EBG00000313339 - n.944C>T
Drug resistance types
27 Sensitive
18 RR-TB
9 HR-TB
21 MDR-TB
8 Pre-XDR-TB
1 XDR-TB
52 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage2.2.1 | 13 |
| lineage2.2 | 3 |
| lineage4.8 | 5 |
| lineage4.4.1.1 | 3 |
| lineage4.1.2.1 | 11 |
| lineage4.1.1.3 | 6 |
| lineage2.2.1.1 | 2 |
| lineage4.9 | 34 |
| lineage4.6.2.2 | 4 |
| lineage3 | 2 |
| lineage6.3.1 | 2 |
| lineage3.1.1 | 2 |
| lineage1.1.3.1 | 1 |
| lineage4.9;lineage4.2.1 | 1 |
| 3 | |
| lineage4.2.2.2 | 1 |
| lineage4.3.1.1 | 1 |
| lineage4 | 4 |
| lineage4.2.1 | 2 |
| lineage4.3.3 | 5 |
| lineage4.2.1.1 | 1 |
| La1.8.1 | 11 |
| lineage4.7 | 2 |
| lineage4.3.4.2 | 2 |
| lineage4.3.4.1 | 2 |
| lineage6.2.3;lineage1.1.2 | 1 |
| lineage4.3.4.2.1 | 1 |
| lineage4.1.1.2 | 1 |
| lineage4.8;lineage4.3.3 | 4 |
| lineage4.4.1.1.1 | 1 |
| lineage2.2.2 | 1 |
| lineage4.4.2 | 2 |
| La1.7.1 | 2 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 136 |
Geographic prevalence
Country level data for this variant is available for 3 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR3619841 | Pre-XDR-TB | lineage2.2.1 | None | SRR3601585 | Pre-XDR-TB | lineage2.2 | None | ERR4815193 | MDR-TB | lineage4.8 | None | ERR1750889 | Other | lineage4.4.1.1 | None | SRR3619764 | Pre-XDR-TB | lineage2.2 | None | SRR3618864 | Pre-XDR-TB | lineage2.2.1 | None | ERR171135 | Other | lineage2.2.1 | za | ERR4816079 | Sensitive | lineage4.1.2.1 | None | ERR1750921 | Sensitive | lineage4.1.1.3 | None | ERR1750916 | Other | lineage2.2.1.1 | None | ERR4817204 | RR-TB | lineage4.9 | None | ERR2027285 | MDR-TB | lineage4.6.2.2 | None | ERR4817121 | Sensitive | lineage3 | None | SRR4033523 | Other | lineage2.2 | None | ERR4816702 | RR-TB | lineage4.6.2.2 | None | ERR4816755 | Other | lineage4.1.1.3 | None | ERR4817915 | RR-TB | lineage4.9 | None | ERR4818440 | Other | lineage6.3.1 | None | ERR4818128 | RR-TB | lineage4.1.2.1 | None | ERR1750899 | Sensitive | lineage4.1.1.3 | zw | ERR4820367 | Sensitive | lineage3.1.1 | None | ERR4819096 | Other | lineage4.4.1.1 | None | ERR4820829 | Other | lineage4.8 | None | ERR4819784 | Other | lineage4.1.2.1 | None | ERR4819864 | RR-TB | lineage1.1.3.1 | None | ERR4819910 | Other | lineage4.9 | None | ERR4821799 | Other | lineage2.2.1 | None | ERR2693238 | HR-TB | lineage4.9 | None | ERR4821119 | Other | lineage4.4.1.1 | None | ERR4821276 | Other | lineage3 | None | ERR4821372 | Other | lineage4.1.2.1 | None | ERR4821286 | Other | lineage4.8 | None | ERR4821747 | MDR-TB | lineage4.9;lineage4.2.1 | None | ERR4821712 | HR-TB | None | SRR5818586 | RR-TB | lineage4.2.2.2 | None | ERR4829296 | Sensitive | lineage4.1.2.1 | None | SRR6045002 | MDR-TB | lineage4.9 | None | SRR6045071 | Other | lineage4.3.1.1 | None | ERR4829767 | HR-TB | lineage4.8 | None | ERR4829333 | RR-TB | lineage4 | None | ERR4829692 | Sensitive | lineage4.1.2.1 | None | ERR4829769 | MDR-TB | lineage4.2.1 | None | ERR502482 | Sensitive | lineage4.9 | None | ERR4812328 | Other | lineage4.3.3 | pe | ERR502472 | Other | lineage4.6.2.2 | None | ERR502483 | Sensitive | lineage4.9 | None | ERR502492 | Sensitive | lineage4.9 | None | ERR502489 | Sensitive | lineage4.9 | None | ERR502484 | Sensitive | lineage4.9 | None | ERR502485 | Sensitive | lineage4.9 | None | ERR502486 | Sensitive | lineage4.9 | None | ERR502490 | Sensitive | lineage4.9 | None | ERR502493 | Sensitive | lineage4.9 | None | ERR502498 | Sensitive | lineage4.9 | None | SRR6785281 | Other | lineage4.2.1.1 | None | ERR4872322 | Pre-XDR-TB | lineage2.2.1 | None | ERR502497 | Sensitive | lineage4.9 | None | SRR6824501 | Pre-XDR-TB | lineage2.2.1 | None | SRR6982076 | Sensitive | lineage4.9 | None | ERR502523 | Other | lineage6.3.1 | None | SRR9971080 | RR-TB | lineage2.2.1 | None | ERR5087500 | Other | La1.8.1 | None | SRR7131155 | Sensitive | lineage4.7 | None | SRR7645936 | Sensitive | lineage2.2.1 | None | ERR5087846 | Other | La1.8.1 | None | ERR5087486 | Other | La1.8.1 | None | ERR5087596 | Other | La1.8.1 | None | SRR7131171 | Sensitive | lineage4.1.2.1 | None | ERR036207 | Other | lineage4.9 | None | DRR184982 | RR-TB | lineage2.2.1 | None | ERR036198 | Other | lineage4.3.4.2 | None | ERR1034647 | MDR-TB | lineage4.1.1.3 | None | ERR038289 | Other | lineage4.3.3 | None | ERR10796630 | HR-TB | None | ERR10796552 | Sensitive | lineage4.3.4.1 | None | ERR10762248 | MDR-TB | lineage4.2.1 | None | ERR10762495 | MDR-TB | lineage2.2.1 | None | ERR10796559 | Other | lineage4.9 | None | ERR3439489 | RR-TB | La1.8.1 | None | ERR11465562 | Other | lineage4.1.2.1 | None | ERR3283051 | Other | lineage4.9 | None | ERR3283008 | Other | lineage4.9 | None | ERR3283043 | Other | lineage4.9 | None | ERR3324368 | RR-TB | lineage6.2.3;lineage1.1.2 | None | ERR4187652 | Other | lineage4.9 | None | ERR3468791 | Other | La1.8.1 | None | ERR212114 | Other | lineage4.3.4.2.1 | None | ERR4811708 | HR-TB | lineage4 | None | ERR5917985 | MDR-TB | lineage2.2.1 | None | ERR6358979 | Other | None | ERR8975044 | Other | lineage4.1.1.2 | None | ERR4769553 | RR-TB | lineage4.9 | None | ERR9786164 | RR-TB | lineage4.1.1.3 | None | ERR970449 | RR-TB | lineage4.1.1.3 | None | ERR9992879 | XDR-TB | lineage4.3.3 | None | ERR987695 | HR-TB | lineage4.3.4.2 | None | ERR987707 | MDR-TB | lineage4.7 | None | SRR1049676 | MDR-TB | lineage4.8;lineage4.3.3 | None | SRR10315641 | MDR-TB | lineage4.4.1.1.1 | None | SRR1062920 | MDR-TB | lineage4.8;lineage4.3.3 | None | SRR1049677 | MDR-TB | lineage4.8;lineage4.3.3 | None | SRR1062865 | HR-TB | lineage2.2.2 | None | SRR10869254 | Pre-XDR-TB | lineage2.2.1 | None | SRR1173185 | HR-TB | lineage4.9 | None | SRR1140574 | MDR-TB | lineage4.8;lineage4.3.3 | None | SRR1180252 | Other | lineage4.9 | None | SRR1173450 | RR-TB | lineage4.9 | None | SRR1175473 | Other | lineage4.9 | None | SRR1175472 | MDR-TB | lineage4 | None | SRR1175474 | HR-TB | lineage4.9 | None | SRR1175491 | MDR-TB | lineage4 | None | SRR1183080 | RR-TB | lineage4.9 | None | SRR1181161 | Other | lineage4.9 | None | SRR1181250 | Other | lineage4.9 | None | SRR11972425 | Pre-XDR-TB | lineage2.2.1 | None | SRR1196478 | MDR-TB | lineage4.9 | None | SRR1184329 | MDR-TB | lineage4.9 | None | SRR14801720 | RR-TB | lineage4.8 | None | SRR12634609 | MDR-TB | lineage3.1.1 | None | SRR13423546 | Other | lineage4.4.2 | None | SRR15508556 | Other | lineage4.3.4.1 | None | SRR15316595 | RR-TB | lineage4.4.2 | None | SRR1792012 | Other | La1.8.1 | None | SRR1792011 | Other | La1.8.1 | None | SRR1792022 | Other | La1.8.1 | None | SRR1792025 | Other | La1.8.1 | None | SRR1792024 | Other | La1.8.1 | None | SRR21722120 | Sensitive | lineage4.1.2.1 | None | SRR18002977 | Sensitive | lineage2.2.1.1 | None | SRR21469200 | Other | La1.7.1 | None | SRR21686597 | Sensitive | lineage4.1.2.1 | None | SRR19303773 | Other | lineage4.6.2.2 | None | SRR2100067 | Other | lineage4.3.3 | None | SRR21469201 | Other | La1.7.1 | None | SRR22424851 | MDR-TB | lineage4.3.3 | None | SRR21726726 | Sensitive | lineage4.1.2.1 | None |
|---|
