EBG00000313325 - n.991G>A


Drug resistance types
52 Sensitive 29 RR-TB 29 HR-TB 11 MDR-TB 18 Pre-XDR-TB 0 XDR-TB 104 Other
lineage Counts
lineage Count
lineage2.2.1 22
lineage4.1.2.1 11
lineage4 16
lineage4.9 82
6
lineage4.1.2 2
lineage3.1 1
lineage3 20
lineage3.1.3 3
lineage1.1.2 2
lineage3.1.2.1 3
lineage4.6.2.2 1
lineage4.4.1.1 4
lineage4.3.3 4
lineage4.8 10
lineage4.3.2 1
lineage4.5 2
lineage4.1.1.3 3
lineage1.1.1 2
La3 1
lineage1.1.3.1 1
lineage4.8.2 1
lineage4.3.4.2.1 1
lineage1.1.1.1 1
lineage4.3.4.1 1
lineage4.2.1.1 1
lineage2.2.1.1 2
lineage4.7 2
lineage4.6.1.1 1
lineage4.2.1 2
lineage4.8.1 1
lineage2.2.2 2
lineage4.3.4.2 1
lineage4.9;lineage1.1 1
La1.8.1 2
La1.3 7
La1.2 1
lineage4.9;La1.3 4
lineage1.1.3.3 1
lineage4.4.2 3
lineage4.5;lineage2.2.1 1
lineage6 1
lineage4.6.1.2 1
La1.6 1
lineage4.4.1.1.1 2
lineage2 1
lineage2.2 1
La2 1
La1.4 1
lineage1.2.1.2 1
spoligotype Counts
spoligotype Count
None 243
Geographic prevalence
Country level data for this variant is available for 17 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR3619841 Pre-XDR-TB lineage2.2.1 None
SRR3618864 Pre-XDR-TB lineage2.2.1 None
ERR4815714 Sensitive lineage4.1.2.1 gb
ERR1750908 Sensitive lineage4 None
ERR4815471 Other lineage4.9 None
ERR1750907 RR-TB None
SRR3675245 Other lineage4.1.2.1 None
ERR4814976 Other lineage4.9 None
ERR1750944 Other lineage4.1.2 za
ERR2027290 RR-TB lineage3.1 None
ERR4816964 Other lineage4.9 None
ERR4815556 RR-TB lineage3 None
ERR2027220 Other lineage3.1.3 None
ERR4816322 Other lineage4.9 None
ERR4817069 RR-TB None
ERR4817070 Other lineage1.1.2 None
ERR4816470 Other lineage3 None
ERR4816417 Other lineage4.9 None
ERR2446509 Other lineage3 nl
ERR4818646 Sensitive lineage4.1.2.1 None
SAMN02599156 HR-TB lineage3.1.2.1 None
ERR216965 HR-TB lineage4.9 None
SRR3742667 Sensitive lineage4.9 None
ERR4816702 RR-TB lineage4.6.2.2 None
ERR4816717 RR-TB lineage3.1.2.1 None
ERR4816852 Other lineage4.9 None
ERR4816868 Other lineage4.4.1.1 None
ERR4817109 Other lineage3 None
ERR3275709 HR-TB lineage3 nl
ERR4816569 Other lineage4.3.3 gb
ERR4818710 Sensitive lineage4.9 None
ERR4817667 HR-TB lineage4.8 None
ERR4818272 Other lineage4.3.2 None
ERR4818104 Other lineage4.1.2 gb
ERR4818831 Other lineage3 None
ERR4818432 HR-TB lineage4.5 gb
ERR2512599 Other lineage3 gb
ERR2513229 MDR-TB lineage2.2.1 None
ERR2513259 Other lineage3 None
ERR4818536 Other lineage4.9 None
ERR2503533 Other lineage4.1.2.1 fi
ERR4819175 Other lineage4.1.1.3 gb
ERR4818952 Other lineage3 None
ERR2513910 Other lineage3 gb
ERR4819383 RR-TB lineage4.9 None
ERR4819314 Other lineage1.1.1 None
ERR4819357 Other lineage4.9 None
ERR4820484 Other lineage4.8 None
ERR4819546 HR-TB lineage3 None
ERR4819462 Other lineage4 None
ERR2514215 Other lineage2.2.1 gb
SRR5341267 Pre-XDR-TB lineage3 None
ERR4819933 Other lineage4.9 None
ERR4819863 RR-TB lineage4.9 None
ERR4820030 Other lineage4.9 None
ERR4820586 Other lineage3 gb
ERR4821769 Other lineage4.1.2.1 None
ERR4820193 Other lineage3 None
SRR6046141 Other lineage4.9 None
ERR4821811 RR-TB lineage4.9 None
ERR4822138 Other lineage4.1.2.1 None
ERR4821802 Other La3 gb
ERR4821172 RR-TB lineage4.9 None
ERR4821616 Other lineage1.1.3.1 None
ERR4821725 Other lineage4.8.2 gb
SRR5818448 Other lineage4.9 None
SRR5818464 Other lineage4.9 None
SRR6045832 HR-TB lineage4.9 None
SRR5818647 RR-TB lineage4.3.4.2.1 None
SRR6044952 RR-TB lineage4.9 None
SRR6045124 Other lineage4.9 None
SRR6044958 Other lineage4.4.1.1 None
SRR6045191 Sensitive lineage4.9 None
SRR6045359 Sensitive lineage4.9 None
ERR2851356 Sensitive lineage4.9 None
SRR6046250 Other lineage4.9 None
SRR6046385 Other lineage4.9 None
SRR6046376 Other lineage3 None
ERR323037 HR-TB lineage4 None
SRR6046612 Other lineage1.1.1.1 None
ERR502470 RR-TB lineage4.9 None
ERR485006 HR-TB lineage4.9 None
ERR502473 Pre-XDR-TB lineage4.9 None
ERR502478 RR-TB lineage4.9 None
ERR2984800 Pre-XDR-TB lineage4.3.4.1 None
SRR6785281 Other lineage4.2.1.1 None
SRR6982192 Sensitive lineage4.1.1.3 None
SRR6982246 Sensitive lineage4 None
SRR6982239 HR-TB lineage4.1.1.3 None
SRR6832644 Other lineage4.3.3 None
ERR4831863 HR-TB lineage2.2.1.1 None
SRR9971080 RR-TB lineage2.2.1 None
ERR3275190 Other lineage3 nl
SRR7131195 Other lineage2.2.1 None
SRR7496471 Sensitive None
SRR7496523 Other lineage4.7 None
SRR7535047 RR-TB lineage4.6.1.1 None
SRR7131145 Other lineage4.1.2.1 None
SRR9971270 RR-TB lineage2.2.1 None
SRR7755654 Pre-XDR-TB lineage4.2.1 None
SRR8651616 MDR-TB lineage2.2.1 None
SRR9971150 RR-TB lineage4.8.1 None
ERR10796594 Other lineage4.9 None
DRR185024 Other lineage2.2.2 None
ERR067712 HR-TB lineage4 None
ERR10219876 Other lineage4.3.4.2 None
ERR10762291 MDR-TB lineage2.2.1 None
ERR10796553 Other lineage4.9;lineage1.1 None
ERR10762495 MDR-TB lineage2.2.1 None
DRR184982 RR-TB lineage2.2.1 None
ERR1063855 Other lineage4 None
ERR10796559 Other lineage4.9 None
ERR3439265 Other lineage4.9 None
ERR10796597 Other lineage4 None
ERR10796630 HR-TB None
ERR10796632 Other lineage4.3.3 None
ERR3283013 MDR-TB lineage4 None
ERR3283033 Sensitive lineage4.9 None
ERR3439441 Other La1.8.1 None
ERR4596910 Sensitive lineage4 None
ERR4178161 Other lineage4.4.1.1 None
ERR473323 HR-TB lineage4.9 None
ERR4769417 Pre-XDR-TB lineage4.9 None
ERR473334 HR-TB lineage4.9 None
ERR4769419 Other lineage4.9 None
ERR4769408 Other La1.3 None
ERR4769444 HR-TB lineage4.9 None
ERR4769418 Other La1.2 None
ERR4769433 Pre-XDR-TB lineage4.9 None
ERR4769442 HR-TB lineage4 None
ERR4769446 Sensitive lineage4.9;La1.3 None
ERR4769508 RR-TB lineage4.9 None
ERR4769506 Sensitive La1.3 None
ERR4769493 Pre-XDR-TB lineage4.9;La1.3 None
ERR4769514 Other La1.3 None
ERR4769516 Other La1.3 None
ERR4769547 Sensitive lineage4.9;La1.3 None
ERR4769517 Other La1.3 None
ERR4769530 RR-TB lineage4.9 None
ERR4769518 Sensitive lineage4.9 None
ERR4769539 Sensitive lineage4.9 None
ERR4769550 Other lineage4.9;La1.3 None
ERR4769552 Other La1.3 None
ERR4769555 Other La1.3 None
ERR4796577 MDR-TB None
ERR4796472 Pre-XDR-TB lineage2.2.1 None
ERR4798823 HR-TB lineage4 None
ERR4798769 Other lineage1.1.3.3 None
ERR6197028 Other lineage4.9 None
ERR4811101 Other lineage4.4.2 None
ERR6197024 RR-TB lineage4.9 None
ERR4811035 Pre-XDR-TB lineage4.5;lineage2.2.1 None
ERR6197034 Other lineage4.9 None
ERR6197030 Other lineage4.9 None
ERR6358951 HR-TB lineage4 None
ERR6866125 Sensitive lineage4.1.2.1 None
ERR6359066 HR-TB lineage4 None
ERR6359070 Other lineage4.9 None
ERR6359069 Other lineage4.9 None
ERR6359074 HR-TB lineage4.9 None
ERR6865446 Other lineage4.4.1.1 None
ERR736831 HR-TB lineage4.9 None
ERR736837 Other lineage4.9 None
ERR894432 Sensitive lineage4.8 None
ERR894435 Sensitive lineage4.8 es
ERR894434 Sensitive lineage4.8 None
ERR9117826 Other lineage3.1.3 None
ERR894433 Sensitive lineage4.8 None
ERR9117747 HR-TB lineage4.8 None
ERR9786076 Sensitive lineage3 None
ERR9786276 Sensitive lineage4.8 None
SRR10315551 Sensitive lineage2.2.1 None
ERR9787336 Other lineage6 None
ERR987707 MDR-TB lineage4.7 None
SRR10315558 Sensitive lineage2.2.1 None
SRR1049725 RR-TB lineage4.1.2.1 None
SRR10315751 MDR-TB lineage4.8 None
SRR1062880 MDR-TB lineage4.6.1.2 None
SRR1062928 RR-TB lineage4 None
SRR1172885 HR-TB lineage4.9 None
SRR10993951 RR-TB La1.6 None
SRR11349145 Pre-XDR-TB lineage4.4.1.1.1 None
SRR11349211 Pre-XDR-TB lineage4.3.3 None
SRR11462861 Other La1.8.1 None
SRR1173170 Other lineage4.9 None
SRR1172987 HR-TB lineage4.9 None
SRR1175512 Sensitive lineage4.9 None
SRR1173281 RR-TB lineage3 None
SRR1173740 Other None
SRR1175173 HR-TB lineage3.1.2.1 None
SRR1173770 Other lineage4.9 None
SRR1175052 HR-TB lineage4.9 None
SRR1175487 Sensitive lineage4.9 None
SRR1175506 Sensitive lineage4.9 None
SRR1175513 Other lineage4.9 None
SRR1180148 Sensitive lineage4.9 None
SRR1181390 Sensitive lineage2 None
SRR1180250 Other lineage4.9 None
SRR1180300 Sensitive lineage4.9 None
SRR1180319 Sensitive lineage4.9 None
SRR1181237 Sensitive lineage2.2 None
SRR1181349 Sensitive lineage4.4.1.1.1 None
SRR1180312 Sensitive lineage4.9 None
SRR1180345 Other lineage4.9 None
SRR1180355 Sensitive lineage4.9 None
SRR1180413 Sensitive lineage4.9 None
SRR1180420 Sensitive lineage4.9 None
SRR1180444 Sensitive lineage4.9 None
SRR1180977 Sensitive lineage4.9 None
SRR1181283 Sensitive lineage4.9 None
SRR1181402 Sensitive lineage4.9 None
SRR11972327 Pre-XDR-TB lineage2.2.1 None
SRR1183054 Sensitive lineage4.9 None
SRR11972300 MDR-TB lineage2.2.1 None
SRR13888750 Other La2 None
SRR11972425 Pre-XDR-TB lineage2.2.1 None
SRR13423546 Other lineage4.4.2 None
SRR13180204 Sensitive lineage3 None
SRR21677886 Sensitive lineage4.9 None
SRR15316595 RR-TB lineage4.4.2 None
SRR17406768 Sensitive lineage1.1.2 None
SRR18002974 Pre-XDR-TB lineage2.2.1 None
SRR18002981 Other lineage2.2.1 None
SRR18002998 Pre-XDR-TB lineage2.2.2 None
SRR18003031 HR-TB lineage2.2.1 None
SRR18213909 Other lineage4.1.2.1 None
SRR21240055 Other lineage4.1.2.1 None
SRR21658550 Other lineage1.1.1 None
SRR14801325 Pre-XDR-TB lineage4.2.1 None
SRR16156188 HR-TB lineage4.9 None
SRR16156775 Other lineage4.9 None
SRR16278274 Other La1.4 None
SRR18003049 Other lineage2.2.1 None
SRR18913742 Sensitive lineage3.1.3 None
SRR18913779 Other lineage3 None
SRR19303820 RR-TB lineage4.8 None
SRR20632814 Sensitive lineage4 None
SRR20969475 Other lineage1.2.1.2 None
SRR21713567 Sensitive lineage4.5 None
SRR22424778 RR-TB lineage2.2.1.1 None
SRR21727760 Other lineage2.2.1 None
SRR22424765 MDR-TB lineage4 None
SRR22424787 Sensitive lineage4.9 None