 | Other | lineage4.9 | None | ERR2515662 | Other | lineage2.2.1 | za | SRR1049725 | Other | lineage4.1.2.1;lineage4.4.1 | None | SRR21728339 | Other | lineage3 | None | SRR10993951 | RR-TB | La1.6 | None | ERR245790 | Sensitive | lineage4.3.4.2.1 | None | SRR1181403 | Other | lineage4.9 | None | ERR4769417 | Pre-XDR-TB | lineage4.9 | None | SRR5818395 | Sensitive | lineage4.9 | None | ERR867527 | Pre-XDR-TB | lineage2.2.1 | None | ERR4816310 | HR-TB | lineage4.6.1.2 | None | SRR5818462 | Other | lineage4.9 | None | SRR18002974 | Other | lineage2.2.1 | None | SRR15316595 | RR-TB | lineage4.4.2 | None | SRR7240070 | Other | La1.8.1 | None | ERR4818393 | RR-TB | lineage3;lineage4 | None | ERR3806588 | Other | lineage6.1.3 | None | ERR10796633 | Other | lineage4.3.4.2 | None | SRR6981966 | Other | lineage2.2.1 | None | ERR867575 | Other | lineage4.9 | None | SRR21727760 | Other | lineage2.2.1 | None | ERR10219876 | Other | lineage4.3.4.2 | None | ERR3275941 | RR-TB | lineage4.3 | nl | ERR4820019 | Other | lineage4.3.4.2.1 | None | ERR4819772 | Other | lineage1.1.3.1 | None | ERR10796620 | Other | lineage4.1.1.1 | None | ERR4818851 | RR-TB | lineage4.4.1.1 | None | SRR11342671 | RR-TB | lineage4.1.3 | None | DRR188816 | Other | lineage4.2.2 | None | ERR10796571 | Other | lineage4.9 | None | SRR18913779 | Other | lineage3 | None | SRR11342668 | Pre-XDR-TB | lineage4.8.1 | None | SRR7069800 | Other | lineage3.1.2.1 | None | SRR22424778 | RR-TB | lineage2.2.1.1 | None | ERR10796640 | Other | lineage4.1.2.1 | None | ERR10796563 | Other | lineage4.3.3 | None | SRR1049674 | HR-TB | lineage2.2.1 | None | ERR4819533 | Other | lineage1.1.2 | None | SRR11342636 | MDR-TB | lineage4.3.3 | None | ERR10796555 | Other | lineage4.1.2.1 | None | SRR7240068 | Other | La1.8.1 | None | ERR216901 | Other | lineage3.1.1 | None | ERR10796627 | Other | lineage4.1.2.1;lineage4.9 | None | ERR4821769 | Other | lineage4.1.2.1 | None | SRR18002887 | MDR-TB | lineage2.2.1.1 | None | SRR11972417 | MDR-TB | lineage2.2.1 | None | ERR867523 | Pre-XDR-TB | lineage2.2.1 | None |
|---|
