Rv0668 - c.-444C>G
Drug resistance types
15 Sensitive
19 RR-TB
17 HR-TB
22 MDR-TB
14 Pre-XDR-TB
0 XDR-TB
35 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.4.1.1.1 | 2 |
| lineage4.9 | 30 |
| 1 | |
| lineage4.4.1.1 | 4 |
| lineage4.1.1.3.1 | 2 |
| lineage2.2.1 | 23 |
| lineage2.2.2 | 4 |
| lineage4.3.4.2 | 1 |
| lineage4.1.2.1 | 3 |
| lineage2.2;lineage4 | 1 |
| lineage2.2;lineage4.9 | 1 |
| lineage3;lineage4 | 1 |
| lineage4.1.3 | 1 |
| lineage4.8 | 4 |
| lineage4.1.1.1 | 3 |
| lineage4.3;lineage4.9 | 1 |
| lineage4.5 | 1 |
| lineage1.2.2.2 | 1 |
| lineage4.3.4.2.1 | 2 |
| lineage4.3.2.1 | 2 |
| lineage4.9;lineage7 | 1 |
| lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 | 1 |
| M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 | 1 |
| La1;lineage4.9 | 1 |
| lineage4.8.1 | 2 |
| lineage1.2.1.1 | 1 |
| lineage4.3.3 | 5 |
| lineage4.2.1 | 2 |
| La1.7.1 | 1 |
| lineage4.3.1.1 | 1 |
| lineage4.1.1.3 | 4 |
| lineage3 | 2 |
| lineage4.1.1.3.1;lineage4.9 | 1 |
| lineage4.1.2 | 1 |
| La1.8.1 | 1 |
| lineage4.2.1.1;lineage4.3.3 | 1 |
| lineage4.2.2.2 | 1 |
| lineage1.1.3.1 | 1 |
| lineage3.1.2.1 | 1 |
| lineage4.9;lineage6.3 | 1 |
| lineage4.8.2;lineage4.9 | 1 |
| lineage1.1.2;lineage6.2.3 | 1 |
| lineage3.1.1 | 1 |
| lineage2.2.1;lineage4.9 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 122 |
Geographic prevalence
Country level data for this variant is available for 3 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR11342644 | MDR-TB | lineage4.4.1.1.1 | None | SRR6044780 | Sensitive | lineage4.9 | None | ERR4817060 | Other | None | ERR4819051 | Sensitive | lineage4.9 | None | ERR4818710 | Sensitive | lineage4.9 | None | ERR4769417 | Pre-XDR-TB | lineage4.9 | None | SRR17567917 | RR-TB | lineage4.4.1.1 | None | SRR5007167 | RR-TB | lineage4.1.1.3.1 | None | ERR867527 | Pre-XDR-TB | lineage2.2.1 | None | ERR4809333 | Pre-XDR-TB | lineage2.2.2 | None | SRR16156697 | RR-TB | lineage2.2.1 | None | ERR10796633 | Other | lineage4.3.4.2 | None | ERR2027257 | Other | lineage4.1.2.1 | None | SRR16156832 | RR-TB | lineage2.2;lineage4 | None | SRR3601585 | Pre-XDR-TB | lineage2.2.1 | None | ERR4815550 | Other | lineage2.2;lineage4.9 | None | SRR3675230 | Other | lineage3;lineage4 | None | ERR4818851 | RR-TB | lineage4.4.1.1 | None | SRR11342671 | RR-TB | lineage4.1.3 | None | ERR4818536 | Other | lineage4.9 | None | SRR12708415 | HR-TB | lineage2.2.1 | None | SRR11342686 | MDR-TB | lineage4.8 | None | SRR11342651 | MDR-TB | lineage4.1.1.1 | None | ERR036207 | Other | lineage4.3;lineage4.9 | None | SRR12708414 | HR-TB | lineage2.2.1 | None | ERR867526 | MDR-TB | lineage2.2.1 | None | ERR4816548 | HR-TB | lineage4.5 | None | ERR9119733 | MDR-TB | lineage2.2.1 | None | SRR18002903 | Pre-XDR-TB | lineage2.2.1 | None | SRR12708411 | HR-TB | lineage1.2.2.2 | None | SRR7131030 | Other | lineage4.1.2.1 | None | ERR212114 | Other | lineage4.3.4.2.1 | None | SRR12708396 | MDR-TB | lineage4.3.2.1 | None | SRR3618864 | Pre-XDR-TB | lineage2.2.1 | None | SRR10315556 | Sensitive | lineage2.2.1 | None | ERR6359069 | HR-TB | lineage4.9 | None | ERR3275615 | Sensitive | lineage4.4.1.1 | nl | ERR4831117 | HR-TB | lineage4.9;lineage7 | None | SRR12708392 | Other | lineage2.2.1 | None | ERR6358991 | HR-TB | lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 | None | SRR1173185 | Other | lineage4.9 | None | ERR473303 | Sensitive | lineage4.9 | None | ERR867525 | Pre-XDR-TB | lineage2.2.1 | None | ERR473334 | HR-TB | lineage4.9 | None | ERR11252599 | Other | M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 | None | ERR9786639 | Sensitive | lineage4.8 | None | ERR4769497 | Other | La1;lineage4.9 | None | ERR4808964 | RR-TB | lineage2.2.1 | None | SRR11342662 | MDR-TB | lineage4.8.1 | None | SRR12708418 | HR-TB | lineage2.2.1 | None | ERR2027209 | MDR-TB | lineage1.2.1.1 | None | SRR11342649 | MDR-TB | lineage4.3.3 | None | ERR4819357 | Sensitive | lineage4.9 | None | ERR4769493 | Other | lineage4.9 | None | SRR6045010 | Sensitive | lineage4.9 | None | ERR6359070 | Sensitive | lineage4.9 | None | SRR3619764 | Pre-XDR-TB | lineage2.2.1 | None | SRR6046492 | Other | lineage4.9 | None | ERR4816964 | HR-TB | lineage4.9 | None | ERR10796564 | Other | lineage4.3.3 | None | SRR11342642 | MDR-TB | lineage4.1.1.1 | None | ERR867524 | Pre-XDR-TB | lineage4.2.1 | None | SRR1181161 | Other | lineage4.9 | None | SRR12708407 | HR-TB | lineage4.3.2.1 | None | ERR4818624 | Other | lineage4.3.4.2.1 | None | SRR11342660 | MDR-TB | lineage2.2.1 | None | SRR7070293 | Other | lineage4.8 | None | ERR10796565 | Other | lineage4.9 | None | SRR21469200 | Other | La1.7.1 | None | SRR14801652 | HR-TB | lineage4.3.3 | None | ERR867523 | Pre-XDR-TB | lineage2.2.1 | None | SRR6046616 | Other | lineage4.3.1.1 | None | ERR867541 | MDR-TB | lineage4.2.1 | None | ERR4815471 | HR-TB | lineage4.9 | None | SRR12708413 | HR-TB | lineage4.1.1.3 | None | SRR6046376 | Other | lineage3 | None | SRR11342664 | MDR-TB | lineage2.2.2 | None | ERR3276170 | Other | lineage4.1.2.1 | nl | ERR4821704 | Other | lineage4.3.3 | None | ERR176751 | HR-TB | lineage4.9 | None | SRR5007161 | RR-TB | lineage4.1.1.3.1;lineage4.9 | None | ERR3797062 | RR-TB | lineage4.9 | None | SRR19303820 | RR-TB | lineage4.8 | None | ERR10796598 | Other | lineage4.9 | None | SRR11342658 | RR-TB | lineage4.1.2 | None | SRR11342647 | MDR-TB | lineage4.1.1.3 | None | SRR1196478 | Other | lineage4.9 | None | ERR5987263 | MDR-TB | lineage2.2.1 | None | ERR4818110 | Sensitive | lineage4.9 | None | ERR3283006 | RR-TB | lineage4.9 | None | ERR1034647 | MDR-TB | lineage4.1.1.3 | None | SRR5007193 | RR-TB | lineage4.1.1.3.1 | None | SRR1792022 | Other | La1.8.1 | None | ERR867542 | HR-TB | lineage4.2.1.1;lineage4.3.3 | None | SRR5341330 | Other | lineage4.9 | None | SRR18003004 | Pre-XDR-TB | lineage2.2.2 | None | ERR5162090 | RR-TB | lineage4.9 | None | SRR11972425 | Pre-XDR-TB | lineage2.2.1 | None | SRR11342687 | RR-TB | lineage4.2.2.2 | None | SRR18911231 | Sensitive | lineage4.1.1.3 | None | ERR10796620 | Other | lineage4.1.1.1 | None | ERR4819864 | RR-TB | lineage1.1.3.1 | None | SRR11342636 | MDR-TB | lineage4.3.3 | None | SRR12708370 | Pre-XDR-TB | lineage2.2.2 | None | SRR11342653 | MDR-TB | lineage2.2.1 | None | SRR11342693 | MDR-TB | lineage4.8.1 | None | SRR7070195 | Sensitive | lineage3.1.2.1 | None | ERR212121 | HR-TB | lineage4.9;lineage6.3 | None | ERR867567 | RR-TB | lineage3 | None | ERR4819462 | Sensitive | lineage4.9 | None | ERR2446154 | Sensitive | lineage4.4.1.1 | nl | SRR5007168 | Other | lineage4.8.2;lineage4.9 | None | SRR5007170 | Other | lineage4.9 | None | SRR11342696 | MDR-TB | lineage4.4.1.1.1 | None | ERR3324368 | RR-TB | lineage1.1.2;lineage6.2.3 | None | SRR3619841 | Pre-XDR-TB | lineage2.2.1 | None | SRR1184329 | Other | lineage4.9 | None | SRR1173310 | Other | lineage3.1.1 | None | ERR4815310 | Other | lineage2.2.1;lineage4.9 | None | SRR18002947 | MDR-TB | lineage2.2.1 | None | SRR1735598 | RR-TB | lineage4.9 | None | SRR11342655 | MDR-TB | lineage2.2.1 | None |
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