EBG00000313325 - n.991G>A
Drug resistance types
52 Sensitive
29 RR-TB
29 HR-TB
11 MDR-TB
18 Pre-XDR-TB
0 XDR-TB
104 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage2.2.1 | 22 |
| lineage4.1.2.1 | 11 |
| lineage4 | 16 |
| lineage4.9 | 82 |
| 6 | |
| lineage4.1.2 | 2 |
| lineage3.1 | 1 |
| lineage3 | 20 |
| lineage3.1.3 | 3 |
| lineage1.1.2 | 2 |
| lineage3.1.2.1 | 3 |
| lineage4.6.2.2 | 1 |
| lineage4.4.1.1 | 4 |
| lineage4.3.3 | 4 |
| lineage4.8 | 10 |
| lineage4.3.2 | 1 |
| lineage4.5 | 2 |
| lineage4.1.1.3 | 3 |
| lineage1.1.1 | 2 |
| La3 | 1 |
| lineage1.1.3.1 | 1 |
| lineage4.8.2 | 1 |
| lineage4.3.4.2.1 | 1 |
| lineage1.1.1.1 | 1 |
| lineage4.3.4.1 | 1 |
| lineage4.2.1.1 | 1 |
| lineage2.2.1.1 | 2 |
| lineage4.7 | 2 |
| lineage4.6.1.1 | 1 |
| lineage4.2.1 | 2 |
| lineage4.8.1 | 1 |
| lineage2.2.2 | 2 |
| lineage4.3.4.2 | 1 |
| lineage4.9;lineage1.1 | 1 |
| La1.8.1 | 2 |
| La1.3 | 7 |
| La1.2 | 1 |
| lineage4.9;La1.3 | 4 |
| lineage1.1.3.3 | 1 |
| lineage4.4.2 | 3 |
| lineage4.5;lineage2.2.1 | 1 |
| lineage6 | 1 |
| lineage4.6.1.2 | 1 |
| La1.6 | 1 |
| lineage4.4.1.1.1 | 2 |
| lineage2 | 1 |
| lineage2.2 | 1 |
| La2 | 1 |
| La1.4 | 1 |
| lineage1.2.1.2 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 243 |
Geographic prevalence
Country level data for this variant is available for 17 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR3619841 | Pre-XDR-TB | lineage2.2.1 | None | SRR3618864 | Pre-XDR-TB | lineage2.2.1 | None | ERR4815714 | Sensitive | lineage4.1.2.1 | gb | ERR1750908 | Sensitive | lineage4 | None | ERR4815471 | Other | lineage4.9 | None | ERR1750907 | RR-TB | None | SRR3675245 | Other | lineage4.1.2.1 | None | ERR4814976 | Other | lineage4.9 | None | ERR1750944 | Other | lineage4.1.2 | za | ERR2027290 | RR-TB | lineage3.1 | None | ERR4816964 | Other | lineage4.9 | None | ERR4815556 | RR-TB | lineage3 | None | ERR2027220 | Other | lineage3.1.3 | None | ERR4816322 | Other | lineage4.9 | None | ERR4817069 | RR-TB | None | ERR4817070 | Other | lineage1.1.2 | None | ERR4816470 | Other | lineage3 | None | ERR4816417 | Other | lineage4.9 | None | ERR2446509 | Other | lineage3 | nl | ERR4818646 | Sensitive | lineage4.1.2.1 | None | SAMN02599156 | HR-TB | lineage3.1.2.1 | None | ERR216965 | HR-TB | lineage4.9 | None | SRR3742667 | Sensitive | lineage4.9 | None | ERR4816702 | RR-TB | lineage4.6.2.2 | None | ERR4816717 | RR-TB | lineage3.1.2.1 | None | ERR4816852 | Other | lineage4.9 | None | ERR4816868 | Other | lineage4.4.1.1 | None | ERR4817109 | Other | lineage3 | None | ERR3275709 | HR-TB | lineage3 | nl | ERR4816569 | Other | lineage4.3.3 | gb | ERR4818710 | Sensitive | lineage4.9 | None | ERR4817667 | HR-TB | lineage4.8 | None | ERR4818272 | Other | lineage4.3.2 | None | ERR4818104 | Other | lineage4.1.2 | gb | ERR4818831 | Other | lineage3 | None | ERR4818432 | HR-TB | lineage4.5 | gb | ERR2512599 | Other | lineage3 | gb | ERR2513229 | MDR-TB | lineage2.2.1 | None | ERR2513259 | Other | lineage3 | None | ERR4818536 | Other | lineage4.9 | None | ERR2503533 | Other | lineage4.1.2.1 | fi | ERR4819175 | Other | lineage4.1.1.3 | gb | ERR4818952 | Other | lineage3 | None | ERR2513910 | Other | lineage3 | gb | ERR4819383 | RR-TB | lineage4.9 | None | ERR4819314 | Other | lineage1.1.1 | None | ERR4819357 | Other | lineage4.9 | None | ERR4820484 | Other | lineage4.8 | None | ERR4819546 | HR-TB | lineage3 | None | ERR4819462 | Other | lineage4 | None | ERR2514215 | Other | lineage2.2.1 | gb | SRR5341267 | Pre-XDR-TB | lineage3 | None | ERR4819933 | Other | lineage4.9 | None | ERR4819863 | RR-TB | lineage4.9 | None | ERR4820030 | Other | lineage4.9 | None | ERR4820586 | Other | lineage3 | gb | ERR4821769 | Other | lineage4.1.2.1 | None | ERR4820193 | Other | lineage3 | None | SRR6046141 | Other | lineage4.9 | None | ERR4821811 | RR-TB | lineage4.9 | None | ERR4822138 | Other | lineage4.1.2.1 | None | ERR4821802 | Other | La3 | gb | ERR4821172 | RR-TB | lineage4.9 | None | ERR4821616 | Other | lineage1.1.3.1 | None | ERR4821725 | Other | lineage4.8.2 | gb | SRR5818448 | Other | lineage4.9 | None | SRR5818464 | Other | lineage4.9 | None | SRR6045832 | HR-TB | lineage4.9 | None | SRR5818647 | RR-TB | lineage4.3.4.2.1 | None | SRR6044952 | RR-TB | lineage4.9 | None | SRR6045124 | Other | lineage4.9 | None | SRR6044958 | Other | lineage4.4.1.1 | None | SRR6045191 | Sensitive | lineage4.9 | None | SRR6045359 | Sensitive | lineage4.9 | None | ERR2851356 | Sensitive | lineage4.9 | None | SRR6046250 | Other | lineage4.9 | None | SRR6046385 | Other | lineage4.9 | None | SRR6046376 | Other | lineage3 | None | ERR323037 | HR-TB | lineage4 | None | SRR6046612 | Other | lineage1.1.1.1 | None | ERR502470 | RR-TB | lineage4.9 | None | ERR485006 | HR-TB | lineage4.9 | None | ERR502473 | Pre-XDR-TB | lineage4.9 | None | ERR502478 | RR-TB | lineage4.9 | None | ERR2984800 | Pre-XDR-TB | lineage4.3.4.1 | None | SRR6785281 | Other | lineage4.2.1.1 | None | SRR6982192 | Sensitive | lineage4.1.1.3 | None | SRR6982246 | Sensitive | lineage4 | None | SRR6982239 | HR-TB | lineage4.1.1.3 | None | SRR6832644 | Other | lineage4.3.3 | None | ERR4831863 | HR-TB | lineage2.2.1.1 | None | SRR9971080 | RR-TB | lineage2.2.1 | None | ERR3275190 | Other | lineage3 | nl | SRR7131195 | Other | lineage2.2.1 | None | SRR7496471 | Sensitive | None | SRR7496523 | Other | lineage4.7 | None | SRR7535047 | RR-TB | lineage4.6.1.1 | None | SRR7131145 | Other | lineage4.1.2.1 | None | SRR9971270 | RR-TB | lineage2.2.1 | None | SRR7755654 | Pre-XDR-TB | lineage4.2.1 | None | SRR8651616 | MDR-TB | lineage2.2.1 | None | SRR9971150 | RR-TB | lineage4.8.1 | None | ERR10796594 | Other | lineage4.9 | None | DRR185024 | Other | lineage2.2.2 | None | ERR067712 | HR-TB | lineage4 | None | ERR10219876 | Other | lineage4.3.4.2 | None | ERR10762291 | MDR-TB | lineage2.2.1 | None | ERR10796553 | Other | lineage4.9;lineage1.1 | None | ERR10762495 | MDR-TB | lineage2.2.1 | None | DRR184982 | RR-TB | lineage2.2.1 | None | ERR1063855 | Other | lineage4 | None | ERR10796559 | Other | lineage4.9 | None | ERR3439265 | Other | lineage4.9 | None | ERR10796597 | Other | lineage4 | None | ERR10796630 | HR-TB | None | ERR10796632 | Other | lineage4.3.3 | None | ERR3283013 | MDR-TB | lineage4 | None | ERR3283033 | Sensitive | lineage4.9 | None | ERR3439441 | Other | La1.8.1 | None | ERR4596910 | Sensitive | lineage4 | None | ERR4178161 | Other | lineage4.4.1.1 | None | ERR473323 | HR-TB | lineage4.9 | None | ERR4769417 | Pre-XDR-TB | lineage4.9 | None | ERR473334 | HR-TB | lineage4.9 | None | ERR4769419 | Other | lineage4.9 | None | ERR4769408 | Other | La1.3 | None | ERR4769444 | HR-TB | lineage4.9 | None | ERR4769418 | Other | La1.2 | None | ERR4769433 | Pre-XDR-TB | lineage4.9 | None | ERR4769442 | HR-TB | lineage4 | None | ERR4769446 | Sensitive | lineage4.9;La1.3 | None | ERR4769508 | RR-TB | lineage4.9 | None | ERR4769506 | Sensitive | La1.3 | None | ERR4769493 | Pre-XDR-TB | lineage4.9;La1.3 | None | ERR4769514 | Other | La1.3 | None | ERR4769516 | Other | La1.3 | None | ERR4769547 | Sensitive | lineage4.9;La1.3 | None | ERR4769517 | Other | La1.3 | None | ERR4769530 | RR-TB | lineage4.9 | None | ERR4769518 | Sensitive | lineage4.9 | None | ERR4769539 | Sensitive | lineage4.9 | None | ERR4769550 | Other | lineage4.9;La1.3 | None | ERR4769552 | Other | La1.3 | None | ERR4769555 | Other | La1.3 | None | ERR4796577 | MDR-TB | None | ERR4796472 | Pre-XDR-TB | lineage2.2.1 | None | ERR4798823 | HR-TB | lineage4 | None | ERR4798769 | Other | lineage1.1.3.3 | None | ERR6197028 | Other | lineage4.9 | None | ERR4811101 | Other | lineage4.4.2 | None | ERR6197024 | RR-TB | lineage4.9 | None | ERR4811035 | Pre-XDR-TB | lineage4.5;lineage2.2.1 | None | ERR6197034 | Other | lineage4.9 | None | ERR6197030 | Other | lineage4.9 | None | ERR6358951 | HR-TB | lineage4 | None | ERR6866125 | Sensitive | lineage4.1.2.1 | None | ERR6359066 | HR-TB | lineage4 | None | ERR6359070 | Other | lineage4.9 | None | ERR6359069 | Other | lineage4.9 | None | ERR6359074 | HR-TB | lineage4.9 | None | ERR6865446 | Other | lineage4.4.1.1 | None | ERR736831 | HR-TB | lineage4.9 | None | ERR736837 | Other | lineage4.9 | None | ERR894432 | Sensitive | lineage4.8 | None | ERR894435 | Sensitive | lineage4.8 | es | ERR894434 | Sensitive | lineage4.8 | None | ERR9117826 | Other | lineage3.1.3 | None | ERR894433 | Sensitive | lineage4.8 | None | ERR9117747 | HR-TB | lineage4.8 | None | ERR9786076 | Sensitive | lineage3 | None | ERR9786276 | Sensitive | lineage4.8 | None | SRR10315551 | Sensitive | lineage2.2.1 | None | ERR9787336 | Other | lineage6 | None | ERR987707 | MDR-TB | lineage4.7 | None | SRR10315558 | Sensitive | lineage2.2.1 | None | SRR1049725 | RR-TB | lineage4.1.2.1 | None | SRR10315751 | MDR-TB | lineage4.8 | None | SRR1062880 | MDR-TB | lineage4.6.1.2 | None | SRR1062928 | RR-TB | lineage4 | None | SRR1172885 | HR-TB | lineage4.9 | None | SRR10993951 | RR-TB | La1.6 | None | SRR11349145 | Pre-XDR-TB | lineage4.4.1.1.1 | None | SRR11349211 | Pre-XDR-TB | lineage4.3.3 | None | SRR11462861 | Other | La1.8.1 | None | SRR1173170 | Other | lineage4.9 | None | SRR1172987 | HR-TB | lineage4.9 | None | SRR1175512 | Sensitive | lineage4.9 | None | SRR1173281 | RR-TB | lineage3 | None | SRR1173740 | Other | None | SRR1175173 | HR-TB | lineage3.1.2.1 | None | SRR1173770 | Other | lineage4.9 | None | SRR1175052 | HR-TB | lineage4.9 | None | SRR1175487 | Sensitive | lineage4.9 | None | SRR1175506 | Sensitive | lineage4.9 | None | SRR1175513 | Other | lineage4.9 | None | SRR1180148 | Sensitive | lineage4.9 | None | SRR1181390 | Sensitive | lineage2 | None | SRR1180250 | Other | lineage4.9 | None | SRR1180300 | Sensitive | lineage4.9 | None | SRR1180319 | Sensitive | lineage4.9 | None | SRR1181237 | Sensitive | lineage2.2 | None | SRR1181349 | Sensitive | lineage4.4.1.1.1 | None | SRR1180312 | Sensitive | lineage4.9 | None | SRR1180345 | Other | lineage4.9 | None | SRR1180355 | Sensitive | lineage4.9 | None | SRR1180413 | Sensitive | lineage4.9 | None | SRR1180420 | Sensitive | lineage4.9 | None | SRR1180444 | Sensitive | lineage4.9 | None | SRR1180977 | Sensitive | lineage4.9 | None | SRR1181283 | Sensitive | lineage4.9 | None | SRR1181402 | Sensitive | lineage4.9 | None | SRR11972327 | Pre-XDR-TB | lineage2.2.1 | None | SRR1183054 | Sensitive | lineage4.9 | None | SRR11972300 | MDR-TB | lineage2.2.1 | None | SRR13888750 | Other | La2 | None | SRR11972425 | Pre-XDR-TB | lineage2.2.1 | None | SRR13423546 | Other | lineage4.4.2 | None | SRR13180204 | Sensitive | lineage3 | None | SRR21677886 | Sensitive | lineage4.9 | None | SRR15316595 | RR-TB | lineage4.4.2 | None | SRR17406768 | Sensitive | lineage1.1.2 | None | SRR18002974 | Pre-XDR-TB | lineage2.2.1 | None | SRR18002981 | Other | lineage2.2.1 | None | SRR18002998 | Pre-XDR-TB | lineage2.2.2 | None | SRR18003031 | HR-TB | lineage2.2.1 | None | SRR18213909 | Other | lineage4.1.2.1 | None | SRR21240055 | Other | lineage4.1.2.1 | None | SRR21658550 | Other | lineage1.1.1 | None | SRR14801325 | Pre-XDR-TB | lineage4.2.1 | None | SRR16156188 | HR-TB | lineage4.9 | None | SRR16156775 | Other | lineage4.9 | None | SRR16278274 | Other | La1.4 | None | SRR18003049 | Other | lineage2.2.1 | None | SRR18913742 | Sensitive | lineage3.1.3 | None | SRR18913779 | Other | lineage3 | None | SRR19303820 | RR-TB | lineage4.8 | None | SRR20632814 | Sensitive | lineage4 | None | SRR20969475 | Other | lineage1.2.1.2 | None | SRR21713567 | Sensitive | lineage4.5 | None | SRR22424778 | RR-TB | lineage2.2.1.1 | None | SRR21727760 | Other | lineage2.2.1 | None | SRR22424765 | MDR-TB | lineage4 | None | SRR22424787 | Sensitive | lineage4.9 | None |
|---|
