EBG00000313325 - n.1474C>T


Drug resistance types
70 Sensitive 67 RR-TB 27 HR-TB 45 MDR-TB 24 Pre-XDR-TB 1 XDR-TB 173 Other
lineage Counts
lineage Count
lineage6.3.1 1
lineage4.1.2.1 17
lineage3.1.1 8
lineage6 1
lineage4.1.1.3.1 3
lineage4;lineage3 1
lineage4.9 50
lineage4.3.3 15
lineage4.8.2 2
lineage3 31
lineage4.8 40
lineage4.4.1.1 11
lineage1.1.2 7
lineage4.6.2.2 7
lineage2.2.1 49
lineage4.2.2.2 3
lineage4.3.4.2.1 9
lineage4.1.2 5
lineage4.1.1.3.1;lineage3.1.2 1
lineage4.3.4.1 5
lineage1.1.3.1 4
La3 1
lineage4.3.4.2 5
lineage4.1.1 6
14
lineage4.1.1.3 7
lineage4.3.2.1 7
lineage3.1.2.1 1
lineage3.1.2 2
lineage4.9;lineage4.2.1 1
lineage3.1 1
lineage4.3.1.1 3
lineage3.1.2.2 1
lineage1.2.2.2 4
lineage4 12
lineage4.2.1.1 2
lineage4.4.1.2 1
lineage4.4 1
lineage1.1.3.2 5
lineage1 1
lineage4;lineage2.2.1 1
lineage4.7 5
lineage2.2 4
lineage4.3 1
lineage4.5 4
La1.8.1 7
lineage4.6.1.1 1
lineage4.2.1 3
lineage4.4.2 3
lineage4.6 1
lineage4.3.4 2
lineage4.1.4 1
lineage4.9;La1.8.1 1
lineage4.9;La1.3 1
La1.2 2
lineage4.5;lineage2.2.1 1
lineage1.1.3.3 1
lineage5.1.1 1
lineage4.6.5 2
lineage1.1.1.1 1
lineage4.1.1.2 1
lineage4.9;lineage2.2 1
lineage4.8;lineage4.3.3 4
lineage4.4.1.1;lineage4.1.2.1 1
lineage2.2.2 1
La1.6 1
lineage1.1 1
La2 1
La1.7.1 3
lineage2.2.1.1 2
lineage1.2.1.2.1 1
lineage4.6.4 1
lineage3.1.3 1
spoligotype Counts
spoligotype Count
None 407
Geographic prevalence
Country level data for this variant is available for 7 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR4818440 Other lineage6.3.1 None
ERR4818930 Other lineage4.1.2.1 None
SRR5007155 HR-TB lineage4.1.2.1 None
ERR4818949 Sensitive lineage3.1.1 None
ERR4818574 Other lineage6 None
SRR5007161 RR-TB lineage4.1.1.3.1 None
SRR5007163 MDR-TB lineage4;lineage3 None
SRR5007168 RR-TB lineage4.9 None
ERR4818583 Other lineage4.3.3 None
SRR5007169 RR-TB lineage4.8.2 None
SRR5007193 RR-TB lineage4.1.1.3.1 None
ERR4818977 RR-TB lineage4.1.2.1 None
ERR4817584 MDR-TB lineage3 None
SAMEA3501067 RR-TB lineage4.8 None
ERR4819093 Other lineage4.3.3 None
ERR4819096 Other lineage4.4.1.1 None
ERR2513681 Other lineage1.1.2 None
ERR4820266 RR-TB lineage3 None
ERR2513830 RR-TB lineage4.8 None
ERR4820284 Other lineage4.9 None
ERR4819525 Other lineage3 None
ERR4819313 Other lineage3.1.1 None
ERR4819383 RR-TB lineage4.9 None
ERR4819423 Other lineage4.6.2.2 None
ERR4820369 Other lineage2.2.1 None
ERR4820338 Other lineage4.2.2.2 None
ERR4820742 Other lineage4.3.4.2.1 None
ERR2514305 Other lineage3 None
ERR4819533 Other lineage1.1.2 None
SRR2100877 HR-TB lineage4.1.2 None
ERR4820777 Other lineage4.1.2.1 None
ERR2514430 Other lineage4.1.1.3.1;lineage3.1.2 None
ERR2515854 Sensitive lineage2.2.1 None
ERR4819863 RR-TB lineage4.9 None
ERR2514645 Other lineage4.3.4.1 None
ERR4819842 Other lineage4.1.2.1 None
ERR4819772 RR-TB lineage1.1.3.1 None
SAMEA3501070 RR-TB lineage4.8 None
ERR2515013 Sensitive lineage2.2.1 None
ERR2514908 Sensitive lineage3 None
SRR6152980 HR-TB lineage4.8 ca
ERR4820194 Other La3 None
ERR4820622 Other lineage4.3.4.2 None
ERR4820030 Other lineage4.9 None
ERR4821796 Other lineage4.1.1 None
SAMEA3501046 RR-TB lineage4.8 None
SRR6046087 Other None
SAMEA3501052 RR-TB lineage4.8 None
ERR4821119 Other lineage4.4.1.1 None
ERR2660498 Sensitive lineage4.3.4.2.1 None
ERR2660441 Sensitive lineage1.1.3.1 None
SRR6045537 Pre-XDR-TB lineage2.2.1 None
ERR2660499 Sensitive lineage4.1.1.3 None
ERR270777 HR-TB lineage4.1.2 None
ERR4821172 RR-TB lineage4.9 None
ERR4821927 HR-TB lineage4.3.4.1 None
ERR4821229 Other lineage2.2.1 None
ERR4821222 Other lineage4.3.2.1 None
ERR4821409 Other lineage4.8 None
ERR4821276 Other lineage3 None
ERR4821974 Other lineage3 None
ERR4821272 RR-TB lineage4.1.2.1 None
ERR4821286 Other lineage4.8 None
ERR4822110 Other lineage3.1.2.1 None
ERR4821417 Other lineage1.1.3.1 None
ERR4822261 RR-TB lineage2.2.1 None
ERR4822217 Sensitive lineage4.3.4.1 None
SRR6045683 Other lineage3.1.2 None
ERR4821704 MDR-TB lineage4.3.3 None
ERR4821747 MDR-TB lineage4.9;lineage4.2.1 None
SRR5818670 Other lineage4.1.2.1 None
SRR6045778 Other lineage3.1 None
SRR6045805 Other lineage4.3.1.1 None
SRR6045909 Other lineage4.8 None
SRR6045843 Other lineage4.2.2.2 None
SRR6044873 Other lineage4.1.1.3.1 None
SRR6045017 Other lineage3.1.2.2 None
SRR6044993 Other lineage3 None
SRR6045002 MDR-TB lineage4.9 None
SRR6045071 Other lineage4.3.1.1 None
SRR6046484 Other lineage1.2.2.2 None
SRR6045992 Other lineage3 None
SRR6046208 Other lineage4 None
SRR6045289 Other None
SRR6045396 Other lineage4.3.1.1 None
ERR4828514 HR-TB lineage2.2.1 None
ERR4828879 MDR-TB lineage3 None
SRR6045138 Other lineage3.1.1 None
SRR6045158 Other lineage4.9 None
SRR6045399 Other None
SRR6046291 Other lineage3 None
SRR6046343 Other lineage2.2.1 None
ERR2851354 RR-TB lineage4.9 None
SRR6046541 Other lineage4.9 None
SRR6046497 Other lineage4.9 None
SRR6046743 Other lineage3 None
SRR6046534 Other lineage1.1.2 None
SRR6046733 Pre-XDR-TB lineage2.2.1 None
SRR6046907 Other lineage4.9 None
SRR6046852 MDR-TB lineage3 None
SRR6397815 Other lineage4.4.1.1 None
SRR6397640 Other lineage4.2.1.1 None
SRR6397733 Other lineage4.4.1.2 None
ERR502472 Other lineage4.6.2.2 None
SRR6982484 Sensitive lineage3.1.1 None
SRR6982078 Sensitive None
ERR502479 RR-TB lineage4.9 None
ERR502474 Pre-XDR-TB lineage4.9 None
ERR502478 RR-TB lineage4.9 None
ERR502473 Pre-XDR-TB lineage4.9 None
SRR6982102 Other lineage2.2.1 None
ERR502481 Pre-XDR-TB lineage4.9 None
ERR4872322 Pre-XDR-TB lineage2.2.1 None
SRR6856087 Sensitive lineage4 None
SRR6856119 Sensitive lineage2.2.1 None
SRR6982106 Sensitive lineage4.8 None
SRR6982104 Sensitive lineage2.2.1 None
SRR6896178 Sensitive lineage2.2.1 None
SRR6785301 Sensitive lineage2.2.1 None
SRR6982414 Sensitive lineage4.9 None
SRR6785281 Other lineage4.2.1.1 None
SRR6982195 RR-TB lineage4.4 None
SRR6896340 HR-TB lineage4.4.1.1 None
SRR6982175 Other lineage1.1.3.2 None
SRR6982198 HR-TB lineage1 None
SRR6982196 Sensitive None
SRR6982427 Sensitive lineage4.1.1 None
SRR6832582 HR-TB lineage2.2.1 None
SRR6832359 Sensitive lineage2.2.1 None
SRR6982227 Other lineage4.1.1 None
SRR6982229 Sensitive lineage2.2.1 None
SRR6982448 Sensitive lineage4;lineage2.2.1 None
SRR6982349 Sensitive lineage2.2.1 None
SRR6982337 Sensitive lineage4.7 None
SRR6982313 Sensitive lineage4.3.4.2.1 None
SRR6982328 HR-TB lineage3.1.1 None
SRR6855721 Sensitive lineage4.3.2.1 None
SRR6981939 Sensitive lineage4.3.4.2.1 None
SRR6981922 Sensitive lineage4.3.2.1 None
SRR6982363 Sensitive lineage4.3.3 None
SRR6982048 HR-TB lineage4.3.2.1 None
SRR6981975 Sensitive lineage4.7 None
SRR6981977 Sensitive lineage2.2.1 None
SRR6981993 Other lineage4.3.2.1 None
SRR6982035 Sensitive lineage4.9 None
SRR6982037 Sensitive lineage4.1.1 None
SRR6982043 Sensitive lineage4.4.1.1 None
SRR6982398 MDR-TB lineage2.2 None
SRR6981968 Sensitive lineage4.1.2 None
SRR6982385 Sensitive lineage4.1.2 None
SRR6982011 Other lineage4.1.1 None
SRR6982022 Sensitive lineage4.4.1.1 None
SRR6855915 Sensitive lineage4.9 None
SRR6855963 RR-TB lineage2.2.1 None
SRR6982057 Pre-XDR-TB lineage4.3 None
SRR6982050 Sensitive lineage4.3.4.1 None
SRR6982075 Sensitive lineage3 None
SRR6982058 HR-TB lineage2.2.1 None
ERR4816800 Other lineage4.8 gb
ERR4815816 Other lineage4.5 gb
SRR6856032 Sensitive lineage2.2.1 None
SRR6982076 Sensitive lineage4.9 None
SRR6982405 Sensitive None
SRR6982077 MDR-TB lineage4.3.2.1 None
ERR5087846 Other La1.8.1 None
SRR7535047 RR-TB lineage4.6.1.1 None
ERR5087486 Other La1.8.1 None
SRR7131123 Other lineage4.8 None
ERR5087596 Other La1.8.1 None
SRR6982514 Sensitive lineage4.3.3 None
SRR6982558 Other lineage4.3.4.2 None
SRR7755643 Pre-XDR-TB lineage4.2.1 None
SRR9971041 MDR-TB lineage4.3.3 None
SRR8651633 Pre-XDR-TB lineage4.4.2 None
SRR7645900 Sensitive lineage4.8 None
SRR8600288 Other La1.8.1 None
SRR9971080 RR-TB lineage2.2.1 None
SRR8651662 Pre-XDR-TB lineage2.2.1 None
ERR323068 Sensitive lineage4.9 None
SRR9971168 Other lineage4.3.2.1 None
ERR017781 Other lineage3 None
DRR034348 Other lineage2.2.1 None
DRR184629 Other lineage2.2.1 None
DRR184982 RR-TB lineage2.2.1 None
ERR037234 Sensitive lineage4.9 None
ERR019855 Other lineage3 None
ERR036207 Other lineage4.9 None
ERR1034647 MDR-TB lineage4.1.1.3 None
ERR10796574 Other lineage4.9 None
ERR10796563 Other lineage4.3.3 None
ERR10762248 MDR-TB lineage4.2.1 None
ERR10762495 MDR-TB lineage2.2.1 None
ERR10796564 Other lineage4.3.3 None
ERR1144989 Sensitive lineage4.8 None
ERR10796576 RR-TB lineage4.9 None
ERR10796580 RR-TB lineage4.6 None
ERR10796590 Other lineage4.9 None
ERR10796630 HR-TB None
ERR11044093 Other lineage3 None
ERR10796628 Other lineage4.3.3 None
ERR10796633 RR-TB lineage4.3.4 None
ERR4822150 Other lineage4.8 gb
ERR11049157 Other lineage3 None
ERR4820968 Sensitive lineage4.1.2.1 gb
ERR3283013 MDR-TB lineage4 None
ERR3324351 MDR-TB lineage4.1.4 None
ERR3324325 MDR-TB lineage4.6.2.2 None
ERR3439489 RR-TB La1.8.1 None
ERR4769525 Sensitive lineage4.9 None
ERR3470663 Sensitive lineage3 None
ERR4024582 MDR-TB lineage4.1.2.1 None
ERR4187671 Other lineage4.9;La1.8.1 None
ERR4769424 Sensitive lineage4.9 None
ERR3797043 HR-TB None
ERR4187652 Other lineage4.9 None
ERR4457829 MDR-TB lineage4.1.2.1 None
ERR4769502 RR-TB lineage4.9;La1.3 None
ERR4769553 RR-TB lineage4.9 None
ERR4772206 Other La1.2 None
ERR2514801 Other lineage1.1.3.2 gb
ERR4811708 HR-TB lineage4 None
ERR4811035 Pre-XDR-TB lineage4.5;lineage2.2.1 None
ERR2514173 Other lineage4.5 gb
ERR4798769 Other lineage1.1.3.3 None
ERR5917985 MDR-TB lineage2.2.1 None
ERR6358979 Other None
ERR6197028 Other lineage4.9 None
ERR751345 Other lineage5.1.1 None
ERR6359064 Sensitive lineage4.9 None
ERR736816 Other lineage4.9 None
ERR7801175 RR-TB lineage4.6.5 None
ERR752012 HR-TB lineage1.1.1.1 None
ERR8975044 Other lineage4.1.1.2 None
ERR7801314 Sensitive lineage4.3.4.2 None
ERR7801176 RR-TB lineage4.6.5 None
ERR7821182 Other lineage1.1.3.2 None
ERR212114 Other lineage4.3.4.2.1 None
ERR9786164 RR-TB lineage4.1.1.3 None
ERR9117681 Other lineage4.3.3 None
ERR9117827 Other lineage1.2.2.2 None
ERR970449 RR-TB lineage4.1.1.3 None
ERR9117676 Other lineage4.2.2.2 None
ERR9117759 Other lineage3 None
SRR1019127 Other lineage4.9;lineage2.2 None
ERR9786498 Sensitive lineage4.1.2.1 None
ERR987707 MDR-TB lineage4.7 None
ERR9992879 XDR-TB lineage4.3.3 None
SRR023450 RR-TB lineage2.2.1 None
SRR023487 RR-TB lineage2.2.1 None
SRR1049559 MDR-TB lineage4.3.4.2.1 None
SRR1049560 MDR-TB lineage4.3.4.2.1 None
SRR1049676 MDR-TB lineage4.8;lineage4.3.3 None
SRR1049672 Other lineage3 None
SRR1049673 Pre-XDR-TB lineage3 None
SRR1049725 RR-TB lineage4.1.2.1 None
SRR1049677 MDR-TB lineage4.8;lineage4.3.3 None
SRR1062871 MDR-TB lineage4.3.4.2.1 None
SRR1049726 MDR-TB lineage4.4.1.1;lineage4.1.2.1 None
SRR10869071 MDR-TB lineage2.2.1 None
SRR1062920 MDR-TB lineage4.8;lineage4.3.3 None
SRR1062928 RR-TB lineage4 None
SRR1062918 Pre-XDR-TB lineage3 None
SRR10869086 Pre-XDR-TB lineage2.2.2 None
SRR1173170 Other lineage4.9 None
SRR10993951 RR-TB La1.6 None
SRR1140574 MDR-TB lineage4.8;lineage4.3.3 None
SRR1140716 Pre-XDR-TB lineage3 None
SRR1140736 RR-TB None
SRR1140753 MDR-TB lineage4.3.4.2.1 None
SRR1173113 RR-TB lineage4.3.4 None
SRR1173185 HR-TB lineage4.9 None
SRR1173421 RR-TB lineage4.9 None
SRR1173281 RR-TB lineage3 None
SRR1173450 RR-TB lineage4.9 None
SRR1173740 Other None
SRR1173833 Other lineage4.9 None
SRR1173770 Other lineage4.9 None
SRR1175473 Other lineage4.9 None
SRR1175474 HR-TB lineage4.9 None
SRR1175491 MDR-TB lineage4 None
SRR1175472 MDR-TB lineage4 None
SRR1184329 MDR-TB lineage4.9 None
SRR1196478 MDR-TB lineage4.9 None
SRR11972188 MDR-TB lineage2.2.1 None
SRR11972311 Pre-XDR-TB None
SRR11972425 Pre-XDR-TB lineage2.2.1 None
SRR11972323 RR-TB lineage1.1.3.2 None
SRR11972417 MDR-TB lineage2.2.1 None
SRR12199474 Sensitive lineage1.1 None
SRR12199409 Other lineage1.2.2.2 None
SRR12634609 MDR-TB lineage3.1.1 None
SRR13888750 Other La2 None
SRR13199734 Other La1.2 None
SRR13423546 Other lineage4.4.2 None
SRR14165135 Sensitive lineage4.3.4.2 None
SRR15508556 Other lineage4.3.4.1 None
SRR14334195 Pre-XDR-TB lineage2.2.1 None
SRR15316595 RR-TB lineage4.4.2 None
SRR14801720 RR-TB lineage4.8 None
ERR11050610 HR-TB lineage3 None
SRR1792011 Other La1.8.1 None
SRR1735596 RR-TB lineage4.9 None
SRR18213721 Other lineage4.8 None
SRR1792022 Other La1.8.1 None
SRR18002872 Pre-XDR-TB lineage2.2.1 None
SRR18003047 MDR-TB lineage2.2.1 None
SRR2101681 Sensitive lineage4.8 None
SRR18213736 MDR-TB lineage3 None
SRR2101617 Other lineage4.1.1 None
SRR18213800 Other lineage3.1.2 None
SRR18391772 Other La1.7.1 None
SRR2101663 Other lineage1.1.3.2 None
SRR2101693 Sensitive lineage4.1.2 None
SRR21240064 Sensitive lineage4.3.3 None
SRR2101774 Sensitive lineage2.2.1 None
SRR2101786 Sensitive lineage4.4.1.1 None
SRR2101802 Sensitive lineage4.4.1.1 None
SRR21675637 Sensitive lineage4.3.3 None
SRR21277822 Sensitive lineage2.2.1.1 None
SRR21469200 Other La1.7.1 None
SRR21469201 Other La1.7.1 None
SRR21714045 HR-TB lineage2.2.1 None
SRR21728726 HR-TB lineage1.2.1.2.1 None
SRR22424851 MDR-TB lineage4.3.3 None
SRR21737226 Sensitive lineage4.5 None
ERR4815772 Other lineage4.4.1.1 None
SAMEA3501065 RR-TB lineage4.8 None
ERR4815118 Other lineage2.2 None
ERR4815121 HR-TB lineage4.6.2.2 None
ERR4815193 MDR-TB lineage4.8 None
ERR4815795 Other lineage1.1.2 None
SRR5485415 RR-TB None
ERR4814312 Other lineage4 None
SRR3675491 Other lineage4.7 None
SRR3619841 Pre-XDR-TB lineage2.2.1 None
ERR2229111 Sensitive lineage4.8 None
SRR3601585 Pre-XDR-TB lineage2.2 None
ERR4814623 Other lineage4.8 None
SRR3619764 Pre-XDR-TB lineage2.2 None
ERR4814617 Other lineage1.1.3.1 None
ERR1679639 Other lineage4.6.4 None
SRR3618864 Pre-XDR-TB lineage2.2.1 None
SRR3675219 Other lineage4.9 None
ERR1750889 Other lineage4.4.1.1 None
ERR1665402 MDR-TB lineage2.2.1 None
ERR4814821 Other lineage2.2.1 None
ERR1750916 Other lineage2.2.1.1 None
SRR3675236 HR-TB None
ERR4814748 Other lineage4.8 None
ERR4814754 Sensitive lineage4.6.2.2 None
ERR4815517 Other lineage1.2.2.2 None
SAMEA3501073 RR-TB lineage4.8 None
ERR4815551 Other lineage2.2.1 None
ERR4814874 MDR-TB lineage1.1.2 None
ERR4813263 MDR-TB lineage4.8 None
ERR2228965 Other lineage4.8 None
ERR4815577 Other lineage3.1.3 None
ERR4815849 Other lineage3.1.1 None
ERR4815957 HR-TB lineage4.2.1 None
SAMEA3501015 Other lineage4.8 None
ERR4817464 Other lineage3.1.1 None
ERR4816464 Other lineage3 None
SRR3675527 RR-TB lineage4.9 None
ERR4816334 Other lineage4.6.2.2 None
ERR4816429 Other lineage1.1.2 None
SRR3675547 Other lineage4.9 None
ERR2027257 Other lineage4.1.2.1 None
ERR2229147 Other lineage4.8 None
ERR4816745 Pre-XDR-TB lineage2.2.1 None
ERR4817127 Other lineage4.1.2.1 None
ERR2229233 Sensitive lineage4 None
ERR2229234 RR-TB lineage4.8 None
ERR4816549 Other lineage2.2.1 None
ERR4816610 RR-TB lineage4.3.3 None
ERR4817189 Other lineage4.7 None
ERR2229366 Other lineage4.8 None
ERR4817204 RR-TB lineage4.9 None
ERR4816702 RR-TB lineage4.6.2.2 None
ERR4816818 Other lineage4.8.2 None
ERR4816755 Other lineage4.1.1.3 None
ERR2229435 HR-TB lineage4.8 None
ERR2229436 Other lineage4.8 None
ERR2229801 Other lineage4 None
ERR2228810 RR-TB lineage4 None
SAMN02380982 MDR-TB lineage4.3.4.2 None
ERR2228815 RR-TB lineage4.8 None
ERR2228838 RR-TB lineage4.8 None
ERR2228890 Other lineage4 None
ERR2228910 Other lineage4.8 None
ERR4818663 Other lineage3 None
ERR2228899 RR-TB lineage4.8 None
ERR2228900 RR-TB lineage4.8 None
ERR4817710 Other lineage1.1.2 None
ERR2513382 RR-TB lineage4.1.1.3 None
ERR4818726 Other lineage4.1.2.1 None
ERR4817915 RR-TB lineage4.9 None
ERR4817917 Other lineage2.2.1 None
ERR4819002 HR-TB lineage4.8 None
ERR4819017 RR-TB lineage3 None
SAMEA3450033 Other lineage4.8 None
ERR2513401 HR-TB lineage3 None
ERR2512423 Other lineage4.1.1.3 None
ERR4818188 Other lineage4.1.2.1 None
ERR2513223 Other lineage4.1.2.1 None
ERR4818851 RR-TB lineage4.4.1.1 None
SAMEA3501063 RR-TB lineage4.8 None
ERR2179695 Sensitive lineage4.5 None